Rroxscaffold_4G00296870

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000137
Physical Location & Seq
Reverse (-)
16884769 .. 16888134
3366 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00296870.1

Sequence Viewer

Length: 1608 bp
ATGGAGTTTCTGCTTCCATCTTCCATTTGTGATCCAACTACCATCTTAGCATTTTTACTATTTCTTTTCTCTTCCGTATGGATATCAAAATACTTGCAGAAAAACACAGCAAAGAACAAAGGTCCCCCGGAAGCGGCCGGTGGATGGCCAATACTCGGCCATCTTCCCCTCTTAGGAGGGCCTCAACCGCCCCACATTACCCTAGGGAACATGGCTGACAAGTACGGACCGCTCTTCACCATCAAGCTTGGTGTGCACCGAGCTCTTGTTGTTAGCAGTTGGGATGTGGCTAAAGAGTGTTTCACCACTAATGATAAAGCTTTTGCCAACCGCCCGAAAGCTTTAGGCCCGGAGATTTTGGGGTACGACTATGCCATGTTCGGTTTTAGCCCTTACGGACCTTACTGGCGCCAGGTGCGAAAGATAGCCACGCTGCACATCCTCTCCAACCACAAGTTGGAGTTGCTCAAGCACGTCCGGGAAACGGAGGTGAAGGTGTCTACGAAACATATATTTGATATGTGGGAGCGAAACAAAGGTGTCTCAAATAAGGTGCTGGTGGACATGAAGAGGTGGTTTACAGACTTAACTTTAAATGTCATGTTCAGGATGGTTGTTGGAAAGCGACTTCTTGGGGCTACCACGGCGCAAGAGAAGGAAAAGAACGAAAGCTTTCGAAAGGTGTTGAGGGATTTTTTTATATTAACTGGTGAATTTGTAATCTCAGATGCAGTTCCATATCTTAGGTGGTTGGATTTGGGAGGTTATGAGAAGGCCATGAAGAAGACGGCTAAAGAACTCGATGGTGCGGCTCAAAAATGGTTAGAAGAGCATAAGCACAGGAGAAGTACTAATTCTGTGGATGATTGTGAGCCTGACTTCATGGATATGATGCTTACTGTCCTTGATGATGATAGTATAAAAGAGTTTGCCGGTTCAATTACTGCTGATACAATTAACAAAGCTACATGCCTGGCGGTTCTTCTAGGAGGGATAGAAACCTCATCAGTGACATTAATCTGGGCTCTTTCTTTATTGCTCAACAATCCTAAAGTCCTGAAGAAGGCTCAACTTGAATTAGACAACCATGTTGGTAGGGAAAGGCAAGTGAATGAATCAGATGTGAAGAATCTAGTCTACCTCCAAGCCATTATCAAGGAAACCTTGCGGCTATACCCTGCTGCACCTCTCTCAGTACCACATGAATCCAGCGAAGACTGCACAATAGGTAACTATCATGTAAGCTCAGGCACGCGTCTTCTTATCAACCTTTCAAAGCTTCAGCGCGATCCAAATGTCTGGCTCGATCCTTGTCTATTCCAACCAGAAAGGTTTCTTACAACTCACAAGAATGTTGATGTTAGGGGCCAGAGTTTTGAATTTATACCATTTGGAAGTGGTAGACGAATATGTCCAGGAATCTCTCTCGCACTTCGCGTTACTCAACTTGCACTGGCTCATTTGCTGCATGGGTTTGAAATTGCAACTCCATCTGATGAACCAGTTGACATGGGTGAGAGTTCAGGAATAACAAACATGAAGACCAGCCCTCTGGAGGTCCTTCTCACCCCACGCCTACATCCTAAACTTTATGAAAATGTTGACTAG

Protein Analysis

535

Amino Acids

60.2

Weight (kDa)

8.04

Isoelectric Point (pI)

40.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 47 - 511 6.7e-90 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1410
