FvH4_2g40560

cytochrome P450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000137
Physical Location & Seq
Reverse (-)
28898745 .. 28900666
1922 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g40560.t1

Sequence Viewer

Length: 1572 bp
ATGGATCTCCTCCTTGATCAGATGAACTTATATGTCACAACTGGTTTAATATTCGCAATAACATTCGCTCTCTATTTTTATTATTTTTCACAGAGATGGAGAAGGAGCAGATTACCAGCACCTCAAGCCAAGGGAGCATGGCCTATACTTGGCCACCTTCCGTTGCTAGGAGGATCGACGCCTCCCCAAATCATCTTGGGAGCCATGGCAGACAAGTATGGTCCCCTTTTTACGGTGCGCCTCGGAGTCTATCCAACTTTGGTGGTGAGCAGTAGTGAAGTGGCTAAGGAGTGCTTTACAATCCATGACATGGCTGCGTCTTCGCGCCCCAAAATGGCAGCTGTGGAACTCATAGGCTACAACTACGCCATGTTTGGAATGGGGCCCTCCGGACCATATTGGCGAGAAGTGCGTAAACTAGCAACCTTGAAGCTGCTCTCCAACCGCCAGATGCAGTTGCTTAAAGACATTCGTGTCTCCGAGGTGGCTACCTTCCTGAAAGAATTGTTCAAATGTACAGATCATAATCATGTAGATTTGGTGGAGTTGAAACAATGGTTTGGGGACTTGACTCTTAACGTTACACTTAGAATGGTAGCTGGAAAACGCTACTCGTTCATTAGTGATTCCGCCAGTGAGGATGAGAAGAAAGAAGCACGGCGCGTGCAGGATGCAGTGAGGAAGTTCTTTTACTTTGCTGGGGTGTTTATGGTGGGCGATTTGGTTCCTTACCTTCGGTGGTTGGATTTAGGTGGTCATGAAAAGGCCATGAAGAAAACTGCAAAAGAAATCGACGCTATCATTGAGGAGTGGTTACAAGAGCATAAACAAAGGAGAAGAGCCGGTGACACCGGAGAGCATGACTTCATGGACGCCATGCTTACTGAGCTTCAAGGTGCAGACCTTGGCGGTTACGAAGCGGATACAGTCAACAAAGCCACATGCTTGAATATGATTTTAGGAGGCAGCGATACCACCATGGTTACATTGATATGGGCAATATCTCTATTATTGAATAATCGTCATGTATTGAAACAAGCTCAAGATGAGTTGGATGCAGAAGTCGGCAGAGAAAGATTTGTGACCGAGTCGGATACAGGCAAGCTGGTTTATATCCAAGCCATAGTGAAAGAAACGCTGCGTTTATACCCTGCAGTACCATTATCAGCACAGCATGAGTTCACTGAGGACTCCACAGTGAATGGCTATCATGTCCAAAAGGGCACCCGCTTGATCACGAACCTTTGGAAGATTCAAACCAACCCACAAATGTGGCCCGACCCATTAGAGTTCAAACCGGAGAGATTTCTCACCACCCACAAGAACATTGATGTTAGGGGTCATCATTTTGAACTAATCCCTTTCGGAAGTGGTAGAAGATCTTGTCCTGGGATATCGTTTGCTCTTCAGATGGTATCATTTGCTTTAGCTAGCTTTTTACATGCATTCGAAGTTTCAACACCATCAAATGAGCTTGTTGATATGTCTGAGAGTTTTGGACTTACAAATGTTAAGGCCACCCCTCTAAACGTCCTAATCAAACCTCGCTTGTGTTCTAAACTTTATGAATAA

Protein Analysis

524

Amino Acids

59.21

Weight (kDa)

7.24

Isoelectric Point (pI)

