MD15G1028300.v1.1

cytochrome P450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000137
Physical Location & Seq
Forward (+)
1695496 .. 1697556
2061 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1028300.v1.1.491

Sequence Viewer

Length: 1596 bp
ATGACAGTTGCAAAAATGGATTCTCTGCCTTATGCAAACTCTATCACTGCTGGCCTGTTCACAGTAATCATCGTGTTCTATTACTTATCTCGAAGATGGAGAGCTTCCAATCACGAGGGCAAATTATCACCACCAGAAGCCAAGGGTGGATGGCCTATATTTGGTCACCTTCATTTGTTCGGAGGCCCCACACCTCCTCACATAACTTTGGGAGCCATGGCGGACAAGTACGGACCCATTTTCACTATCCGCCTTGGCGTCCAACCGTCGTTGGTGATAAGCAGCAGTGAGATCGCAAAAGAATGCTACACAACCAATGACTTGAGCATACTCGGTCGCCCAAAGATGGTGGTTGCAGATCACGTTACCTACAACTATGCCATGTTTGCGTTCGGACCACCTGGACCCTATTGGCGACAAATTCGCAAGATCGTTACCTTGGAGTTGCTCTCAGTCCGGAAGGTTGAGCTGCTCAAGCACATTCGAGTGTCGGAAGTGGCTACTTTCTTAAAAGAATTGCACGACCATTGGAGTACAAAGAAAAAGGAGGGCTCGAAAGATGGAGTGGTTGTAGAGCTAAAGCAATGGTTTGGGGACATGATGCTGAACGTTATTCTTACAATGGTGGCTGGAAAGCGGTTTTCGGTGGCTGCCACTGGGGATGAGAAGAAAGAAGCGCGTAGGGTTCAGACTGCATTGAGGGAGTTCTTTGATTATCTGGGCATGTTTTTGGTGGGTGATGCGGTTCCTTATCTGCGGTGGTTGGATTGGGGTGGACATGAGAAGGCAATGAAGAAAAGTGCAACGGAAATGCACGCCATTATTGCAGAGTGGCTTGAAGAGCATAAGCAGAGGAGAGCAAAAGGTGTTGCAAAAGGAGAAAAGGACTTCATAGATTCGTTGCTTTCTGTGCTTGATGGTGCGGACCTTGGCAGTTTCGATGCTGATACGATCACCAAAGCCACAAGCGTGAATATTATTGCAGGAGGTGGCGACACCACCATGGTGCCATTGACGTGGGCAATATCATTATTGGTGAACAACCCTCAAGTTTTGAAAAAAGCTGTAAATGAACTGGACACCAAAATAGGGAAACAAAGAGTTGTGAGTGAGGAAGATATAAGCAACTTGGTCTACATCCAAGCTATTGTAAAGGAGACGTTACGTTTGTACCCAGTAGGACCATTATCAGGGCCGCGTTTATTCACCGAAGATTGCACCATTGCTGGCTACCATATCCCAAAGGGCACCCGGTTGATCCCGAACTTCTGGAAGATCCAAACTGACCCGAAAAATTGGCCTGAGCCATTCGAGTTCAAGCCAGAGAGATTTCTTACCACACACAAGGATGTTGATCTGAAGGGTCGGCATTTTCAGTTTCTTCCTTTTTCAAGTGGTAGAAGATCATGTCCTGGTTTGGCATTTGGTCTTCAACTGGTGCAATTTACATTGGCTAGTTTTCTGCATGCGTTTGAAATCTCAAATCCGTCGAGTGCACCAATTGATATGACAGAGAGTTTTGGAATAACCAACGTTAAGGCAACTCCACTTAATGTTCTCATCAAACCTCGCTTATCTTTTGAACTTTATGGATAA

Protein Analysis

532

Amino Acids

59.44

Weight (kDa)

9.13

Isoelectric Point (pI)