AccB1I GGYRCC 1 cut(s) 408
AccB7I CCANNNNNTGG 1 cut(s) 457
AccBSI CCGCTC 1 cut(s) 232
AccI GTMKAC 3 cut(s) 500, 1137, 1402
AccII CGCG 3 cut(s) 1255, 1287, 1437
AciI CCGC 7 cut(s) 134, 188, 230, 331, 809, 977, 1168
AclWI GGATC 3 cut(s) 26, 1283, 1301
AcoI YGGCCR 3 cut(s) 135, 146, 157
AcsI RAATTY 2 cut(s) 713, 1379
AcuI CTGAAG 2 cut(s) 1079, 1265
AcyI GRCGYC 1 cut(s) 409
AfaI GTAC 4 cut(s) 224, 365, 850, 1197
AfiI CCNNNNNNNGG 8 cut(s) 133, 144, 155, 173, 457, 484, 1063, 1555
AflIII ACRYGT 1 cut(s) 1253
AgsI TTSAA 5 cut(s) 939, 1076, 1275, 1379, 1478
AjiI CACGTC 1 cut(s) 475
AjnI CCWGG 3 cut(s) 411, 972, 1414
AluBI AGCT 8 cut(s) 247, 263, 320, 341, 672, 965, 1245, 1279
AluI AGCT 8 cut(s) 247, 263, 320, 341, 672, 965, 1245, 1279
Alw21I GWGCWC 2 cut(s) 258, 265
Alw26I GTCTC 1 cut(s) 547
Alw44I GTGCAC 1 cut(s) 254
AlwI GGATC 3 cut(s) 26, 1283, 1301
AoxI GGCC 7 cut(s) 135, 146, 157, 179, 346, 774, 1366
ApaLI GTGCAC 1 cut(s) 254
ApeKI GCWGC 3 cut(s) 433, 1181, 1465
ApoI RAATTY 2 cut(s) 713, 1379
AseI ATTAAT 1 cut(s) 1016
Asp700I GAANNNNTTC 2 cut(s) 672, 1332
AspA2I CCTAGG 1 cut(s) 202
AspLEI GCGC 3 cut(s) 411, 649, 1287
AspS9I GGNCC 7 cut(s) 122, 179, 227, 347, 398, 1366, 1558
AsuC2I CCSGG 3 cut(s) 128, 350, 479
AsuHPI GGTGA 6 cut(s) 229, 295, 502, 722, 1526, 1558
AsuII TTCGAA 1 cut(s) 676
AvaII GGWCC 4 cut(s) 122, 227, 398, 1558
AvrII CCTAGG 1 cut(s) 202
BaeGI GKGCMC 1 cut(s) 258
BalI TGGCCA 1 cut(s) 148
BanI GGYRCC 1 cut(s) 408
BanII GRGCYC 2 cut(s) 265, 1027
BbsI GAAGAC 4 cut(s) 791, 1221, 1250, 1547
Bbv12I GWGCWC 2 cut(s) 258, 265
BbvI GCAGC 3 cut(s) 420, 1168, 1452
BccI CCATC 8 cut(s) 25, 50, 138, 168, 248, 604, 797, 1498
BceAI ACGGC 2 cut(s) 660, 804
BciT130I CCWGG 3 cut(s) 413, 974, 1416
BcnI CCSGG 3 cut(s) 128, 350, 479
BcoDI GTCTC 1 cut(s) 547
BfaI CTAG 4 cut(s) 203, 986, 1133, 1606
BfoI RGCGCY 1 cut(s) 412
BisI GCNGC 6 cut(s) 135, 434, 810, 1169, 1182, 1466
BlnI CCTAGG 1 cut(s) 202
BlsI GCNGC 6 cut(s) 136, 435, 811, 1170, 1183, 1467
BmcAI AGTACT 1 cut(s) 850
