RchiOBHm_Chr6g0300161

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000137
Physical Location & Seq
Forward (+)
61101926 .. 61104635
2710 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26954

Sequence Viewer

Length: 1668 bp
ATGCGGCTACTGTGTTTGAGTTTCATTTCTTTCCAAATTCCTATCCATCTCATGGAGTTCCCTCTTCAATATCTCAGTTCTTCTCCATCCACCATACTTGGCTTTTTATTGTTTATTCTCTCTTTATTGCTATGGATAACAAAAATTTCCAACAATAACGCAGCCAGAAAGAGGGGAGCACCGGAAGCAGCCGGTGCATGGCCATTAGTTGGTCACCTTCCCCTCTTAGGCGGCTCACTTCCACCGCATATAACCTTGGGTAACATGGCTGACAAGTATGGACCGCTCTTCACAATCAAACTCGGCGTGCACCGATCTCTTATTGTGAGCAGTTGGGACATGGCCAAAGGGTGTCTAACCACCAACGACAGAGTCTTTGCTAATCGCCCGAAGCTATTAGTCTCAGAGGTTATGGGATACAACTACGCCATGATTGGGTTCAGTCCCTATGGTCCTTACTGGCGCCAGATGCGCAAGGTAGCCACCCTGGAGCTCCTCTCGAACTACCGCTTGGAGAACCTCAGGCACGTTCGTGAATCCGAGGTGAAGGCTTGTACCAAGAACATTTACGATTTGTGGAGGCAAAACAAAAGCTCAGATCATGTGTTGGTGGACATGAAGAGGTGGTTCGGAGACGTAACGATGAACACCATGTTTAGGATGGTTATAGGGAAGCGGTTCCTAATTGAGGCTAGCTCGGAGCGTGAGAAGGAAGAGAACGAAAGGTTTCGAAAGGCGTTGAGGGAGTTTTTCAGATTGGCCGGTGAGTTTGTGATGGCGGATGCAGTGCCTTTCCTTAGGTGGTTAGATTTGGGCGGACATGAGAAGGCAATGAAGAAGACGGCAAAGGAACTAGATCATGTTCTGGAACGATGGTTGGAAGAGCATAAGCTAAAACGTAGTACTAATTCTACTTCTACTTCGCTTGAGCCTGACGATTTCATGGATATGATGCTTTCTGTTCTTGATGATAGTATACTGGAGTTTCGTGGGTACACTACTGCTGACACCATCAACAAAGCTACTTGTCTGGCTCTTATATTAGGGGGAACAGACACCACAACAGTAACACTAACATGGGCTCTTTCATTACTAGTGAACAACCCTTTAATCTTAAAGAAAGCTCAAAATGAATTAGACACAAAAGTTGGCCGGAATAGACAAGTGAATGAATCGGACGTGAAGAACCTCGTCTATCTCCAAGCCATTATCAAAGAAACCTTGCGCTTATACCCTGCTGTACCACTCCTCGCACCCCATGAATCCACAGAAGACTGCACCGTAGGAAACTACCATGTACCCGCCAAAACACGTCTAATCGTCAATATTTGGAAGCTTCACCGGGATCCGAATGTCTGGCTAGATCCCTGCATTTTCCAGCCTGAAAGGTTCCTTACAAGCCATGAGGATTTTGATGTTAGGGGCCAAAATTTTGAGCTCATACCGTTTGGAAGTGGTAGAAGAATATGTCCAGGAATTTCTTTGGCACTTCAAGTTATAGAACTCACTCTAGCTCATCTGTTGCATGGGTTTGAAATAACAGCCCCATCAGATGAACCAGTCGATATGAGTGAGACTGTTGGGTTAACAAACATGAAGGCCACACCATTAGAGGTCCTTCTCAGACCACGCCTTCCTGCTGACATTTATGAATACGTCTCGTTATAA

Protein Analysis

555

Amino Acids

63.2

Weight (kDa)

7.67

Isoelectric Point (pI)

