pycom15g03070

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
1892775 .. 1893368
594 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g03070.1

Sequence Viewer

Length: 594 bp
ATGGTGACATTAACGTGGGCAATATCATTATTGGTGAACAACCCTCACGTTCTGAAAAGAGCCCTAAACGAACTGGACACGAAAATAGGCAGACAAAGAGTTGTGAGTGAAGAAGATATAAGCAACTTGGTCTACATCCAAGCTATTGTAAAGGAGACATTACGTTTATACCCAGCAGCACCATTATCCGGGCCACGTGAATTCACTGAGGATTGCACCATTGCTGGGTACCATATTCAAAAGGGCACCCGGTTGATCATGAACCTCTGGAAGCTTCAAACAGACCCGAAAAATTGGTCCGATCCATTCGAGTTCAAGCCAGAGAGATTTCTTTCCACCCATAAGGATGTTGATGTGAGGGGTCATCATTTTGAGTTGATTCCATTTGGAAGTGGTAGAAGAGCATGCCCTGGTTTGACATTTGGCCTTCAAGTGGTGCAATTTATGTTGGCTAGTTTTCTACATGCTTTTGAAATCTCGAACCCATCTAGTGCACCAATTGATATGACGGAGAGCTTTGGGCTAACCAACATGAAGGCAACTCCACTCAAAGTTCTTATCAAACCTCGCTTGTCTTTTGAATTTTATAAATAA

Protein Analysis

198

Amino Acids

22.45

Weight (kDa)

8.89

Isoelectric Point (pI)