Bme1390I CCNGG 6 cut(s) 128, 350, 413, 479, 974, 1416
Bme18I GGWCC 4 cut(s) 122, 227, 398, 1558
BmgBI CACGTC 1 cut(s) 475
BmgT120I GGNCC 7 cut(s) 122, 179, 227, 347, 398, 1366, 1558
BmiI GGNNCC 3 cut(s) 124, 410, 1367
BmrFI CCNGG 6 cut(s) 128, 350, 413, 479, 974, 1416
BmsI GCATC 2 cut(s) 718, 882
BpiI GAAGAC 4 cut(s) 791, 1221, 1250, 1547
BpmI CTGGAG 1 cut(s) 1574
Bpu10I CCTNAGC 1 cut(s) 1246
Bpu14I TTCGAA 1 cut(s) 676
BpuEI CTTGAG 1 cut(s) 452
BpuMI CCSGG 3 cut(s) 128, 350, 479
BsaHI GRCGYC 1 cut(s) 409
BsaJI CCNNGG 3 cut(s) 126, 202, 642
BsaXI ACNNNNNCTCC 2 cut(s) 428, 458
Bsc4I CCNNNNNNNGG 8 cut(s) 133, 144, 155, 173, 457, 484, 1063, 1555
Bse118I RCCGGY 2 cut(s) 137, 932
Bse1I ACTGG 4 cut(s) 410, 712, 1458, 1502
BseBI CCWGG 3 cut(s) 413, 974, 1416
BseDI CCNNGG 3 cut(s) 126, 202, 642
BseGI GGATG 6 cut(s) 149, 289, 438, 615, 868, 1579
BseLI CCNNNNNNNGG 8 cut(s) 133, 144, 155, 173, 457, 484, 1063, 1555
BseMII CTCAG 3 cut(s) 738, 1206, 1260
BseNI ACTGG 4 cut(s) 410, 712, 1458, 1502
BseSI GKGCMC 1 cut(s) 258
BseX3I CGGCCG 1 cut(s) 135
BseXI GCAGC 3 cut(s) 420, 1168, 1452
BsgI GTGCAG 3 cut(s) 419, 1167, 1204
Bsh1236I CGCG 3 cut(s) 1255, 1287, 1437
Bsh1285I CGRYCG 1 cut(s) 138
BshFI GGCC 7 cut(s) 137, 148, 159, 181, 348, 776, 1368
BshNI GGYRCC 1 cut(s) 408
BsiEI CGRYCG 1 cut(s) 138
BsiHKAI GWGCWC 2 cut(s) 258, 265
BsiSI CCGG 5 cut(s) 128, 138, 350, 478, 933
BslFI GGGAC 1 cut(s) 108
BslI CCNNNNNNNGG 8 cut(s) 133, 144, 155, 173, 457, 484, 1063, 1555
BsmAI GTCTC 1 cut(s) 547
BsmFI GGGAC 1 cut(s) 108
BsnI GGCC 7 cut(s) 137, 148, 159, 181, 348, 776, 1368
Bsp119I TTCGAA 1 cut(s) 676
Bsp1286I GDGCHC 3 cut(s) 258, 265, 1027
Bsp143I GATC 3 cut(s) 31, 1288, 1306
BspACI CCGC 7 cut(s) 134, 188, 230, 331, 809, 977, 1168
BspANI GGCC 7 cut(s) 137, 148, 159, 181, 348, 776, 1368
BspCNI CTCAG 3 cut(s) 737, 1205, 1259
BspFNI CGCG 3 cut(s) 1255, 1287, 1437
BspLI GGNNCC 3 cut(s) 124, 410, 1367
BspPI GGATC 3 cut(s) 26, 1283, 1301
BspQI GCTCTTC 2 cut(s) 239, 822
BspT104I TTCGAA 1 cut(s) 676
BspT107I GGYRCC 1 cut(s) 408
BsrBI CCGCTC 1 cut(s) 232
