Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005703.1

Orthogroup ID

OG0000137

Physical Location & Seq

Genomic Coordinates Forward (+)

27690 .. 29392

Gene Structure 1703 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005703.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

atggattttctcatttcctatctcacgagccccatcacggttggattgcttgcaatagtaaccgtttcctattgtttaatctcaaggagttggagaacttccaagggcaaaacagctcctgaagccaagggtgcatggcctctatttggtcaccttcccttgttaggacggtcggccaagcctcttcacagggccttgggagccatggctaacaagtacggaccccttttcaccgtccggcttggggtgtatcaatcgttggtggtgagtagtagtgagatggctaaggagtgctttacgatcaacgacacatgcttgtcctcccgcccgaaaatggcagttgcagagcacatcggctataactatgcaatgtttgggctcgcaccctacgggccatactggcgtgaaatgcgtaagattaccactttagagttgctctccaaccgccggctcgagcagctaaaaaacattcgagtctcggaggtgaccacctttttgaaagaaatgtacaaaacttggagcaatagagcaaatgtaaacaagggcttcaacggtgaccaagtgttggtggagttaaaacaatggttcggggacctcactttaaatgtgattctcaggatggtggctggaaagcgttactctgttgctatcgacgaagaagagaagaacgaagcacgtcgagttcagaaggcagtgaaggagttctttgaccttactgggttgtttttggtgggcgatgtgattccttatcttcggtggttggatttaggtggacatgagaaagccatgaagaaaacgggaaaaaaattggatgccattgttcgaaagtgggtggaagagcataagcaaaagagagcactagaaggcaatgtagctcataattgtaaaggggagcaagacttcatagacaccatgatatcgatgcttgagggtgcggaccttggtggttttgatgcggataccgtcaacaaagctacaaccttgactatgattgcaggaggcagcgatacgaccatggtaactttaacatgggcaatagcattactgttaaacgaccgtgacaagttgaaaagagcccaagatgaactagacaccgagataggaagagagagatttgtgagtgagtcagatatgagcaagctagtctatatccaagccatagtgaaagagacgcttcggttataccctgcagcaccattatcagcaccacatgaattcaacaaggattgcaccataggtggctactttgtcccaaagggtacacggttgatcacaaacctatggaagatccaaaccgacccaaaaatgtggccggatgacccgttagggttcaagccggagagatttctaaccacccataaggatgttgatgttaagggtcaacattttgagttaattccatttggaagtggaagaagagcatgccctggactagctttcggcattcaaatggtgcaatttacattggccagcttcctacatgcgttccaagttttaactcttcccgataatgcaccaatagatatgactgagagtcttgggatcactaacgttaaggctactccacttgaagttctcatcaaacctcgtttgtctcataatctttatgaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00140 ko01100 ko04913 ko04917 ko04927 ko04934 map00140 map01100 map04913 map04917 map04927 map04934

Pfam Domains

Protein Families

p450

Protein Analysis

537

Amino Acids

60.42

Weight (kDa)

9.0

Isoelectric Point (pI)