44.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 65 - 530 8.2e-94 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1666
Acc16I TGCGCA 1 cut(s) 473
AccB1I GGYRCC 1 cut(s) 462
AccB7I CCANNNNNTGG 2 cut(s) 52, 209
AccBSI CCGCTC 1 cut(s) 286
AccI GTMKAC 1 cut(s) 976
AciI CCGC 9 cut(s) 4, 231, 245, 284, 508, 676, 779, 816, 1302
AclWI GGATC 3 cut(s) 1340, 1353, 1358
AcoI YGGCCR 4 cut(s) 200, 342, 759, 1150
AcsI RAATTY 4 cut(s) 36, 144, 1429, 1476
AcyI GRCGYC 1 cut(s) 463
AfaI GTAC 5 cut(s) 556, 904, 995, 1242, 1299
AfiI CCNNNNNNNGG 8 cut(s) 52, 171, 198, 209, 227, 435, 657, 688
AflIII ACRYGT 1 cut(s) 1310
AgsI TTSAA 3 cut(s) 68, 1493, 1535
AhlI ACTAGT 1 cut(s) 1093
AjiI CACGTC 2 cut(s) 1180, 1313
AjnI CCWGG 2 cut(s) 486, 1471
AjuI GAANNNNNNNTTGG 2 cut(s) 494, 526
AleI CACNNNNGTG 1 cut(s) 531
Alw21I GWGCWC 4 cut(s) 181, 312, 495, 1440
Alw26I GTCTC 4 cut(s) 406, 627, 1568, 1663
Alw44I GTGCAC 1 cut(s) 308
AlwI GGATC 3 cut(s) 1340, 1353, 1358
AoxI GGCC 6 cut(s) 200, 342, 759, 1150, 1423, 1599
ApaLI GTGCAC 1 cut(s) 308
ApeKI GCWGC 2 cut(s) 161, 188
ApoI RAATTY 4 cut(s) 36, 144, 1429, 1476
ArsI GACNNNNNNTTYG 2 cut(s) 359, 391
Asp700I GAANNNNTTC 2 cut(s) 677, 726
AspLEI GCGC 3 cut(s) 465, 474, 1227
AspS9I GGNCC 4 cut(s) 281, 452, 1423, 1615
AsuC2I CCSGG 1 cut(s) 1343
AsuHPI GGTGA 4 cut(s) 206, 556, 776, 1331
AsuII TTCGAA 1 cut(s) 730
AsuNHI GCTAGC 1 cut(s) 692
AvaII GGWCC 3 cut(s) 281, 452, 1615
AxyI CCTNAGG 2 cut(s) 521, 797
BaeGI GKGCMC 1 cut(s) 312
BalI TGGCCA 2 cut(s) 202, 344
BamHI GGATCC 1 cut(s) 1345
BanI GGYRCC 1 cut(s) 462
BanII GRGCYC 3 cut(s) 495, 1084, 1440
BbsI GAAGAC 2 cut(s) 845, 1278
Bbv12I GWGCWC 4 cut(s) 181, 312, 495, 1440
BbvI GCAGC 2 cut(s) 173, 200
BccI CCATC 7 cut(s) 54, 94, 655, 769, 867, 1019, 1555
BceAI ACGGC 1 cut(s) 858
BciT130I CCWGG 2 cut(s) 488, 1473
BciVI GTATCC 1 cut(s) 410
BcnI CCSGG 1 cut(s) 1343
BcoDI GTCTC 4 cut(s) 406, 627, 1568, 1663
BcuI ACTAGT 1 cut(s) 1093
BfaI CTAG 5 cut(s) 693, 854, 1094, 1361, 1511
BfoI RGCGCY 1 cut(s) 466
BfuI GTATCC 1 cut(s) 410
BisI GCNGC 4 cut(s) 5, 162, 189, 232
BlsI GCNGC 4 cut(s) 6, 163, 190, 233
BmcAI AGTACT 1 cut(s) 904