BsrFI RCCGGY 2 cut(s) 137, 932
BsrI ACTGG 4 cut(s) 410, 712, 1458, 1502
BssAI RCCGGY 2 cut(s) 137, 932
BssECI CCNNGG 3 cut(s) 126, 202, 642
BssMI GATC 3 cut(s) 31, 1288, 1306
BssNI GRCGYC 1 cut(s) 409
BssT1I CCWWGG 1 cut(s) 202
Bst2UI CCWGG 3 cut(s) 413, 974, 1416
Bst4CI ACNGT 1 cut(s) 901
Bst6I CTCTTC 4 cut(s) 76, 239, 563, 822
BstACI GRCGYC 1 cut(s) 409
BstBI TTCGAA 1 cut(s) 676
BstC8I GCNNGC 1 cut(s) 1253
BstDEI CTNAG 6 cut(s) 46, 172, 724, 743, 1192, 1246
BstDSI CCRYGG 1 cut(s) 642
BstENI CCTNNNNNAGG 1 cut(s) 1061
BstF5I GGATG 6 cut(s) 149, 289, 438, 615, 868, 1579
BstFNI CGCG 3 cut(s) 1255, 1287, 1437
BstH2I RGCGCY 1 cut(s) 412
BstHHI GCGC 3 cut(s) 411, 649, 1287
BstKTI GATC 3 cut(s) 34, 1291, 1309
BstMAI GTCTC 1 cut(s) 547
BstMBI GATC 3 cut(s) 31, 1288, 1306
BstMCI CGRYCG 1 cut(s) 138
BstMWI GCNNNNNNNGC 5 cut(s) 187, 253, 415, 644, 1218
BstNI CCWGG 3 cut(s) 413, 974, 1416
BstNSI RCATGY 1 cut(s) 972
BstSCI CCNGG 6 cut(s) 126, 348, 411, 477, 972, 1414
BstSLI GKGCMC 1 cut(s) 258
BstUI CGCG 3 cut(s) 1255, 1287, 1437
BstV1I GCAGC 3 cut(s) 420, 1168, 1452
BstV2I GAAGAC 4 cut(s) 791, 1221, 1250, 1547
BstXI CCANNNNNNTGG 2 cut(s) 1299, 1552
BstZI CGGCCG 1 cut(s) 135
BsuRI GGCC 7 cut(s) 137, 148, 159, 181, 348, 776, 1368
BtgI CCRYGG 1 cut(s) 642
BtrI CACGTC 1 cut(s) 475
BtsCI GGATG 6 cut(s) 149, 289, 438, 615, 868, 1579
BtsIMutI CAGTG 2 cut(s) 1014, 1451
Cac8I GCNNGC 1 cut(s) 1253
CfoI GCGC 3 cut(s) 411, 649, 1287
Cfr10I RCCGGY 2 cut(s) 137, 932
Cfr13I GGNCC 7 cut(s) 122, 179, 227, 347, 398, 1366, 1558
CpoI CGGWCCG 1 cut(s) 227
CseI GACGC 1 cut(s) 1244
Csp6I GTAC 4 cut(s) 223, 364, 849, 1196
CspI CGGWCCG 1 cut(s) 227
CviQI GTAC 4 cut(s) 223, 364, 849, 1196
DdeI CTNAG 6 cut(s) 46, 172, 724, 743, 1192, 1246
DinI GGCGCC 1 cut(s) 410
DpnI GATC 3 cut(s) 33, 1290, 1308
DpnII GATC 3 cut(s) 31, 1288, 1306
DraI TTTAAA 1 cut(s) 594
DrdI GACNNNNNNGTC 1 cut(s) 1410
DseDI GACNNNNNNGTC 1 cut(s) 1410
EaeI YGGCCR 3 cut(s) 135, 146, 157
EagI CGGCCG 1 cut(s) 135
Eam1104I CTCTTC 4 cut(s) 76, 239, 563, 822