41.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 41 - 500 8.1e-90 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 473
AccB1I GGYRCC 1 cut(s) 1223
AccB7I CCANNNNNTGG 1 cut(s) 310
AccII CGCG 2 cut(s) 325, 663
AccIII TCCGGA 1 cut(s) 389
AciI CCGC 5 cut(s) 445, 630, 909, 920, 1228
AclI AACGTT 1 cut(s) 579
AclWI GGATC 2 cut(s) 12, 181
AcoI YGGCCR 1 cut(s) 151
AcuI CTGAAG 1 cut(s) 1391
AcyI GRCGYC 2 cut(s) 179, 873
AfaI GTAC 2 cut(s) 517, 1158
AfiI CCNNNNNNNGG 5 cut(s) 149, 167, 232, 310, 334
AjnI CCWGG 1 cut(s) 1387
AleI CACNNNNGTG 1 cut(s) 1270
AluBI AGCT 9 cut(s) 341, 433, 599, 889, 1040, 1105, 1430, 1434, 1474
AluI AGCT 9 cut(s) 341, 433, 599, 889, 1040, 1105, 1430, 1434, 1474
Alw26I GTCTC 1 cut(s) 481
AlwI GGATC 2 cut(s) 12, 181
Aor13HI TCCGGA 1 cut(s) 389
AoxI GGCC 6 cut(s) 140, 151, 383, 765, 1274, 1515
ApaI GGGCCC 1 cut(s) 387
ApeKI GCWGC 5 cut(s) 314, 338, 433, 966, 1138
AspLEI GCGC 3 cut(s) 240, 327, 663
AspS9I GGNCC 5 cut(s) 221, 383, 384, 392, 1275
AsuHPI GGTGA 3 cut(s) 277, 857, 1303
AsuII TTCGAA 1 cut(s) 1449
AsuNHI GCTAGC 1 cut(s) 1430
AvaII GGWCC 2 cut(s) 221, 392
BaeGI GKGCMC 2 cut(s) 387, 1226
BalI TGGCCA 1 cut(s) 153
BanI GGYRCC 1 cut(s) 1223
BanII GRGCYC 1 cut(s) 387
BarI GAAGNNNNNNTAC 2 cut(s) 674, 706
BbsI GAAGAC 1 cut(s) 312
BbvI GCAGC 5 cut(s) 301, 350, 420, 978, 1125
BccI CCATC 3 cut(s) 90, 1405, 1471
BceAI ACGGC 1 cut(s) 674
BciT130I CCWGG 1 cut(s) 1389
BciVI GTATCC 2 cut(s) 916, 1087
BclI TGATCA 2 cut(s) 16, 1233
BcoDI GTCTC 1 cut(s) 481
BfaI CTAG 3 cut(s) 167, 419, 1431
BfmI CTRYAG 1 cut(s) 1152
BfuI GTATCC 2 cut(s) 916, 1087
BglII AGATCT 1 cut(s) 1379
BisI GCNGC 5 cut(s) 315, 339, 434, 967, 1139
BlsI GCNGC 5 cut(s) 316, 340, 435, 968, 1140
Bme1390I CCNGG 1 cut(s) 1389
Bme18I GGWCC 2 cut(s) 221, 392
BmgT120I GGNCC 5 cut(s) 221, 383, 384, 392, 1275
BmiI GGNNCC 6 cut(s) 202, 223, 384, 385, 726, 1225
BmrFI CCNGG 1 cut(s) 1389
BmsI GCATC 3 cut(s) 441, 661, 1045
BmtI GCTAGC 1 cut(s) 1434
BpiI GAAGAC 1 cut(s) 312
Bpu10I CCTNAGC 1 cut(s) 285
Bpu14I TTCGAA 1 cut(s) 1449
BpuEI CTTGAG 2 cut(s) 108, 1026
BsaBI GATNNNNATC 1 cut(s) 525
BsaHI GRCGYC 2 cut(s) 179, 873
BsaJI CCNNGG 7 cut(s) 129, 204, 241, 480, 904, 978, 1388
BsaWI WCCGGW 3 cut(s) 389, 851, 1297
Bsc4I CCNNNNNNNGG 5 cut(s) 149, 167, 232, 310, 334
Bse118I RCCGGY 1 cut(s) 842