Bme1390I CCNGG 3 cut(s) 488, 1343, 1473
Bme18I GGWCC 3 cut(s) 281, 452, 1615
BmgBI CACGTC 2 cut(s) 1180, 1313
BmgT120I GGNCC 4 cut(s) 281, 452, 1423, 1615
BmiI GGNNCC 5 cut(s) 464, 680, 1347, 1391, 1424
BmrFI CCNGG 3 cut(s) 488, 1343, 1473
BmsI GCATC 3 cut(s) 459, 772, 942
BmtI GCTAGC 1 cut(s) 696
BpiI GAAGAC 2 cut(s) 845, 1278
BplI GAGNNNNNCTC 4 cut(s) 482, 514, 680, 712
BpmI CTGGAG 2 cut(s) 509, 1001
Bpu14I TTCGAA 1 cut(s) 730
BpuEI CTTGAG 1 cut(s) 947
BpuMI CCSGG 1 cut(s) 1343
BsaHI GRCGYC 1 cut(s) 463
BsaJI CCNNGG 3 cut(s) 255, 486, 540
BsaWI WCCGGW 1 cut(s) 181
Bsc4I CCNNNNNNNGG 8 cut(s) 52, 171, 198, 209, 227, 435, 657, 688
Bse118I RCCGGY 2 cut(s) 191, 761
Bse1I ACTGG 3 cut(s) 464, 984, 1559
Bse21I CCTNAGG 2 cut(s) 521, 797
Bse3DI GCAATG 1 cut(s) 837
BseBI CCWGG 2 cut(s) 488, 1473
BseDI CCNNGG 3 cut(s) 255, 486, 540
BseGI GGATG 3 cut(s) 86, 666, 787
BseLI CCNNNNNNNGG 8 cut(s) 52, 171, 198, 209, 227, 435, 657, 688
BseMI GCAATG 1 cut(s) 837
BseMII CTCAG 5 cut(s) 88, 417, 535, 609, 1636
BseNI ACTGG 3 cut(s) 464, 984, 1559
BseRI GAGGAG 2 cut(s) 485, 1238
BseSI GKGCMC 1 cut(s) 312
BseXI GCAGC 2 cut(s) 173, 200
BsgI GTGCAG 1 cut(s) 1261
BshFI GGCC 6 cut(s) 202, 344, 761, 1152, 1425, 1601
BshNI GGYRCC 1 cut(s) 462
BsiHKAI GWGCWC 4 cut(s) 181, 312, 495, 1440
BsiSI CCGG 5 cut(s) 182, 192, 762, 1153, 1342
BslFI GGGAC 2 cut(s) 350, 429
BslI CCNNNNNNNGG 8 cut(s) 52, 171, 198, 209, 227, 435, 657, 688
BsmAI GTCTC 4 cut(s) 406, 627, 1568, 1663
BsmBI CGTCTC 2 cut(s) 627, 1663
BsmFI GGGAC 2 cut(s) 350, 429
BsnI GGCC 6 cut(s) 202, 344, 761, 1152, 1425, 1601
Bsp119I TTCGAA 1 cut(s) 730
Bsp1286I GDGCHC 5 cut(s) 181, 312, 495, 1084, 1440
Bsp143I GATC 5 cut(s) 314, 598, 856, 1345, 1363
BspACI CCGC 9 cut(s) 4, 231, 245, 284, 508, 676, 779, 816, 1302
BspANI GGCC 6 cut(s) 202, 344, 761, 1152, 1425, 1601
BspCNI CTCAG 5 cut(s) 87, 416, 534, 608, 1635
BspLI GGNNCC 5 cut(s) 464, 680, 1347, 1391, 1424
BspOI GCTAGC 1 cut(s) 696
BspPI GGATC 3 cut(s) 1340, 1353, 1358
BspQI GCTCTTC 2 cut(s) 293, 876
BspT104I TTCGAA 1 cut(s) 730
BspT107I GGYRCC 1 cut(s) 462