34.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000137)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31940 AT4G31950 AT4G31970
fragaria_vesca	FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica	MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica	Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis	pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis	RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata	RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora	Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii	Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa	Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha	Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana	Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	565
AciI	CCGC	4 cut(s)	325, 445, 935, 956
AclI	AACGTT	1 cut(s)	1551
AclWI	GGATC	2 cut(s)	1282, 1550
AcoI	YGGCCR	3 cut(s)	174, 1310, 1467
AcsI	RAATTY	1 cut(s)	1214
AcuI	CTGAAG	1 cut(s)	141
AfaI	GTAC	3 cut(s)	218, 509, 1261
AfiI	CCNNNNNNNGG	7 cut(s)	37, 146, 164, 244, 334, 447, 565
AgsI	TTSAA	7 cut(s)	499, 550, 1069, 1219, 1333, 1448, 1571
AhdI	GACNNNNNGTC	1 cut(s)	1533
AjiI	CACGTC	1 cut(s)	677
AjnI	CCWGG	1 cut(s)	1426
AluBI	AGCT	7 cut(s)	116, 460, 875, 974, 1141, 1436, 1473
AluI	AGCT	7 cut(s)	116, 460, 875, 974, 1141, 1436, 1473
Alw21I	GWGCWC	2 cut(s)	351, 859
Alw26I	GTCTC	3 cut(s)	481, 1163, 1599
AlwI	GGATC	2 cut(s)	1282, 1550
AlwNI	CAGNNNCTG	1 cut(s)	119
Ama87I	CYCGRG	1 cut(s)	452
AoxI	GGCC	6 cut(s)	137, 174, 192, 392, 1310, 1467
ApeKI	GCWGC	3 cut(s)	457, 1002, 1190
ApoI	RAATTY	1 cut(s)	1214
ArsI	GACNNNNNNTTYG	2 cut(s)	478, 510
Asp700I	GAANNNNTTC	1 cut(s)	701
AspS9I	GGNCC	5 cut(s)	192, 221, 392, 592, 937
AsuHPI	GGTGA	5 cut(s)	143, 223, 277, 496, 566
AsuII	TTCGAA	1 cut(s)	823
AvaI	CYCGRG	1 cut(s)	452
AvaII	GGWCC	3 cut(s)	221, 592, 937
BalI	TGGCCA	1 cut(s)	1469
BanII	GRGCYC	3 cut(s)	32, 381, 1078
BauI	CACGAG	1 cut(s)	25
Bbv12I	GWGCWC	2 cut(s)	351, 859
BbvI	GCAGC	3 cut(s)	469, 1014, 1202
BccI	CCATC	3 cut(s)	41, 274, 613
BciT130I	CCWGG	1 cut(s)	1428
BciVI	GTATCC	1 cut(s)	952
BclI	TGATCA	1 cut(s)	1269
BcoDI	GTCTC	3 cut(s)	481, 1163, 1599
BfaI	CTAG	4 cut(s)	860, 1088, 1142, 1433
BfmI	CTRYAG	1 cut(s)	1188
BfuI	GTATCC	1 cut(s)	952
BglI	GCCNNNNNGGC	1 cut(s)	400
BisI	GCNGC	3 cut(s)	458, 1003, 1191
BlsI	GCNGC	3 cut(s)	459, 1004, 1192
Bme1390I	CCNGG	1 cut(s)	1428
Bme18I	GGWCC	3 cut(s)	221, 592, 937
BmeRI	GACNNNNNGTC	1 cut(s)	1533
BmeT110I	CYCGRG	1 cut(s)	452
BmgBI	CACGTC	1 cut(s)	677