34.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 2 - 176 2.5e-55 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 588
Acc65I GGTACC 1 cut(s) 228
AccB1I GGYRCC 2 cut(s) 228, 245
AccI GTMKAC 1 cut(s) 132
AclWI GGATC 1 cut(s) 296
AcsI RAATTY 2 cut(s) 200, 581
AcvI CACGTG 1 cut(s) 197
AfaI GTAC 1 cut(s) 230
AfiI CCNNNNNNNGG 3 cut(s) 188, 225, 433
AgsI TTSAA 6 cut(s) 239, 278, 316, 431, 473, 581
AjnI CCWGG 1 cut(s) 409
AluBI AGCT 3 cut(s) 143, 274, 516
AluI AGCT 3 cut(s) 143, 274, 516
Alw21I GWGCWC 1 cut(s) 496
Alw26I GTCTC 1 cut(s) 149
Alw44I GTGCAC 1 cut(s) 492
AlwI GGATC 1 cut(s) 296
AoxI GGCC 2 cut(s) 191, 424
ApaLI GTGCAC 1 cut(s) 492
ApeKI GCWGC 1 cut(s) 176
ApoI RAATTY 2 cut(s) 200, 581
ArsI GACNNNNNNTTYG 2 cut(s) 281, 313
Asp718I GGTACC 1 cut(s) 228
AspS9I GGNCC 2 cut(s) 191, 297
AsuC2I CCSGG 2 cut(s) 190, 250
AsuHPI GGTGA 2 cut(s) 16, 46
AvaII GGWCC 1 cut(s) 297
BaeGI GKGCMC 2 cut(s) 248, 496
BanI GGYRCC 2 cut(s) 228, 245
BanII GRGCYC 1 cut(s) 64
BbrPI CACGTG 1 cut(s) 197
Bbv12I GWGCWC 1 cut(s) 496
BbvI GCAGC 1 cut(s) 188
BccI CCATC 1 cut(s) 493
BciT130I CCWGG 1 cut(s) 411
BclI TGATCA 1 cut(s) 255
BcnI CCSGG 2 cut(s) 190, 250
BcoDI GTCTC 1 cut(s) 149
BfaI CTAG 2 cut(s) 453, 489
BisI GCNGC 1 cut(s) 177
BlsI GCNGC 1 cut(s) 178
Bme1390I CCNGG 3 cut(s) 190, 250, 411
Bme18I GGWCC 1 cut(s) 297
BmgT120I GGNCC 2 cut(s) 191, 297
BmiI GGNNCC 2 cut(s) 230, 247
BmrFI CCNGG 3 cut(s) 190, 250, 411
BpuMI CCSGG 2 cut(s) 190, 250
BsaAI YACGTR 1 cut(s) 197
BsaJI CCNNGG 1 cut(s) 409
Bsc4I CCNNNNNNNGG 3 cut(s) 188, 225, 433
Bse1I ACTGG 1 cut(s) 78
Bse3DI GCAATG 1 cut(s) 219
BseBI CCWGG 1 cut(s) 411
BseDI CCNNGG 1 cut(s) 409
BseGI GGATG 2 cut(s) 135, 352
BseLI CCNNNNNNNGG 3 cut(s) 188, 225, 433
BseMI GCAATG 1 cut(s) 219
BseMII CTCAG 1 cut(s) 198
BseNI ACTGG 1 cut(s) 78
BseSI GKGCMC 2 cut(s) 248, 496
BseXI GCAGC 1 cut(s) 188
BseYI CCCAGC 2 cut(s) 172, 224
BshFI GGCC 2 cut(s) 193, 426
BshNI GGYRCC 2 cut(s) 228, 245
BsiHKAI GWGCWC 1 cut(s) 496
BsiSI CCGG 2 cut(s) 189, 250
BslI CCNNNNNNNGG 3 cut(s) 188, 225, 433
BsmAI GTCTC 1 cut(s) 149
BsnI GGCC 2 cut(s) 193, 426
Bsp1286I GDGCHC 3 cut(s) 64, 248, 496
Bsp143I GATC 2 cut(s) 255, 301
BspANI GGCC 2 cut(s) 193, 426
BspCNI CTCAG 1 cut(s) 199
BspHI TCATGA 1 cut(s) 258
BspLI GGNNCC 2 cut(s) 230, 247
BspPI GGATC 1 cut(s) 296
BspQI GCTCTTC 1 cut(s) 394
BspT107I GGYRCC 2 cut(s) 228, 245
BsrDI GCAATG 1 cut(s) 219
BsrI ACTGG 1 cut(s) 78
BssECI CCNNGG 1 cut(s) 409
BssMI GATC 2 cut(s) 255, 301
Bst2UI CCWGG 1 cut(s) 411
Bst6I CTCTTC 1 cut(s) 394
BstBAI YACGTR 1 cut(s) 197
BstC8I GCNNGC 1 cut(s) 406
BstDEI CTNAG 1 cut(s) 207
BstF5I GGATG 2 cut(s) 135, 352
BstKTI GATC 2 cut(s) 258, 304
BstMAI GTCTC 1 cut(s) 149
BstMBI GATC 2 cut(s) 255, 301
BstNI CCWGG 1 cut(s) 411
BstNSI RCATGY 2 cut(s) 408, 467
BstSCI CCNGG 3 cut(s) 188, 248, 409
BstSLI GKGCMC 2 cut(s) 248, 496
BstV1I GCAGC 1 cut(s) 188
BsuRI GGCC 2 cut(s) 193, 426
BtsCI GGATG 2 cut(s) 135, 352
BtsIMutI CAGTG 1 cut(s) 204
Cac8I GCNNGC 1 cut(s) 406
CciI TCATGA 1 cut(s) 258
Cfr13I GGNCC 2 cut(s) 191, 297
Csp6I GTAC 1 cut(s) 229
CviAII CATG 4 cut(s) 259, 405, 464, 532
CviJI RGCY 9 cut(s) 62, 143, 193, 274, 319, 426, 452, 516, 523
CviKI_1 RGCY 9 cut(s) 62, 143, 193, 274, 319, 426, 452, 516, 523
CviQI GTAC 1 cut(s) 229
DdeI CTNAG 1 cut(s) 207
DpnI GATC 2 cut(s) 257, 303
DpnII GATC 2 cut(s) 255, 301
Eam1104I CTCTTC 1 cut(s) 394
EarI CTCTTC 1 cut(s) 394
Eco24I GRGCYC 1 cut(s) 64
