Rroxscaffold_7G00168090

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000137
Physical Location & Seq
Reverse (-)
9009587 .. 9011794
2208 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00168090.1

Sequence Viewer

Length: 1485 bp
ATGGAAATTTTCGTTCTCCCATACCTAAATACCGGCGCTACAGCTGGGCTCTTACTTGCCATACTTGTGTTTTCCTACTTTATCCTATTTAAGAGGTCCCGAGCCAATAGGAGTCCCAAACCCCCTCAAGTCTCAGGTGGATGGCCTCTGTTAGGCCATCTCCACCTCCTTGGAGGATCCAAGCAGCTTCCCCATATAACCTTGGGAGCCTTGACTGACAAGTATGGACCAATCTTCACCATCAATATTGGCATCCACTCCACTCTTGTGTTAAATACTTGGGAAGCGGCCAAGGAATGTTTCACCACCAACGACTCGGTTGTTTCCTCCCGTCCCGCTACGATAGCTGCCAAACACTTGAGCTACAACTATGCCATGTTCGGGTTTGGCCCCTACGGTCCATACTGGCGTGAAATACGCAAGTTGACATCCCTAGAGCTACTCTCAAACAGCAGGCTCGAGCTACTCAAACATGTTCGGGTATCCGAAGTAGAGATGAGTTTGAAACAGTTATACAAGCTATGGAGCCAAAGAAAAGATACAATCAGCACCAGCACGGGCCAAGTTTCGGTGGAGATGAAGCAGTGGTTTGGGGATTTGACACTAAACGTGGTTTTAAGGATGATTGCTGGAAAGCGATACTTCAATGTCGCTGATGGTAATTTGAGCGACGAAAAAGAGGCACGACGGTGCCAAAAGGCCATGAGGGGGTTCTTCCATTTGGTGGGAGCTTTTGTGTTGGGTGATGCAGTTCCATGGCTCAAGTGGTGGGATTTAGGTGGGCAGCAGAAGGCTATGAAAGACACTGCAAAGGAACTCGATCTTATAGCAATGGAGTGGTTGGAGGAGCACAAGCATAGAAGAACAACCTTGGGGAAGGCTAAAAGCGACCAAGATTTCATGGATGTGATGCTTTCCGTCCTTGATGGATCGCATGTTGCAGGGTTTGATGCTGATACCGTCATTAAAGCAACATGTTTGGCTTTGTTATCTGGAGGCTCTGACACAACAACGGTGACCCTAACGTGGGCGCTCTCACTGCTGTTAAACAACCCCCAAGCACTGAAGAAGGTCCTTGAAGAACTAGACCATCAAGTTGGCAGAGAAAGATTAGTGAACGAATCAGATATAAACAACCTGGAGTATCTACAAGCCACTGTTAAAGAAGTAATGCGCTTATGCCCAGCTGGACCACTCTCTGGTCAGAGGGAAGTCACTGAGGACTGCACTGTTGGAGGCTACCATATCCCAAGAGGCACTTGGTTGATGGTCAACCTGTCGAAGGTCCAGACTGACCCGCGGGTTTGGGCCGACCCGATGGAGTTCAAGCCAGAGAGATTTCTCACCACCCATAAGGGTACTGATGTCAAGGGCCAGCATTTTGTGCTGATGCCATTTGGGAGTGGTCGAAGAGCTTGCCCTGGAATTACTTTTTGGACTTCAAATGACCCTTTTGTCCCTGGCTGGTTTTCTTCAAGGTTTTGA

Protein Analysis

494

Amino Acids

55.45

Weight (kDa)

8.93

Isoelectric Point (pI)

