RLG00000035275

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
64005893 .. 64006884
992 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035275

Sequence Viewer

Length: 861 bp
ATGGATTTTCTCATTCCCTATCTCACGAGCCCTAGCACGGTTGGATTGCTTGCAATAATAACTGTTTCCTATTGTTTAATCTCAAGGAGTTGGAGAGCTTCCAAGGGCAAAACAGCTCTTGAAGCCAAGCGTGCATGGCCTCTATTTGGTCACCTTCCCTTGTTAGGACGATCGGCCAAGCCTCTTCACACGGCCTTGGGAGCCATGACTGACAAGTTCGGTTTCACTGTCTGGCTTGGGGTGTATCAATCGCTAGTGGCGAGTAGTAGTGAGATGGCTAAGGAGTCCTTTACGATCAATGACACGTGCTTGTCCTCCCGCCCGAAAATGGCAGTTGCAAATCACATTGGCTATAACTACACAATGTTTGGGTTTGCACCCTATGGACCATACTGGCGTGAAATGCGTAAGATTACCACTTTAGAGTTGCTCTCCATCTGCCGGCTCAAGCTCTCAAACACATTCGAGTCTCCGAGGATGGTGGCTGGAAAGCGTTACTCTATTGCTAGCAACGAAGAAGAGAAGAACGAAGCACGTCGAGTTCAGAAGGCAGTGAAGGAGTTCTTGGACTTTATTGGGCTGTTTTTGGTGGGCGATGTGATTCCTTATCTTCAGTGGTTAGATTTAGGTGGACATGAGAAAGCCATGAAGAAAACGGGAAAAAAATTGGACGCCATTGTTGGAAAATGGGTGGAAAAGCATAAGCAAAAGAGAGCACTAGAAGGCAATGCGGCTCATAATTGTAAAGGGGAGCAAGACTTCATAGACACCATGATATTGATACTTGAGGGTGTTGTCCTCGGCGGTTTTGATGCGGATACCGTCAACAAAGCCACAACCTTGGTACTTACTTCTGTATAG

Protein Analysis

287

Amino Acids

31.85

Weight (kDa)

9.36

Isoelectric Point (pI)