BsrBI CCGCTC 1 cut(s) 286
BsrDI GCAATG 1 cut(s) 837
BsrFI RCCGGY 2 cut(s) 191, 761
BsrI ACTGG 3 cut(s) 464, 984, 1559
BssAI RCCGGY 2 cut(s) 191, 761
BssECI CCNNGG 3 cut(s) 255, 486, 540
BssMI GATC 5 cut(s) 314, 598, 856, 1345, 1363
BssNAI GTATAC 1 cut(s) 977
BssNI GRCGYC 1 cut(s) 463
BssT1I CCWWGG 1 cut(s) 255
Bst1107I GTATAC 1 cut(s) 977
Bst2UI CCWGG 2 cut(s) 488, 1473
Bst4CI ACNGT 5 cut(s) 12, 1066, 1282, 1446, 1579
Bst6I CTCTTC 5 cut(s) 69, 293, 614, 708, 876
BstACI GRCGYC 1 cut(s) 463
BstAPI GCANNNNNTGC 1 cut(s) 194
BstBI TTCGAA 1 cut(s) 730
BstC8I GCNNGC 2 cut(s) 308, 694
BstDEI CTNAG 7 cut(s) 74, 226, 403, 521, 595, 797, 1622
BstEII GGTNACC 1 cut(s) 212
BstENI CCTNNNNNAGG 1 cut(s) 686
BstF5I GGATG 3 cut(s) 86, 666, 787
BstH2I RGCGCY 1 cut(s) 466
BstHHI GCGC 3 cut(s) 465, 474, 1227
BstKTI GATC 5 cut(s) 317, 601, 859, 1348, 1366
BstMAI GTCTC 4 cut(s) 406, 627, 1568, 1663
BstMBI GATC 5 cut(s) 314, 598, 856, 1345, 1363
BstMWI GCNNNNNNNGC 4 cut(s) 185, 194, 469, 471
BstNI CCWGG 2 cut(s) 488, 1473
BstPI GGTNACC 1 cut(s) 212
BstSCI CCNGG 3 cut(s) 486, 1341, 1471
BstSLI GKGCMC 1 cut(s) 312
BstV1I GCAGC 2 cut(s) 173, 200
BstV2I GAAGAC 2 cut(s) 845, 1278
BstX2I RGATCY 2 cut(s) 1345, 1363
BstYI RGATCY 2 cut(s) 1345, 1363
BstZ17I GTATAC 1 cut(s) 977
Bsu36I CCTNAGG 2 cut(s) 521, 797
BsuI GTATCC 1 cut(s) 410
BsuRI GGCC 6 cut(s) 202, 344, 761, 1152, 1425, 1601
BtrI CACGTC 2 cut(s) 1180, 1313
BtsCI GGATG 3 cut(s) 86, 666, 787
BtsI GCAGTG 1 cut(s) 792
BtsIMutI CAGTG 1 cut(s) 792
Cac8I GCNNGC 2 cut(s) 308, 694
CfoI GCGC 3 cut(s) 465, 474, 1227
Cfr10I RCCGGY 2 cut(s) 191, 761
Cfr13I GGNCC 4 cut(s) 281, 452, 1423, 1615
Csp6I GTAC 5 cut(s) 555, 903, 994, 1241, 1298
CspCI CAANNNNNGTGG 2 cut(s) 79, 114
CviQI GTAC 5 cut(s) 555, 903, 994, 1241, 1298
DdeI CTNAG 7 cut(s) 74, 226, 403, 521, 595, 797, 1622
DinI GGCGCC 1 cut(s) 464
DpnI GATC 5 cut(s) 316, 600, 858, 1347, 1365
DpnII GATC 5 cut(s) 314, 598, 856, 1345, 1363
EaeI YGGCCR 4 cut(s) 200, 342, 759, 1150
Eam1104I CTCTTC 5 cut(s) 69, 293, 614, 708, 876
EarI CTCTTC 5 cut(s) 69, 293, 614, 708, 876
