Rmu_sc0001670.1_g000043

cytochrome P450

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001670.1
Physical Location & Seq
Reverse (-)
218750 .. 219136
387 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001670.1_g000043.1.cds

Sequence Viewer

Length: 387 bp
ctggaaaggaaaattcatgggaattgctatttcccatgcccatggaaaaaggaaggaattgatttcctttcctttccattccgcaatccaaacgcggccttagagttcaaaccagagagatttctgactacccacaaggatgttgatgttaggggtcaacattttgagttgattccgtttggaagtggcagaagatcttgccctggtttatcatttggccttcaaatggtacagtttaccttggctagttttctacatgcattccagatctcagctccctccaatgcaggagttgatatgtctgagagctttggactcacaaacggcaaggccactctacttgaagttctcatcaagccttgcttgtcttttgaactttacaaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

128

Amino Acids

14.43

Weight (kDa)

8.43

Isoelectric Point (pI)

32.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 95
AciI CCGC 2 cut(s) 82, 95
AcsI RAATTY 1 cut(s) 12
AfaI GTAC 1 cut(s) 231
AfiI CCNNNNNNNGG 1 cut(s) 226
AgsI TTSAA 4 cut(s) 109, 224, 344, 374
AjnI CCWGG 1 cut(s) 202
AluBI AGCT 2 cut(s) 275, 309
AluI AGCT 2 cut(s) 275, 309
AoxI GGCC 3 cut(s) 96, 217, 330
ApoI RAATTY 1 cut(s) 12
BceAI ACGGC 1 cut(s) 340
BciT130I CCWGG 1 cut(s) 204
BfaI CTAG 1 cut(s) 246
BglII AGATCT 2 cut(s) 194, 267
BisI GCNGC 1 cut(s) 96
BlsI GCNGC 1 cut(s) 97
Bme1390I CCNGG 1 cut(s) 204
BmrFI CCNGG 1 cut(s) 204
BsaJI CCNNGG 3 cut(s) 41, 202, 240
Bsc4I CCNNNNNNNGG 1 cut(s) 226
BseBI CCWGG 1 cut(s) 204
BseDI CCNNGG 3 cut(s) 41, 202, 240
BseGI GGATG 1 cut(s) 145
BseLI CCNNNNNNNGG 1 cut(s) 226
BseMII CTCAG 2 cut(s) 285, 294
Bsh1236I CGCG 1 cut(s) 95
BshFI GGCC 3 cut(s) 98, 219, 332
BslI CCNNNNNNNGG 1 cut(s) 226
BsmI GAATGC 1 cut(s) 260
BsnI GGCC 3 cut(s) 98, 219, 332
Bsp143I GATC 2 cut(s) 194, 267
Bsp19I CCATGG 1 cut(s) 41
BspACI CCGC 2 cut(s) 82, 95
BspANI GGCC 3 cut(s) 98, 219, 332
BspCNI CTCAG 2 cut(s) 284, 295
BspFNI CGCG 1 cut(s) 95
BssECI CCNNGG 3 cut(s) 41, 202, 240
BssMI GATC 2 cut(s) 194, 267
BssT1I CCWWGG 2 cut(s) 41, 240
Bst2UI CCWGG 1 cut(s) 204
Bst4CI ACNGT 1 cut(s) 234
BstDEI CTNAG 3 cut(s) 100, 271, 303
BstDSI CCRYGG 1 cut(s) 41
BstF5I GGATG 1 cut(s) 145
BstFNI CGCG 1 cut(s) 95
BstKTI GATC 2 cut(s) 197, 270
BstMBI GATC 2 cut(s) 194, 267
BstNI CCWGG 1 cut(s) 204
BstNSI RCATGY 1 cut(s) 260
BstSCI CCNGG 1 cut(s) 202
BstUI CGCG 1 cut(s) 95
BstX2I RGATCY 2 cut(s) 194, 267
BstXI CCANNNNNNTGG 1 cut(s) 42
BstYI RGATCY 2 cut(s) 194, 267
BsuRI GGCC 3 cut(s) 98, 219, 332
BtgI CCRYGG 1 cut(s) 41
BtsCI GGATG 1 cut(s) 145
Csp6I GTAC 1 cut(s) 230
CspCI CAANNNNNGTGG 2 cut(s) 322, 357
CviAII CATG 4 cut(s) 17, 36, 42, 257
