Prupe.1G387300_v2.0.a1

iron ion binding

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
34664239 .. 34664493
255 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G387300.1

Sequence Viewer

Length: 255 bp
ATGGAGTTGTATCTCCCATGCCTAAACACTGCCATAGCTGGAATCTTAGCCATACTTCTGTTTTCCTACTTTATCATAAAGCGATCATGCTCTGGTGCCAAAGCCAAGGGTTCCAAACCACCAAAAGTGGGAGGTGGGTGGCCTCTGTTAGGTCATCTCTACCTATTCGGAGGATCTCAGCTGCCTCACATAACTTTGGCTTCCTTGGTCGACAAATATGGACCAATCTTCACCGTCAACATTGGCATCTGTTGA

Protein Analysis

85

Amino Acids

8.94

Weight (kDa)

9.37

Isoelectric Point (pI)

41.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 95
AccI GTMKAC 1 cut(s) 210
AclWI GGATC 1 cut(s) 181
AfiI CCNNNNNNNGG 2 cut(s) 128, 149
AluBI AGCT 2 cut(s) 38, 181
AluI AGCT 2 cut(s) 38, 181
AlwI GGATC 1 cut(s) 181
AoxI GGCC 1 cut(s) 140
ApeKI GCWGC 1 cut(s) 181
AspS9I GGNCC 1 cut(s) 221
AsuHPI GGTGA 1 cut(s) 223
AvaII GGWCC 1 cut(s) 221
BanI GGYRCC 1 cut(s) 95
BbvI GCAGC 1 cut(s) 168
BisI GCNGC 1 cut(s) 182
BlsI GCNGC 1 cut(s) 183
Bme18I GGWCC 1 cut(s) 221
BmgT120I GGNCC 1 cut(s) 221
BmiI GGNNCC 2 cut(s) 97, 112
BsaJI CCNNGG 2 cut(s) 105, 204
Bsc4I CCNNNNNNNGG 2 cut(s) 128, 149
BseDI CCNNGG 2 cut(s) 105, 204
BseLI CCNNNNNNNGG 2 cut(s) 128, 149
BseMII CTCAG 1 cut(s) 191
BseXI GCAGC 1 cut(s) 168
BshFI GGCC 1 cut(s) 142
BshNI GGYRCC 1 cut(s) 95
BslI CCNNNNNNNGG 2 cut(s) 128, 149
BsnI GGCC 1 cut(s) 142
Bsp143I GATC 2 cut(s) 83, 173
BspANI GGCC 1 cut(s) 142
BspCNI CTCAG 1 cut(s) 190
BspLI GGNNCC 2 cut(s) 97, 112
BspPI GGATC 1 cut(s) 181
BspT107I GGYRCC 1 cut(s) 95
BssECI CCNNGG 2 cut(s) 105, 204
BssMI GATC 2 cut(s) 83, 173
BssT1I CCWWGG 2 cut(s) 105, 204
Bst4CI ACNGT 1 cut(s) 235
BstDEI CTNAG 2 cut(s) 46, 177
BstENI CCTNNNNNAGG 1 cut(s) 147
BstKTI GATC 2 cut(s) 86, 176
BstMBI GATC 2 cut(s) 83, 173
BstV1I GCAGC 1 cut(s) 168
BstX2I RGATCY 1 cut(s) 173
BstYI RGATCY 1 cut(s) 173
BsuRI GGCC 1 cut(s) 142
BtsI GCAGTG 1 cut(s) 27
BtsIMutI CAGTG 1 cut(s) 27
Cfr13I GGNCC 1 cut(s) 221
CviAII CATG 2 cut(s) 18, 87
CviJI RGCY 6 cut(s) 38, 50, 104, 142, 181, 200
CviKI_1 RGCY 6 cut(s) 38, 50, 104, 142, 181, 200
DdeI CTNAG 2 cut(s) 46, 177
DpnI GATC 2 cut(s) 85, 175
DpnII GATC 2 cut(s) 83, 173
Eco130I CCWWGG 2 cut(s) 105, 204
Eco47I GGWCC 1 cut(s) 221
EcoNI CCTNNNNNAGG 1 cut(s) 147
EcoT14I CCWWGG 2 cut(s) 105, 204
ErhI CCWWGG 2 cut(s) 105, 204
FaeI CATG 2 cut(s) 21, 90
FaiI YATR 7 cut(s) 19, 35, 53, 77, 88, 191, 219
FatI CATG 2 cut(s) 17, 86
FblI GTMKAC 1 cut(s) 210
Fnu4HI GCNGC 1 cut(s) 182
Fsp4HI GCNGC 1 cut(s) 182
GluI GCNGC 1 cut(s) 182
HaeIII GGCC 1 cut(s) 142
Hin1II CATG 2 cut(s) 21, 90
HincII GTYRAC 2 cut(s) 211, 238
HindII GTYRAC 2 cut(s) 211, 238
HinfI GANTC 1 cut(s) 42
HphI GGTGA 1 cut(s) 223
Hpy166II GTNNAC 2 cut(s) 211, 238
Hpy188I TCNGA 1 cut(s) 170
Hpy8I GTNNAC 2 cut(s) 211, 238
HpyCH4III ACNGT 1 cut(s) 235
HpyF3I CTNAG 2 cut(s) 46, 177
Hsp92II CATG 2 cut(s) 21, 90
Kzo9I GATC 2 cut(s) 83, 173
LpnPI CCDG 2 cut(s) 24, 78
Lsp1109I GCAGC 1 cut(s) 168
MalI GATC 2 cut(s) 85, 175
MboI GATC 2 cut(s) 83, 173
MboII GAAGA 1 cut(s) 220
MflI RGATCY 1 cut(s) 173
MnlI CCTC 4 cut(s) 125, 153, 164, 195
MspA1I CMGCKG 1 cut(s) 181
NdeII GATC 2 cut(s) 83, 173
NlaIII CATG 2 cut(s) 21, 90
NlaIV GGNNCC 2 cut(s) 97, 112
PfeI GAWTC 1 cut(s) 42
PkrI GCNGC 1 cut(s) 183
PspN4I GGNNCC 2 cut(s) 97, 112
PspPI GGNCC 1 cut(s) 221
PsuI RGATCY 1 cut(s) 173
PvuII CAGCTG 1 cut(s) 181
SalI GTCGAC 1 cut(s) 209
SatI GCNGC 1 cut(s) 182
Sau3AI GATC 2 cut(s) 83, 173
Sau96I GGNCC 1 cut(s) 221
SetI ASST 5 cut(s) 40, 136, 154, 165, 183
SgeI CNNG 6 cut(s) 30, 51, 99, 105, 118, 217
SinI GGWCC 1 cut(s) 221
StyI CCWWGG 2 cut(s) 105, 204
TaaI ACNGT 1 cut(s) 235
TaqI TCGA 1 cut(s) 210
TfiI GAWTC 1 cut(s) 42
TscAI CASTG 1 cut(s) 34
TseI GCWGC 1 cut(s) 181
TspRI CASTG 1 cut(s) 34
VpaK11BI GGWCC 1 cut(s) 221
XagI CCTNNNNNAGG 1 cut(s) 147
XmiI GTMKAC 1 cut(s) 210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.