Cytochrome p450
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| TIR | PF01582 | 21 - 182 | 9e-48 | TIR domain |
| TIR_2 | PF13676 | 23 - 119 | 5.6e-14 | TIR domain |
| NB-ARC | PF00931 | 204 - 366 | 5.3e-31 | NB-ARC domain |
| LRR_8 | PF13855 | 562 - 618 | 1.2e-06 | Leucine rich repeat |
| LRR_14 | PF23598 | 625 - 775 | 1.5e-10 | Leucine-rich repeat region |
| LRR_RPS2 | PF23247 | 844 - 986 | 2.2e-20 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_RPS2 | PF23247 | 926 - 1023 | 5.6e-12 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 504, 902, 2283 |
| AarI | CACCTGC | 1 cut(s) | 2845 |
| Acc36I | ACCTGC | 3 cut(s) | 183, 1191, 2845 |
| AccI | GTMKAC | 2 cut(s) | 1135, 2556 |
| AciI | CCGC | 3 cut(s) | 1131, 1631, 1657 |
| AclWI | GGATC | 5 cut(s) | 436, 830, 1903, 2180, 2825 |
| AcoI | YGGCCR | 1 cut(s) | 1601 |
| AcsI | RAATTY | 5 cut(s) | 327, 475, 792, 1462, 1940 |
| AcuI | CTGAAG | 1 cut(s) | 1359 |
| AdeI | CACNNNGTG | 1 cut(s) | 848 |
| AfaI | GTAC | 4 cut(s) | 558, 2057, 2685, 3065 |
| AfeI | AGCGCT | 1 cut(s) | 636 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 1974, 2221, 2965 |
| AflII | CTTAAG | 1 cut(s) | 1457 |
| AflIII | ACRYGT | 1 cut(s) | 709 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2003 |
| AjiI | CACGTC | 1 cut(s) | 1607 |
| AjnI | CCWGG | 1 cut(s) | 1692 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1917, 1949, 2721, 2753 |
| Alw26I | GTCTC | 9 cut(s) | 658, 1639, 2252, 2272, 2604, 2615, 3043, 3216, 3228 |
| AlwI | GGATC | 5 cut(s) | 436, 830, 1903, 2180, 2825 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 26, 188, 2923 |
| Aor51HI | AGCGCT | 1 cut(s) | 636 |
| AoxI | GGCC | 3 cut(s) | 3, 1601, 1740 |
| ApeKI | GCWGC | 3 cut(s) | 1202, 1584, 2880 |
| ApoI | RAATTY | 5 cut(s) | 327, 475, 792, 1462, 1940 |
| AspLEI | GCGC | 1 cut(s) | 637 |
| AspS9I | GGNCC | 2 cut(s) | 1080, 2825 |
| AsuC2I | CCSGG | 1 cut(s) | 484 |
| AsuHPI | GGTGA | 4 cut(s) | 391, 728, 1039, 2594 |
| AsuII | TTCGAA | 1 cut(s) | 387 |
| AvaII | GGWCC | 2 cut(s) | 1080, 2825 |
| BalI | TGGCCA | 1 cut(s) | 1603 |
| BbsI | GAAGAC | 6 cut(s) | 1347, 1368, 1814, 2541, 2943, 3017 |
| BbvI | GCAGC | 3 cut(s) | 1214, 1571, 2892 |
| BccI | CCATC | 5 cut(s) | 1550, 2023, 2321, 2671, 2714 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2531, 2565 |
| BciT130I | CCWGG | 1 cut(s) | 1694 |
| BciVI | GTATCC | 3 cut(s) | 999, 1519, 2201 |
| BclI | TGATCA | 1 cut(s) | 718 |
| BcnI | CCSGG | 1 cut(s) | 484 |
| BcoDI | GTCTC | 9 cut(s) | 658, 1639, 2252, 2272, 2604, 2615, 3043, 3216, 3228 |
