Rh6CG421000

cytochrome P450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0000137
Physical Location & Seq
Forward (+)
60415265 .. 60419764
4500 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG421000.1

Sequence Viewer

Length: 1605 bp
ATGGATCATCTCCTTGCTTATGTGAACTTATATGTCACGGCGGGATTAATCTTCGCAATAACAATCGTCCTATATTTCTATTATTTTTCGCAGAGAAGGACATGGAGAGCTTCCGCTAAGCGCAGATTAGCACCTCAAGCCAAGGGAGCATGGCCCGTGCTTGGCCACCTTCCGTTGCTAGGAGGATCCACACCTCCCCAGATCATCCTGGGAGCCATGGCTGACAAGTATGGTCCCCTTTTTACTATACGCCTTGGAATCTATCCAACTTTGGTGGTGAGCAGTAGTGAAATGGCTAAGGAATGCTTTACAATCCATGACATGGCTGCGTCCTCGCGCCCCAAAATGGCAGCTGTGGAACTCATGGGATACAACTATGCCATGTTTGGATTTGCACCCTCCGGACCATATTGGCGAGAAGTGCGTAAACTAGCAACCTTGGGGTTGCTCTCCAACCGCCGGATTCAGTTGCTTAAAGACATTCGAATCTCCGAAGTGGCTAGCTTCCTGAAAGAATTGTACAATACTGCTTGGAGTGCAAGTAGTACTACAGATCATAACCATATAGCTTTGGTCGAGTTGAAACAATGGTTTGGGGACTTGACTCTTAACGTTATACTTAGAATGGTAGCTGGAAAACGCTACTCATTCATAAGTGATTCCGCGAATGATGATGAGAAGAAAGAAGCGGGTCGCGTGCAGGATGCAGTGAGGAAGTTATTTTACTTTACCGGGGTGTTTTTGGTGGGTGACTCGGTTCCTTACCTTCGGTGGTTGGATTTAGGTGGTCATGAAAAGGCCATGAAGAAAACTGCAAAAGAAATCGATGCCATTCTTGGGGAGTGGATACAAGAGCATAAGCAAAGGAGAAGAGCAGGTGACACCGGGGATCATGACTTCATGGACGCCATGCTTACTGTGCTTCAAGGTGAAGACCTTGGCGATTACGATGCGGATACAGTCAACAAAGCCACAAGCTTGGATTTGATTTTAGGAGGTAGCGACACCACCATGGCTACATTGACATGGGCAGTATCACTATTATTGAACAATCGTCAAGTATTGAAACAGGCTCAAGATGAATTGGATGCAGAAGTCGGCAGAGAAAAAATTGTGAGCGAGTCGGACACAAGCAAGCTAGTGTATATCCAAGCCATAGTGAAAGAAACGCTGCGCTTATACCCTGCAGTACCATTATCAGCACAGCATGAGTTCACGGAGGACTGCACCGTGAATGGCTATCACGTCGAAAAGGGGACCCGCTTGATCACGAACCTTTGGAAGATTCAAACCAATCCACGAATCTGGCCTGACCCATTAGAATTCAAACCGGAGAGATTTCTCACCACTCACATGAACATGGATGTTAGGGGTCAGCATTTTGAACTAATCCCTTTCGGAAGTGGTAGAAGATCTTGTCCTGGGTTATCGTTTGCTCTTCAGATGGTACAATTTACTTTGGCTAGCTTTTTACATGCATTCGAAATCTCAACACCATCCAATGAGCTCGTTGATATGTCTGAGAGTTTTGGACTCACAAATGTTAAGGCCACCCCACTCAAAGTTTTCATCAAACCTCGCTTATGTACTAAACTTTATGAATAA

Protein Analysis

534

Amino Acids

60.19

Weight (kDa)

7.7

Isoelectric Point (pI)