EarI CTCTTC 4 cut(s) 76, 239, 563, 822
Ecl136II GAGCTC 1 cut(s) 263
EclXI CGGCCG 1 cut(s) 135
Eco130I CCWWGG 1 cut(s) 202
Eco24I GRGCYC 2 cut(s) 265, 1027
Eco32I GATATC 1 cut(s) 84
Eco47I GGWCC 4 cut(s) 122, 227, 398, 1558
Eco52I CGGCCG 1 cut(s) 135
Eco53kI GAGCTC 1 cut(s) 263
Eco57I CTGAAG 2 cut(s) 1079, 1265
EcoICRI GAGCTC 1 cut(s) 263
EcoNI CCTNNNNNAGG 1 cut(s) 1061
EcoO109I RGGNCCY 3 cut(s) 122, 179, 1558
EcoRII CCWGG 3 cut(s) 411, 972, 1414
EcoRV GATATC 1 cut(s) 84
EcoT14I CCWWGG 1 cut(s) 202
EcoT38I GRGCYC 2 cut(s) 265, 1027
EgeI GGCGCC 1 cut(s) 410
EheI GGCGCC 1 cut(s) 410
ErhI CCWWGG 1 cut(s) 202
FalI AAGNNNNNCTT 2 cut(s) 1148, 1180
FaqI GGGAC 1 cut(s) 108
FblI GTMKAC 3 cut(s) 500, 1137, 1402
Fnu4HI GCNGC 6 cut(s) 135, 434, 810, 1169, 1182, 1466
FokI GGATG 6 cut(s) 156, 296, 425, 622, 875, 1566
FriOI GRGCYC 2 cut(s) 265, 1027
Fsp4HI GCNGC 6 cut(s) 135, 434, 810, 1169, 1182, 1466
FspBI CTAG 4 cut(s) 203, 986, 1133, 1606
GlaI GCGC 3 cut(s) 410, 648, 1286
GluI GCNGC 6 cut(s) 135, 434, 810, 1169, 1182, 1466
GsuI CTGGAG 1 cut(s) 1574
HaeII RGCGCY 1 cut(s) 412
HaeIII GGCC 7 cut(s) 137, 148, 159, 181, 348, 776, 1368
HapII CCGG 5 cut(s) 128, 138, 350, 478, 933
HgaI GACGC 1 cut(s) 1244
HhaI GCGC 3 cut(s) 411, 649, 1287
Hin1I GRCGYC 1 cut(s) 409
Hin6I GCGC 3 cut(s) 409, 647, 1285
HinP1I GCGC 3 cut(s) 409, 647, 1285
HincII GTYRAC 2 cut(s) 1507, 1603
HindII GTYRAC 2 cut(s) 1507, 1603
HindIII AAGCTT 5 cut(s) 245, 318, 339, 670, 1277
HinfI GANTC 4 cut(s) 1115, 1129, 1205, 1419
HpaII CCGG 5 cut(s) 128, 138, 350, 478, 933
HphI GGTGA 6 cut(s) 229, 295, 502, 722, 1526, 1558
Hpy166II GTNNAC 8 cut(s) 256, 501, 562, 579, 1138, 1403, 1507, 1603
Hpy188I TCNGA 3 cut(s) 727, 1120, 1495
Hpy188III TCNNGA 4 cut(s) 607, 1057, 1524, 1553
Hpy8I GTNNAC 8 cut(s) 256, 501, 562, 579, 1138, 1403, 1507, 1603
HpyAV CCTTC 5 cut(s) 487, 649, 766, 1057, 1571
HpyCH4III ACNGT 1 cut(s) 901
HpyCH4IV ACGT 1 cut(s) 474
HpyCH4V TGCA 9 cut(s) 97, 256, 436, 731, 1184, 1221, 1451, 1468, 1484
HpyF10VI GCNNNNNNNGC 5 cut(s) 187, 253, 415, 644, 1218
