RLG00000017600

cytochrome P450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
18911221 .. 18911743
523 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017600

Sequence Viewer

Length: 363 bp
ATGGCAGCTGTGCAAATCATAGGCTATGACAATGCCATGTTTGGGTTTACTTCCTCGGGGCCATACTTGCGACAAATTCATAGATTGCGACTCTTGATCTGCTCTCCAACCACCGGCTTTAGATTCTCGGACACATTCGAGATGATTGTTGGAAAGCGCTACTGTATTACCACTGAAGAGAACCAAAAGGAAGAAGCGCGTCGAGTACATGATGCATTGAGAGAGTTTTCTTACTTTATCGAGGTTTTGGCGGTGGGTGATGCTCTTCCTTATCTTCAGTGGTTGGATTCAAGTGGACATGAGAAGGGGATGAAGAAAACTGCAAAGAAAATAGACGTCATTAAGTTCTATTCCTTTGCATAA

Protein Analysis

121

Amino Acids

13.81

Weight (kDa)

8.56

Isoelectric Point (pI)

47.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 339
AccII CGCG 1 cut(s) 199
AciI CCGC 1 cut(s) 251
AcsI RAATTY 1 cut(s) 75
AcuI CTGAAG 2 cut(s) 195, 260
AcyI GRCGYC 1 cut(s) 336
AfaI GTAC 1 cut(s) 207
AfeI AGCGCT 1 cut(s) 158
AfiI CCNNNNNNNGG 2 cut(s) 42, 113
AgsI TTSAA 1 cut(s) 291
AluBI AGCT 1 cut(s) 8
AluI AGCT 1 cut(s) 8
Ama87I CYCGRG 1 cut(s) 55
Aor51HI AGCGCT 1 cut(s) 158
AoxI GGCC 1 cut(s) 59
ApeKI GCWGC 1 cut(s) 5
ApoI RAATTY 1 cut(s) 75
AspLEI GCGC 2 cut(s) 159, 199
AspS9I GGNCC 1 cut(s) 59
AsuHPI GGTGA 1 cut(s) 269
AvaI CYCGRG 1 cut(s) 55
BbvI GCAGC 1 cut(s) 17
BfoI RGCGCY 1 cut(s) 160
BisI GCNGC 1 cut(s) 6
BlsI GCNGC 1 cut(s) 7
BmeT110I CYCGRG 1 cut(s) 55
BmgT120I GGNCC 1 cut(s) 59
BmiI GGNNCC 1 cut(s) 60
BmsI GCATC 2 cut(s) 202, 250
BsaHI GRCGYC 1 cut(s) 336
BsaJI CCNNGG 1 cut(s) 54
Bsc4I CCNNNNNNNGG 2 cut(s) 42, 113
Bse118I RCCGGY 1 cut(s) 113
BseDI CCNNGG 1 cut(s) 54
BseGI GGATG 1 cut(s) 315
BseLI CCNNNNNNNGG 2 cut(s) 42, 113
BseXI GCAGC 1 cut(s) 17
Bsh1236I CGCG 1 cut(s) 199
BshFI GGCC 1 cut(s) 61
BsiHKCI CYCGRG 1 cut(s) 55
BsiSI CCGG 1 cut(s) 114
BslI CCNNNNNNNGG 2 cut(s) 42, 113
BsnI GGCC 1 cut(s) 61
BsoBI CYCGRG 1 cut(s) 55
Bsp143I GATC 1 cut(s) 96
BspACI CCGC 1 cut(s) 251
BspANI GGCC 1 cut(s) 61
BspFNI CGCG 1 cut(s) 199
BspLI GGNNCC 1 cut(s) 60
BspQI GCTCTTC 1 cut(s) 270
BsrFI RCCGGY 1 cut(s) 113
BssAI RCCGGY 1 cut(s) 113
BssECI CCNNGG 1 cut(s) 54
BssMI GATC 1 cut(s) 96
BssNI GRCGYC 1 cut(s) 336
Bst4CI ACNGT 1 cut(s) 164
Bst6I CTCTTC 2 cut(s) 171, 270
BstACI GRCGYC 1 cut(s) 336
BstF5I GGATG 1 cut(s) 315
BstFNI CGCG 1 cut(s) 199
BstH2I RGCGCY 1 cut(s) 160
BstHHI GCGC 2 cut(s) 159, 199
BstKTI GATC 1 cut(s) 99
BstMBI GATC 1 cut(s) 96
BstMWI GCNNNNNNNGC 1 cut(s) 67
BstUI CGCG 1 cut(s) 199
BstV1I GCAGC 1 cut(s) 17
BsuRI GGCC 1 cut(s) 61
BtsCI GGATG 1 cut(s) 315
BtsIMutI CAGTG 2 cut(s) 171, 284
CfoI GCGC 2 cut(s) 159, 199
Cfr10I RCCGGY 1 cut(s) 113
Cfr13I GGNCC 1 cut(s) 59
CseI GACGC 1 cut(s) 188
Csp6I GTAC 1 cut(s) 206
CviAII CATG 3 cut(s) 37, 209, 299
CviJI RGCY 4 cut(s) 8, 24, 61, 117
CviKI_1 RGCY 4 cut(s) 8, 24, 61, 117
CviQI GTAC 1 cut(s) 206