38.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 45 - 511 9.4e-88 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 866
Acc36I ACCTGC 1 cut(s) 866
AccB7I CCANNNNNTGG 1 cut(s) 322
AccII CGCG 3 cut(s) 337, 665, 696
AccIII TCCGGA 1 cut(s) 401
AciI CCGC 7 cut(s) 41, 114, 457, 663, 689, 953, 1261
AclI AACGTT 1 cut(s) 612
AclWI GGATC 4 cut(s) 12, 180, 193, 897
AcoI YGGCCR 1 cut(s) 163
AcsI RAATTY 1 cut(s) 1322
AcuI CTGAAG 1 cut(s) 1424
AcyI GRCGYC 1 cut(s) 906
AfaI GTAC 5 cut(s) 521, 547, 1191, 1449, 1588
AfiI CCNNNNNNNGG 6 cut(s) 161, 179, 322, 346, 459, 837
AgsI TTSAA 7 cut(s) 583, 926, 1048, 1066, 1289, 1327, 1385
AjiI CACGTC 1 cut(s) 1246
AjnI CCWGG 2 cut(s) 207, 1420
AluBI AGCT 9 cut(s) 110, 353, 504, 569, 632, 978, 1138, 1467, 1507
AluI AGCT 9 cut(s) 110, 353, 504, 569, 632, 978, 1138, 1467, 1507
Alw21I GWGCWC 1 cut(s) 1509
AlwI GGATC 4 cut(s) 12, 180, 193, 897
Aor13HI TCCGGA 1 cut(s) 401
AoxI GGCC 5 cut(s) 152, 163, 798, 1307, 1548
ApeKI GCWGC 3 cut(s) 326, 350, 1171
ApoI RAATTY 1 cut(s) 1322
AseI ATTAAT 1 cut(s) 47
AspLEI GCGC 3 cut(s) 123, 339, 1176
AspS9I GGNCC 4 cut(s) 153, 233, 404, 1257
AsuC2I CCSGG 2 cut(s) 733, 886
AsuHPI GGTGA 5 cut(s) 289, 761, 890, 941, 1336
AsuII TTCGAA 2 cut(s) 484, 1482
AsuNHI GCTAGC 2 cut(s) 500, 1463
AvaII GGWCC 3 cut(s) 233, 404, 1257
BalI TGGCCA 1 cut(s) 165
BamHI GGATCC 1 cut(s) 185
BanII GRGCYC 1 cut(s) 1509
BarI GAAGNNNNNNTAC 2 cut(s) 707, 739
BbsI GAAGAC 1 cut(s) 939
Bbv12I GWGCWC 1 cut(s) 1509
BbvI GCAGC 3 cut(s) 313, 362, 1158
BccI CCATC 2 cut(s) 1438, 1504
BceAI ACGGC 1 cut(s) 54
BcgI CGANNNNNNTGC 2 cut(s) 932, 966
BciT130I CCWGG 2 cut(s) 209, 1422
BciVI GTATCC 3 cut(s) 362, 840, 949
BclI TGATCA 1 cut(s) 1266
BcnI CCSGG 2 cut(s) 733, 886
BfaI CTAG 5 cut(s) 179, 431, 501, 1139, 1464
BfmI CTRYAG 2 cut(s) 549, 1185
BfuAI ACCTGC 1 cut(s) 866
BfuI GTATCC 3 cut(s) 362, 840, 949
BglII AGATCT 1 cut(s) 1412
BisI GCNGC 3 cut(s) 327, 351, 1172
BlpI GCTNAGC 1 cut(s) 117
BlsI GCNGC 3 cut(s) 328, 352, 1173
BmcAI AGTACT 1 cut(s) 547
Bme1390I CCNGG 4 cut(s) 209, 733, 886, 1422
Bme18I GGWCC 3 cut(s) 233, 404, 1257
BmgBI CACGTC 1 cut(s) 1246
BmgT120I GGNCC 4 cut(s) 153, 233, 404, 1257
BmiI GGNNCC 6 cut(s) 187, 214, 235, 759, 1258, 1259
BmrFI CCNGG 4 cut(s) 209, 733, 886, 1422
BmsI GCATC 4 cut(s) 694, 817, 940, 1078
BmtI GCTAGC 2 cut(s) 504, 1467
BpiI GAAGAC 1 cut(s) 939
Bpu10I CCTNAGC 1 cut(s) 297
Bpu1102I GCTNAGC 1 cut(s) 117
Bpu14I TTCGAA 2 cut(s) 484, 1482