32.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 42 - 478 8.3e-81 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1454
AccB1I GGYRCC 1 cut(s) 690
AccB7I CCANNNNNTGG 2 cut(s) 724, 1199
AccII CGCG 1 cut(s) 1300
AciI CCGC 4 cut(s) 287, 336, 1298, 1300
AclWI GGATC 3 cut(s) 171, 184, 937
AcoI YGGCCR 1 cut(s) 288
AcsI RAATTY 1 cut(s) 6
AcuI CTGAAG 1 cut(s) 1085
AfaI GTAC 1 cut(s) 1360
AfiI CCNNNNNNNGG 9 cut(s) 152, 381, 568, 708, 724, 1026, 1027, 1199, 1282
AflIII ACRYGT 2 cut(s) 472, 974
AgsI TTSAA 6 cut(s) 505, 646, 1079, 1327, 1443, 1476
AjnI CCWGG 3 cut(s) 1137, 1420, 1459
AjuI GAANNNNNNNTTGG 4 cut(s) 284, 316, 1417, 1449
AleI CACNNNNGTG 2 cut(s) 266, 688
Alw21I GWGCWC 1 cut(s) 852
Alw26I GTCTC 1 cut(s) 136
AlwI GGATC 3 cut(s) 171, 184, 937
Ama87I CYCGRG 2 cut(s) 99, 458
AoxI GGCC 8 cut(s) 143, 154, 288, 388, 559, 699, 1308, 1372
ApeKI GCWGC 3 cut(s) 184, 347, 784
ApoI RAATTY 1 cut(s) 6
AspLEI GCGC 3 cut(s) 38, 1033, 1176
AsuHPI GGTGA 5 cut(s) 229, 295, 755, 1027, 1336
AvaI CYCGRG 2 cut(s) 99, 458
AvaII GGWCC 6 cut(s) 96, 227, 398, 1072, 1190, 1285
BaeI ACNNNNGTAYC 2 cut(s) 1350, 1383
BamHI GGATCC 1 cut(s) 176
BanI GGYRCC 1 cut(s) 690
BanII GRGCYC 1 cut(s) 51
Bbv12I GWGCWC 1 cut(s) 852
BbvI GCAGC 3 cut(s) 196, 334, 796
BccI CCATC 8 cut(s) 135, 165, 248, 650, 920, 1098, 1261, 1312
BcgI CGANNNNNNTGC 2 cut(s) 1398, 1432
BciT130I CCWGG 3 cut(s) 1139, 1422, 1461
BciVI GTATCC 1 cut(s) 493
BcoDI GTCTC 1 cut(s) 136
BfaI CTAG 2 cut(s) 434, 1085
BfmI CTRYAG 1 cut(s) 39
BfoI RGCGCY 2 cut(s) 39, 1034
BfuI GTATCC 1 cut(s) 493
BisI GCNGC 4 cut(s) 185, 288, 348, 785
BlsI GCNGC 4 cut(s) 186, 289, 349, 786
Bme1390I CCNGG 3 cut(s) 1139, 1422, 1461
Bme18I GGWCC 6 cut(s) 96, 227, 398, 1072, 1190, 1285
BmeT110I CYCGRG 2 cut(s) 99, 458
BmiI GGNNCC 6 cut(s) 98, 178, 208, 391, 527, 692
BmrFI CCNGG 3 cut(s) 1139, 1422, 1461
BmsI GCATC 5 cut(s) 261, 736, 900, 940, 1380
BplI GAGNNNNNCTC 2 cut(s) 428, 460
BpmI CTGGAG 2 cut(s) 1014, 1160
BpuEI CTTGAG 3 cut(s) 111, 379, 746
BsaJI CCNNGG 8 cut(s) 169, 201, 291, 755, 870, 1298, 1420, 1459
BsaXI ACNNNNNCTCC 2 cut(s) 720, 750
Bsc4I CCNNNNNNNGG 9 cut(s) 152, 381, 568, 708, 724, 1026, 1027, 1199, 1282
Bse118I RCCGGY 1 cut(s) 32
Bse1I ACTGG 1 cut(s) 410