BmgT120I	GGNCC	5 cut(s)	192, 221, 392, 592, 937
BmiI	GGNNCC	3 cut(s)	202, 223, 593
BmrFI	CCNGG	1 cut(s)	1428
BmrI	ACTGGG	1 cut(s)	726
BmsI	GCATC	3 cut(s)	802, 912, 943
BmuI	ACTGGG	1 cut(s)	726
BplI	GAGNNNNNCTC	2 cut(s)	422, 454
Bpu10I	CCTNAGC	1 cut(s)	285
Bpu14I	TTCGAA	1 cut(s)	823
BpuEI	CTTGAG	2 cut(s)	67, 947
Bsa29I	ATCGAT	1 cut(s)	920
BsaJI	CCNNGG	7 cut(s)	102, 126, 195, 204, 940, 1014, 1426
Bsc4I	CCNNNNNNNGG	7 cut(s)	37, 146, 164, 244, 334, 447, 565
Bse118I	RCCGGY	1 cut(s)	447
Bse1I	ACTGG	2 cut(s)	404, 721
Bse3DI	GCAATG	2 cut(s)	375, 874
BseBI	CCWGG	1 cut(s)	1428
BseCI	ATCGAT	1 cut(s)	920
BseDI	CCNNGG	7 cut(s)	102, 126, 195, 204, 940, 1014, 1426
BseGI	GGATG	4 cut(s)	624, 817, 1321, 1369
BseLI	CCNNNNNNNGG	7 cut(s)	37, 146, 164, 244, 334, 447, 565
BseMI	GCAATG	2 cut(s)	375, 874
BseMII	CTCAG	2 cut(s)	628, 1521
BseNI	ACTGG	2 cut(s)	404, 721
BseXI	GCAGC	3 cut(s)	469, 1014, 1202
Bsh1285I	CGRYCG	2 cut(s)	173, 1057
BshFI	GGCC	6 cut(s)	139, 176, 194, 394, 1312, 1469
BshVI	ATCGAT	1 cut(s)	920
BsiEI	CGRYCG	2 cut(s)	173, 1057
BsiHKAI	GWGCWC	2 cut(s)	351, 859
BsiHKCI	CYCGRG	1 cut(s)	452
BsiSI	CCGG	4 cut(s)	238, 448, 1313, 1337
BslFI	GGGAC	2 cut(s)	605, 1235
BslI	CCNNNNNNNGG	7 cut(s)	37, 146, 164, 244, 334, 447, 565
BsmAI	GTCTC	3 cut(s)	481, 1163, 1599
BsmBI	CGTCTC	1 cut(s)	1163
BsmFI	GGGAC	2 cut(s)	605, 1235
BsmI	GAATGC	1 cut(s)	1443
BsnI	GGCC	6 cut(s)	139, 176, 194, 394, 1312, 1469
BsoBI	CYCGRG	1 cut(s)	452
Bsp119I	TTCGAA	1 cut(s)	823
Bsp1286I	GDGCHC	5 cut(s)	32, 351, 381, 859, 1078
Bsp1407I	TGTACA	1 cut(s)	507
Bsp143I	GATC	4 cut(s)	300, 1269, 1287, 1542
Bsp19I	CCATGG	2 cut(s)	204, 1014
BspACI	CCGC	4 cut(s)	325, 445, 935, 956
BspANI	GGCC	6 cut(s)	139, 176, 194, 394, 1312, 1469
BspCNI	CTCAG	2 cut(s)	627, 1522
BspDI	ATCGAT	1 cut(s)	920
BspLI	GGNNCC	3 cut(s)	202, 223, 593
BspMAI	CTGCAG	1 cut(s)	1192
BspPI	GGATC	2 cut(s)	1282, 1550
BspQI	GCTCTTC	2 cut(s)	831, 1411
BspT104I	TTCGAA	1 cut(s)	823
BsrDI	GCAATG	2 cut(s)	375, 874
BsrFI	RCCGGY	1 cut(s)	447
BsrGI	TGTACA	1 cut(s)	507
BsrI	ACTGG	2 cut(s)	404, 721
BssAI	RCCGGY	1 cut(s)	447
BssECI	CCNNGG	7 cut(s)	102, 126, 195, 204, 940, 1014, 1426
BssMI	GATC	4 cut(s)	300, 1269, 1287, 1542
BssSI	CACGAG	1 cut(s)	25
BssT1I	CCWWGG	6 cut(s)	102, 126, 195, 204, 940, 1014
Bst2BI	CACGAG	1 cut(s)	25
Bst2UI	CCWGG	1 cut(s)	1428
Bst4CI	ACNGT	9 cut(s)	40, 64, 171, 235, 554, 964, 1047, 1058, 1266
Bst6I	CTCTTC	6 cut(s)	189, 654, 831, 1099, 1411, 1506
BstAUI	TGTACA	1 cut(s)	507
BstBI	TTCGAA	1 cut(s)	823
BstC8I	GCNNGC	6 cut(s)	51, 381, 449, 1139, 1423, 1471
