RLG00000035272

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
63957418 .. 63961734
4317 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035272

Sequence Viewer

Length: 504 bp
ATGAATTTTCTCATCTCCTATCTAAAGAACCCTATCATAGTTGTATTGCTTGTAATAATAACTATTTTCTATTGTTTGCTCTCAAGGAGTTGGAGAGTTTCCAAGGACATAACAGCTCCTGAAGCCAAGGGTGCATGTCCTATAATTGGTCACCTTCCCTTTTTAGGAGGGTCGACCAAGCCTCTTCACGAAGCCTTGGGAGCCATGGCTGACAAGTACGGACCCCTTTTCACCATCCTCCTTGGGATGCATCAATCTTTGATGGAAGAGAAGAAGGAAGCACGTCTAGTCCCGAATGCGCTGAGGGAGTTCTTTAACTTTATGGGGATGTTATTGGTGGGCGATGTGATTCCTCATCTTCGGTGGTTGGATTTAGGTGGACATGATAAAGCCATGAAGAAAACGGGAAAAGAATTGGACGCCATCATTGGAAATTGGGTGCAAGAGCAAAAGCAAAATAGAGCACTAGAAGGCGATACAGCTCATAATTGTAAAGGGGAGTAA

Protein Analysis

168

Amino Acids

18.64

Weight (kDa)

8.43

Isoelectric Point (pI)