Bse3DI GCAATG 1 cut(s) 837
BseBI CCWGG 3 cut(s) 1139, 1422, 1461
BseDI CCNNGG 8 cut(s) 169, 201, 291, 755, 870, 1298, 1420, 1459
BseGI GGATG 5 cut(s) 146, 252, 428, 627, 910
BseLI CCNNNNNNNGG 9 cut(s) 152, 381, 568, 708, 724, 1026, 1027, 1199, 1282
BseMI GCAATG 1 cut(s) 837
BseMII CTCAG 2 cut(s) 147, 1209
BseNI ACTGG 1 cut(s) 410
BseRI GAGGAG 1 cut(s) 860
BseXI GCAGC 3 cut(s) 196, 334, 796
BseYI CCCAGC 2 cut(s) 44, 1183
BsgI GTGCAG 1 cut(s) 1210
Bsh1236I CGCG 1 cut(s) 1300
BshFI GGCC 8 cut(s) 145, 156, 290, 390, 561, 701, 1310, 1374
BshNI GGYRCC 1 cut(s) 690
BsiHKAI GWGCWC 1 cut(s) 852
BsiHKCI CYCGRG 2 cut(s) 99, 458
BsiSI CCGG 1 cut(s) 33
BslFI GGGAC 4 cut(s) 82, 99, 318, 1442
BslI CCNNNNNNNGG 9 cut(s) 152, 381, 568, 708, 724, 1026, 1027, 1199, 1282
BsmAI GTCTC 1 cut(s) 136
BsmFI GGGAC 4 cut(s) 82, 99, 318, 1442
BsnI GGCC 8 cut(s) 145, 156, 290, 390, 561, 701, 1310, 1374
BsoBI CYCGRG 2 cut(s) 99, 458
Bsp1286I GDGCHC 2 cut(s) 51, 852
Bsp143I GATC 3 cut(s) 176, 820, 929
Bsp19I CCATGG 1 cut(s) 755
BspACI CCGC 4 cut(s) 287, 336, 1298, 1300
BspANI GGCC 8 cut(s) 145, 156, 290, 390, 561, 701, 1310, 1374
BspCNI CTCAG 2 cut(s) 146, 1210
BspFNI CGCG 1 cut(s) 1300
BspLI GGNNCC 6 cut(s) 98, 178, 208, 391, 527, 692
BspPI GGATC 3 cut(s) 171, 184, 937
BspQI GCTCTTC 1 cut(s) 1405
BspT107I GGYRCC 1 cut(s) 690
BsrDI GCAATG 1 cut(s) 837
BsrFI RCCGGY 1 cut(s) 32
BsrI ACTGG 1 cut(s) 410
BssAI RCCGGY 1 cut(s) 32
BssECI CCNNGG 8 cut(s) 169, 201, 291, 755, 870, 1298, 1420, 1459
BssMI GATC 3 cut(s) 176, 820, 929
BssT1I CCWWGG 5 cut(s) 169, 201, 291, 755, 870
Bst2UI CCWGG 3 cut(s) 1139, 1422, 1461
Bst4CI ACNGT 7 cut(s) 398, 510, 690, 961, 1015, 1159, 1231
Bst6I CTCTTC 1 cut(s) 1405
BstAPI GCANNNNNTGC 1 cut(s) 1384
BstC8I GCNNGC 3 cut(s) 455, 1376, 1417
BstDEI CTNAG 2 cut(s) 133, 1218
BstDSI CCRYGG 2 cut(s) 755, 1298
BstEII GGTNACC 1 cut(s) 1015
BstENI CCTNNNNNAGG 2 cut(s) 150, 1280
BstF5I GGATG 5 cut(s) 146, 252, 428, 627, 910
BstFNI CGCG 1 cut(s) 1300
BstH2I RGCGCY 2 cut(s) 39, 1034
BstHHI GCGC 3 cut(s) 38, 1033, 1176
BstKTI GATC 3 cut(s) 179, 823, 932
BstMAI GTCTC 1 cut(s) 136
BstMBI GATC 3 cut(s) 176, 820, 929
BstMWI GCNNNNNNNGC 3 cut(s) 344, 1039, 1384
BstNI CCWGG 3 cut(s) 1139, 1422, 1461
BstNSI RCATGY 3 cut(s) 476, 938, 978