BstDEI	CTNAG	3 cut(s)	285, 614, 1530
BstDSI	CCRYGG	2 cut(s)	204, 1014
BstEII	GGTNACC	3 cut(s)	149, 484, 554
BstF5I	GGATG	4 cut(s)	624, 817, 1321, 1369
BstKTI	GATC	4 cut(s)	303, 1272, 1290, 1545
BstMAI	GTCTC	3 cut(s)	481, 1163, 1599
BstMBI	GATC	4 cut(s)	300, 1269, 1287, 1542
BstMCI	CGRYCG	2 cut(s)	173, 1057
BstMWI	GCNNNNNNNGC	6 cut(s)	122, 131, 200, 400, 409, 457
BstNI	CCWGG	1 cut(s)	1428
BstNSI	RCATGY	3 cut(s)	315, 1425, 1484
BstPI	GGTNACC	3 cut(s)	149, 484, 554
BstSCI	CCNGG	1 cut(s)	1426
BstSFI	CTRYAG	1 cut(s)	1188
BstV1I	GCAGC	3 cut(s)	469, 1014, 1202
BstX2I	RGATCY	1 cut(s)	1287
BstXI	CCANNNNNNTGG	1 cut(s)	1308
BstYI	RGATCY	1 cut(s)	1287
Bsu15I	ATCGAT	1 cut(s)	920
BsuI	GTATCC	1 cut(s)	952
BsuRI	GGCC	6 cut(s)	139, 176, 194, 394, 1312, 1469
BsuTUI	ATCGAT	1 cut(s)	920
BtgI	CCRYGG	2 cut(s)	204, 1014
BtgZI	GCGATG	1 cut(s)	750
BtrI	CACGTC	1 cut(s)	677
BtsCI	GGATG	4 cut(s)	624, 817, 1321, 1369
BtsI	GCAGTG	1 cut(s)	699
BtsIMutI	CAGTG	1 cut(s)	699
Cac8I	GCNNGC	6 cut(s)	51, 381, 449, 1139, 1423, 1471
CaiI	CAGNNNCTG	1 cut(s)	119
Cfr10I	RCCGGY	1 cut(s)	447
Cfr13I	GGNCC	5 cut(s)	192, 221, 392, 592, 937
ClaI	ATCGAT	1 cut(s)	920
CseI	GACGC	1 cut(s)	1180
Csp6I	GTAC	3 cut(s)	217, 508, 1260
CviQI	GTAC	3 cut(s)	217, 508, 1260
DdeI	CTNAG	3 cut(s)	285, 614, 1530
DpnI	GATC	4 cut(s)	302, 1271, 1289, 1544
DpnII	GATC	4 cut(s)	300, 1269, 1287, 1542
DraI	TTTAAA	1 cut(s)	603
DriI	GACNNNNNGTC	1 cut(s)	1533
EaeI	YGGCCR	3 cut(s)	174, 1310, 1467
Eam1104I	CTCTTC	6 cut(s)	189, 654, 831, 1099, 1411, 1506
Eam1105I	GACNNNNNGTC	1 cut(s)	1533
EarI	CTCTTC	6 cut(s)	189, 654, 831, 1099, 1411, 1506
Eco130I	CCWWGG	6 cut(s)	102, 126, 195, 204, 940, 1014
Eco24I	GRGCYC	3 cut(s)	32, 381, 1078
Eco32I	GATATC	1 cut(s)	918
Eco47I	GGWCC	3 cut(s)	221, 592, 937
Eco57I	CTGAAG	1 cut(s)	141
Eco88I	CYCGRG	1 cut(s)	452
Eco91I	GGTNACC	3 cut(s)	149, 484, 554
EcoO109I	RGGNCCY	2 cut(s)	192, 592
EcoO65I	GGTNACC	3 cut(s)	149, 484, 554
EcoRI	GAATTC	1 cut(s)	1214
EcoRII	CCWGG	1 cut(s)	1426
EcoRV	GATATC	1 cut(s)	918
EcoT14I	CCWWGG	6 cut(s)	102, 126, 195, 204, 940, 1014
EcoT38I	GRGCYC	3 cut(s)	32, 381, 1078
ErhI	CCWWGG	6 cut(s)	102, 126, 195, 204, 940, 1014
Esp3I	CGTCTC	1 cut(s)	1163
FalI	AAGNNNNNCTT	6 cut(s)	278, 310, 689, 721, 1158, 1190
FaqI	GGGAC	2 cut(s)	605, 1235
FauI	CCCGC	1 cut(s)	332
FbaI	TGATCA	1 cut(s)	1269
Fnu4HI	GCNGC	3 cut(s)	458, 1003, 1191
FokI	GGATG	4 cut(s)	631, 824, 1328, 1376
FriOI	GRGCYC	3 cut(s)	32, 381, 1078
Fsp4HI	GCNGC	3 cut(s)	458, 1003, 1191