35.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 44 - 146 6.5e-07 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 319, 731, 804, 815
AcoI YGGCCR 1 cut(s) 174
AcuI CTGAAG 1 cut(s) 596
AcvI CACGTG 1 cut(s) 306
AcyI GRCGYC 1 cut(s) 672
AfaI GTAC 1 cut(s) 846
AfiI CCNNNNNNNGG 5 cut(s) 37, 146, 164, 328, 441
AflIII ACRYGT 1 cut(s) 303
AgsI TTSAA 1 cut(s) 122
AjiI CACGTC 1 cut(s) 536
AjuI GAANNNNNNNTTGG 2 cut(s) 548, 580
AluBI AGCT 3 cut(s) 98, 116, 451
AluI AGCT 3 cut(s) 98, 116, 451
Alw21I GWGCWC 1 cut(s) 718
Alw26I GTCTC 1 cut(s) 474
AoxI GGCC 3 cut(s) 137, 174, 192
Asp700I GAANNNNTTC 1 cut(s) 560
AspS9I GGNCC 1 cut(s) 386
AsuHPI GGTGA 1 cut(s) 143
AsuNHI GCTAGC 1 cut(s) 506
AvaII GGWCC 1 cut(s) 386
BanII GRGCYC 1 cut(s) 32
BauI CACGAG 1 cut(s) 25
BbrPI CACGTG 1 cut(s) 306
Bbv12I GWGCWC 1 cut(s) 718
BccI CCATC 3 cut(s) 268, 443, 472
BceAI ACGGC 1 cut(s) 207
BciVI GTATCC 1 cut(s) 811
BcoDI GTCTC 1 cut(s) 474
BfaI CTAG 4 cut(s) 33, 254, 507, 719
BfuI GTATCC 1 cut(s) 811
BisI GCNGC 1 cut(s) 732
BlsI GCNGC 1 cut(s) 733
Bme18I GGWCC 1 cut(s) 386
BmgBI CACGTC 1 cut(s) 536
BmgT120I GGNCC 1 cut(s) 386
BmiI GGNNCC 1 cut(s) 202
BmsI GCATC 1 cut(s) 802
BmtI GCTAGC 1 cut(s) 510
BplI GAGNNNNNCTC 2 cut(s) 416, 448
Bpu10I CCTNAGC 1 cut(s) 279
BpuEI CTTGAG 3 cut(s) 67, 431, 806
BsaAI YACGTR 1 cut(s) 306
BsaHI GRCGYC 1 cut(s) 672
BsaJI CCNNGG 5 cut(s) 102, 195, 473, 799, 840
Bsc4I CCNNNNNNNGG 5 cut(s) 37, 146, 164, 328, 441
Bse118I RCCGGY 1 cut(s) 441
Bse1I ACTGG 1 cut(s) 398
Bse3DI GCAATG 1 cut(s) 733
BseDI CCNNGG 5 cut(s) 102, 195, 473, 799, 840
BseGI GGATG 1 cut(s) 483
BseLI CCNNNNNNNGG 5 cut(s) 37, 146, 164, 328, 441
BseMI GCAATG 1 cut(s) 733
BseNI ACTGG 1 cut(s) 398
Bsh1285I CGRYCG 1 cut(s) 173
BshFI GGCC 3 cut(s) 139, 176, 194
BsiEI CGRYCG 1 cut(s) 173
BsiHKAI GWGCWC 1 cut(s) 718
BsiSI CCGG 1 cut(s) 442
BslI CCNNNNNNNGG 5 cut(s) 37, 146, 164, 328, 441
BsmAI GTCTC 1 cut(s) 474
BsnI GGCC 3 cut(s) 139, 176, 194
Bsp1286I GDGCHC 2 cut(s) 32, 718
Bsp143I GATC 2 cut(s) 170, 294
BspACI CCGC 4 cut(s) 319, 731, 804, 815
BspANI GGCC 3 cut(s) 139, 176, 194
BspLI GGNNCC 1 cut(s) 202
BspOI GCTAGC 1 cut(s) 510
BsrDI GCAATG 1 cut(s) 733
BsrFI RCCGGY 1 cut(s) 441
BsrI ACTGG 1 cut(s) 398
BssAI RCCGGY 1 cut(s) 441
BssECI CCNNGG 5 cut(s) 102, 195, 473, 799, 840
BssMI GATC 2 cut(s) 170, 294
BssNI GRCGYC 1 cut(s) 672
BssSI CACGAG 1 cut(s) 25
BssT1I CCWWGG 3 cut(s) 102, 195, 840
Bst2BI CACGAG 1 cut(s) 25