39.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 46 - 509 8.2e-92 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1006, 1247
AccI GTMKAC 1 cut(s) 1134
AccII CGCG 2 cut(s) 679, 1198
AccIII TCCGGA 1 cut(s) 456
AciI CCGC 7 cut(s) 221, 250, 637, 743, 757, 923, 1196
AclI AACGTT 2 cut(s) 609, 1533
AclWI GGATC 2 cut(s) 1252, 1270
AcsI RAATTY 1 cut(s) 420
AcuI CTGAAG 1 cut(s) 1379
AcyI GRCGYC 1 cut(s) 258
AfaI GTAC 3 cut(s) 230, 535, 1172
AfiI CCNNNNNNNGG 4 cut(s) 161, 346, 1089, 1190
AgsI TTSAA 7 cut(s) 839, 1057, 1318, 1392, 1433, 1475, 1583
AjiI CACGTC 1 cut(s) 1017
AjnI CCWGG 2 cut(s) 400, 1411
AleI CACNNNNGTG 2 cut(s) 968, 1004
AluBI AGCT 5 cut(s) 104, 469, 577, 1064, 1145
AluI AGCT 5 cut(s) 104, 469, 577, 1064, 1145
Alw21I GWGCWC 1 cut(s) 1498
Alw26I GTCTC 1 cut(s) 1151
Alw44I GTGCAC 1 cut(s) 1494
AlwI GGATC 2 cut(s) 1252, 1270
Aor13HI TCCGGA 1 cut(s) 456
AoxI GGCC 5 cut(s) 52, 152, 184, 1193, 1298
ApaLI GTGCAC 1 cut(s) 1494
ApeKI GCWGC 3 cut(s) 282, 469, 650
ApoI RAATTY 1 cut(s) 420
ArsI GACNNNNNNTTYG 2 cut(s) 1150, 1182
AspLEI GCGC 1 cut(s) 679
AspS9I GGNCC 7 cut(s) 185, 233, 395, 404, 925, 1181, 1193
AsuC2I CCSGG 1 cut(s) 1252
AsuHPI GGTGA 7 cut(s) 120, 158, 286, 749, 946, 1048, 1198
AvaII GGWCC 5 cut(s) 233, 395, 404, 925, 1181
BaeGI GKGCMC 2 cut(s) 1250, 1498
BaeI ACNNNNGTAYC 2 cut(s) 1154, 1187
BanI GGYRCC 2 cut(s) 1006, 1247
BanII GRGCYC 1 cut(s) 554
BauI CACGAG 1 cut(s) 113
BbsI GAAGAC 1 cut(s) 1421
Bbv12I GWGCWC 1 cut(s) 1498
BbvI GCAGC 3 cut(s) 294, 456, 637
BccI CCATC 5 cut(s) 90, 144, 340, 554, 911
BcgI CGANNNNNNTGC 2 cut(s) 274, 308
BciT130I CCWGG 2 cut(s) 402, 1413
BcnI CCSGG 1 cut(s) 1252
BcoDI GTCTC 1 cut(s) 1151
BfaI CTAG 1 cut(s) 1455
BisI GCNGC 4 cut(s) 283, 470, 651, 1196
BlsI GCNGC 4 cut(s) 284, 471, 652, 1197
Bme1390I CCNGG 3 cut(s) 402, 1252, 1413
Bme18I GGWCC 5 cut(s) 233, 395, 404, 925, 1181
BmgBI CACGTC 1 cut(s) 1017
BmgT120I GGNCC 7 cut(s) 185, 233, 395, 404, 925, 1181, 1193
BmiI GGNNCC 7 cut(s) 187, 214, 235, 406, 747, 1008, 1249
BmrFI CCNGG 3 cut(s) 402, 1252, 1413
BmrI ACTGGG 2 cut(s) 666, 1169
BmsI GCATC 3 cut(s) 591, 730, 931
BmuI ACTGGG 2 cut(s) 666, 1169
BpiI GAAGAC 1 cut(s) 1421
BplI GAGNNNNNCTC 2 cut(s) 434, 466
Bpu10I CCTNAGC 1 cut(s) 1302
BpuEI CTTGAG 3 cut(s) 343, 458, 1032