EciI GGCGGA 2 cut(s) 794, 831
Ecl136II GAGCTC 2 cut(s) 493, 1438
Eco130I CCWWGG 1 cut(s) 255
Eco24I GRGCYC 3 cut(s) 495, 1084, 1440
Eco47I GGWCC 3 cut(s) 281, 452, 1615
Eco53kI GAGCTC 2 cut(s) 493, 1438
Eco81I CCTNAGG 2 cut(s) 521, 797
Eco91I GGTNACC 1 cut(s) 212
EcoICRI GAGCTC 2 cut(s) 493, 1438
EcoNI CCTNNNNNAGG 1 cut(s) 686
EcoO109I RGGNCCY 1 cut(s) 1615
EcoO65I GGTNACC 1 cut(s) 212
EcoRII CCWGG 2 cut(s) 486, 1471
EcoT14I CCWWGG 1 cut(s) 255
EcoT38I GRGCYC 3 cut(s) 495, 1084, 1440
EgeI GGCGCC 1 cut(s) 464
EheI GGCGCC 1 cut(s) 464
ErhI CCWWGG 1 cut(s) 255
Esp3I CGTCTC 2 cut(s) 627, 1663
FaqI GGGAC 2 cut(s) 350, 429
FauI CCCGC 1 cut(s) 1309
FblI GTMKAC 1 cut(s) 976
Fnu4HI GCNGC 4 cut(s) 5, 162, 189, 232
FokI GGATG 3 cut(s) 73, 673, 794
FriOI GRGCYC 3 cut(s) 495, 1084, 1440
Fsp4HI GCNGC 4 cut(s) 5, 162, 189, 232
FspBI CTAG 5 cut(s) 693, 854, 1094, 1361, 1511
FspI TGCGCA 1 cut(s) 473
GlaI GCGC 3 cut(s) 464, 473, 1226
GluI GCNGC 4 cut(s) 5, 162, 189, 232
GsuI CTGGAG 2 cut(s) 509, 1001
HaeII RGCGCY 1 cut(s) 466
HaeIII GGCC 6 cut(s) 202, 344, 761, 1152, 1425, 1601
HapII CCGG 5 cut(s) 182, 192, 762, 1153, 1342
HhaI GCGC 3 cut(s) 465, 474, 1227
Hin1I GRCGYC 1 cut(s) 463
Hin6I GCGC 3 cut(s) 463, 472, 1225
HinP1I GCGC 3 cut(s) 463, 472, 1225
HincII GTYRAC 1 cut(s) 1587
HindII GTYRAC 1 cut(s) 1587
HindIII AAGCTT 1 cut(s) 1334
HinfI GANTC 4 cut(s) 372, 536, 1172, 1262
HpaI GTTAAC 1 cut(s) 1587
HpaII CCGG 5 cut(s) 182, 192, 762, 1153, 1342
HphI GGTGA 4 cut(s) 206, 556, 776, 1331
Hpy166II GTNNAC 6 cut(s) 310, 613, 977, 996, 1099, 1587
Hpy188III TCNNGA 4 cut(s) 499, 533, 866, 965
Hpy8I GTNNAC 6 cut(s) 310, 613, 977, 996, 1099, 1587
HpyAV CCTTC 7 cut(s) 227, 541, 703, 820, 1591, 1628, 1643
HpyCH4III ACNGT 5 cut(s) 12, 1066, 1282, 1446, 1579
HpyCH4IV ACGT 6 cut(s) 528, 636, 898, 1179, 1312, 1656
HpyCH4V TGCA 6 cut(s) 197, 310, 785, 1278, 1371, 1525
HpyF10VI GCNNNNNNNGC 4 cut(s) 185, 194, 469, 471
HpyF3I CTNAG 7 cut(s) 74, 226, 403, 521, 595, 797, 1622
HpySE526I ACGT 6 cut(s) 528, 636, 898, 1179, 1312, 1656