HpyF3I CTNAG 6 cut(s) 46, 172, 724, 743, 1192, 1246
HpySE526I ACGT 1 cut(s) 474
Hsp92I GRCGYC 1 cut(s) 409
HspAI GCGC 3 cut(s) 409, 647, 1285
KasI GGCGCC 1 cut(s) 408
Kzo9I GATC 3 cut(s) 31, 1288, 1306
LguI GCTCTTC 2 cut(s) 239, 822
LmnI GCTCC 1 cut(s) 526
Lsp1109I GCAGC 3 cut(s) 420, 1168, 1452
LweI GCATC 2 cut(s) 718, 882
MaeI CTAG 4 cut(s) 203, 986, 1133, 1606
MaeII ACGT 1 cut(s) 474
MaeIII GTNAC 3 cut(s) 1009, 1229, 1438
MalI GATC 3 cut(s) 33, 1290, 1308
MbiI CCGCTC 1 cut(s) 232
MboI GATC 3 cut(s) 31, 1288, 1306
MhlI GDGCHC 3 cut(s) 258, 265, 1027
MlsI TGGCCA 1 cut(s) 148
MluCI AATT 7 cut(s) 713, 853, 939, 954, 1076, 1379, 1479
MluI ACGCGT 1 cut(s) 1253
MluNI TGGCCA 1 cut(s) 148
Mly113I GGCGCC 1 cut(s) 409
MmeI TCCRAC 6 cut(s) 59, 438, 471, 598, 732, 1345
Mox20I TGGCCA 1 cut(s) 148
MroXI GAANNNNTTC 2 cut(s) 672, 1332
MscI TGGCCA 1 cut(s) 148
MseI TTAA 5 cut(s) 587, 593, 704, 957, 1016
MslI CAYNNNNRTG 2 cut(s) 887, 1350
Msp20I TGGCCA 1 cut(s) 148
MspI CCGG 5 cut(s) 128, 138, 350, 478, 933
MspR9I CCNGG 6 cut(s) 128, 350, 413, 479, 974, 1416
MvaI CCWGG 3 cut(s) 413, 974, 1416
MvnI CGCG 3 cut(s) 1255, 1287, 1437
MwoI GCNNNNNNNGC 5 cut(s) 187, 253, 415, 644, 1218
NarI GGCGCC 1 cut(s) 409
NciI CCSGG 3 cut(s) 128, 350, 479
NdeII GATC 3 cut(s) 31, 1288, 1306
NlaIV GGNNCC 3 cut(s) 124, 410, 1367
NmeAIII GCCGAG 1 cut(s) 135
NmuCI GTSAC 1 cut(s) 1009
NspI RCATGY 1 cut(s) 972
NspV TTCGAA 1 cut(s) 676
PciSI GCTCTTC 2 cut(s) 239, 822
PcsI WCGNNNNNNNCGW 1 cut(s) 1434
PdmI GAANNNNTTC 2 cut(s) 672, 1332
PfeI GAWTC 4 cut(s) 1115, 1129, 1205, 1419
PflMI CCANNNNNTGG 1 cut(s) 457
PfoI TCCNGGA 2 cut(s) 477, 1414
PkrI GCNGC 6 cut(s) 136, 435, 811, 1170, 1183, 1467
PluTI GGCGCC 1 cut(s) 412
PpuMI RGGWCCY 2 cut(s) 122, 1558
PshBI ATTAAT 1 cut(s) 1016
Psp124BI GAGCTC 1 cut(s) 265
Psp5II RGGWCCY 2 cut(s) 122, 1558
Psp6I CCWGG 3 cut(s) 411, 972, 1414
PspGI CCWGG 3 cut(s) 411, 972, 1414
PspN4I GGNNCC 3 cut(s) 124, 410, 1367
PspPI GGNCC 7 cut(s) 122, 179, 227, 347, 398, 1366, 1558
PspPPI RGGWCCY 2 cut(s) 122, 1558
RsaI GTAC 4 cut(s) 224, 365, 850, 1197
