RchiOBHm_Chr1g0359791

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
51634348 .. 51634878
531 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58482

Sequence Viewer

Length: 414 bp
ATGAATCCAGAGAAGACTGCAGTCTGCAGAATAGGTAACTATCATGTCACCTCAGGCACGCGTCTTCTTATCAACCTTTCGAAGATTCATTTGGATCAAAATGTCTGGCTCGACCCTCGTCTATTCCAACCAGAAAGGTTTCTTACAACTCACAAGAATGTTGATGTTAGGGGCCAGAGTTTTGAATTTATACCATTTGGAAGTGGTAGACGAATATGTCCAGGAATATCTCTAGCACTTCAAGTTACTCAACTTACACTGGCTCATTTAATTCATGGGTTTGAAATTACAGCCCCATCTGATGAACCACTTGATATGGGTGAGAGTTCAGGAATAACAAACATGAAGATAACCCCACTGGAGGTCTTTCTCACCCCACGCCTACATCTTAAACTTTATGAAAATGTTGACTAG

Protein Analysis

137

Amino Acids

15.48

Weight (kDa)

6.58

Isoelectric Point (pI)

25.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 9 - 113 6.9e-26 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 216
AccI GTMKAC 1 cut(s) 208
AccII CGCG 1 cut(s) 61
AclWI GGATC 1 cut(s) 102
AcsI RAATTY 1 cut(s) 185
AfiI CCNNNNNNNGG 1 cut(s) 361
AflIII ACRYGT 1 cut(s) 59
AgsI TTSAA 3 cut(s) 185, 242, 284
AjnI CCWGG 1 cut(s) 220
AjuI GAANNNNNNNTTGG 2 cut(s) 74, 106
AlwI GGATC 1 cut(s) 102
AoxI GGCC 1 cut(s) 172
ApoI RAATTY 1 cut(s) 185
Asp700I GAANNNNTTC 1 cut(s) 138
AspS9I GGNCC 1 cut(s) 172
AsuHPI GGTGA 3 cut(s) 40, 332, 364
AsuII TTCGAA 1 cut(s) 80
AxyI CCTNAGG 1 cut(s) 52
BbsI GAAGAC 2 cut(s) 20, 56
BccI CCATC 1 cut(s) 304
BciT130I CCWGG 1 cut(s) 222
BfaI CTAG 2 cut(s) 233, 412
BfmI CTRYAG 2 cut(s) 18, 25
Bme1390I CCNGG 1 cut(s) 222
BmgT120I GGNCC 1 cut(s) 172
BmiI GGNNCC 1 cut(s) 173
BmrFI CCNGG 1 cut(s) 222
BoxI GACNNNNGTC 2 cut(s) 20, 117
BpiI GAAGAC 2 cut(s) 20, 56
BpmI CTGGAG 1 cut(s) 380
Bpu14I TTCGAA 1 cut(s) 80
Bsc4I CCNNNNNNNGG 1 cut(s) 361
Bse1I ACTGG 2 cut(s) 264, 363
Bse21I CCTNAGG 1 cut(s) 52
BseBI CCWGG 1 cut(s) 222
BseLI CCNNNNNNNGG 1 cut(s) 361
BseMII CTCAG 1 cut(s) 66
BseNI ACTGG 2 cut(s) 264, 363
Bsh1236I CGCG 1 cut(s) 61
BshFI GGCC 1 cut(s) 174
BslI CCNNNNNNNGG 1 cut(s) 361
BsnI GGCC 1 cut(s) 174
Bsp119I TTCGAA 1 cut(s) 80
Bsp143I GATC 1 cut(s) 94
BspANI GGCC 1 cut(s) 174
BspCNI CTCAG 1 cut(s) 65
BspFNI CGCG 1 cut(s) 61
BspLI GGNNCC 1 cut(s) 173
BspMAI CTGCAG 2 cut(s) 22, 29
BspPI GGATC 1 cut(s) 102
BspT104I TTCGAA 1 cut(s) 80
BsrI ACTGG 2 cut(s) 264, 363
BssMI GATC 1 cut(s) 94
Bst2UI CCWGG 1 cut(s) 222
BstBI TTCGAA 1 cut(s) 80
BstC8I GCNNGC 1 cut(s) 59
BstDEI CTNAG 1 cut(s) 52
BstFNI CGCG 1 cut(s) 61
BstKTI GATC 1 cut(s) 97
BstMBI GATC 1 cut(s) 94
BstNI CCWGG 1 cut(s) 222
BstPAI GACNNNNGTC 2 cut(s) 20, 117
BstSCI CCNGG 1 cut(s) 220
BstSFI CTRYAG 2 cut(s) 18, 25
BstUI CGCG 1 cut(s) 61
BstV2I GAAGAC 2 cut(s) 20, 56
Bsu36I CCTNAGG 1 cut(s) 52
BsuRI GGCC 1 cut(s) 174