CviJI RGCY 7 cut(s) 98, 219, 245, 275, 309, 332, 358
CviKI_1 RGCY 7 cut(s) 98, 219, 245, 275, 309, 332, 358
CviQI GTAC 1 cut(s) 230
DdeI CTNAG 3 cut(s) 100, 271, 303
DpnI GATC 2 cut(s) 196, 269
DpnII GATC 2 cut(s) 194, 267
Eco130I CCWWGG 2 cut(s) 41, 240
EcoRII CCWGG 1 cut(s) 202
EcoT14I CCWWGG 2 cut(s) 41, 240
EcoT22I ATGCAT 1 cut(s) 262
ErhI CCWWGG 2 cut(s) 41, 240
FaeI CATG 4 cut(s) 20, 39, 45, 260
FaiI YATR 5 cut(s) 18, 37, 43, 258, 299
FalI AAGNNNNNCTT 2 cut(s) 347, 379
FatI CATG 4 cut(s) 16, 35, 41, 256
Fnu4HI GCNGC 1 cut(s) 96
FokI GGATG 1 cut(s) 152
Fsp4HI GCNGC 1 cut(s) 96
FspBI CTAG 1 cut(s) 246
GluI GCNGC 1 cut(s) 96
HaeIII GGCC 3 cut(s) 98, 219, 332
Hin1II CATG 4 cut(s) 20, 39, 45, 260
HincII GTYRAC 1 cut(s) 158
HindII GTYRAC 1 cut(s) 158
HinfI GANTC 2 cut(s) 172, 315
Hpy166II GTNNAC 2 cut(s) 158, 237
Hpy188I TCNGA 2 cut(s) 126, 304
Hpy188III TCNNGA 1 cut(s) 265
Hpy8I GTNNAC 2 cut(s) 158, 237
HpyAV CCTTC 2 cut(s) 47, 230
HpyCH4III ACNGT 1 cut(s) 234
HpyCH4V TGCA 2 cut(s) 260, 287
HpyF3I CTNAG 3 cut(s) 100, 271, 303
Hsp92II CATG 4 cut(s) 20, 39, 45, 260
Kzo9I GATC 2 cut(s) 194, 267
LmnI GCTCC 1 cut(s) 280
LpnPI CCDG 5 cut(s) 126, 189, 216, 273, 278
MaeI CTAG 1 cut(s) 246
MalI GATC 2 cut(s) 196, 269
MboI GATC 2 cut(s) 194, 267
MboII GAAGA 1 cut(s) 204
MflI RGATCY 2 cut(s) 194, 267
MluCI AATT 3 cut(s) 12, 22, 57
MlyI GAGTC 1 cut(s) 309
MnlI CCTC 1 cut(s) 289
Mph1103I ATGCAT 1 cut(s) 262
MslI CAYNNNNRTG 2 cut(s) 40, 138
MspR9I CCNGG 1 cut(s) 204
Mva1269I GAATGC 1 cut(s) 260
MvaI CCWGG 1 cut(s) 204
MvnI CGCG 1 cut(s) 95
NcoI CCATGG 1 cut(s) 41
NdeII GATC 2 cut(s) 194, 267
NlaIII CATG 4 cut(s) 20, 39, 45, 260
NsiI ATGCAT 1 cut(s) 262
NspI RCATGY 1 cut(s) 260
PctI GAATGC 1 cut(s) 260
PfeI GAWTC 1 cut(s) 172
PkrI GCNGC 1 cut(s) 97
PleI GAGTC 1 cut(s) 309
PpsI GAGTC 1 cut(s) 309
Psp6I CCWGG 1 cut(s) 202
PspGI CCWGG 1 cut(s) 202
PsuI RGATCY 2 cut(s) 194, 267
RsaI GTAC 1 cut(s) 231
RsaNI GTAC 1 cut(s) 230
RseI CAYNNNNRTG 2 cut(s) 40, 138
SatI GCNGC 1 cut(s) 96
Sau3AI GATC 2 cut(s) 194, 267
SchI GAGTC 1 cut(s) 309
ScrFI CCNGG 1 cut(s) 204
SetI ASST 3 cut(s) 242, 277, 311
SmiMI CAYNNNNRTG 2 cut(s) 40, 138
Sse9I AATT 3 cut(s) 12, 22, 57
SsiI CCGC 2 cut(s) 82, 95
SspMI CTAG 1 cut(s) 246
StyD4I CCNGG 1 cut(s) 202
StyI CCWWGG 2 cut(s) 41, 240
TaaI ACNGT 1 cut(s) 234
TasI AATT 3 cut(s) 12, 22, 57
TauI GCSGC 1 cut(s) 98
TfiI GAWTC 1 cut(s) 172
TspDTI ATGAA 1 cut(s) 5
TspGWI ACGGA 1 cut(s) 165
XapI RAATTY 1 cut(s) 12
XceI RCATGY 1 cut(s) 260
XspI CTAG 1 cut(s) 246
Zsp2I ATGCAT 1 cut(s) 262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.