BpuEI CTTGAG 2 cut(s) 120, 1059
BpuMI CCSGG 2 cut(s) 733, 886
Bsa29I ATCGAT 1 cut(s) 825
BsaHI GRCGYC 1 cut(s) 906
BsaWI WCCGGW 2 cut(s) 401, 1330
BsaXI ACNNNNNCTCC 2 cut(s) 526, 556
Bsc4I CCNNNNNNNGG 6 cut(s) 161, 179, 322, 346, 459, 837
BseAI TCCGGA 1 cut(s) 401
BseBI CCWGG 2 cut(s) 209, 1422
BseCI ATCGAT 1 cut(s) 825
BseGI GGATG 5 cut(s) 204, 709, 1093, 1369, 1496
BseLI CCNNNNNNNGG 6 cut(s) 161, 179, 322, 346, 459, 837
BseMII CTCAG 1 cut(s) 1512
BseXI GCAGC 3 cut(s) 313, 362, 1158
BsgI GTGCAG 2 cut(s) 719, 1210
Bsh1236I CGCG 3 cut(s) 337, 665, 696
BshFI GGCC 5 cut(s) 154, 165, 800, 1309, 1550
BshVI ATCGAT 1 cut(s) 825
BsiHKAI GWGCWC 1 cut(s) 1509
BsiSI CCGG 5 cut(s) 402, 460, 732, 885, 1331
BslFI GGGAC 3 cut(s) 219, 611, 1270
BslI CCNNNNNNNGG 6 cut(s) 161, 179, 322, 346, 459, 837
BsmFI GGGAC 3 cut(s) 219, 611, 1270
BsmI GAATGC 2 cut(s) 308, 1478
BsnI GGCC 5 cut(s) 154, 165, 800, 1309, 1550
Bsp119I TTCGAA 2 cut(s) 484, 1482
Bsp1286I GDGCHC 1 cut(s) 1509
Bsp13I TCCGGA 1 cut(s) 401
Bsp1407I TGTACA 1 cut(s) 519
Bsp143I GATC 7 cut(s) 4, 185, 201, 553, 889, 1266, 1412
Bsp1720I GCTNAGC 1 cut(s) 117
Bsp19I CCATGG 2 cut(s) 216, 1011
BspACI CCGC 7 cut(s) 41, 114, 457, 663, 689, 953, 1261
BspANI GGCC 5 cut(s) 154, 165, 800, 1309, 1550
BspCNI CTCAG 1 cut(s) 1513
BspDI ATCGAT 1 cut(s) 825
BspEI TCCGGA 1 cut(s) 401
BspFNI CGCG 3 cut(s) 337, 665, 696
BspHI TCATGA 2 cut(s) 790, 892
BspLI GGNNCC 6 cut(s) 187, 214, 235, 759, 1258, 1259
BspMAI CTGCAG 1 cut(s) 1189
BspMI ACCTGC 1 cut(s) 866
BspOI GCTAGC 2 cut(s) 504, 1467
BspPI GGATC 4 cut(s) 12, 180, 193, 897
BspQI GCTCTTC 2 cut(s) 865, 1443
BspT104I TTCGAA 2 cut(s) 484, 1482
BsrGI TGTACA 1 cut(s) 519
BssMI GATC 7 cut(s) 4, 185, 201, 553, 889, 1266, 1412
BssNI GRCGYC 1 cut(s) 906
BssT1I CCWWGG 6 cut(s) 141, 216, 253, 438, 937, 1011
Bst2UI CCWGG 2 cut(s) 209, 1422
Bst4CI ACNGT 3 cut(s) 919, 961, 1231
Bst6I CTCTTC 2 cut(s) 865, 1443
BstACI GRCGYC 1 cut(s) 906
BstAUI TGTACA 1 cut(s) 519
BstBI TTCGAA 2 cut(s) 484, 1482
BstC8I GCNNGC 4 cut(s) 502, 698, 1136, 1465
BstDEI CTNAG 4 cut(s) 117, 297, 620, 1521
BstDSI CCRYGG 2 cut(s) 216, 1011
BstF5I GGATG 5 cut(s) 204, 709, 1093, 1369, 1496
BstFNI CGCG 3 cut(s) 337, 665, 696
BstHHI GCGC 3 cut(s) 123, 339, 1176
BstKTI GATC 7 cut(s) 7, 188, 204, 556, 892, 1269, 1415
BstMBI GATC 7 cut(s) 4, 185, 201, 553, 889, 1266, 1412
BstMWI GCNNNNNNNGC 5 cut(s) 137, 146, 421, 536, 919
BstNI CCWGG 2 cut(s) 209, 1422
BstNSI RCATGY 1 cut(s) 1478