Bse1I ACTGG 2 cut(s) 46, 633
Bse8I GATNNNNATC 1 cut(s) 525
BseAI TCCGGA 1 cut(s) 389
BseBI CCWGG 1 cut(s) 1389
BseDI CCNNGG 7 cut(s) 129, 204, 241, 480, 904, 978, 1388
BseGI GGATG 3 cut(s) 646, 676, 1060
BseJI GATNNNNATC 1 cut(s) 525
BseLI CCNNNNNNNGG 5 cut(s) 149, 167, 232, 310, 334
BseMII CTCAG 3 cut(s) 876, 1176, 1479
BseNI ACTGG 2 cut(s) 46, 633
BseRI GAGGAG 1 cut(s) 821
BseSI GKGCMC 2 cut(s) 387, 1226
BseXI GCAGC 5 cut(s) 301, 350, 420, 978, 1125
BseYI CCCAGC 1 cut(s) 698
BsgI GTGCAG 2 cut(s) 686, 918
Bsh1236I CGCG 2 cut(s) 325, 663
BshFI GGCC 6 cut(s) 142, 153, 385, 767, 1276, 1517
BshNI GGYRCC 1 cut(s) 1223
BsiSI CCGG 4 cut(s) 390, 843, 852, 1298
BslFI GGGAC 2 cut(s) 207, 578
BslI CCNNNNNNNGG 5 cut(s) 149, 167, 232, 310, 334
BsmAI GTCTC 1 cut(s) 481
BsmFI GGGAC 2 cut(s) 207, 578
BsmI GAATGC 1 cut(s) 1445
BsnI GGCC 6 cut(s) 142, 153, 385, 767, 1276, 1517
Bsp119I TTCGAA 1 cut(s) 1449
Bsp120I GGGCCC 1 cut(s) 383
Bsp1286I GDGCHC 2 cut(s) 387, 1226
Bsp13I TCCGGA 1 cut(s) 389
Bsp1407I TGTACA 1 cut(s) 515
Bsp143I GATC 6 cut(s) 4, 16, 173, 520, 1233, 1379
Bsp19I CCATGG 2 cut(s) 204, 978
BspACI CCGC 5 cut(s) 445, 630, 909, 920, 1228
BspANI GGCC 6 cut(s) 142, 153, 385, 767, 1276, 1517
BspCNI CTCAG 3 cut(s) 877, 1177, 1480
BspEI TCCGGA 1 cut(s) 389
BspFNI CGCG 2 cut(s) 325, 663
BspHI TCATGA 1 cut(s) 757
BspLI GGNNCC 6 cut(s) 202, 223, 384, 385, 726, 1225
BspMAI CTGCAG 1 cut(s) 1156
BspOI GCTAGC 1 cut(s) 1434
BspPI GGATC 2 cut(s) 12, 181
BspQI GCTCTTC 2 cut(s) 832, 1410
BspT104I TTCGAA 1 cut(s) 1449
BspT107I GGYRCC 1 cut(s) 1223
BsrFI RCCGGY 1 cut(s) 842
BsrGI TGTACA 1 cut(s) 515
BsrI ACTGG 2 cut(s) 46, 633
BssAI RCCGGY 1 cut(s) 842
BssECI CCNNGG 7 cut(s) 129, 204, 241, 480, 904, 978, 1388
BssMI GATC 6 cut(s) 4, 16, 173, 520, 1233, 1379
BssNI GRCGYC 2 cut(s) 179, 873
BssT1I CCWWGG 4 cut(s) 129, 204, 904, 978
Bst2UI CCWGG 1 cut(s) 1389
Bst4CI ACNGT 3 cut(s) 235, 928, 1198
Bst6I CTCTTC 2 cut(s) 832, 1410
BstACI GRCGYC 2 cut(s) 179, 873
BstAUI TGTACA 1 cut(s) 515
BstBI TTCGAA 1 cut(s) 1449
BstC8I GCNNGC 3 cut(s) 665, 1103, 1432
BstDEI CTNAG 5 cut(s) 285, 587, 885, 1185, 1488
BstDSI CCRYGG 2 cut(s) 204, 978
BstF5I GGATG 3 cut(s) 646, 676, 1060
BstFNI CGCG 2 cut(s) 325, 663
BstHHI GCGC 3 cut(s) 240, 327, 663
BstKTI GATC 6 cut(s) 7, 19, 176, 523, 1236, 1382
BstMAI GTCTC 1 cut(s) 481