Hsp92I GRCGYC 1 cut(s) 463
HspAI GCGC 3 cut(s) 463, 472, 1225
KasI GGCGCC 1 cut(s) 462
KspAI GTTAAC 1 cut(s) 1587
Kzo9I GATC 5 cut(s) 314, 598, 856, 1345, 1363
LguI GCTCTTC 2 cut(s) 293, 876
LmnI GCTCC 4 cut(s) 176, 490, 498, 700
Lsp1109I GCAGC 2 cut(s) 173, 200
LweI GCATC 3 cut(s) 459, 772, 942
MaeI CTAG 5 cut(s) 693, 854, 1094, 1361, 1511
MaeII ACGT 6 cut(s) 528, 636, 898, 1179, 1312, 1656
MaeIII GTNAC 4 cut(s) 212, 260, 637, 1066
MalI GATC 5 cut(s) 316, 600, 858, 1347, 1365
MbiI CCGCTC 1 cut(s) 286
MboI GATC 5 cut(s) 314, 598, 856, 1345, 1363
MflI RGATCY 2 cut(s) 1345, 1363
MhlI GDGCHC 5 cut(s) 181, 312, 495, 1084, 1440
MlsI TGGCCA 2 cut(s) 202, 344
MluCI AATT 7 cut(s) 36, 144, 684, 907, 1133, 1429, 1476
MluNI TGGCCA 2 cut(s) 202, 344
Mly113I GGCGCC 1 cut(s) 463
MlyI GAGTC 1 cut(s) 381
MmeI TCCRAC 2 cut(s) 174, 858
Mox20I TGGCCA 2 cut(s) 202, 344
MroXI GAANNNNTTC 2 cut(s) 677, 726
MscI TGGCCA 2 cut(s) 202, 344
MseI TTAA 3 cut(s) 1109, 1115, 1586
MslI CAYNNNNRTG 3 cut(s) 531, 947, 1075
Msp20I TGGCCA 2 cut(s) 202, 344
MspI CCGG 5 cut(s) 182, 192, 762, 1153, 1342
MspR9I CCNGG 3 cut(s) 488, 1343, 1473
MvaI CCWGG 2 cut(s) 488, 1473
MwoI GCNNNNNNNGC 4 cut(s) 185, 194, 469, 471
NarI GGCGCC 1 cut(s) 463
NciI CCSGG 1 cut(s) 1343
NdeII GATC 5 cut(s) 314, 598, 856, 1345, 1363
NheI GCTAGC 1 cut(s) 692
NlaIV GGNNCC 5 cut(s) 464, 680, 1347, 1391, 1424
NmeAIII GCCGAG 1 cut(s) 282
NmuCI GTSAC 1 cut(s) 212
NsbI TGCGCA 1 cut(s) 473
NspV TTCGAA 1 cut(s) 730
OliI CACNNNNGTG 1 cut(s) 531
PciSI GCTCTTC 2 cut(s) 293, 876
PdmI GAANNNNTTC 2 cut(s) 677, 726
PfeI GAWTC 3 cut(s) 536, 1172, 1262
PflFI GACNNNGTC 1 cut(s) 371
PflMI CCANNNNNTGG 2 cut(s) 52, 209
PfoI TCCNGGA 1 cut(s) 1471
PkrI GCNGC 4 cut(s) 6, 163, 190, 233
PleI GAGTC 1 cut(s) 380
PluTI GGCGCC 1 cut(s) 466
PpsI GAGTC 1 cut(s) 380
PpuMI RGGWCCY 1 cut(s) 1615
PsiI TTATAA 1 cut(s) 1666
Psp124BI GAGCTC 2 cut(s) 495, 1440
Psp5II RGGWCCY 1 cut(s) 1615
Psp6I CCWGG 2 cut(s) 486, 1471
PspEI GGTNACC 1 cut(s) 212
PspGI CCWGG 2 cut(s) 486, 1471
PspN4I GGNNCC 5 cut(s) 464, 680, 1347, 1391, 1424
