pycom09g19430

Cytochrome p450

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
20283714 .. 20284283
570 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g19430.1

Sequence Viewer

Length: 570 bp
ATGGACACTCTCGCTACTTTTGAACAACCTTCACCCTTTGAAGAACTAGACAAGCATGTTGGTAAAGAAAGGCTAGTGAACGAATCAGATATCAGCAATCTTGTCTACCTGCAAGCAACTGTCAAAGAAGCAATGCGTTTAAGTCCTGCTGGACCACTCTCTGCCCCAAGGGAATTCACCGAGGACGGCACGGCCGGAGGCTACCATGTTCCGAAAGGCACGTGGCTGCTGGTGAACCTGTGGAAGATGCAAACCAATCCACGGGTTTGGGCCGACCCGATGGAGTTCAAGCCGGAGAGATTTCCCACCACCCATAATAGGGGTCAGCATTTTGAGCTCATGCCTTTTGGTAGTGGTAGAAGAGCATGCCCTGGTATAACTTTTGGCCTTCAAGTGACGCTTTTGACTCTGGCTGGTTTTCTACATGCGTTTGAAGTCTCAACTCTACAAAATGCACCGGTTGATACGACCGGAAGCGTCGGACTTACGAACATGAAACTCACCCCTTTCGATGTCCTCGTCAAACCGCACTCGTCTCCCCAATCTTTATTGAATAAGTTACGCGTTTAG

Protein Analysis

190

Amino Acids

20.99

Weight (kDa)

6.59

Isoelectric Point (pI)