| BfaI | CTAG | 7 cut(s) | 861, 1119, 1425, 1826, 2045, 2139, 2369 |
| BfmI | CTRYAG | 3 cut(s) | 131, 1551, 1585 |
| BfoI | RGCGCY | 1 cut(s) | 638 |
| BfrI | CTTAAG | 1 cut(s) | 1457 |
| BfuAI | ACCTGC | 3 cut(s) | 183, 1191, 2845 |
| BfuI | GTATCC | 3 cut(s) | 999, 1519, 2201 |
| BisI | GCNGC | 3 cut(s) | 1203, 1585, 2881 |
| BlsI | GCNGC | 3 cut(s) | 1204, 1586, 2882 |
| Bme1390I | CCNGG | 2 cut(s) | 484, 1694 |
| Bme18I | GGWCC | 2 cut(s) | 1080, 2825 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2003 |
| BmgBI | CACGTC | 1 cut(s) | 1607 |
| BmgT120I | GGNCC | 2 cut(s) | 1080, 2825 |
| BmiI | GGNNCC | 1 cut(s) | 2505 |
| BmrFI | CCNGG | 2 cut(s) | 484, 1694 |
| BmrI | ACTGGG | 3 cut(s) | 2089, 2653, 3127 |
| BmuI | ACTGGG | 3 cut(s) | 2089, 2653, 3127 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2264 |
| BpiI | GAAGAC | 6 cut(s) | 1347, 1368, 1814, 2541, 2943, 3017 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2615, 2647 |
| BpmI | CTGGAG | 1 cut(s) | 1676 |
| Bpu14I | TTCGAA | 1 cut(s) | 387 |
| BpuEI | CTTGAG | 3 cut(s) | 1925, 2597, 2642 |
| BpuMI | CCSGG | 1 cut(s) | 484 |
| Bsa29I | ATCGAT | 1 cut(s) | 825 |
| BsaI | GGTCTC | 4 cut(s) | 658, 1639, 2272, 2604 |
| BsaJI | CCNNGG | 3 cut(s) | 615, 699, 1026 |
| BsaWI | WCCGGW | 1 cut(s) | 2326 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 3212, 3242 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 1974, 2221, 2965 |
| Bse1I | ACTGG | 7 cut(s) | 563, 1996, 2084, 2648, 3108, 3133, 3184 |
| Bse3DI | GCAATG | 2 cut(s) | 2069, 2847 |
| BseBI | CCWGG | 1 cut(s) | 1694 |
| BseCI | ATCGAT | 1 cut(s) | 825 |
| BseDI | CCNNGG | 3 cut(s) | 615, 699, 1026 |
| BseGI | GGATG | 6 cut(s) | 916, 1256, 1350, 1512, 1983, 2747 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 1974, 2221, 2965 |
| BseMI | GCAATG | 2 cut(s) | 2069, 2847 |
| BseMII | CTCAG | 3 cut(s) | 1964, 2560, 2930 |
| BseNI | ACTGG | 7 cut(s) | 563, 1996, 2084, 2648, 3108, 3133, 3184 |
| BseRI | GAGGAG | 4 cut(s) | 2115, 2118, 2121, 2806 |
| BseXI | GCAGC | 3 cut(s) | 1214, 1571, 2892 |
| BseYI | CCCAGC | 2 cut(s) | 817, 953 |
| BsgI | GTGCAG | 2 cut(s) | 461, 568 |
| BshFI | GGCC | 3 cut(s) | 5, 1603, 1742 |
| BshVI | ATCGAT | 1 cut(s) | 825 |
| BsiSI | CCGG | 3 cut(s) | 483, 2327, 2759 |
| BslFI | GGGAC | 2 cut(s) | 754, 2090 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 1974, 2221, 2965 |
| BsmAI | GTCTC | 9 cut(s) | 658, 1639, 2252, 2272, 2604, 2615, 3043, 3216, 3228 |
| BsmBI | CGTCTC | 1 cut(s) | 2252 |
| BsmFI | GGGAC | 2 cut(s) | 754, 2090 |
