MD00G1037400.v1.1

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Forward (+)
6647091 .. 6647396
306 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1037400.v1.1.491

Sequence Viewer

Length: 306 bp
ATGGATTCTTTCCCTTATGCAAACTCTATCACTGCTGGTTTATTCACAATAATCATCGTGTCATATTACTTATCACGAAGATGGAGAGCTGCCAATCACAAGGGCAAATTGTCACCACCTGAAGCCAAGGGTGCATGGCCTATATTGGGTCACCTTCCTTTGTTAGGAGGCTCTACACCTCCTCACATAACTTTGGGAGCCATGGCGGACAAGTATGGACCCCTTTACACTATCCGCCTTGGCGTCTATCCGTCATTGGTGATAAGCAGCAGCGAGATCGCAAAAGAATGCTTCACAAACCAATGA

Protein Analysis

102

Amino Acids

11.01

Weight (kDa)

9.42

Isoelectric Point (pI)

56.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 40 - 99 4.8e-07 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 206, 235
AcuI CTGAAG 1 cut(s) 141
AcyI GRCGYC 1 cut(s) 243
AfiI CCNNNNNNNGG 2 cut(s) 146, 164
AluBI AGCT 1 cut(s) 89
AluI AGCT 1 cut(s) 89
AoxI GGCC 1 cut(s) 137
ApeKI GCWGC 3 cut(s) 89, 267, 270
AspS9I GGNCC 1 cut(s) 218
AsuHPI GGTGA 3 cut(s) 105, 143, 271
AvaII GGWCC 1 cut(s) 218
BbvI GCAGC 3 cut(s) 76, 279, 282
BccI CCATC 1 cut(s) 75
BcgI CGANNNNNNTGC 2 cut(s) 259, 293
BisI GCNGC 3 cut(s) 90, 268, 271
BlsI GCNGC 3 cut(s) 91, 269, 272
Bme18I GGWCC 1 cut(s) 218
BmgT120I GGNCC 1 cut(s) 218
BmiI GGNNCC 2 cut(s) 199, 220
BsaHI GRCGYC 1 cut(s) 243
BsaJI CCNNGG 3 cut(s) 126, 201, 238
Bsc4I CCNNNNNNNGG 2 cut(s) 146, 164
BseDI CCNNGG 3 cut(s) 126, 201, 238
BseLI CCNNNNNNNGG 2 cut(s) 146, 164
BseRI GAGGAG 1 cut(s) 171
BseXI GCAGC 3 cut(s) 76, 279, 282
BshFI GGCC 1 cut(s) 139
BslI CCNNNNNNNGG 2 cut(s) 146, 164
BsmI GAATGC 1 cut(s) 293
BsnI GGCC 1 cut(s) 139
Bsp143I GATC 1 cut(s) 276
Bsp19I CCATGG 1 cut(s) 201
BspACI CCGC 2 cut(s) 206, 235
BspANI GGCC 1 cut(s) 139
BspLI GGNNCC 2 cut(s) 199, 220
BssECI CCNNGG 3 cut(s) 126, 201, 238
BssMI GATC 1 cut(s) 276
BssNI GRCGYC 1 cut(s) 243
BssT1I CCWWGG 3 cut(s) 126, 201, 238
BstACI GRCGYC 1 cut(s) 243
BstDSI CCRYGG 1 cut(s) 201
BstEII GGTNACC 1 cut(s) 149
BstENI CCTNNNNNAGG 1 cut(s) 162
BstKTI GATC 1 cut(s) 279
BstMBI GATC 1 cut(s) 276
BstMWI GCNNNNNNNGC 1 cut(s) 131
BstPI GGTNACC 1 cut(s) 149
BstV1I GCAGC 3 cut(s) 76, 279, 282
BsuRI GGCC 1 cut(s) 139
BtgI CCRYGG 1 cut(s) 201
BtsI GCAGTG 1 cut(s) 30
BtsIMutI CAGTG 1 cut(s) 30
Cfr13I GGNCC 1 cut(s) 218
CseI GACGC 1 cut(s) 232