BstPI GGTNACC 1 cut(s) 1015
BstSCI CCNGG 3 cut(s) 1137, 1420, 1459
BstSFI CTRYAG 1 cut(s) 39
BstUI CGCG 1 cut(s) 1300
BstV1I GCAGC 3 cut(s) 196, 334, 796
BstX2I RGATCY 1 cut(s) 176
BstXI CCANNNNNNTGG 2 cut(s) 170, 1097
BstYI RGATCY 1 cut(s) 176
BsuI GTATCC 1 cut(s) 493
BsuRI GGCC 8 cut(s) 145, 156, 290, 390, 561, 701, 1310, 1374
BtgI CCRYGG 2 cut(s) 755, 1298
BtsCI GGATG 5 cut(s) 146, 252, 428, 627, 910
BtsI GCAGTG 3 cut(s) 590, 804, 1037
BtsIMutI CAGTG 7 cut(s) 590, 804, 1037, 1061, 1155, 1215, 1227
Cac8I GCNNGC 3 cut(s) 455, 1376, 1417
CfoI GCGC 3 cut(s) 38, 1033, 1176
Cfr10I RCCGGY 1 cut(s) 32
Cfr42I CCGCGG 1 cut(s) 1301
Csp6I GTAC 1 cut(s) 1359
CviAII CATG 7 cut(s) 376, 473, 703, 756, 901, 935, 975
CviQI GTAC 1 cut(s) 1359
DdeI CTNAG 2 cut(s) 133, 1218
DpnI GATC 3 cut(s) 178, 822, 931
DpnII GATC 3 cut(s) 176, 820, 929
DrdI GACNNNNNNGTC 1 cut(s) 1454
DseDI GACNNNNNNGTC 1 cut(s) 1454
EaeI YGGCCR 1 cut(s) 288
Eam1104I CTCTTC 1 cut(s) 1405
EarI CTCTTC 1 cut(s) 1405
Eco130I CCWWGG 5 cut(s) 169, 201, 291, 755, 870
Eco24I GRGCYC 1 cut(s) 51
Eco47I GGWCC 6 cut(s) 96, 227, 398, 1072, 1190, 1285
Eco57I CTGAAG 1 cut(s) 1085
Eco88I CYCGRG 2 cut(s) 99, 458
Eco91I GGTNACC 1 cut(s) 1015
EcoNI CCTNNNNNAGG 2 cut(s) 150, 1280
EcoO109I RGGNCCY 2 cut(s) 96, 1072
EcoO65I GGTNACC 1 cut(s) 1015
EcoRII CCWGG 3 cut(s) 1137, 1420, 1459
EcoT14I CCWWGG 5 cut(s) 169, 201, 291, 755, 870
EcoT38I GRGCYC 1 cut(s) 51
ErhI CCWWGG 5 cut(s) 169, 201, 291, 755, 870
FaeI CATG 7 cut(s) 379, 476, 706, 759, 904, 938, 978
FalI AAGNNNNNCTT 4 cut(s) 626, 658, 1243, 1275
FaqI GGGAC 4 cut(s) 82, 99, 318, 1442
FatI CATG 7 cut(s) 375, 472, 702, 755, 900, 934, 974
FauI CCCGC 3 cut(s) 343, 1293, 1305
Fnu4HI GCNGC 4 cut(s) 185, 288, 348, 785
FokI GGATG 5 cut(s) 153, 239, 415, 634, 917
FriOI GRGCYC 1 cut(s) 51
Fsp4HI GCNGC 4 cut(s) 185, 288, 348, 785
FspBI CTAG 2 cut(s) 434, 1085
GlaI GCGC 3 cut(s) 37, 1032, 1175
GluI GCNGC 4 cut(s) 185, 288, 348, 785
GsaI CCCAGC 2 cut(s) 48, 1187
GsuI CTGGAG 2 cut(s) 1014, 1160
HaeII RGCGCY 2 cut(s) 39, 1034
HaeIII GGCC 8 cut(s) 145, 156, 290, 390, 561, 701, 1310, 1374
HapII CCGG 1 cut(s) 33
HhaI GCGC 3 cut(s) 38, 1033, 1176
Hin1II CATG 7 cut(s) 379, 476, 706, 759, 904, 938, 978