PspPI GGNCC 4 cut(s) 281, 452, 1423, 1615
PspPPI RGGWCCY 1 cut(s) 1615
PsuI RGATCY 2 cut(s) 1345, 1363
PsyI GACNNNGTC 1 cut(s) 371
RsaI GTAC 5 cut(s) 556, 904, 995, 1242, 1299
RsaNI GTAC 5 cut(s) 555, 903, 994, 1241, 1298
RseI CAYNNNNRTG 3 cut(s) 531, 947, 1075
SacI GAGCTC 2 cut(s) 495, 1440
SapI GCTCTTC 2 cut(s) 293, 876
SaqAI TTAA 3 cut(s) 1109, 1115, 1586
SatI GCNGC 4 cut(s) 5, 162, 189, 232
Sau3AI GATC 5 cut(s) 314, 598, 856, 1345, 1363
Sau96I GGNCC 4 cut(s) 281, 452, 1423, 1615
ScaI AGTACT 1 cut(s) 904
SchI GAGTC 1 cut(s) 381
ScrFI CCNGG 3 cut(s) 488, 1343, 1473
SduI GDGCHC 5 cut(s) 181, 312, 495, 1084, 1440
SfaNI GCATC 3 cut(s) 459, 772, 942
SfoI GGCGCC 1 cut(s) 464
SfuI TTCGAA 1 cut(s) 730
SinI GGWCC 3 cut(s) 281, 452, 1615
SmiMI CAYNNNNRTG 3 cut(s) 531, 947, 1075
SmlI CTYRAG 1 cut(s) 926
SmoI CTYRAG 1 cut(s) 926
SpeI ACTAGT 1 cut(s) 1093
Sse9I AATT 7 cut(s) 36, 144, 684, 907, 1133, 1429, 1476
SsiI CCGC 9 cut(s) 4, 231, 245, 284, 508, 676, 779, 816, 1302
SspDI GGCGCC 1 cut(s) 462
SspI AATATT 1 cut(s) 1327
SspMI CTAG 5 cut(s) 693, 854, 1094, 1361, 1511
SstI GAGCTC 2 cut(s) 495, 1440
StyD4I CCNGG 3 cut(s) 486, 1341, 1471
StyI CCWWGG 1 cut(s) 255
TaaI ACNGT 5 cut(s) 12, 1066, 1282, 1446, 1579
TaiI ACGT 6 cut(s) 531, 639, 901, 1182, 1315, 1659
TaqI TCGA 3 cut(s) 500, 730, 1563
TasI AATT 7 cut(s) 36, 144, 684, 907, 1133, 1429, 1476
TatI WGTACW 1 cut(s) 902
TauI GCSGC 2 cut(s) 7, 234
TfiI GAWTC 3 cut(s) 536, 1172, 1262
Tru1I TTAA 3 cut(s) 1109, 1115, 1586
Tru9I TTAA 3 cut(s) 1109, 1115, 1586
TscAI CASTG 1 cut(s) 792
TseFI GTSAC 1 cut(s) 212
TseI GCWGC 2 cut(s) 161, 188
Tsp45I GTSAC 1 cut(s) 212
TspRI CASTG 1 cut(s) 792
Tth111I GACNNNGTC 1 cut(s) 371
Van91I CCANNNNNTGG 2 cut(s) 52, 209
VneI GTGCAC 1 cut(s) 308
VpaK11BI GGWCC 3 cut(s) 281, 452, 1615
XagI CCTNNNNNAGG 1 cut(s) 686
XapI RAATTY 4 cut(s) 36, 144, 1429, 1476
XcmI CCANNNNNNNNNTGG 1 cut(s) 658
XmiI GTMKAC 1 cut(s) 976
XmnI GAANNNNTTC 2 cut(s) 677, 726
XspI CTAG 5 cut(s) 693, 854, 1094, 1361, 1511
ZrmI AGTACT 1 cut(s) 904
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.