45.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 14 - 158 8.4e-43 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 117
AccI GTMKAC 1 cut(s) 105
AccII CGCG 1 cut(s) 564
AciI CCGC 1 cut(s) 527
AcoI YGGCCR 1 cut(s) 192
AcsI RAATTY 1 cut(s) 173
AcvI CACGTG 1 cut(s) 222
AfiI CCNNNNNNNGG 3 cut(s) 261, 318, 319
AflIII ACRYGT 1 cut(s) 562
AgeI ACCGGT 1 cut(s) 457
AgsI TTSAA 6 cut(s) 23, 41, 289, 392, 434, 553
AjnI CCWGG 1 cut(s) 370
AluBI AGCT 1 cut(s) 337
AluI AGCT 1 cut(s) 337
Alw21I GWGCWC 1 cut(s) 339
Alw26I GTCTC 2 cut(s) 442, 540
AoxI GGCC 3 cut(s) 192, 270, 385
ApeKI GCWGC 1 cut(s) 226
ApoI RAATTY 1 cut(s) 173
AsiGI ACCGGT 1 cut(s) 457
AspS9I GGNCC 2 cut(s) 152, 270
AsuHPI GGTGA 4 cut(s) 24, 169, 244, 493
AvaII GGWCC 1 cut(s) 152
BanII GRGCYC 1 cut(s) 339
BbrPI CACGTG 1 cut(s) 222
Bbv12I GWGCWC 1 cut(s) 339
BbvI GCAGC 1 cut(s) 213
BccI CCATC 1 cut(s) 274
BceAI ACGGC 2 cut(s) 202, 207
BciT130I CCWGG 1 cut(s) 372
BcoDI GTCTC 2 cut(s) 442, 540
BfaI CTAG 2 cut(s) 47, 74
BfuAI ACCTGC 1 cut(s) 117
BisI GCNGC 1 cut(s) 227
BlsI GCNGC 1 cut(s) 228
Bme1390I CCNGG 1 cut(s) 372
Bme18I GGWCC 1 cut(s) 152
BmgT120I GGNCC 2 cut(s) 152, 270
BmrFI CCNGG 1 cut(s) 372
BmsI GCATC 1 cut(s) 237
BsaAI YACGTR 1 cut(s) 222
BsaJI CCNNGG 4 cut(s) 167, 180, 260, 370
BsaWI WCCGGW 2 cut(s) 457, 470
Bsc4I CCNNNNNNNGG 3 cut(s) 261, 318, 319
Bse118I RCCGGY 1 cut(s) 457
Bse3DI GCAATG 1 cut(s) 138
BseBI CCWGG 1 cut(s) 372
BseDI CCNNGG 4 cut(s) 167, 180, 260, 370
BseLI CCNNNNNNNGG 3 cut(s) 261, 318, 319
BseMI GCAATG 1 cut(s) 138
BseX3I CGGCCG 1 cut(s) 192
BseXI GCAGC 1 cut(s) 213
Bsh1236I CGCG 1 cut(s) 564
Bsh1285I CGRYCG 2 cut(s) 195, 471
BshFI GGCC 3 cut(s) 194, 272, 387
BshTI ACCGGT 1 cut(s) 457
BsiEI CGRYCG 2 cut(s) 195, 471
BsiHKAI GWGCWC 1 cut(s) 339
BsiSI CCGG 4 cut(s) 195, 293, 458, 471
BslI CCNNNNNNNGG 3 cut(s) 261, 318, 319
BsmAI GTCTC 2 cut(s) 442, 540
BsmBI CGTCTC 1 cut(s) 540
BsnI GGCC 3 cut(s) 194, 272, 387
Bsp1286I GDGCHC 1 cut(s) 339
BspACI CCGC 1 cut(s) 527
BspANI GGCC 3 cut(s) 194, 272, 387
BspFNI CGCG 1 cut(s) 564
BspMI ACCTGC 1 cut(s) 117
BspQI GCTCTTC 1 cut(s) 355
BsrDI GCAATG 1 cut(s) 138
BsrFI RCCGGY 1 cut(s) 457
BssAI RCCGGY 1 cut(s) 457
BssECI CCNNGG 4 cut(s) 167, 180, 260, 370
BssT1I CCWWGG 1 cut(s) 167
Bst2UI CCWGG 1 cut(s) 372
Bst4CI ACNGT 1 cut(s) 121
Bst6I CTCTTC 1 cut(s) 355
BstBAI YACGTR 1 cut(s) 222
BstC8I GCNNGC 2 cut(s) 114, 367
BstDSI CCRYGG 1 cut(s) 260
BstFNI CGCG 1 cut(s) 564
BstMAI GTCTC 2 cut(s) 442, 540
BstMCI CGRYCG 2 cut(s) 195, 471
BstMWI GCNNNNNNNGC 1 cut(s) 334
BstNI CCWGG 1 cut(s) 372
BstNSI RCATGY 3 cut(s) 59, 369, 428
BstSCI CCNGG 1 cut(s) 370
BstUI CGCG 1 cut(s) 564
BstV1I GCAGC 1 cut(s) 213
BstXI CCANNNNNNTGG 1 cut(s) 267
BstZI CGGCCG 1 cut(s) 192
BsuRI GGCC 3 cut(s) 194, 272, 387
BtgI CCRYGG 1 cut(s) 260
BveI ACCTGC 1 cut(s) 117
Cac8I GCNNGC 2 cut(s) 114, 367
Cfr10I RCCGGY 1 cut(s) 457
Cfr13I GGNCC 2 cut(s) 152, 270
CseI GACGC 2 cut(s) 406, 466
CspAI ACCGGT 1 cut(s) 457
CviAII CATG 6 cut(s) 56, 206, 340, 366, 425, 493
CviJI RGCY 9 cut(s) 73, 194, 201, 226, 272, 292, 337, 387, 413
CviKI_1 RGCY 9 cut(s) 73, 194, 201, 226, 272, 292, 337, 387, 413
EaeI YGGCCR 1 cut(s) 192
EagI CGGCCG 1 cut(s) 192
Eam1104I CTCTTC 1 cut(s) 355
EarI CTCTTC 1 cut(s) 355
Ecl136II GAGCTC 1 cut(s) 337
EclXI CGGCCG 1 cut(s) 192
Eco130I CCWWGG 1 cut(s) 167