Hin6I GCGC 3 cut(s) 36, 1031, 1174
HinP1I GCGC 3 cut(s) 36, 1031, 1174
HincII GTYRAC 2 cut(s) 426, 1273
HindII GTYRAC 2 cut(s) 426, 1273
HinfI GANTC 3 cut(s) 112, 314, 1121
HpaII CCGG 1 cut(s) 33
HphI GGTGA 5 cut(s) 229, 295, 755, 1027, 1336
Hpy166II GTNNAC 3 cut(s) 426, 1117, 1273
Hpy188I TCNGA 4 cut(s) 487, 1003, 1126, 1206
Hpy188III TCNNGA 3 cut(s) 99, 993, 1288
Hpy8I GTNNAC 3 cut(s) 426, 1117, 1273
Hpy99I CGWCG 2 cut(s) 674, 690
HpyAV CCTTC 4 cut(s) 784, 871, 1063, 1276
HpyCH4III ACNGT 7 cut(s) 398, 510, 690, 961, 1015, 1159, 1231
HpyCH4IV ACGT 2 cut(s) 609, 1025
HpyCH4V TGCA 4 cut(s) 749, 809, 941, 1227
HpyF10VI GCNNNNNNNGC 3 cut(s) 344, 1039, 1384
HpyF3I CTNAG 2 cut(s) 133, 1218
HpySE526I ACGT 2 cut(s) 609, 1025
Hsp92II CATG 7 cut(s) 379, 476, 706, 759, 904, 938, 978
HspAI GCGC 3 cut(s) 36, 1031, 1174
KspI CCGCGG 1 cut(s) 1301
Kzo9I GATC 3 cut(s) 176, 820, 929
LguI GCTCTTC 1 cut(s) 1405
LmnI GCTCC 4 cut(s) 206, 525, 728, 847
Lsp1109I GCAGC 3 cut(s) 196, 334, 796
LweI GCATC 5 cut(s) 261, 736, 900, 940, 1380
MaeI CTAG 2 cut(s) 434, 1085
MaeII ACGT 2 cut(s) 609, 1025
MaeIII GTNAC 2 cut(s) 1015, 1213
MalI GATC 3 cut(s) 178, 822, 931
MboI GATC 3 cut(s) 176, 820, 929
MboII GAAGA 7 cut(s) 226, 706, 873, 1078, 1091, 1422, 1464
MflI RGATCY 1 cut(s) 176
MhlI GDGCHC 2 cut(s) 51, 852
MluCI AATT 3 cut(s) 6, 661, 1425
MlyI GAGTC 2 cut(s) 121, 308
MmeI TCCRAC 2 cut(s) 822, 1213
MseI TTAA 6 cut(s) 90, 272, 617, 966, 1046, 1161
MslI CAYNNNNRTG 4 cut(s) 65, 266, 688, 905
MspA1I CMGCKG 3 cut(s) 44, 1187, 1300
MspI CCGG 1 cut(s) 33
MspR9I CCNGG 3 cut(s) 1139, 1422, 1461
MvaI CCWGG 3 cut(s) 1139, 1422, 1461
MvnI CGCG 1 cut(s) 1300
MwoI GCNNNNNNNGC 3 cut(s) 344, 1039, 1384
NcoI CCATGG 1 cut(s) 755
NdeII GATC 3 cut(s) 176, 820, 929
NlaIII CATG 7 cut(s) 379, 476, 706, 759, 904, 938, 978
NlaIV GGNNCC 6 cut(s) 98, 178, 208, 391, 527, 692
NmuCI GTSAC 2 cut(s) 1015, 1213
NspI RCATGY 3 cut(s) 476, 938, 978
OliI CACNNNNGTG 2 cut(s) 266, 688
PaeR7I CTCGAG 1 cut(s) 458
PciI ACATGT 2 cut(s) 472, 974
PciSI GCTCTTC 1 cut(s) 1405
PfeI GAWTC 1 cut(s) 1121
PflMI CCANNNNNTGG 2 cut(s) 724, 1199
PkrI GCNGC 4 cut(s) 186, 289, 349, 786
PleI GAGTC 2 cut(s) 120, 308
PpsI GAGTC 2 cut(s) 120, 308
PpuMI RGGWCCY 2 cut(s) 96, 1072