BtsIMutI CAGTG 2 cut(s) 257, 356
Cac8I GCNNGC 1 cut(s) 59
Cfr13I GGNCC 1 cut(s) 172
CseI GACGC 1 cut(s) 50
CviAII CATG 3 cut(s) 44, 275, 343
CviJI RGCY 4 cut(s) 109, 174, 263, 293
CviKI_1 RGCY 4 cut(s) 109, 174, 263, 293
DdeI CTNAG 1 cut(s) 52
DpnI GATC 1 cut(s) 96
DpnII GATC 1 cut(s) 94
DrdI GACNNNNNNGTC 1 cut(s) 216
DseDI GACNNNNNNGTC 1 cut(s) 216
Eco81I CCTNAGG 1 cut(s) 52
EcoRII CCWGG 1 cut(s) 220
FaeI CATG 3 cut(s) 47, 278, 346
FaiI YATR 7 cut(s) 45, 191, 217, 276, 317, 344, 399
FatI CATG 3 cut(s) 43, 274, 342
FblI GTMKAC 1 cut(s) 208
FspBI CTAG 2 cut(s) 233, 412
GsuI CTGGAG 1 cut(s) 380
HaeIII GGCC 1 cut(s) 174
HgaI GACGC 1 cut(s) 50
Hin1II CATG 3 cut(s) 47, 278, 346
HincII GTYRAC 1 cut(s) 409
HindII GTYRAC 1 cut(s) 409
HinfI GANTC 2 cut(s) 4, 85
HphI GGTGA 3 cut(s) 40, 332, 364
Hpy166II GTNNAC 2 cut(s) 209, 409
Hpy188I TCNGA 1 cut(s) 301
Hpy188III TCNNGA 2 cut(s) 8, 330
Hpy8I GTNNAC 2 cut(s) 209, 409
HpyCH4V TGCA 2 cut(s) 20, 27
HpyF3I CTNAG 1 cut(s) 52
Hsp92II CATG 3 cut(s) 47, 278, 346
Kzo9I GATC 1 cut(s) 94
MaeI CTAG 2 cut(s) 233, 412
MaeIII GTNAC 3 cut(s) 35, 46, 244
MalI GATC 1 cut(s) 96
MboI GATC 1 cut(s) 94
MboII GAAGA 4 cut(s) 25, 56, 94, 358
MluCI AATT 3 cut(s) 185, 270, 285
MluI ACGCGT 1 cut(s) 59
MmeI TCCRAC 1 cut(s) 151
MnlI CCTC 3 cut(s) 61, 126, 355
MroXI GAANNNNTTC 1 cut(s) 138
MseI TTAA 2 cut(s) 269, 390
MslI CAYNNNNRTG 1 cut(s) 156
MspR9I CCNGG 1 cut(s) 222
MvaI CCWGG 1 cut(s) 222
MvnI CGCG 1 cut(s) 61
NdeII GATC 1 cut(s) 94
NlaIII CATG 3 cut(s) 47, 278, 346
NlaIV GGNNCC 1 cut(s) 173
NmuCI GTSAC 1 cut(s) 46
NspV TTCGAA 1 cut(s) 80
PdmI GAANNNNTTC 1 cut(s) 138
PfeI GAWTC 2 cut(s) 4, 85
PfoI TCCNGGA 1 cut(s) 220
PshAI GACNNNNGTC 2 cut(s) 20, 117
Psp6I CCWGG 1 cut(s) 220
PspGI CCWGG 1 cut(s) 220
PspN4I GGNNCC 1 cut(s) 173
PspPI GGNCC 1 cut(s) 172
PstI CTGCAG 2 cut(s) 22, 29
RseI CAYNNNNRTG 1 cut(s) 156
SaqAI TTAA 2 cut(s) 269, 390
Sau3AI GATC 1 cut(s) 94
Sau96I GGNCC 1 cut(s) 172
ScrFI CCNGG 1 cut(s) 222
SetI ASST 5 cut(s) 37, 53, 78, 140, 366
SfcI CTRYAG 2 cut(s) 18, 25
SfuI TTCGAA 1 cut(s) 80
SmiMI CAYNNNNRTG 1 cut(s) 156
Sse9I AATT 3 cut(s) 185, 270, 285
SspMI CTAG 2 cut(s) 233, 412
StyD4I CCNGG 1 cut(s) 220
TaqI TCGA 2 cut(s) 80, 111
TasI AATT 3 cut(s) 185, 270, 285
TfiI GAWTC 2 cut(s) 4, 85
Tru1I TTAA 2 cut(s) 269, 390
Tru9I TTAA 2 cut(s) 269, 390
TscAI CASTG 2 cut(s) 264, 363
TseFI GTSAC 1 cut(s) 46
Tsp45I GTSAC 1 cut(s) 46
TspDTI ATGAA 6 cut(s) 17, 77, 263, 318, 359, 414
TspRI CASTG 2 cut(s) 264, 363
XapI RAATTY 1 cut(s) 185
XmiI GTMKAC 1 cut(s) 208
XmnI GAANNNNTTC 1 cut(s) 138
XspI CTAG 2 cut(s) 233, 412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.