FspBI	CTAG	4 cut(s)	860, 1088, 1142, 1433
GluI	GCNGC	3 cut(s)	458, 1003, 1191
HaeIII	GGCC	6 cut(s)	139, 176, 194, 394, 1312, 1469
HapII	CCGG	4 cut(s)	238, 448, 1313, 1337
HgaI	GACGC	1 cut(s)	1180
HincII	GTYRAC	2 cut(s)	967, 1382
HindII	GTYRAC	2 cut(s)	967, 1382
HinfI	GANTC	5 cut(s)	474, 610, 742, 1124, 1534
HpaII	CCGG	4 cut(s)	238, 448, 1313, 1337
HphI	GGTGA	5 cut(s)	143, 223, 277, 496, 566
Hpy166II	GTNNAC	5 cut(s)	538, 773, 967, 1262, 1382
Hpy188I	TCNGA	3 cut(s)	481, 687, 1129
Hpy188III	TCNNGA	4 cut(s)	25, 119, 616, 1505
Hpy8I	GTNNAC	5 cut(s)	538, 773, 967, 1262, 1382
Hpy99I	CGWCG	2 cut(s)	656, 681
HpyAV	CCTTC	4 cut(s)	164, 682, 691, 857
HpyCH4III	ACNGT	9 cut(s)	40, 64, 171, 235, 554, 964, 1047, 1058, 1266
HpyCH4IV	ACGT	2 cut(s)	676, 1551
HpyCH4V	TGCA	9 cut(s)	53, 134, 344, 368, 995, 1190, 1230, 1456, 1514
HpyF10VI	GCNNNNNNNGC	6 cut(s)	122, 131, 200, 400, 409, 457
HpyF3I	CTNAG	3 cut(s)	285, 614, 1530
HpySE526I	ACGT	2 cut(s)	676, 1551
KroI	GCCGGC	1 cut(s)	447
KroNI	GCCGGC	1 cut(s)	449
Ksp22I	TGATCA	1 cut(s)	1269
Kzo9I	GATC	4 cut(s)	300, 1269, 1287, 1542
LguI	GCTCTTC	2 cut(s)	831, 1411
LmnI	GCTCC	4 cut(s)	121, 200, 519, 892
Lsp1109I	GCAGC	3 cut(s)	469, 1014, 1202
LweI	GCATC	3 cut(s)	802, 912, 943
MaeI	CTAG	4 cut(s)	860, 1088, 1142, 1433
MaeII	ACGT	2 cut(s)	676, 1551
MaeIII	GTNAC	7 cut(s)	58, 149, 484, 554, 635, 1018, 1058
MalI	GATC	4 cut(s)	302, 1271, 1289, 1544
MboI	GATC	4 cut(s)	300, 1269, 1287, 1542
MflI	RGATCY	1 cut(s)	1287
MhlI	GDGCHC	5 cut(s)	32, 351, 381, 859, 1078
MlsI	TGGCCA	1 cut(s)	1469
MluCI	AATT	5 cut(s)	806, 880, 1214, 1395, 1457
MluNI	TGGCCA	1 cut(s)	1469
MlyI	GAGTC	3 cut(s)	483, 1133, 1543
MmeI	TCCRAC	4 cut(s)	22, 71, 465, 741
MnlI	CCTC	8 cut(s)	150, 192, 331, 475, 605, 922, 992, 1596
Mox20I	TGGCCA	1 cut(s)	1469
MroNI	GCCGGC	1 cut(s)	447
MroXI	GAANNNNTTC	1 cut(s)	701
MscI	TGGCCA	1 cut(s)	1469
MseI	TTAA	9 cut(s)	77, 575, 602, 1025, 1049, 1374, 1394, 1496, 1554
MslI	CAYNNNNRTG	2 cut(s)	1362, 1448
Msp20I	TGGCCA	1 cut(s)	1469
MspI	CCGG	4 cut(s)	238, 448, 1313, 1337
MspR9I	CCNGG	1 cut(s)	1428
Mva1269I	GAATGC	1 cut(s)	1443
MvaI	CCWGG	1 cut(s)	1428
MwoI	GCNNNNNNNGC	6 cut(s)	122, 131, 200, 400, 409, 457
NaeI	GCCGGC	1 cut(s)	449
NcoI	CCATGG	2 cut(s)	204, 1014
NdeII	GATC	4 cut(s)	300, 1269, 1287, 1542
NgoMIV	GCCGGC	1 cut(s)	447
NlaIV	GGNNCC	3 cut(s)	202, 223, 593
NmuCI	GTSAC	4 cut(s)	149, 484, 554, 1058
NspI	RCATGY	3 cut(s)	315, 1425, 1484
NspV	TTCGAA	1 cut(s)	823
PaeI	GCATGC	1 cut(s)	1425
PaeR7I	CTCGAG	1 cut(s)	452
PciSI	GCTCTTC	2 cut(s)	831, 1411