BstMBI GATC 6 cut(s) 4, 16, 173, 520, 1233, 1379
BstMWI GCNNNNNNNGC 4 cut(s) 125, 134, 409, 886
BstNI CCWGG 1 cut(s) 1389
BstNSI RCATGY 2 cut(s) 945, 1445
BstSCI CCNGG 1 cut(s) 1387
BstSFI CTRYAG 1 cut(s) 1152
BstSLI GKGCMC 2 cut(s) 387, 1226
BstUI CGCG 2 cut(s) 325, 663
BstV1I GCAGC 5 cut(s) 301, 350, 420, 978, 1125
BstV2I GAAGAC 1 cut(s) 312
BstX2I RGATCY 2 cut(s) 4, 1379
BstXI CCANNNNNNTGG 1 cut(s) 1272
BstYI RGATCY 2 cut(s) 4, 1379
BsuI GTATCC 2 cut(s) 916, 1087
BsuRI GGCC 6 cut(s) 142, 153, 385, 767, 1276, 1517
BtgI CCRYGG 2 cut(s) 204, 978
BtsCI GGATG 3 cut(s) 646, 676, 1060
BtsI GCAGTG 1 cut(s) 681
BtsIMutI CAGTG 4 cut(s) 640, 681, 1182, 1203
Cac8I GCNNGC 3 cut(s) 665, 1103, 1432
CciI TCATGA 1 cut(s) 757
CfoI GCGC 3 cut(s) 240, 327, 663
Cfr10I RCCGGY 1 cut(s) 842
Cfr13I GGNCC 5 cut(s) 221, 383, 384, 392, 1275
CseI GACGC 4 cut(s) 187, 306, 803, 881
Csp6I GTAC 2 cut(s) 516, 1157
CspCI CAANNNNNGTGG 2 cut(s) 243, 278
CviQI GTAC 2 cut(s) 516, 1157
DdeI CTNAG 5 cut(s) 285, 587, 885, 1185, 1488
DpnI GATC 6 cut(s) 6, 18, 175, 522, 1235, 1381
DpnII GATC 6 cut(s) 4, 16, 173, 520, 1233, 1379
DrdI GACNNNNNNGTC 1 cut(s) 473
DseDI GACNNNNNNGTC 1 cut(s) 473
EaeI YGGCCR 1 cut(s) 151
Eam1104I CTCTTC 2 cut(s) 832, 1410
EarI CTCTTC 2 cut(s) 832, 1410
EciI GGCGGA 1 cut(s) 619
Eco130I CCWWGG 4 cut(s) 129, 204, 904, 978
Eco24I GRGCYC 1 cut(s) 387
Eco32I GATATC 1 cut(s) 1395
Eco47I GGWCC 2 cut(s) 221, 392
Eco57I CTGAAG 1 cut(s) 1391
EcoO109I RGGNCCY 2 cut(s) 383, 384
EcoRII CCWGG 1 cut(s) 1387
EcoRV GATATC 1 cut(s) 1395
EcoT14I CCWWGG 4 cut(s) 129, 204, 904, 978
EcoT22I ATGCAT 1 cut(s) 1447
EcoT38I GRGCYC 1 cut(s) 387
ErhI CCWWGG 4 cut(s) 129, 204, 904, 978
FalI AAGNNNNNCTT 2 cut(s) 278, 310
FaqI GGGAC 2 cut(s) 207, 578
FauI CCCGC 1 cut(s) 1235
FbaI TGATCA 2 cut(s) 16, 1233
Fnu4HI GCNGC 5 cut(s) 315, 339, 434, 967, 1139
FokI GGATG 3 cut(s) 653, 683, 1067
FriOI GRGCYC 1 cut(s) 387
Fsp4HI GCNGC 5 cut(s) 315, 339, 434, 967, 1139
FspBI CTAG 3 cut(s) 167, 419, 1431
GlaI GCGC 3 cut(s) 239, 326, 662
GluI GCNGC 5 cut(s) 315, 339, 434, 967, 1139
GsaI CCCAGC 1 cut(s) 702
HaeIII GGCC 6 cut(s) 142, 153, 385, 767, 1276, 1517
HapII CCGG 4 cut(s) 390, 843, 852, 1298
HgaI GACGC 4 cut(s) 187, 306, 803, 881
HhaI GCGC 3 cut(s) 240, 327, 663
Hin1I GRCGYC 2 cut(s) 179, 873
Hin6I GCGC 3 cut(s) 238, 325, 661