PscI ACATGT 2 cut(s) 472, 974
Psp5II RGGWCCY 2 cut(s) 96, 1072
Psp6I CCWGG 3 cut(s) 1137, 1420, 1459
PspEI GGTNACC 1 cut(s) 1015
PspFI CCCAGC 2 cut(s) 44, 1183
PspGI CCWGG 3 cut(s) 1137, 1420, 1459
PspN4I GGNNCC 6 cut(s) 98, 178, 208, 391, 527, 692
PspPPI RGGWCCY 2 cut(s) 96, 1072
PspXI VCTCGAGB 1 cut(s) 458
PsuI RGATCY 1 cut(s) 176
PvuII CAGCTG 2 cut(s) 44, 1187
RsaI GTAC 1 cut(s) 1360
RsaNI GTAC 1 cut(s) 1359
RseI CAYNNNNRTG 4 cut(s) 65, 266, 688, 905
SacII CCGCGG 1 cut(s) 1301
SapI GCTCTTC 1 cut(s) 1405
SaqAI TTAA 6 cut(s) 90, 272, 617, 966, 1046, 1161
SatI GCNGC 4 cut(s) 185, 288, 348, 785
Sau3AI GATC 3 cut(s) 176, 820, 929
SchI GAGTC 2 cut(s) 121, 308
ScrFI CCNGG 3 cut(s) 1139, 1422, 1461
SduI GDGCHC 2 cut(s) 51, 852
SfaNI GCATC 5 cut(s) 261, 736, 900, 940, 1380
SfcI CTRYAG 1 cut(s) 39
Sfr274I CTCGAG 1 cut(s) 458
Sfr303I CCGCGG 1 cut(s) 1301
SgrBI CCGCGG 1 cut(s) 1301
SinI GGWCC 6 cut(s) 96, 227, 398, 1072, 1190, 1285
SlaI CTCGAG 1 cut(s) 458
SmiMI CAYNNNNRTG 4 cut(s) 65, 266, 688, 905
SmlI CTYRAG 4 cut(s) 126, 358, 458, 761
SmoI CTYRAG 4 cut(s) 126, 358, 458, 761
Sse9I AATT 3 cut(s) 6, 661, 1425
SsiI CCGC 4 cut(s) 287, 336, 1298, 1300
SspI AATATT 1 cut(s) 247
SspMI CTAG 2 cut(s) 434, 1085
StyD4I CCNGG 3 cut(s) 1137, 1420, 1459
StyI CCWWGG 5 cut(s) 169, 201, 291, 755, 870
TaaI ACNGT 7 cut(s) 398, 510, 690, 961, 1015, 1159, 1231
TaiI ACGT 2 cut(s) 612, 1028
TaqI TCGA 4 cut(s) 459, 819, 1280, 1408
TasI AATT 3 cut(s) 6, 661, 1425
TauI GCSGC 1 cut(s) 290
TfiI GAWTC 1 cut(s) 1121
Tru1I TTAA 6 cut(s) 90, 272, 617, 966, 1046, 1161
Tru9I TTAA 6 cut(s) 90, 272, 617, 966, 1046, 1161
TscAI CASTG 7 cut(s) 590, 811, 1044, 1068, 1162, 1222, 1234
TseFI GTSAC 2 cut(s) 1015, 1213
TseI GCWGC 3 cut(s) 184, 347, 784
Tsp45I GTSAC 2 cut(s) 1015, 1213
TspDTI ATGAA 3 cut(s) 593, 812, 889
TspGWI ACGGA 1 cut(s) 907
TspRI CASTG 7 cut(s) 590, 811, 1044, 1068, 1162, 1222, 1234
Van91I CCANNNNNTGG 2 cut(s) 724, 1199
VpaK11BI GGWCC 6 cut(s) 96, 227, 398, 1072, 1190, 1285
XagI CCTNNNNNAGG 2 cut(s) 150, 1280
XapI RAATTY 1 cut(s) 6
XceI RCATGY 3 cut(s) 476, 938, 978
XcmI CCANNNNNNNNNTGG 2 cut(s) 762, 1257
XhoI CTCGAG 1 cut(s) 458
XspI CTAG 2 cut(s) 434, 1085
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.