PctI	GAATGC	1 cut(s)	1443
PdiI	GCCGGC	1 cut(s)	449
PdmI	GAANNNNTTC	1 cut(s)	701
PfeI	GAWTC	2 cut(s)	610, 742
PflMI	CCANNNNNTGG	1 cut(s)	565
PkrI	GCNGC	3 cut(s)	459, 1004, 1192
PleI	GAGTC	3 cut(s)	482, 1132, 1542
PpsI	GAGTC	3 cut(s)	482, 1132, 1542
PpuMI	RGGWCCY	1 cut(s)	592
Psp1406I	AACGTT	1 cut(s)	1551
Psp5II	RGGWCCY	1 cut(s)	592
Psp6I	CCWGG	1 cut(s)	1426
PspEI	GGTNACC	3 cut(s)	149, 484, 554
PspGI	CCWGG	1 cut(s)	1426
PspN4I	GGNNCC	3 cut(s)	202, 223, 593
PspPI	GGNCC	5 cut(s)	192, 221, 392, 592, 937
PspPPI	RGGWCCY	1 cut(s)	592
PspXI	VCTCGAGB	1 cut(s)	452
PstI	CTGCAG	1 cut(s)	1192
PstNI	CAGNNNCTG	1 cut(s)	119
PsuI	RGATCY	1 cut(s)	1287
RsaI	GTAC	3 cut(s)	218, 509, 1261
RsaNI	GTAC	3 cut(s)	217, 508, 1260
RseI	CAYNNNNRTG	2 cut(s)	1362, 1448
SapI	GCTCTTC	2 cut(s)	831, 1411
SaqAI	TTAA	9 cut(s)	77, 575, 602, 1025, 1049, 1374, 1394, 1496, 1554
SatI	GCNGC	3 cut(s)	458, 1003, 1191
Sau3AI	GATC	4 cut(s)	300, 1269, 1287, 1542
Sau96I	GGNCC	5 cut(s)	192, 221, 392, 592, 937
SchI	GAGTC	3 cut(s)	483, 1133, 1543
ScrFI	CCNGG	1 cut(s)	1428
SduI	GDGCHC	5 cut(s)	32, 351, 381, 859, 1078
SfaNI	GCATC	3 cut(s)	802, 912, 943
SfcI	CTRYAG	1 cut(s)	1188
Sfr274I	CTCGAG	1 cut(s)	452
SfuI	TTCGAA	1 cut(s)	823
SinI	GGWCC	3 cut(s)	221, 592, 937
SlaI	CTCGAG	1 cut(s)	452
SmiMI	CAYNNNNRTG	2 cut(s)	1362, 1448
SmlI	CTYRAG	3 cut(s)	82, 452, 926
SmoI	CTYRAG	3 cut(s)	82, 452, 926
SphI	GCATGC	1 cut(s)	1425
Sse9I	AATT	5 cut(s)	806, 880, 1214, 1395, 1457
SsiI	CCGC	4 cut(s)	325, 445, 935, 956
SspMI	CTAG	4 cut(s)	860, 1088, 1142, 1433
StyD4I	CCNGG	1 cut(s)	1426
StyI	CCWWGG	6 cut(s)	102, 126, 195, 204, 940, 1014
TaaI	ACNGT	9 cut(s)	40, 64, 171, 235, 554, 964, 1047, 1058, 1266
TaiI	ACGT	2 cut(s)	679, 1554
TaqI	TCGA	6 cut(s)	453, 472, 651, 679, 823, 920
TasI	AATT	5 cut(s)	806, 880, 1214, 1395, 1457
TatI	WGTACW	1 cut(s)	507
TfiI	GAWTC	2 cut(s)	610, 742
Tru1I	TTAA	9 cut(s)	77, 575, 602, 1025, 1049, 1374, 1394, 1496, 1554
Tru9I	TTAA	9 cut(s)	77, 575, 602, 1025, 1049, 1374, 1394, 1496, 1554
TscAI	CASTG	1 cut(s)	699
TseFI	GTSAC	4 cut(s)	149, 484, 554, 1058
TseI	GCWGC	3 cut(s)	457, 1002, 1190
Tsp45I	GTSAC	4 cut(s)	149, 484, 554, 1058
TspDTI	ATGAA	4 cut(s)	803, 892, 1098, 1227
TspGWI	ACGGA	1 cut(s)	234
TspRI	CASTG	1 cut(s)	699
Van91I	CCANNNNNTGG	1 cut(s)	565
VpaK11BI	GGWCC	3 cut(s)	221, 592, 937
XapI	RAATTY	1 cut(s)	1214
XceI	RCATGY	3 cut(s)	315, 1425, 1484
XhoI	CTCGAG	1 cut(s)	452
XmnI	GAANNNNTTC	1 cut(s)	701
XspI	CTAG	4 cut(s)	860, 1088, 1142, 1433

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.