Bst4CI ACNGT 4 cut(s) 40, 64, 229, 823
Bst6I CTCTTC 2 cut(s) 189, 513
BstACI GRCGYC 1 cut(s) 672
BstBAI YACGTR 1 cut(s) 306
BstC8I GCNNGC 4 cut(s) 51, 132, 443, 508
BstDEI CTNAG 1 cut(s) 279
BstEII GGTNACC 1 cut(s) 149
BstF5I GGATG 1 cut(s) 483
BstKTI GATC 2 cut(s) 173, 297
BstMAI GTCTC 1 cut(s) 474
BstMBI GATC 2 cut(s) 170, 294
BstMCI CGRYCG 1 cut(s) 173
BstMWI GCNNNNNNNGC 5 cut(s) 122, 131, 136, 200, 403
BstPI GGTNACC 1 cut(s) 149
BstXI CCANNNNNNTGG 1 cut(s) 841
BsuI GTATCC 1 cut(s) 811
BsuRI GGCC 3 cut(s) 139, 176, 194
BtgZI GCGATG 1 cut(s) 609
BtrI CACGTC 1 cut(s) 536
BtsCI GGATG 1 cut(s) 483
BtsI GCAGTG 1 cut(s) 558
BtsIMutI CAGTG 3 cut(s) 225, 558, 620
Cac8I GCNNGC 4 cut(s) 51, 132, 443, 508
Cfr10I RCCGGY 1 cut(s) 441
Cfr13I GGNCC 1 cut(s) 386
CseI GACGC 1 cut(s) 680
Csp6I GTAC 1 cut(s) 845
CviAII CATG 5 cut(s) 135, 205, 635, 646, 772
CviQI GTAC 1 cut(s) 845
DdeI CTNAG 1 cut(s) 279
DpnI GATC 2 cut(s) 172, 296
DpnII GATC 2 cut(s) 170, 294
EaeI YGGCCR 1 cut(s) 174
Eam1104I CTCTTC 2 cut(s) 189, 513
EarI CTCTTC 2 cut(s) 189, 513
Eco130I CCWWGG 3 cut(s) 102, 195, 840
Eco24I GRGCYC 1 cut(s) 32
Eco47I GGWCC 1 cut(s) 386
Eco57I CTGAAG 1 cut(s) 596
Eco72I CACGTG 1 cut(s) 306
Eco91I GGTNACC 1 cut(s) 149
EcoO65I GGTNACC 1 cut(s) 149
EcoT14I CCWWGG 3 cut(s) 102, 195, 840
EcoT38I GRGCYC 1 cut(s) 32
ErhI CCWWGG 3 cut(s) 102, 195, 840
FaeI CATG 5 cut(s) 138, 208, 638, 649, 775
FalI AAGNNNNNCTT 4 cut(s) 272, 304, 548, 580
FatI CATG 5 cut(s) 134, 204, 634, 645, 771
FauI CCCGC 1 cut(s) 326
Fnu4HI GCNGC 1 cut(s) 732
FokI GGATG 1 cut(s) 490
FriOI GRGCYC 1 cut(s) 32
Fsp4HI GCNGC 1 cut(s) 732
FspBI CTAG 4 cut(s) 33, 254, 507, 719
GluI GCNGC 1 cut(s) 732
HaeIII GGCC 3 cut(s) 139, 176, 194
HapII CCGG 1 cut(s) 442
HgaI GACGC 1 cut(s) 680
Hin1I GRCGYC 1 cut(s) 672
Hin1II CATG 5 cut(s) 138, 208, 638, 649, 775
HincII GTYRAC 1 cut(s) 826
HindII GTYRAC 1 cut(s) 826
HinfI GANTC 3 cut(s) 284, 467, 601
HpaII CCGG 1 cut(s) 442
HphI GGTGA 1 cut(s) 143
Hpy166II GTNNAC 2 cut(s) 632, 826
Hpy188I TCNGA 2 cut(s) 474, 546
Hpy188III TCNNGA 2 cut(s) 25, 119
Hpy8I GTNNAC 2 cut(s) 632, 826
Hpy99I CGWCG 1 cut(s) 540
HpyAV CCTTC 4 cut(s) 164, 541, 550, 716
HpyCH4III ACNGT 4 cut(s) 40, 64, 229, 823
HpyCH4IV ACGT 2 cut(s) 305, 535
HpyCH4V TGCA 4 cut(s) 53, 134, 338, 377
HpyF10VI GCNNNNNNNGC 5 cut(s) 122, 131, 136, 200, 403
HpyF3I CTNAG 1 cut(s) 279
HpySE526I ACGT 2 cut(s) 305, 535
Hsp92I GRCGYC 1 cut(s) 672