HinP1I GCGC 3 cut(s) 238, 325, 661
HincII GTYRAC 1 cut(s) 931
HindII GTYRAC 1 cut(s) 931
HinfI GANTC 6 cut(s) 246, 571, 626, 1088, 1190, 1252
HpaII CCGG 4 cut(s) 390, 843, 852, 1298
HphI GGTGA 3 cut(s) 277, 857, 1303
Hpy166II GTNNAC 3 cut(s) 416, 931, 1182
Hpy188I TCNGA 7 cut(s) 21, 245, 481, 1093, 1367, 1410, 1489
Hpy188III TCNNGA 5 cut(s) 390, 496, 758, 1043, 1237
Hpy8I GTNNAC 3 cut(s) 416, 931, 1182
Hpy99I CGWCG 2 cut(s) 181, 797
HpyAV CCTTC 4 cut(s) 96, 167, 502, 743
HpyCH4III ACNGT 3 cut(s) 235, 928, 1198
HpyCH4IV ACGT 2 cut(s) 579, 1530
HpyCH4V TGCA 8 cut(s) 454, 667, 674, 782, 899, 1058, 1154, 1445
HpyF10VI GCNNNNNNNGC 4 cut(s) 125, 134, 409, 886
HpyF3I CTNAG 5 cut(s) 285, 587, 885, 1185, 1488
HpySE526I ACGT 2 cut(s) 579, 1530
Hsp92I GRCGYC 2 cut(s) 179, 873
HspAI GCGC 3 cut(s) 238, 325, 661
Kpn2I TCCGGA 1 cut(s) 389
Ksp22I TGATCA 2 cut(s) 16, 1233
Kzo9I GATC 6 cut(s) 4, 16, 173, 520, 1233, 1379
LguI GCTCTTC 2 cut(s) 832, 1410
LmnI GCTCC 3 cut(s) 105, 134, 200
Lsp1109I GCAGC 5 cut(s) 301, 350, 420, 978, 1125
LweI GCATC 3 cut(s) 441, 661, 1045
MaeI CTAG 3 cut(s) 167, 419, 1431
MaeII ACGT 2 cut(s) 579, 1530
MaeIII GTNAC 7 cut(s) 34, 580, 813, 845, 911, 982, 1081
MalI GATC 6 cut(s) 6, 18, 175, 522, 1235, 1381
MboI GATC 6 cut(s) 4, 16, 173, 520, 1233, 1379
MboII GAAGA 7 cut(s) 312, 658, 784, 849, 1261, 1389, 1397
MflI RGATCY 2 cut(s) 4, 1379
MhlI GDGCHC 2 cut(s) 387, 1226
MlsI TGGCCA 1 cut(s) 153
MluCI AATT 1 cut(s) 503
MluNI TGGCCA 1 cut(s) 153
MlyI GAGTC 4 cut(s) 255, 565, 1097, 1184
MmeI TCCRAC 5 cut(s) 278, 465, 723, 1032, 1071
Mox20I TGGCCA 1 cut(s) 153
Mph1103I ATGCAT 1 cut(s) 1447
MroI TCCGGA 1 cut(s) 389
MscI TGGCCA 1 cut(s) 153
MseI TTAA 4 cut(s) 47, 462, 576, 1512
MslI CAYNNNNRTG 4 cut(s) 94, 528, 991, 1270
Msp20I TGGCCA 1 cut(s) 153
MspA1I CMGCKG 1 cut(s) 341
MspI CCGG 4 cut(s) 390, 843, 852, 1298
MspR9I CCNGG 1 cut(s) 1389
Mva1269I GAATGC 1 cut(s) 1445
MvaI CCWGG 1 cut(s) 1389
MvnI CGCG 2 cut(s) 325, 663
MwoI GCNNNNNNNGC 4 cut(s) 125, 134, 409, 886
NcoI CCATGG 2 cut(s) 204, 978
NdeII GATC 6 cut(s) 4, 16, 173, 520, 1233, 1379
NheI GCTAGC 1 cut(s) 1430
NlaIV GGNNCC 6 cut(s) 202, 223, 384, 385, 726, 1225
NmuCI GTSAC 3 cut(s) 34, 845, 1081
NsiI ATGCAT 1 cut(s) 1447
NspI RCATGY 2 cut(s) 945, 1445
NspV TTCGAA 1 cut(s) 1449
OliI CACNNNNGTG 1 cut(s) 1270