BpuMI CCSGG 1 cut(s) 1252
BsaBI GATNNNNATC 1 cut(s) 1353
BsaHI GRCGYC 1 cut(s) 258
BsaJI CCNNGG 6 cut(s) 141, 216, 253, 438, 928, 1002
BsaWI WCCGGW 1 cut(s) 456
BsaXI ACNNNNNCTCC 2 cut(s) 555, 585
Bsc4I CCNNNNNNNGG 4 cut(s) 161, 346, 1089, 1190
Bse1I ACTGG 4 cut(s) 661, 1080, 1175, 1440
Bse3DI GCAATG 3 cut(s) 590, 795, 1221
Bse8I GATNNNNATC 1 cut(s) 1353
BseAI TCCGGA 1 cut(s) 456
BseBI CCWGG 2 cut(s) 402, 1413
BseDI CCNNGG 6 cut(s) 141, 216, 253, 438, 928, 1002
BseGI GGATG 4 cut(s) 155, 667, 1137, 1354
BseJI GATNNNNATC 1 cut(s) 1353
BseLI CCNNNNNNNGG 4 cut(s) 161, 346, 1089, 1190
BseMI GCAATG 3 cut(s) 590, 795, 1221
BseMII CTCAG 2 cut(s) 465, 1293
BseNI ACTGG 4 cut(s) 661, 1080, 1175, 1440
BseRI GAGGAG 2 cut(s) 186, 868
BseSI GKGCMC 2 cut(s) 1250, 1498
BseXI GCAGC 3 cut(s) 294, 456, 637
Bsh1236I CGCG 2 cut(s) 679, 1198
Bsh1285I CGRYCG 1 cut(s) 337
BshFI GGCC 5 cut(s) 54, 154, 186, 1195, 1300
BshNI GGYRCC 2 cut(s) 1006, 1247
BsiEI CGRYCG 1 cut(s) 337
BsiHKAI GWGCWC 1 cut(s) 1498
BsiSI CCGG 2 cut(s) 457, 1252
BslFI GGGAC 1 cut(s) 608
BslI CCNNNNNNNGG 4 cut(s) 161, 346, 1089, 1190
BsmAI GTCTC 1 cut(s) 1151
BsmBI CGTCTC 1 cut(s) 1151
BsmFI GGGAC 1 cut(s) 608
BsmI GAATGC 1 cut(s) 308
BsnI GGCC 5 cut(s) 54, 154, 186, 1195, 1300
Bsp1286I GDGCHC 3 cut(s) 554, 1250, 1498
Bsp13I TCCGGA 1 cut(s) 456
Bsp143I GATC 8 cut(s) 291, 358, 429, 951, 1257, 1275, 1354, 1403
Bsp19I CCATGG 2 cut(s) 216, 1002
BspACI CCGC 7 cut(s) 221, 250, 637, 743, 757, 923, 1196
BspANI GGCC 5 cut(s) 54, 154, 186, 1195, 1300
BspCNI CTCAG 2 cut(s) 464, 1294
BspEI TCCGGA 1 cut(s) 456
BspFNI CGCG 2 cut(s) 679, 1198
BspLI GGNNCC 7 cut(s) 187, 214, 235, 406, 747, 1008, 1249
BspPI GGATC 2 cut(s) 1252, 1270
BspQI GCTCTTC 1 cut(s) 834
BspT107I GGYRCC 2 cut(s) 1006, 1247
BsrDI GCAATG 3 cut(s) 590, 795, 1221
BsrI ACTGG 4 cut(s) 661, 1080, 1175, 1440
BssECI CCNNGG 6 cut(s) 141, 216, 253, 438, 928, 1002
BssMI GATC 8 cut(s) 291, 358, 429, 951, 1257, 1275, 1354, 1403
BssNI GRCGYC 1 cut(s) 258
BssSI CACGAG 1 cut(s) 113
BssT1I CCWWGG 6 cut(s) 141, 216, 253, 438, 928, 1002
Bst2BI CACGAG 1 cut(s) 113
Bst2UI CCWGG 2 cut(s) 402, 1413
Bst4CI ACNGT 3 cut(s) 7, 64, 267
Bst6I CTCTTC 1 cut(s) 834
BstACI GRCGYC 1 cut(s) 258
BstC8I GCNNGC 4 cut(s) 52, 816, 1228, 1467
BstDEI CTNAG 2 cut(s) 451, 1302