Hsp92II CATG 5 cut(s) 138, 208, 638, 649, 775
KroI GCCGGC 1 cut(s) 441
KroNI GCCGGC 1 cut(s) 443
Kzo9I GATC 2 cut(s) 170, 294
LmnI GCTCC 2 cut(s) 200, 751
LpnPI CCDG 4 cut(s) 217, 379, 455, 471
LweI GCATC 1 cut(s) 802
MaeI CTAG 4 cut(s) 33, 254, 507, 719
MaeII ACGT 2 cut(s) 305, 535
MaeIII GTNAC 2 cut(s) 149, 494
MalI GATC 2 cut(s) 172, 296
MboI GATC 2 cut(s) 170, 294
MboII GAAGA 6 cut(s) 176, 527, 530, 535, 602, 661
MhlI GDGCHC 2 cut(s) 32, 718
MluCI AATT 2 cut(s) 665, 739
MlyI GAGTC 2 cut(s) 293, 476
MmeI TCCRAC 3 cut(s) 22, 71, 661
MnlI CCTC 6 cut(s) 150, 192, 325, 468, 781, 809
MroNI GCCGGC 1 cut(s) 441
MroXI GAANNNNTTC 1 cut(s) 560
MseI TTAA 1 cut(s) 77
MspI CCGG 1 cut(s) 442
MwoI GCNNNNNNNGC 5 cut(s) 122, 131, 136, 200, 403
NaeI GCCGGC 1 cut(s) 443
NdeII GATC 2 cut(s) 170, 294
NgoMIV GCCGGC 1 cut(s) 441
NheI GCTAGC 1 cut(s) 506
NlaIII CATG 5 cut(s) 138, 208, 638, 649, 775
NlaIV GGNNCC 1 cut(s) 202
NmeAIII GCCGAG 1 cut(s) 780
NmuCI GTSAC 1 cut(s) 149
PcsI WCGNNNNNNNCGW 1 cut(s) 257
PdiI GCCGGC 1 cut(s) 443
PdmI GAANNNNTTC 1 cut(s) 560
PfeI GAWTC 1 cut(s) 601
PkrI GCNGC 1 cut(s) 733
Ple19I CGATCG 1 cut(s) 173
PleI GAGTC 2 cut(s) 292, 475
PmaCI CACGTG 1 cut(s) 306
PmlI CACGTG 1 cut(s) 306
PpsI GAGTC 2 cut(s) 292, 475
Ppu21I YACGTR 1 cut(s) 306
PspCI CACGTG 1 cut(s) 306
PspEI GGTNACC 1 cut(s) 149
PspN4I GGNNCC 1 cut(s) 202
PspPI GGNCC 1 cut(s) 386
PvuI CGATCG 1 cut(s) 173
RsaI GTAC 1 cut(s) 846
RsaNI GTAC 1 cut(s) 845
SaqAI TTAA 1 cut(s) 77
SatI GCNGC 1 cut(s) 732
Sau3AI GATC 2 cut(s) 170, 294
Sau96I GGNCC 1 cut(s) 386
SchI GAGTC 2 cut(s) 293, 476
SduI GDGCHC 2 cut(s) 32, 718
SetI ASST 8 cut(s) 100, 118, 156, 308, 453, 538, 631, 842
SfaNI GCATC 1 cut(s) 802
SinI GGWCC 1 cut(s) 386
SmlI CTYRAG 3 cut(s) 82, 446, 785
SmoI CTYRAG 3 cut(s) 82, 446, 785
Sse9I AATT 2 cut(s) 665, 739
SsiI CCGC 4 cut(s) 319, 731, 804, 815
SspMI CTAG 4 cut(s) 33, 254, 507, 719
StyI CCWWGG 3 cut(s) 102, 195, 840
TaaI ACNGT 4 cut(s) 40, 64, 229, 823
TaiI ACGT 2 cut(s) 308, 538
TaqI TCGA 2 cut(s) 465, 538
TasI AATT 2 cut(s) 665, 739
TauI GCSGC 1 cut(s) 734
TfiI GAWTC 1 cut(s) 601
Tru1I TTAA 1 cut(s) 77
Tru9I TTAA 1 cut(s) 77
TscAI CASTG 3 cut(s) 232, 558, 620
TseFI GTSAC 1 cut(s) 149
Tsp45I GTSAC 1 cut(s) 149
TspDTI ATGAA 2 cut(s) 662, 751
TspRI CASTG 3 cut(s) 232, 558, 620
VpaK11BI GGWCC 1 cut(s) 386
XmnI GAANNNNTTC 1 cut(s) 560
XspI CTAG 4 cut(s) 33, 254, 507, 719
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.