CviAII CATG 2 cut(s) 135, 202
CviJI RGCY 5 cut(s) 89, 125, 139, 171, 200
CviKI_1 RGCY 5 cut(s) 89, 125, 139, 171, 200
DpnI GATC 1 cut(s) 278
DpnII GATC 1 cut(s) 276
EciI GGCGGA 2 cut(s) 221, 224
Eco130I CCWWGG 3 cut(s) 126, 201, 238
Eco47I GGWCC 1 cut(s) 218
Eco57I CTGAAG 1 cut(s) 141
Eco91I GGTNACC 1 cut(s) 149
EcoNI CCTNNNNNAGG 1 cut(s) 162
EcoO65I GGTNACC 1 cut(s) 149
EcoT14I CCWWGG 3 cut(s) 126, 201, 238
ErhI CCWWGG 3 cut(s) 126, 201, 238
FaeI CATG 2 cut(s) 138, 205
FaiI YATR 7 cut(s) 18, 64, 136, 143, 188, 203, 216
FatI CATG 2 cut(s) 134, 201
Fnu4HI GCNGC 3 cut(s) 90, 268, 271
Fsp4HI GCNGC 3 cut(s) 90, 268, 271
GluI GCNGC 3 cut(s) 90, 268, 271
HaeIII GGCC 1 cut(s) 139
HgaI GACGC 1 cut(s) 232
Hin1I GRCGYC 1 cut(s) 243
Hin1II CATG 2 cut(s) 138, 205
HinfI GANTC 1 cut(s) 5
HphI GGTGA 3 cut(s) 105, 143, 271
Hpy188III TCNNGA 1 cut(s) 75
HpyAV CCTTC 1 cut(s) 164
HpyCH4V TGCA 2 cut(s) 20, 134
HpyF10VI GCNNNNNNNGC 1 cut(s) 131
Hsp92I GRCGYC 1 cut(s) 243
Hsp92II CATG 2 cut(s) 138, 205
Kzo9I GATC 1 cut(s) 276
LmnI GCTCC 1 cut(s) 197
LpnPI CCDG 2 cut(s) 21, 132
Lsp1109I GCAGC 3 cut(s) 76, 279, 282
MaeIII GTNAC 2 cut(s) 111, 149
MalI GATC 1 cut(s) 278
MboI GATC 1 cut(s) 276
MboII GAAGA 1 cut(s) 90
MluCI AATT 1 cut(s) 107
MnlI CCTC 3 cut(s) 161, 189, 192
MslI CAYNNNNRTG 1 cut(s) 79
Mva1269I GAATGC 1 cut(s) 293
MwoI GCNNNNNNNGC 1 cut(s) 131
NcoI CCATGG 1 cut(s) 201
NdeII GATC 1 cut(s) 276
NlaIII CATG 2 cut(s) 138, 205
NlaIV GGNNCC 2 cut(s) 199, 220
NmuCI GTSAC 2 cut(s) 111, 149
PctI GAATGC 1 cut(s) 293
PfeI GAWTC 1 cut(s) 5
PkrI GCNGC 3 cut(s) 91, 269, 272
PspEI GGTNACC 1 cut(s) 149
PspN4I GGNNCC 2 cut(s) 199, 220
PspPI GGNCC 1 cut(s) 218
RseI CAYNNNNRTG 1 cut(s) 79
SatI GCNGC 3 cut(s) 90, 268, 271
Sau3AI GATC 1 cut(s) 276
Sau96I GGNCC 1 cut(s) 218
SetI ASST 4 cut(s) 91, 121, 156, 181
SinI GGWCC 1 cut(s) 218
SmiMI CAYNNNNRTG 1 cut(s) 79
Sse9I AATT 1 cut(s) 107
SsiI CCGC 2 cut(s) 206, 235
StyI CCWWGG 3 cut(s) 126, 201, 238
TasI AATT 1 cut(s) 107
TfiI GAWTC 1 cut(s) 5
TscAI CASTG 1 cut(s) 37
TseFI GTSAC 2 cut(s) 111, 149
TseI GCWGC 3 cut(s) 89, 267, 270
Tsp45I GTSAC 2 cut(s) 111, 149
TspGWI ACGGA 1 cut(s) 240
TspRI CASTG 1 cut(s) 37
VpaK11BI GGWCC 1 cut(s) 218
XagI CCTNNNNNAGG 1 cut(s) 162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.