BstSCI CCNGG 4 cut(s) 207, 731, 884, 1420
BstSFI CTRYAG 2 cut(s) 549, 1185
BstUI CGCG 3 cut(s) 337, 665, 696
BstV1I GCAGC 3 cut(s) 313, 362, 1158
BstV2I GAAGAC 1 cut(s) 939
BstX2I RGATCY 2 cut(s) 185, 1412
BstXI CCANNNNNNTGG 2 cut(s) 979, 1305
BstYI RGATCY 2 cut(s) 185, 1412
Bsu15I ATCGAT 1 cut(s) 825
BsuI GTATCC 3 cut(s) 362, 840, 949
BsuRI GGCC 5 cut(s) 154, 165, 800, 1309, 1550
BsuTUI ATCGAT 1 cut(s) 825
BtgI CCRYGG 2 cut(s) 216, 1011
BtrI CACGTC 1 cut(s) 1246
BtsCI GGATG 5 cut(s) 204, 709, 1093, 1369, 1496
BtsI GCAGTG 1 cut(s) 714
BtsIMutI CAGTG 1 cut(s) 714
BveI ACCTGC 1 cut(s) 866
Cac8I GCNNGC 4 cut(s) 502, 698, 1136, 1465
CciI TCATGA 2 cut(s) 790, 892
CfoI GCGC 3 cut(s) 123, 339, 1176
Cfr13I GGNCC 4 cut(s) 153, 233, 404, 1257
ClaI ATCGAT 1 cut(s) 825
CseI GACGC 2 cut(s) 318, 914
Csp6I GTAC 5 cut(s) 520, 546, 1190, 1448, 1587
CspCI CAANNNNNGTGG 2 cut(s) 255, 290
CviQI GTAC 5 cut(s) 520, 546, 1190, 1448, 1587
DdeI CTNAG 4 cut(s) 117, 297, 620, 1521
DpnI GATC 7 cut(s) 6, 187, 203, 555, 891, 1268, 1414
DpnII GATC 7 cut(s) 4, 185, 201, 553, 889, 1266, 1412
EaeI YGGCCR 1 cut(s) 163
Eam1104I CTCTTC 2 cut(s) 865, 1443
EarI CTCTTC 2 cut(s) 865, 1443
Ecl136II GAGCTC 1 cut(s) 1507
Eco130I CCWWGG 6 cut(s) 141, 216, 253, 438, 937, 1011
Eco24I GRGCYC 1 cut(s) 1509
Eco47I GGWCC 3 cut(s) 233, 404, 1257
Eco53kI GAGCTC 1 cut(s) 1507
Eco57I CTGAAG 1 cut(s) 1424
EcoICRI GAGCTC 1 cut(s) 1507
EcoO109I RGGNCCY 1 cut(s) 1257
EcoRI GAATTC 1 cut(s) 1322
EcoRII CCWGG 2 cut(s) 207, 1420
EcoT14I CCWWGG 6 cut(s) 141, 216, 253, 438, 937, 1011
EcoT22I ATGCAT 1 cut(s) 1480
EcoT38I GRGCYC 1 cut(s) 1509
ErhI CCWWGG 6 cut(s) 141, 216, 253, 438, 937, 1011
FalI AAGNNNNNCTT 2 cut(s) 290, 322
FaqI GGGAC 3 cut(s) 219, 611, 1270
FauI CCCGC 3 cut(s) 34, 682, 1268
FbaI TGATCA 1 cut(s) 1266
Fnu4HI GCNGC 3 cut(s) 327, 351, 1172
FokI GGATG 5 cut(s) 191, 716, 1100, 1376, 1483
FriOI GRGCYC 1 cut(s) 1509
Fsp4HI GCNGC 3 cut(s) 327, 351, 1172
FspBI CTAG 5 cut(s) 179, 431, 501, 1139, 1464
GlaI GCGC 3 cut(s) 122, 338, 1175
GluI GCNGC 3 cut(s) 327, 351, 1172
HaeIII GGCC 5 cut(s) 154, 165, 800, 1309, 1550
HapII CCGG 5 cut(s) 402, 460, 732, 885, 1331
HgaI GACGC 2 cut(s) 318, 914
HhaI GCGC 3 cut(s) 123, 339, 1176
Hin1I GRCGYC 1 cut(s) 906
Hin6I GCGC 3 cut(s) 121, 337, 1174
HinP1I GCGC 3 cut(s) 121, 337, 1174
HincII GTYRAC 1 cut(s) 964
HindII GTYRAC 1 cut(s) 964
HindIII AAGCTT 1 cut(s) 976
HpaII CCGG 5 cut(s) 402, 460, 732, 885, 1331