Eco24I GRGCYC 1 cut(s) 339
Eco32I GATATC 1 cut(s) 91
Eco47I GGWCC 1 cut(s) 152
Eco52I CGGCCG 1 cut(s) 192
Eco53kI GAGCTC 1 cut(s) 337
Eco72I CACGTG 1 cut(s) 222
EcoICRI GAGCTC 1 cut(s) 337
EcoRI GAATTC 1 cut(s) 173
EcoRII CCWGG 1 cut(s) 370
EcoRV GATATC 1 cut(s) 91
EcoT14I CCWWGG 1 cut(s) 167
EcoT38I GRGCYC 1 cut(s) 339
ErhI CCWWGG 1 cut(s) 167
Esp3I CGTCTC 1 cut(s) 540
FaeI CATG 6 cut(s) 59, 209, 343, 369, 428, 496
FaiI YATR 8 cut(s) 57, 207, 315, 341, 367, 377, 426, 494
FalI AAGNNNNNCTT 2 cut(s) 384, 416
FatI CATG 6 cut(s) 55, 205, 339, 365, 424, 492
FblI GTMKAC 1 cut(s) 105
Fnu4HI GCNGC 1 cut(s) 227
FriOI GRGCYC 1 cut(s) 339
Fsp4HI GCNGC 1 cut(s) 227
FspBI CTAG 2 cut(s) 47, 74
GluI GCNGC 1 cut(s) 227
HaeIII GGCC 3 cut(s) 194, 272, 387
HapII CCGG 4 cut(s) 195, 293, 458, 471
HgaI GACGC 2 cut(s) 406, 466
Hin1II CATG 6 cut(s) 59, 209, 343, 369, 428, 496
HinfI GANTC 2 cut(s) 83, 406
HpaII CCGG 4 cut(s) 195, 293, 458, 471
HphI GGTGA 4 cut(s) 24, 169, 244, 493
Hpy166II GTNNAC 3 cut(s) 79, 106, 235
Hpy188I TCNGA 3 cut(s) 88, 213, 482
Hpy8I GTNNAC 3 cut(s) 79, 106, 235
Hpy99I CGWCG 1 cut(s) 482
HpyAV CCTTC 2 cut(s) 39, 398
HpyCH4III ACNGT 1 cut(s) 121
HpyCH4IV ACGT 1 cut(s) 221
HpyCH4V TGCA 3 cut(s) 112, 250, 455
HpyF10VI GCNNNNNNNGC 1 cut(s) 334
HpySE526I ACGT 1 cut(s) 221
Hsp92II CATG 6 cut(s) 59, 209, 343, 369, 428, 496
LguI GCTCTTC 1 cut(s) 355
Lsp1109I GCAGC 1 cut(s) 213
LweI GCATC 1 cut(s) 237
MaeI CTAG 2 cut(s) 47, 74
MaeII ACGT 1 cut(s) 221
MaeIII GTNAC 2 cut(s) 394, 558
MboII GAAGA 3 cut(s) 53, 256, 372
MhlI GDGCHC 1 cut(s) 339
MluCI AATT 1 cut(s) 173
MluI ACGCGT 1 cut(s) 562
MlyI GAGTC 1 cut(s) 400
MmeI TCCRAC 1 cut(s) 460
MnlI CCTC 3 cut(s) 175, 191, 527
MseI TTAA 1 cut(s) 140
MspI CCGG 4 cut(s) 195, 293, 458, 471
MspR9I CCNGG 1 cut(s) 372
MvaI CCWGG 1 cut(s) 372
MvnI CGCG 1 cut(s) 564
MwoI GCNNNNNNNGC 1 cut(s) 334
NlaIII CATG 6 cut(s) 59, 209, 343, 369, 428, 496
NmuCI GTSAC 1 cut(s) 394
NspI RCATGY 3 cut(s) 59, 369, 428
PaeI GCATGC 1 cut(s) 369
PciSI GCTCTTC 1 cut(s) 355
PcsI WCGNNNNNNNCGW 1 cut(s) 516
PfeI GAWTC 1 cut(s) 83
PinAI ACCGGT 1 cut(s) 457
PkrI GCNGC 1 cut(s) 228
PleI GAGTC 1 cut(s) 400
PmaCI CACGTG 1 cut(s) 222
PmlI CACGTG 1 cut(s) 222
PpsI GAGTC 1 cut(s) 400
Ppu21I YACGTR 1 cut(s) 222
Psp124BI GAGCTC 1 cut(s) 339
Psp6I CCWGG 1 cut(s) 370
PspCI CACGTG 1 cut(s) 222
PspGI CCWGG 1 cut(s) 370
PspPI GGNCC 2 cut(s) 152, 270
SacI GAGCTC 1 cut(s) 339
SapI GCTCTTC 1 cut(s) 355
SaqAI TTAA 1 cut(s) 140
SatI GCNGC 1 cut(s) 227
Sau96I GGNCC 2 cut(s) 152, 270
SchI GAGTC 1 cut(s) 400
ScrFI CCNGG 1 cut(s) 372
SduI GDGCHC 1 cut(s) 339
SetI ASST 5 cut(s) 31, 111, 224, 240, 339
SfaNI GCATC 1 cut(s) 237
SinI GGWCC 1 cut(s) 152
SphI GCATGC 1 cut(s) 369
Sse9I AATT 1 cut(s) 173
SsiI CCGC 1 cut(s) 527
SspMI CTAG 2 cut(s) 47, 74
SstI GAGCTC 1 cut(s) 339
StyD4I CCNGG 1 cut(s) 370
StyI CCWWGG 1 cut(s) 167
TaaI ACNGT 1 cut(s) 121
TaiI ACGT 1 cut(s) 224
TaqI TCGA 1 cut(s) 510
TasI AATT 1 cut(s) 173
TfiI GAWTC 1 cut(s) 83
Tru1I TTAA 1 cut(s) 140
Tru9I TTAA 1 cut(s) 140
TseFI GTSAC 1 cut(s) 394
TseI GCWGC 1 cut(s) 226
Tsp45I GTSAC 1 cut(s) 394
TspDTI ATGAA 1 cut(s) 509
VpaK11BI GGWCC 1 cut(s) 152
XapI RAATTY 1 cut(s) 173
XceI RCATGY 3 cut(s) 59, 369, 428
XmiI GTMKAC 1 cut(s) 105
XspI CTAG 2 cut(s) 47, 74
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.