DpnI GATC 1 cut(s) 98
DpnII GATC 1 cut(s) 96
Eam1104I CTCTTC 2 cut(s) 171, 270
EarI CTCTTC 2 cut(s) 171, 270
Eco47III AGCGCT 1 cut(s) 158
Eco57I CTGAAG 2 cut(s) 195, 260
Eco88I CYCGRG 1 cut(s) 55
EcoT22I ATGCAT 1 cut(s) 217
FaeI CATG 3 cut(s) 40, 212, 302
FaiI YATR 8 cut(s) 20, 27, 38, 64, 81, 210, 300, 361
FatI CATG 3 cut(s) 36, 208, 298
Fnu4HI GCNGC 1 cut(s) 6
FokI GGATG 1 cut(s) 322
Fsp4HI GCNGC 1 cut(s) 6
GlaI GCGC 2 cut(s) 158, 198
GluI GCNGC 1 cut(s) 6
HaeII RGCGCY 1 cut(s) 160
HaeIII GGCC 1 cut(s) 61
HapII CCGG 1 cut(s) 114
HgaI GACGC 1 cut(s) 188
HhaI GCGC 2 cut(s) 159, 199
Hin1I GRCGYC 1 cut(s) 336
Hin1II CATG 3 cut(s) 40, 212, 302
Hin6I GCGC 2 cut(s) 157, 197
HinP1I GCGC 2 cut(s) 157, 197
HinfI GANTC 3 cut(s) 90, 123, 287
HpaII CCGG 1 cut(s) 114
HphI GGTGA 1 cut(s) 269
Hpy166II GTNNAC 2 cut(s) 48, 296
Hpy188I TCNGA 1 cut(s) 130
Hpy188III TCNNGA 2 cut(s) 94, 139
Hpy8I GTNNAC 2 cut(s) 48, 296
Hpy99I CGWCG 1 cut(s) 204
HpyAV CCTTC 1 cut(s) 298
HpyCH4III ACNGT 1 cut(s) 164
HpyCH4IV ACGT 1 cut(s) 336
HpyCH4V TGCA 4 cut(s) 13, 215, 323, 359
HpyF10VI GCNNNNNNNGC 1 cut(s) 67
HpySE526I ACGT 1 cut(s) 336
Hsp92I GRCGYC 1 cut(s) 336
Hsp92II CATG 3 cut(s) 40, 212, 302
HspAI GCGC 2 cut(s) 157, 197
Kzo9I GATC 1 cut(s) 96
LguI GCTCTTC 1 cut(s) 270
LpnPI CCDG 1 cut(s) 127
Lsp1109I GCAGC 1 cut(s) 17
LweI GCATC 2 cut(s) 202, 250
MaeII ACGT 1 cut(s) 336
MalI GATC 1 cut(s) 98
MboI GATC 1 cut(s) 96
MboII GAAGA 5 cut(s) 188, 203, 257, 266, 325
MluCI AATT 1 cut(s) 75
MlyI GAGTC 1 cut(s) 84
MmeI TCCRAC 3 cut(s) 130, 131, 264
MnlI CCTC 2 cut(s) 64, 235
Mph1103I ATGCAT 1 cut(s) 217
MseI TTAA 1 cut(s) 342
MspA1I CMGCKG 1 cut(s) 8
MspI CCGG 1 cut(s) 114
MvnI CGCG 1 cut(s) 199
MwoI GCNNNNNNNGC 1 cut(s) 67
NdeII GATC 1 cut(s) 96
NlaIII CATG 3 cut(s) 40, 212, 302
NlaIV GGNNCC 1 cut(s) 60
NsiI ATGCAT 1 cut(s) 217
PciSI GCTCTTC 1 cut(s) 270
PfeI GAWTC 2 cut(s) 123, 287
PkrI GCNGC 1 cut(s) 7
PleI GAGTC 1 cut(s) 84
PpsI GAGTC 1 cut(s) 84
PspN4I GGNNCC 1 cut(s) 60
PspPI GGNCC 1 cut(s) 59
PvuII CAGCTG 1 cut(s) 8
RsaI GTAC 1 cut(s) 207
RsaNI GTAC 1 cut(s) 206
SapI GCTCTTC 1 cut(s) 270
SaqAI TTAA 1 cut(s) 342
SatI GCNGC 1 cut(s) 6
Sau3AI GATC 1 cut(s) 96
Sau96I GGNCC 1 cut(s) 59
SchI GAGTC 1 cut(s) 84
SetI ASST 3 cut(s) 10, 246, 339
SfaNI GCATC 2 cut(s) 202, 250
Sse9I AATT 1 cut(s) 75
SsiI CCGC 1 cut(s) 251
TaaI ACNGT 1 cut(s) 164
TaiI ACGT 1 cut(s) 339
TaqI TCGA 3 cut(s) 138, 202, 240
TasI AATT 1 cut(s) 75
TatI WGTACW 1 cut(s) 205
TfiI GAWTC 2 cut(s) 123, 287
Tru1I TTAA 1 cut(s) 342
Tru9I TTAA 1 cut(s) 342
TscAI CASTG 2 cut(s) 178, 284
TseI GCWGC 1 cut(s) 5
TspDTI ATGAA 2 cut(s) 68, 326
TspRI CASTG 2 cut(s) 178, 284
XapI RAATTY 1 cut(s) 75
ZraI GACGTC 1 cut(s) 337
Zsp2I ATGCAT 1 cut(s) 217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.