BstDSI CCRYGG 2 cut(s) 216, 1002
BstEII GGTNACC 1 cut(s) 164
BstF5I GGATG 4 cut(s) 155, 667, 1137, 1354
BstFNI CGCG 2 cut(s) 679, 1198
BstHHI GCGC 1 cut(s) 679
BstKTI GATC 8 cut(s) 294, 361, 432, 954, 1260, 1278, 1357, 1406
BstMAI GTCTC 1 cut(s) 1151
BstMBI GATC 8 cut(s) 291, 358, 429, 951, 1257, 1275, 1354, 1403
BstMCI CGRYCG 1 cut(s) 337
BstMWI GCNNNNNNNGC 5 cut(s) 386, 475, 824, 841, 910
BstNI CCWGG 2 cut(s) 402, 1413
BstNSI RCATGY 2 cut(s) 727, 1469
BstPI GGTNACC 1 cut(s) 164
BstSCI CCNGG 3 cut(s) 400, 1250, 1411
BstSLI GKGCMC 2 cut(s) 1250, 1498
BstUI CGCG 2 cut(s) 679, 1198
BstV1I GCAGC 3 cut(s) 294, 456, 637
BstV2I GAAGAC 1 cut(s) 1421
BstX2I RGATCY 1 cut(s) 1275
BstXI CCANNNNNNTGG 1 cut(s) 1017
BstYI RGATCY 1 cut(s) 1275
BsuRI GGCC 5 cut(s) 54, 154, 186, 1195, 1300
BtgI CCRYGG 2 cut(s) 216, 1002
BtrI CACGTC 1 cut(s) 1017
BtsCI GGATG 4 cut(s) 155, 667, 1137, 1354
BtsI GCAGTG 2 cut(s) 45, 292
BtsIMutI CAGTG 3 cut(s) 45, 292, 654
Cac8I GCNNGC 4 cut(s) 52, 816, 1228, 1467
CfoI GCGC 1 cut(s) 679
Cfr13I GGNCC 7 cut(s) 185, 233, 395, 404, 925, 1181, 1193
CseI GACGC 1 cut(s) 247
Csp6I GTAC 3 cut(s) 229, 534, 1171
CspCI CAANNNNNGTGG 2 cut(s) 330, 365
CviAII CATG 8 cut(s) 217, 382, 598, 724, 779, 1003, 1407, 1466
CviQI GTAC 3 cut(s) 229, 534, 1171
DdeI CTNAG 2 cut(s) 451, 1302
DpnI GATC 8 cut(s) 293, 360, 431, 953, 1259, 1277, 1356, 1405
DpnII GATC 8 cut(s) 291, 358, 429, 951, 1257, 1275, 1354, 1403
Eam1104I CTCTTC 1 cut(s) 834
EarI CTCTTC 1 cut(s) 834
EciI GGCGGA 2 cut(s) 236, 239
Eco130I CCWWGG 6 cut(s) 141, 216, 253, 438, 928, 1002
Eco24I GRGCYC 1 cut(s) 554
Eco47I GGWCC 5 cut(s) 233, 395, 404, 925, 1181
Eco57I CTGAAG 1 cut(s) 1379
Eco91I GGTNACC 1 cut(s) 164
EcoO109I RGGNCCY 1 cut(s) 185
EcoO65I GGTNACC 1 cut(s) 164
EcoRII CCWGG 2 cut(s) 400, 1411
EcoT14I CCWWGG 6 cut(s) 141, 216, 253, 438, 928, 1002
EcoT38I GRGCYC 1 cut(s) 554
ErhI CCWWGG 6 cut(s) 141, 216, 253, 438, 928, 1002
Esp3I CGTCTC 1 cut(s) 1151
FaeI CATG 8 cut(s) 220, 385, 601, 727, 782, 1006, 1410, 1469
FaqI GGGAC 1 cut(s) 608
FatI CATG 8 cut(s) 216, 381, 597, 723, 778, 1002, 1406, 1465
FblI GTMKAC 1 cut(s) 1134
Fnu4HI GCNGC 4 cut(s) 283, 470, 651, 1196
FokI GGATG 4 cut(s) 162, 674, 1124, 1361
FriOI GRGCYC 1 cut(s) 554
Fsp4HI GCNGC 4 cut(s) 283, 470, 651, 1196