Eco47I GGWCC 1 cut(s) 297
Eco72I CACGTG 1 cut(s) 197
EcoRI GAATTC 1 cut(s) 200
EcoRII CCWGG 1 cut(s) 409
EcoT38I GRGCYC 1 cut(s) 64
FaeI CATG 4 cut(s) 262, 408, 467, 535
FatI CATG 4 cut(s) 258, 404, 463, 531
FbaI TGATCA 1 cut(s) 255
FblI GTMKAC 1 cut(s) 132
Fnu4HI GCNGC 1 cut(s) 177
FokI GGATG 2 cut(s) 122, 359
FriOI GRGCYC 1 cut(s) 64
Fsp4HI GCNGC 1 cut(s) 177
FspBI CTAG 2 cut(s) 453, 489
GluI GCNGC 1 cut(s) 177
GsaI CCCAGC 2 cut(s) 176, 228
HaeIII GGCC 2 cut(s) 193, 426
HapII CCGG 2 cut(s) 189, 250
Hin1II CATG 4 cut(s) 262, 408, 467, 535
HindIII AAGCTT 1 cut(s) 272
HinfI GANTC 1 cut(s) 379
HpaII CCGG 2 cut(s) 189, 250
HphI GGTGA 2 cut(s) 16, 46
Hpy166II GTNNAC 3 cut(s) 37, 133, 494
Hpy188I TCNGA 2 cut(s) 54, 301
Hpy188III TCNNGA 3 cut(s) 259, 268, 478
Hpy8I GTNNAC 3 cut(s) 37, 133, 494
HpyAV CCTTC 2 cut(s) 437, 529
HpyCH4IV ACGT 4 cut(s) 14, 48, 163, 196
HpyCH4V TGCA 3 cut(s) 216, 439, 494
HpyF3I CTNAG 1 cut(s) 207
HpySE526I ACGT 4 cut(s) 14, 48, 163, 196
Hsp92II CATG 4 cut(s) 262, 408, 467, 535
KpnI GGTACC 1 cut(s) 232
Ksp22I TGATCA 1 cut(s) 255
Kzo9I GATC 2 cut(s) 255, 301
LguI GCTCTTC 1 cut(s) 394
LpnPI CCDG 9 cut(s) 59, 186, 202, 210, 253, 263, 333, 396, 423
Lsp1109I GCAGC 1 cut(s) 188
MaeI CTAG 2 cut(s) 453, 489
MaeII ACGT 4 cut(s) 14, 48, 163, 196
MaeIII GTNAC 1 cut(s) 4
MalI GATC 2 cut(s) 257, 303
MboI GATC 2 cut(s) 255, 301
MboII GAAGA 3 cut(s) 122, 125, 411
MfeI CAATTG 1 cut(s) 498
MhlI GDGCHC 3 cut(s) 64, 248, 496
MluCI AATT 5 cut(s) 200, 292, 440, 498, 581
MnlI CCTC 5 cut(s) 54, 202, 275, 351, 576
MseI TTAA 1 cut(s) 11
MslI CAYNNNNRTG 2 cut(s) 13, 345
MspI CCGG 2 cut(s) 189, 250
MspR9I CCNGG 3 cut(s) 190, 250, 411
MunI CAATTG 1 cut(s) 498
MvaI CCWGG 1 cut(s) 411
NciI CCSGG 2 cut(s) 190, 250
NdeII GATC 2 cut(s) 255, 301
NlaIII CATG 4 cut(s) 262, 408, 467, 535
NlaIV GGNNCC 2 cut(s) 230, 247
NmuCI GTSAC 1 cut(s) 4
NspI RCATGY 2 cut(s) 408, 467
PaeI GCATGC 1 cut(s) 408
PagI TCATGA 1 cut(s) 258
PciSI GCTCTTC 1 cut(s) 394
PfeI GAWTC 1 cut(s) 379
PkrI GCNGC 1 cut(s) 178
PmaCI CACGTG 1 cut(s) 197
PmlI CACGTG 1 cut(s) 197
Ppu21I YACGTR 1 cut(s) 197
PsiI TTATAA 1 cut(s) 588
Psp6I CCWGG 1 cut(s) 409
PspCI CACGTG 1 cut(s) 197
PspFI CCCAGC 2 cut(s) 172, 224
PspGI CCWGG 1 cut(s) 409
PspN4I GGNNCC 2 cut(s) 230, 247
PspPI GGNCC 2 cut(s) 191, 297
RsaI GTAC 1 cut(s) 230
RsaNI GTAC 1 cut(s) 229
RseI CAYNNNNRTG 2 cut(s) 13, 345
SapI GCTCTTC 1 cut(s) 394
SaqAI TTAA 1 cut(s) 11
SatI GCNGC 1 cut(s) 177
Sau3AI GATC 2 cut(s) 255, 301
Sau96I GGNCC 2 cut(s) 191, 297
ScrFI CCNGG 3 cut(s) 190, 250, 411
SduI GDGCHC 3 cut(s) 64, 248, 496
SetI ASST 9 cut(s) 17, 51, 145, 166, 199, 267, 276, 518, 568
SinI GGWCC 1 cut(s) 297
SmiMI CAYNNNNRTG 2 cut(s) 13, 345
SphI GCATGC 1 cut(s) 408
Sse9I AATT 5 cut(s) 200, 292, 440, 498, 581
SspMI CTAG 2 cut(s) 453, 489
StyD4I CCNGG 3 cut(s) 188, 248, 409
TaiI ACGT 4 cut(s) 17, 51, 166, 199
TaqI TCGA 2 cut(s) 309, 479
TasI AATT 5 cut(s) 200, 292, 440, 498, 581
TfiI GAWTC 1 cut(s) 379
Tru1I TTAA 1 cut(s) 11
Tru9I TTAA 1 cut(s) 11
TscAI CASTG 1 cut(s) 211
TseFI GTSAC 1 cut(s) 4
TseI GCWGC 1 cut(s) 176
Tsp45I GTSAC 1 cut(s) 4
TspDTI ATGAA 2 cut(s) 275, 548
TspGWI ACGGA 1 cut(s) 524
TspRI CASTG 1 cut(s) 211
VneI GTGCAC 1 cut(s) 492
VpaK11BI GGWCC 1 cut(s) 297
XapI RAATTY 2 cut(s) 200, 581
XceI RCATGY 2 cut(s) 408, 467
XmiI GTMKAC 1 cut(s) 132
XspI CTAG 2 cut(s) 453, 489
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.