36.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 173
AcsI RAATTY 1 cut(s) 4
AcuI CTGAAG 1 cut(s) 141
AcyI GRCGYC 1 cut(s) 420
AfaI GTAC 1 cut(s) 218
AfiI CCNNNNNNNGG 2 cut(s) 146, 164
AjiI CACGTC 1 cut(s) 284
AluBI AGCT 2 cut(s) 116, 482
AluI AGCT 2 cut(s) 116, 482
Alw21I GWGCWC 1 cut(s) 466
AlwNI CAGNNNCTG 1 cut(s) 119
ApoI RAATTY 1 cut(s) 4
AspLEI GCGC 1 cut(s) 301
AspS9I GGNCC 1 cut(s) 221
AsuHPI GGTGA 2 cut(s) 143, 223
AvaII GGWCC 1 cut(s) 221
Bbv12I GWGCWC 1 cut(s) 466
BbvCI CCTCAGC 1 cut(s) 302
BccI CCATC 3 cut(s) 242, 256, 431
BfaI CTAG 2 cut(s) 287, 467
Bme18I GGWCC 1 cut(s) 221
BmgBI CACGTC 1 cut(s) 284
BmgT120I GGNCC 1 cut(s) 221
BmiI GGNNCC 2 cut(s) 202, 223
BmsI GCATC 2 cut(s) 237, 259
Bpu10I CCTNAGC 1 cut(s) 302
BpuEI CTTGAG 1 cut(s) 67
BsaHI GRCGYC 1 cut(s) 420
BsaJI CCNNGG 5 cut(s) 102, 126, 195, 204, 241
Bsc4I CCNNNNNNNGG 2 cut(s) 146, 164
BseDI CCNNGG 5 cut(s) 102, 126, 195, 204, 241
BseGI GGATG 3 cut(s) 234, 252, 333
BseLI CCNNNNNNNGG 2 cut(s) 146, 164
BseMII CTCAG 1 cut(s) 293
BsiHKAI GWGCWC 1 cut(s) 466
BslFI GGGAC 1 cut(s) 275
BslI CCNNNNNNNGG 2 cut(s) 146, 164
BsmFI GGGAC 1 cut(s) 275
BsmI GAATGC 1 cut(s) 301
Bsp1286I GDGCHC 1 cut(s) 466
Bsp19I CCATGG 1 cut(s) 204
BspCNI CTCAG 1 cut(s) 294
BspLI GGNNCC 2 cut(s) 202, 223
BssECI CCNNGG 5 cut(s) 102, 126, 195, 204, 241
BssNI GRCGYC 1 cut(s) 420
BssT1I CCWWGG 5 cut(s) 102, 126, 195, 204, 241
Bst6I CTCTTC 2 cut(s) 189, 261
BstACI GRCGYC 1 cut(s) 420
BstDEI CTNAG 1 cut(s) 302
BstDSI CCRYGG 1 cut(s) 204
BstEII GGTNACC 1 cut(s) 149
BstF5I GGATG 3 cut(s) 234, 252, 333
BstHHI GCGC 1 cut(s) 301
BstMWI GCNNNNNNNGC 3 cut(s) 122, 131, 200
BstNSI RCATGY 1 cut(s) 138
BstPI GGTNACC 1 cut(s) 149
BtgI CCRYGG 1 cut(s) 204
BtgZI GCGATG 1 cut(s) 357
BtrI CACGTC 1 cut(s) 284
BtsCI GGATG 3 cut(s) 234, 252, 333
CaiI CAGNNNCTG 1 cut(s) 119
CfoI GCGC 1 cut(s) 301
Cfr13I GGNCC 1 cut(s) 221
CseI GACGC 1 cut(s) 428
Csp6I GTAC 1 cut(s) 217
CviAII CATG 4 cut(s) 135, 205, 383, 394
CviJI RGCY 8 cut(s) 116, 125, 181, 194, 203, 209, 392, 482
CviKI_1 RGCY 8 cut(s) 116, 125, 181, 194, 203, 209, 392, 482
CviQI GTAC 1 cut(s) 217
DdeI CTNAG 1 cut(s) 302
Eam1104I CTCTTC 2 cut(s) 189, 261
EarI CTCTTC 2 cut(s) 189, 261
Eco130I CCWWGG 5 cut(s) 102, 126, 195, 204, 241
Eco47I GGWCC 1 cut(s) 221
Eco57I CTGAAG 1 cut(s) 141
Eco91I GGTNACC 1 cut(s) 149
EcoO65I GGTNACC 1 cut(s) 149
EcoT14I CCWWGG 5 cut(s) 102, 126, 195, 204, 241
EcoT22I ATGCAT 1 cut(s) 252
ErhI CCWWGG 5 cut(s) 102, 126, 195, 204, 241
FaeI CATG 4 cut(s) 138, 208, 386, 397
FaiI YATR 9 cut(s) 38, 110, 136, 143, 206, 323, 384, 395, 486
FaqI GGGAC 1 cut(s) 275
FatI CATG 4 cut(s) 134, 204, 382, 393
FblI GTMKAC 1 cut(s) 173
FokI GGATG 3 cut(s) 221, 259, 340
FspBI CTAG 2 cut(s) 287, 467
GlaI GCGC 1 cut(s) 300
HgaI GACGC 1 cut(s) 428
HhaI GCGC 1 cut(s) 301
Hin1I GRCGYC 1 cut(s) 420
Hin1II CATG 4 cut(s) 138, 208, 386, 397
Hin6I GCGC 1 cut(s) 299
HinP1I GCGC 1 cut(s) 299
HincII GTYRAC 1 cut(s) 174
HindII GTYRAC 1 cut(s) 174
HinfI GANTC 1 cut(s) 349
HphI GGTGA 2 cut(s) 143, 223
Hpy166II GTNNAC 2 cut(s) 174, 380
Hpy188III TCNNGA 3 cut(s) 119, 188, 292
Hpy8I GTNNAC 2 cut(s) 174, 380
HpyAV CCTTC 3 cut(s) 164, 268, 464
HpyCH4IV ACGT 1 cut(s) 283
HpyCH4V TGCA 3 cut(s) 134, 250, 442
HpyF10VI GCNNNNNNNGC 3 cut(s) 122, 131, 200
HpyF3I CTNAG 1 cut(s) 302
HpySE526I ACGT 1 cut(s) 283
Hsp92I GRCGYC 1 cut(s) 420
Hsp92II CATG 4 cut(s) 138, 208, 386, 397
HspAI GCGC 1 cut(s) 299
LmnI GCTCC 2 cut(s) 121, 200
LpnPI CCDG 1 cut(s) 132
LweI GCATC 2 cut(s) 237, 259
MaeI CTAG 2 cut(s) 287, 467
MaeII ACGT 1 cut(s) 283
MaeIII GTNAC 1 cut(s) 149
MboII GAAGA 5 cut(s) 176, 278, 283, 350, 409
MhlI GDGCHC 1 cut(s) 466
MluCI AATT 5 cut(s) 4, 144, 413, 433, 487
MmeI TCCRAC 2 cut(s) 71, 348
MnlI CCTC 5 cut(s) 161, 192, 248, 297, 363
Mph1103I ATGCAT 1 cut(s) 252
MseI TTAA 1 cut(s) 315
Mva1269I GAATGC 1 cut(s) 301
MwoI GCNNNNNNNGC 3 cut(s) 122, 131, 200
NcoI CCATGG 1 cut(s) 204
NlaIII CATG 4 cut(s) 138, 208, 386, 397
NlaIV GGNNCC 2 cut(s) 202, 223
NmuCI GTSAC 1 cut(s) 149
NsiI ATGCAT 1 cut(s) 252
NspI RCATGY 1 cut(s) 138
PctI GAATGC 1 cut(s) 301
PfeI GAWTC 1 cut(s) 349
PspEI GGTNACC 1 cut(s) 149
PspN4I GGNNCC 2 cut(s) 202, 223
PspPI GGNCC 1 cut(s) 221
PstNI CAGNNNCTG 1 cut(s) 119
RsaI GTAC 1 cut(s) 218
RsaNI GTAC 1 cut(s) 217
SalI GTCGAC 1 cut(s) 172
SaqAI TTAA 1 cut(s) 315
Sau96I GGNCC 1 cut(s) 221
SduI GDGCHC 1 cut(s) 466
SetI ASST 5 cut(s) 118, 156, 286, 379, 484
SfaNI GCATC 2 cut(s) 237, 259
SinI GGWCC 1 cut(s) 221
SmlI CTYRAG 1 cut(s) 82
SmoI CTYRAG 1 cut(s) 82
Sse9I AATT 5 cut(s) 4, 144, 413, 433, 487
SspMI CTAG 2 cut(s) 287, 467
StyI CCWWGG 5 cut(s) 102, 126, 195, 204, 241
TaiI ACGT 1 cut(s) 286
TaqI TCGA 1 cut(s) 173
TasI AATT 5 cut(s) 4, 144, 413, 433, 487
TfiI GAWTC 1 cut(s) 349
Tru1I TTAA 1 cut(s) 315
Tru9I TTAA 1 cut(s) 315
TseFI GTSAC 1 cut(s) 149
Tsp45I GTSAC 1 cut(s) 149
TspDTI ATGAA 2 cut(s) 17, 410
TspGWI ACGGA 1 cut(s) 234
VpaK11BI GGWCC 1 cut(s) 221
XapI RAATTY 1 cut(s) 4
XceI RCATGY 1 cut(s) 138
XmiI GTMKAC 1 cut(s) 173
XspI CTAG 2 cut(s) 287, 467
Zsp2I ATGCAT 1 cut(s) 252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.