FspBI CTAG 1 cut(s) 1455
GlaI GCGC 1 cut(s) 678
GluI GCNGC 4 cut(s) 283, 470, 651, 1196
HaeIII GGCC 5 cut(s) 54, 154, 186, 1195, 1300
HapII CCGG 2 cut(s) 457, 1252
HgaI GACGC 1 cut(s) 247
HhaI GCGC 1 cut(s) 679
Hin1I GRCGYC 1 cut(s) 258
Hin1II CATG 8 cut(s) 220, 385, 601, 727, 782, 1006, 1410, 1469
Hin6I GCGC 1 cut(s) 677
HinP1I GCGC 1 cut(s) 677
HinfI GANTC 2 cut(s) 20, 896
HpaII CCGG 2 cut(s) 457, 1252
HphI GGTGA 7 cut(s) 120, 158, 286, 749, 946, 1048, 1198
Hpy166II GTNNAC 5 cut(s) 60, 776, 1039, 1135, 1496
Hpy188I TCNGA 5 cut(s) 182, 395, 493, 690, 1359
Hpy188III TCNNGA 5 cut(s) 90, 113, 457, 1261, 1270
Hpy8I GTNNAC 5 cut(s) 60, 776, 1039, 1135, 1496
Hpy99I CGWCG 2 cut(s) 271, 1492
HpyAV CCTTC 4 cut(s) 179, 454, 778, 1354
HpyCH4III ACNGT 3 cut(s) 7, 64, 267
HpyCH4IV ACGT 6 cut(s) 363, 609, 1016, 1160, 1165, 1533
HpyF10VI GCNNNNNNNGC 5 cut(s) 386, 475, 824, 841, 910
HpyF3I CTNAG 2 cut(s) 451, 1302
HpySE526I ACGT 6 cut(s) 363, 609, 1016, 1160, 1165, 1533
Hsp92I GRCGYC 1 cut(s) 258
Hsp92II CATG 8 cut(s) 220, 385, 601, 727, 782, 1006, 1410, 1469
HspAI GCGC 1 cut(s) 677
Kpn2I TCCGGA 1 cut(s) 456
Kzo9I GATC 8 cut(s) 291, 358, 429, 951, 1257, 1275, 1354, 1403
LguI GCTCTTC 1 cut(s) 834
LmnI GCTCC 1 cut(s) 212
Lsp1109I GCAGC 3 cut(s) 294, 456, 637
LweI GCATC 3 cut(s) 591, 730, 931
MaeI CTAG 1 cut(s) 1455
MaeII ACGT 6 cut(s) 363, 609, 1016, 1160, 1165, 1533
MaeIII GTNAC 4 cut(s) 164, 364, 433, 1161
MalI GATC 8 cut(s) 293, 360, 431, 953, 1259, 1277, 1356, 1405
MboI GATC 8 cut(s) 291, 358, 429, 951, 1257, 1275, 1354, 1403
MfeI CAATTG 1 cut(s) 1500
MflI RGATCY 1 cut(s) 1275
MhlI GDGCHC 3 cut(s) 554, 1250, 1498
MluCI AATT 6 cut(s) 122, 420, 515, 1294, 1442, 1500
MmeI TCCRAC 3 cut(s) 286, 471, 744
MroI TCCGGA 1 cut(s) 456
MseI TTAA 3 cut(s) 509, 1536, 1551
MslI CAYNNNNRTG 6 cut(s) 485, 968, 1001, 1004, 1015, 1347
MspI CCGG 2 cut(s) 457, 1252
MspR9I CCNGG 3 cut(s) 402, 1252, 1413
MunI CAATTG 1 cut(s) 1500
Mva1269I GAATGC 1 cut(s) 308
MvaI CCWGG 2 cut(s) 402, 1413
MvnI CGCG 2 cut(s) 679, 1198
MwoI GCNNNNNNNGC 5 cut(s) 386, 475, 824, 841, 910
NciI CCSGG 1 cut(s) 1252
NcoI CCATGG 2 cut(s) 216, 1002
NdeII GATC 8 cut(s) 291, 358, 429, 951, 1257, 1275, 1354, 1403
NlaIII CATG 8 cut(s) 220, 385, 601, 727, 782, 1006, 1410, 1469