HphI GGTGA 5 cut(s) 289, 761, 890, 941, 1336
Hpy166II GTNNAC 4 cut(s) 25, 428, 964, 1215
Hpy188I TCNGA 5 cut(s) 493, 1126, 1400, 1443, 1522
Hpy188III TCNNGA 6 cut(s) 402, 508, 791, 893, 1076, 1270
Hpy8I GTNNAC 4 cut(s) 25, 428, 964, 1215
Hpy99I CGWCG 1 cut(s) 1250
HpyAV CCTTC 3 cut(s) 90, 179, 776
HpyCH4III ACNGT 3 cut(s) 919, 961, 1231
HpyCH4IV ACGT 2 cut(s) 612, 1245
HpyCH4V TGCA 9 cut(s) 395, 539, 700, 707, 815, 1091, 1187, 1227, 1478
HpyF10VI GCNNNNNNNGC 5 cut(s) 137, 146, 421, 536, 919
HpyF3I CTNAG 4 cut(s) 117, 297, 620, 1521
HpySE526I ACGT 2 cut(s) 612, 1245
Hsp92I GRCGYC 1 cut(s) 906
HspAI GCGC 3 cut(s) 121, 337, 1174
KflI GGGWCCC 1 cut(s) 1257
Kpn2I TCCGGA 1 cut(s) 401
Ksp22I TGATCA 1 cut(s) 1266
Kzo9I GATC 7 cut(s) 4, 185, 201, 553, 889, 1266, 1412
LguI GCTCTTC 2 cut(s) 865, 1443
LmnI GCTCC 2 cut(s) 146, 212
Lsp1109I GCAGC 3 cut(s) 313, 362, 1158
LweI GCATC 4 cut(s) 694, 817, 940, 1078
MaeI CTAG 5 cut(s) 179, 431, 501, 1139, 1464
MaeII ACGT 2 cut(s) 612, 1245
MaeIII GTNAC 3 cut(s) 34, 749, 878
MalI GATC 7 cut(s) 6, 187, 203, 555, 891, 1268, 1414
MboI GATC 7 cut(s) 4, 185, 201, 553, 889, 1266, 1412
MboII GAAGA 8 cut(s) 43, 691, 817, 882, 944, 1294, 1422, 1430
MflI RGATCY 2 cut(s) 185, 1412
MhlI GDGCHC 1 cut(s) 1509
MlsI TGGCCA 1 cut(s) 165
MluCI AATT 5 cut(s) 515, 1082, 1110, 1322, 1451
MluNI TGGCCA 1 cut(s) 165
MlyI GAGTC 4 cut(s) 598, 746, 1130, 1527
MmeI TCCRAC 4 cut(s) 290, 477, 756, 1104
MnlI CCTC 9 cut(s) 144, 176, 204, 343, 409, 705, 989, 1213, 1587
Mox20I TGGCCA 1 cut(s) 165
Mph1103I ATGCAT 1 cut(s) 1480
MroI TCCGGA 1 cut(s) 401
MscI TGGCCA 1 cut(s) 165
MseI TTAA 4 cut(s) 47, 474, 609, 1545
MslI CAYNNNNRTG 4 cut(s) 1010, 1024, 1352, 1358
Msp20I TGGCCA 1 cut(s) 165
MspA1I CMGCKG 1 cut(s) 353
MspI CCGG 5 cut(s) 402, 460, 732, 885, 1331
MspR9I CCNGG 4 cut(s) 209, 733, 886, 1422
Mva1269I GAATGC 2 cut(s) 308, 1478
MvaI CCWGG 2 cut(s) 209, 1422
MvnI CGCG 3 cut(s) 337, 665, 696
MwoI GCNNNNNNNGC 5 cut(s) 137, 146, 421, 536, 919
NciI CCSGG 2 cut(s) 733, 886
NcoI CCATGG 2 cut(s) 216, 1011
NdeII GATC 7 cut(s) 4, 185, 201, 553, 889, 1266, 1412
NheI GCTAGC 2 cut(s) 500, 1463
NlaIV GGNNCC 6 cut(s) 187, 214, 235, 759, 1258, 1259
NmuCI GTSAC 3 cut(s) 34, 749, 878
NsiI ATGCAT 1 cut(s) 1480
NspI RCATGY 1 cut(s) 1478
NspV TTCGAA 2 cut(s) 484, 1482
PagI TCATGA 2 cut(s) 790, 892
PaqCI CACCTGC 1 cut(s) 866
PciSI GCTCTTC 2 cut(s) 865, 1443
PctI GAATGC 2 cut(s) 308, 1478
PfeI GAWTC 6 cut(s) 258, 463, 486, 659, 1285, 1302