RsaNI GTAC 4 cut(s) 223, 364, 849, 1196
RseI CAYNNNNRTG 2 cut(s) 887, 1350
Rsr2I CGGWCCG 1 cut(s) 227
RsrII CGGWCCG 1 cut(s) 227
SacI GAGCTC 1 cut(s) 265
SapI GCTCTTC 2 cut(s) 239, 822
SaqAI TTAA 5 cut(s) 587, 593, 704, 957, 1016
SatI GCNGC 6 cut(s) 135, 434, 810, 1169, 1182, 1466
Sau3AI GATC 3 cut(s) 31, 1288, 1306
Sau96I GGNCC 7 cut(s) 122, 179, 227, 347, 398, 1366, 1558
ScaI AGTACT 1 cut(s) 850
ScrFI CCNGG 6 cut(s) 128, 350, 413, 479, 974, 1416
SduI GDGCHC 3 cut(s) 258, 265, 1027
SfaNI GCATC 2 cut(s) 718, 882
SfoI GGCGCC 1 cut(s) 410
SfuI TTCGAA 1 cut(s) 676
SinI GGWCC 4 cut(s) 122, 227, 398, 1558
SmiMI CAYNNNNRTG 2 cut(s) 887, 1350
SmlI CTYRAG 1 cut(s) 467
SmoI CTYRAG 1 cut(s) 467
Sse9I AATT 7 cut(s) 713, 853, 939, 954, 1076, 1379, 1479
SsiI CCGC 7 cut(s) 134, 188, 230, 331, 809, 977, 1168
SspDI GGCGCC 1 cut(s) 408
SspMI CTAG 4 cut(s) 203, 986, 1133, 1606
SstI GAGCTC 1 cut(s) 265
StyD4I CCNGG 6 cut(s) 126, 348, 411, 477, 972, 1414
StyI CCWWGG 1 cut(s) 202
TaaI ACNGT 1 cut(s) 901
TaiI ACGT 1 cut(s) 477
TaqI TCGA 3 cut(s) 676, 801, 1305
TasI AATT 7 cut(s) 713, 853, 939, 954, 1076, 1379, 1479
TatI WGTACW 1 cut(s) 848
TauI GCSGC 3 cut(s) 137, 812, 1171
TfiI GAWTC 4 cut(s) 1115, 1129, 1205, 1419
Tru1I TTAA 5 cut(s) 587, 593, 704, 957, 1016
Tru9I TTAA 5 cut(s) 587, 593, 704, 957, 1016
TscAI CASTG 2 cut(s) 1014, 1458
TseFI GTSAC 1 cut(s) 1009
TseI GCWGC 3 cut(s) 433, 1181, 1465
Tsp45I GTSAC 1 cut(s) 1009
TspDTI ATGAA 8 cut(s) 581, 794, 871, 1128, 1218, 1512, 1553, 1608
TspGWI ACGGA 4 cut(s) 64, 240, 411, 500
TspRI CASTG 2 cut(s) 1014, 1458
Van91I CCANNNNNTGG 1 cut(s) 457
VneI GTGCAC 1 cut(s) 254
VpaK11BI GGWCC 4 cut(s) 122, 227, 398, 1558
VspI ATTAAT 1 cut(s) 1016
XagI CCTNNNNNAGG 1 cut(s) 1061
XapI RAATTY 2 cut(s) 713, 1379
XceI RCATGY 1 cut(s) 972
XcmI CCANNNNNNNNNTGG 2 cut(s) 454, 744
XmaJI CCTAGG 1 cut(s) 202
XmiI GTMKAC 3 cut(s) 500, 1137, 1402
XmnI GAANNNNTTC 2 cut(s) 672, 1332
XspI CTAG 4 cut(s) 203, 986, 1133, 1606
ZrmI AGTACT 1 cut(s) 850
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.