| BsmI | GAATGC | 2 cut(s) | 1101, 3113 |
| BsnI | GGCC | 3 cut(s) | 5, 1603, 1742 |
| Bso31I | GGTCTC | 4 cut(s) | 658, 1639, 2272, 2604 |
| Bsp119I | TTCGAA | 1 cut(s) | 387 |
| Bsp1407I | TGTACA | 2 cut(s) | 2055, 3063 |
| Bsp143I | GATC | 9 cut(s) | 124, 428, 718, 822, 1044, 1863, 1908, 2172, 2830 |
| Bsp19I | CCATGG | 3 cut(s) | 615, 699, 1026 |
| BspACI | CCGC | 3 cut(s) | 1131, 1631, 1657 |
| BspANI | GGCC | 3 cut(s) | 5, 1603, 1742 |
| BspCNI | CTCAG | 3 cut(s) | 1965, 2559, 2929 |
| BspDI | ATCGAT | 1 cut(s) | 825 |
| BspHI | TCATGA | 1 cut(s) | 2562 |
| BspLI | GGNNCC | 1 cut(s) | 2505 |
| BspMAI | CTGCAG | 2 cut(s) | 135, 1589 |
| BspMI | ACCTGC | 3 cut(s) | 183, 1191, 2845 |
| BspPI | GGATC | 5 cut(s) | 436, 830, 1903, 2180, 2825 |
| BspQI | GCTCTTC | 1 cut(s) | 847 |
| BspT104I | TTCGAA | 1 cut(s) | 387 |
| BspTI | CTTAAG | 1 cut(s) | 1457 |
| BspTNI | GGTCTC | 4 cut(s) | 658, 1639, 2272, 2604 |
| BsrDI | GCAATG | 2 cut(s) | 2069, 2847 |
| BsrGI | TGTACA | 2 cut(s) | 2055, 3063 |
| BsrI | ACTGG | 7 cut(s) | 563, 1996, 2084, 2648, 3108, 3133, 3184 |
| BssECI | CCNNGG | 3 cut(s) | 615, 699, 1026 |
| BssMI | GATC | 9 cut(s) | 124, 428, 718, 822, 1044, 1863, 1908, 2172, 2830 |
| BssT1I | CCWWGG | 3 cut(s) | 615, 699, 1026 |
| Bst2UI | CCWGG | 1 cut(s) | 1694 |
| Bst4CI | ACNGT | 7 cut(s) | 661, 1548, 2055, 2263, 3016, 3068, 3170 |
| Bst6I | CTCTTC | 4 cut(s) | 847, 1062, 1665, 2242 |
| BstAFI | CTTAAG | 1 cut(s) | 1457 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1311, 1791 |
| BstAUI | TGTACA | 2 cut(s) | 2055, 3063 |
| BstBI | TTCGAA | 1 cut(s) | 387 |
| BstC8I | GCNNGC | 6 cut(s) | 180, 727, 1472, 1582, 2122, 2144 |
| BstDEI | CTNAG | 7 cut(s) | 1766, 1781, 1913, 1973, 2546, 2916, 3037 |
| BstDSI | CCRYGG | 3 cut(s) | 615, 699, 1026 |
| BstF5I | GGATG | 6 cut(s) | 916, 1256, 1350, 1512, 1983, 2747 |
| BstH2I | RGCGCY | 1 cut(s) | 638 |
| BstHHI | GCGC | 1 cut(s) | 637 |
| BstKTI | GATC | 9 cut(s) | 127, 431, 721, 825, 1047, 1866, 1911, 2175, 2833 |
| BstMAI | GTCTC | 9 cut(s) | 658, 1639, 2252, 2272, 2604, 2615, 3043, 3216, 3228 |
| BstMBI | GATC | 9 cut(s) | 124, 428, 718, 822, 1044, 1863, 1908, 2172, 2830 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 470, 599, 1151, 1311, 1791 |
| BstNI | CCWGG | 1 cut(s) | 1694 |
| BstNSI | RCATGY | 2 cut(s) | 713, 2062 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2264 |
| BstSCI | CCNGG | 2 cut(s) | 482, 1692 |
| BstSFI | CTRYAG | 3 cut(s) | 131, 1551, 1585 |
| BstV1I | GCAGC | 3 cut(s) | 1214, 1571, 2892 |
| BstV2I | GAAGAC | 6 cut(s) | 1347, 1368, 1814, 2541, 2943, 3017 |