PflMI CCANNNNNTGG 1 cut(s) 322
PkrI GCNGC 3 cut(s) 328, 352, 1173
PleI GAGTC 4 cut(s) 598, 746, 1129, 1527
PpsI GAGTC 4 cut(s) 598, 746, 1129, 1527
PpuMI RGGWCCY 1 cut(s) 1257
PshBI ATTAAT 1 cut(s) 47
Psp124BI GAGCTC 1 cut(s) 1509
Psp1406I AACGTT 1 cut(s) 612
Psp5II RGGWCCY 1 cut(s) 1257
Psp6I CCWGG 2 cut(s) 207, 1420
PspGI CCWGG 2 cut(s) 207, 1420
PspN4I GGNNCC 6 cut(s) 187, 214, 235, 759, 1258, 1259
PspPI GGNCC 4 cut(s) 153, 233, 404, 1257
PspPPI RGGWCCY 1 cut(s) 1257
PstI CTGCAG 1 cut(s) 1189
PsuI RGATCY 2 cut(s) 185, 1412
PvuII CAGCTG 1 cut(s) 353
RsaI GTAC 5 cut(s) 521, 547, 1191, 1449, 1588
RsaNI GTAC 5 cut(s) 520, 546, 1190, 1448, 1587
RseI CAYNNNNRTG 4 cut(s) 1010, 1024, 1352, 1358
SacI GAGCTC 1 cut(s) 1509
SapI GCTCTTC 2 cut(s) 865, 1443
SaqAI TTAA 4 cut(s) 47, 474, 609, 1545
SatI GCNGC 3 cut(s) 327, 351, 1172
Sau3AI GATC 7 cut(s) 4, 185, 201, 553, 889, 1266, 1412
Sau96I GGNCC 4 cut(s) 153, 233, 404, 1257
ScaI AGTACT 1 cut(s) 547
SchI GAGTC 4 cut(s) 598, 746, 1130, 1527
ScrFI CCNGG 4 cut(s) 209, 733, 886, 1422
SduI GDGCHC 1 cut(s) 1509
SfaNI GCATC 4 cut(s) 694, 817, 940, 1078
SfcI CTRYAG 2 cut(s) 549, 1185
SfuI TTCGAA 2 cut(s) 484, 1482
SinI GGWCC 3 cut(s) 233, 404, 1257
SmiMI CAYNNNNRTG 4 cut(s) 1010, 1024, 1352, 1358
SmlI CTYRAG 2 cut(s) 135, 1074
SmoI CTYRAG 2 cut(s) 135, 1074
Sse9I AATT 5 cut(s) 515, 1082, 1110, 1322, 1451
SsiI CCGC 7 cut(s) 41, 114, 457, 663, 689, 953, 1261
SspMI CTAG 5 cut(s) 179, 431, 501, 1139, 1464
SstI GAGCTC 1 cut(s) 1509
StyD4I CCNGG 4 cut(s) 207, 731, 884, 1420
StyI CCWWGG 6 cut(s) 141, 216, 253, 438, 937, 1011
TaaI ACNGT 3 cut(s) 919, 961, 1231
TaiI ACGT 2 cut(s) 615, 1248
TaqI TCGA 5 cut(s) 484, 576, 825, 1248, 1482
TasI AATT 5 cut(s) 515, 1082, 1110, 1322, 1451
TatI WGTACW 3 cut(s) 519, 545, 1586
TfiI GAWTC 6 cut(s) 258, 463, 486, 659, 1285, 1302
Tru1I TTAA 4 cut(s) 47, 474, 609, 1545
Tru9I TTAA 4 cut(s) 47, 474, 609, 1545
TscAI CASTG 1 cut(s) 714
TseFI GTSAC 3 cut(s) 34, 749, 878
TseI GCWGC 3 cut(s) 326, 350, 1171
Tsp45I GTSAC 3 cut(s) 34, 749, 878
TspDTI ATGAA 7 cut(s) 640, 807, 818, 889, 1095, 1370, 1558
TspGWI ACGGA 2 cut(s) 162, 1232
TspRI CASTG 1 cut(s) 714
Van91I CCANNNNNTGG 1 cut(s) 322
VpaK11BI GGWCC 3 cut(s) 233, 404, 1257
VspI ATTAAT 1 cut(s) 47
XapI RAATTY 1 cut(s) 1322
XceI RCATGY 1 cut(s) 1478
XspI CTAG 5 cut(s) 179, 431, 501, 1139, 1464
ZrmI AGTACT 1 cut(s) 547
Zsp2I ATGCAT 1 cut(s) 1480
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.