PagI TCATGA 1 cut(s) 757
PciSI GCTCTTC 2 cut(s) 832, 1410
PctI GAATGC 1 cut(s) 1445
PfeI GAWTC 2 cut(s) 626, 1252
PflFI GACNNNGTC 1 cut(s) 1087
PflMI CCANNNNNTGG 1 cut(s) 310
PkrI GCNGC 5 cut(s) 316, 340, 435, 968, 1140
PleI GAGTC 4 cut(s) 254, 565, 1096, 1184
PpsI GAGTC 4 cut(s) 254, 565, 1096, 1184
Psp1406I AACGTT 1 cut(s) 579
Psp6I CCWGG 1 cut(s) 1387
PspFI CCCAGC 1 cut(s) 698
PspGI CCWGG 1 cut(s) 1387
PspN4I GGNNCC 6 cut(s) 202, 223, 384, 385, 726, 1225
PspOMI GGGCCC 1 cut(s) 383
PspPI GGNCC 5 cut(s) 221, 383, 384, 392, 1275
PstI CTGCAG 1 cut(s) 1156
PsuI RGATCY 2 cut(s) 4, 1379
PsyI GACNNNGTC 1 cut(s) 1087
PvuII CAGCTG 1 cut(s) 341
RsaI GTAC 2 cut(s) 517, 1158
RsaNI GTAC 2 cut(s) 516, 1157
RseI CAYNNNNRTG 4 cut(s) 94, 528, 991, 1270
SapI GCTCTTC 2 cut(s) 832, 1410
SaqAI TTAA 4 cut(s) 47, 462, 576, 1512
SatI GCNGC 5 cut(s) 315, 339, 434, 967, 1139
Sau3AI GATC 6 cut(s) 4, 16, 173, 520, 1233, 1379
Sau96I GGNCC 5 cut(s) 221, 383, 384, 392, 1275
SchI GAGTC 4 cut(s) 255, 565, 1097, 1184
ScrFI CCNGG 1 cut(s) 1389
SduI GDGCHC 2 cut(s) 387, 1226
SfaNI GCATC 3 cut(s) 441, 661, 1045
SfcI CTRYAG 1 cut(s) 1152
SfuI TTCGAA 1 cut(s) 1449
SinI GGWCC 2 cut(s) 221, 392
SmiMI CAYNNNNRTG 4 cut(s) 94, 528, 991, 1270
SmlI CTYRAG 2 cut(s) 123, 1041
SmoI CTYRAG 2 cut(s) 123, 1041
Sse9I AATT 1 cut(s) 503
SsiI CCGC 5 cut(s) 445, 630, 909, 920, 1228
SspI AATATT 1 cut(s) 51
SspMI CTAG 3 cut(s) 167, 419, 1431
StyD4I CCNGG 1 cut(s) 1387
StyI CCWWGG 4 cut(s) 129, 204, 904, 978
TaaI ACNGT 3 cut(s) 235, 928, 1198
TaiI ACGT 2 cut(s) 582, 1533
TaqI TCGA 3 cut(s) 176, 792, 1449
TaqII GACCGA 1 cut(s) 1100
TasI AATT 1 cut(s) 503
TatI WGTACW 1 cut(s) 515
TfiI GAWTC 2 cut(s) 626, 1252
Tru1I TTAA 4 cut(s) 47, 462, 576, 1512
Tru9I TTAA 4 cut(s) 47, 462, 576, 1512
TscAI CASTG 4 cut(s) 640, 681, 1189, 1203
TseFI GTSAC 3 cut(s) 34, 845, 1081
TseI GCWGC 5 cut(s) 314, 338, 433, 966, 1138
Tsp45I GTSAC 3 cut(s) 34, 845, 1081
TspDTI ATGAA 5 cut(s) 38, 607, 774, 785, 856
TspGWI ACGGA 1 cut(s) 150
TspRI CASTG 4 cut(s) 640, 681, 1189, 1203
Tth111I GACNNNGTC 1 cut(s) 1087
Van91I CCANNNNNTGG 1 cut(s) 310
VpaK11BI GGWCC 2 cut(s) 221, 392
XceI RCATGY 2 cut(s) 945, 1445
XcmI CCANNNNNNNNNTGG 1 cut(s) 376
XspI CTAG 3 cut(s) 167, 419, 1431
Zsp2I ATGCAT 1 cut(s) 1447
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.