NlaIV GGNNCC 7 cut(s) 187, 214, 235, 406, 747, 1008, 1249
NmuCI GTSAC 1 cut(s) 164
NspI RCATGY 2 cut(s) 727, 1469
OliI CACNNNNGTG 2 cut(s) 968, 1004
PaeI GCATGC 1 cut(s) 1469
PciSI GCTCTTC 1 cut(s) 834
PctI GAATGC 1 cut(s) 308
PfeI GAWTC 2 cut(s) 20, 896
PkrI GCNGC 4 cut(s) 284, 471, 652, 1197
Psp1406I AACGTT 2 cut(s) 609, 1533
Psp6I CCWGG 2 cut(s) 400, 1411
PspEI GGTNACC 1 cut(s) 164
PspGI CCWGG 2 cut(s) 400, 1411
PspN4I GGNNCC 7 cut(s) 187, 214, 235, 406, 747, 1008, 1249
PspPI GGNCC 7 cut(s) 185, 233, 395, 404, 925, 1181, 1193
PsuI RGATCY 1 cut(s) 1275
RsaI GTAC 3 cut(s) 230, 535, 1172
RsaNI GTAC 3 cut(s) 229, 534, 1171
RseI CAYNNNNRTG 6 cut(s) 485, 968, 1001, 1004, 1015, 1347
SapI GCTCTTC 1 cut(s) 834
SaqAI TTAA 3 cut(s) 509, 1536, 1551
SatI GCNGC 4 cut(s) 283, 470, 651, 1196
Sau3AI GATC 8 cut(s) 291, 358, 429, 951, 1257, 1275, 1354, 1403
Sau96I GGNCC 7 cut(s) 185, 233, 395, 404, 925, 1181, 1193
ScrFI CCNGG 3 cut(s) 402, 1252, 1413
SduI GDGCHC 3 cut(s) 554, 1250, 1498
SfaNI GCATC 3 cut(s) 591, 730, 931
SinI GGWCC 5 cut(s) 233, 395, 404, 925, 1181
SmiMI CAYNNNNRTG 6 cut(s) 485, 968, 1001, 1004, 1015, 1347
SmlI CTYRAG 3 cut(s) 322, 473, 1047
SmoI CTYRAG 3 cut(s) 322, 473, 1047
SphI GCATGC 1 cut(s) 1469
Sse9I AATT 6 cut(s) 122, 420, 515, 1294, 1442, 1500
SsiI CCGC 7 cut(s) 221, 250, 637, 743, 757, 923, 1196
SspI AATATT 1 cut(s) 976
SspMI CTAG 1 cut(s) 1455
StyD4I CCNGG 3 cut(s) 400, 1250, 1411
StyI CCWWGG 6 cut(s) 141, 216, 253, 438, 928, 1002
TaaI ACNGT 3 cut(s) 7, 64, 267
TaiI ACGT 6 cut(s) 366, 612, 1019, 1163, 1168, 1536
TaqI TCGA 6 cut(s) 91, 484, 554, 939, 1311, 1490
TaqII GACCGA 1 cut(s) 323
TasI AATT 6 cut(s) 122, 420, 515, 1294, 1442, 1500
TatI WGTACW 1 cut(s) 533
TauI GCSGC 1 cut(s) 1198
TfiI GAWTC 2 cut(s) 20, 896
Tru1I TTAA 3 cut(s) 509, 1536, 1551
Tru9I TTAA 3 cut(s) 509, 1536, 1551
TscAI CASTG 3 cut(s) 52, 292, 661
TseFI GTSAC 1 cut(s) 164
TseI GCWGC 3 cut(s) 282, 469, 650
Tsp45I GTSAC 1 cut(s) 164
TspDTI ATGAA 4 cut(s) 161, 806, 880, 1086
TspGWI ACGGA 3 cut(s) 246, 821, 1476
TspRI CASTG 3 cut(s) 52, 292, 661
VneI GTGCAC 1 cut(s) 1494
VpaK11BI GGWCC 5 cut(s) 233, 395, 404, 925, 1181
XapI RAATTY 1 cut(s) 420
XceI RCATGY 2 cut(s) 727, 1469
XmiI GTMKAC 1 cut(s) 1134
XspI CTAG 1 cut(s) 1455
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.