MD04G1043800.v1.1

Cytochrome p450

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
Physical Location & Seq
Forward (+)
5149501 .. 5149731
231 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1043800.v1.1.491

Sequence Viewer

Length: 231 bp
ATGGACTTCCACCTACCATCTCTTGTTACTTTTGTGGTAGCATCATTGGCCTTTTCATTGTTCCTCTACTCTATATATTTTCAGTCAAGAATAGCAGTCAGAAAACTACCACCACAAGCCGGAGGTGCATGGCTGATAATCGGTCACGTCCCCTTATTATTACGTTCATCTGAACCACTACATTTGTTGTTAGCTCAATTGGCGGACATGTATGGACCGATCTTCACTTAA

Protein Analysis

77

Amino Acids

8.47

Weight (kDa)

8.25

Isoelectric Point (pI)

50.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

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Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 203
AfiI CCNNNNNNNGG 1 cut(s) 119
AflIII ACRYGT 1 cut(s) 207
AjiI CACGTC 1 cut(s) 148
AluBI AGCT 1 cut(s) 194
AluI AGCT 1 cut(s) 194
AoxI GGCC 1 cut(s) 48
AspS9I GGNCC 1 cut(s) 215
AvaII GGWCC 1 cut(s) 215
BccI CCATC 1 cut(s) 25
Bme18I GGWCC 1 cut(s) 215
BmgBI CACGTC 1 cut(s) 148
BmgT120I GGNCC 1 cut(s) 215
BmsI GCATC 1 cut(s) 50
Bsc4I CCNNNNNNNGG 1 cut(s) 119
BseLI CCNNNNNNNGG 1 cut(s) 119
BshFI GGCC 1 cut(s) 50
BsiSI CCGG 1 cut(s) 120
BslFI GGGAC 1 cut(s) 134
BslI CCNNNNNNNGG 1 cut(s) 119
BsmFI GGGAC 1 cut(s) 134
BsnI GGCC 1 cut(s) 50
Bsp143I GATC 1 cut(s) 219
BspACI CCGC 1 cut(s) 203
BspANI GGCC 1 cut(s) 50
BssMI GATC 1 cut(s) 219
BstKTI GATC 1 cut(s) 222
BstMBI GATC 1 cut(s) 219
BstMWI GCNNNNNNNGC 3 cut(s) 47, 125, 200
BstNSI RCATGY 1 cut(s) 211
BsuRI GGCC 1 cut(s) 50
BtrI CACGTC 1 cut(s) 148
Cfr13I GGNCC 1 cut(s) 215
CspCI CAANNNNNGTGG 2 cut(s) 165, 200
CviAII CATG 2 cut(s) 129, 208
CviJI RGCY 4 cut(s) 50, 119, 133, 194
CviKI_1 RGCY 4 cut(s) 50, 119, 133, 194
DpnI GATC 1 cut(s) 221
DpnII GATC 1 cut(s) 219
EciI GGCGGA 1 cut(s) 218
Eco47I GGWCC 1 cut(s) 215
FaeI CATG 2 cut(s) 132, 211
FaiI YATR 5 cut(s) 74, 76, 130, 209, 213
FaqI GGGAC 1 cut(s) 134
FatI CATG 2 cut(s) 128, 207
HaeIII GGCC 1 cut(s) 50
HapII CCGG 1 cut(s) 120
Hin1II CATG 2 cut(s) 132, 211
HpaII CCGG 1 cut(s) 120
Hpy188I TCNGA 2 cut(s) 101, 172
Hpy188III TCNNGA 1 cut(s) 87
HpyCH4IV ACGT 2 cut(s) 147, 163
HpyCH4V TGCA 1 cut(s) 128
HpyF10VI GCNNNNNNNGC 3 cut(s) 47, 125, 200
HpySE526I ACGT 2 cut(s) 147, 163
Hsp92II CATG 2 cut(s) 132, 211
Kzo9I GATC 1 cut(s) 219
LpnPI CCDG 1 cut(s) 133
LweI GCATC 1 cut(s) 50
MaeII ACGT 2 cut(s) 147, 163
MaeIII GTNAC 2 cut(s) 25, 143
MalI GATC 1 cut(s) 221
MboI GATC 1 cut(s) 219
MboII GAAGA 1 cut(s) 214
MfeI CAATTG 1 cut(s) 197
MluCI AATT 1 cut(s) 197
MnlI CCTC 2 cut(s) 74, 116
MseI TTAA 1 cut(s) 229
MspI CCGG 1 cut(s) 120
MunI CAATTG 1 cut(s) 197
MwoI GCNNNNNNNGC 3 cut(s) 47, 125, 200
NdeII GATC 1 cut(s) 219
NlaIII CATG 2 cut(s) 132, 211
NmuCI GTSAC 1 cut(s) 143
NspI RCATGY 1 cut(s) 211
PciI ACATGT 1 cut(s) 207
PscI ACATGT 1 cut(s) 207
PspPI GGNCC 1 cut(s) 215
SaqAI TTAA 1 cut(s) 229
Sau3AI GATC 1 cut(s) 219
Sau96I GGNCC 1 cut(s) 215
SetI ASST 5 cut(s) 15, 127, 150, 166, 196
SfaNI GCATC 1 cut(s) 50
SgeI CNNG 7 cut(s) 35, 99, 128, 132, 141, 158, 220
SinI GGWCC 1 cut(s) 215
Sse9I AATT 1 cut(s) 197
SsiI CCGC 1 cut(s) 203
TaiI ACGT 2 cut(s) 150, 166
TaqII GACCGA 1 cut(s) 131
TasI AATT 1 cut(s) 197
Tru1I TTAA 1 cut(s) 229
Tru9I TTAA 1 cut(s) 229
TseFI GTSAC 1 cut(s) 143
Tsp45I GTSAC 1 cut(s) 143
TspDTI ATGAA 2 cut(s) 45, 156
VpaK11BI GGWCC 1 cut(s) 215
XceI RCATGY 1 cut(s) 211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.