| BstX2I | RGATCY | 2 cut(s) | 1908, 2172 |
| BstYI | RGATCY | 2 cut(s) | 1908, 2172 |
| Bsu15I | ATCGAT | 1 cut(s) | 825 |
| BsuI | GTATCC | 3 cut(s) | 999, 1519, 2201 |
| BsuRI | GGCC | 3 cut(s) | 5, 1603, 1742 |
| BsuTUI | ATCGAT | 1 cut(s) | 825 |
| BtgI | CCRYGG | 3 cut(s) | 615, 699, 1026 |
| BtgZI | GCGATG | 2 cut(s) | 15, 2478 |
| BtrI | CACGTC | 1 cut(s) | 1607 |
| BtsCI | GGATG | 6 cut(s) | 916, 1256, 1350, 1512, 1983, 2747 |
| BtsIMutI | CAGTG | 3 cut(s) | 1544, 2924, 3073 |
| BveI | ACCTGC | 3 cut(s) | 183, 1191, 2845 |
| Cac8I | GCNNGC | 6 cut(s) | 180, 727, 1472, 1582, 2122, 2144 |
| CaiI | CAGNNNCTG | 3 cut(s) | 26, 188, 2923 |
| CciI | TCATGA | 1 cut(s) | 2562 |
| CfoI | GCGC | 1 cut(s) | 637 |
| Cfr13I | GGNCC | 2 cut(s) | 1080, 2825 |
| ClaI | ATCGAT | 1 cut(s) | 825 |
| CseI | GACGC | 1 cut(s) | 2820 |
| Csp6I | GTAC | 4 cut(s) | 557, 2056, 2684, 3064 |
| CviQI | GTAC | 4 cut(s) | 557, 2056, 2684, 3064 |
| DdeI | CTNAG | 7 cut(s) | 1766, 1781, 1913, 1973, 2546, 2916, 3037 |
| DpnI | GATC | 9 cut(s) | 126, 430, 720, 824, 1046, 1865, 1910, 2174, 2832 |
| DpnII | GATC | 9 cut(s) | 124, 428, 718, 822, 1044, 1863, 1908, 2172, 2830 |
| DraIII | CACNNNGTG | 1 cut(s) | 848 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2003 |
| EaeI | YGGCCR | 1 cut(s) | 1601 |
| Eam1104I | CTCTTC | 4 cut(s) | 847, 1062, 1665, 2242 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2003 |
| EarI | CTCTTC | 4 cut(s) | 847, 1062, 1665, 2242 |
| Eco130I | CCWWGG | 3 cut(s) | 615, 699, 1026 |
| Eco147I | AGGCCT | 1 cut(s) | 1742 |
| Eco31I | GGTCTC | 4 cut(s) | 658, 1639, 2272, 2604 |
| Eco32I | GATATC | 1 cut(s) | 371 |
| Eco47I | GGWCC | 2 cut(s) | 1080, 2825 |
| Eco47III | AGCGCT | 1 cut(s) | 636 |
| Eco57I | CTGAAG | 1 cut(s) | 1359 |
| EcoRI | GAATTC | 2 cut(s) | 327, 1462 |
| EcoRII | CCWGG | 1 cut(s) | 1692 |
| EcoRV | GATATC | 1 cut(s) | 371 |
| EcoT14I | CCWWGG | 3 cut(s) | 615, 699, 1026 |
| EcoT22I | ATGCAT | 3 cut(s) | 311, 1258, 1512 |
| ErhI | CCWWGG | 3 cut(s) | 615, 699, 1026 |
| Esp3I | CGTCTC | 1 cut(s) | 2252 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1298, 1330 |
| FaqI | GGGAC | 2 cut(s) | 754, 2090 |
| FauNDI | CATATG | 2 cut(s) | 1440, 2816 |
| FbaI | TGATCA | 1 cut(s) | 718 |
| FblI | GTMKAC | 2 cut(s) | 1135, 2556 |
| Fnu4HI | GCNGC | 3 cut(s) | 1203, 1585, 2881 |
| FokI | GGATG | 6 cut(s) | 923, 1243, 1337, 1519, 1990, 2754 |
| Fsp4HI | GCNGC | 3 cut(s) | 1203, 1585, 2881 |
| FspBI | CTAG | 7 cut(s) | 861, 1119, 1425, 1826, 2045, 2139, 2369 |
| GlaI | GCGC | 1 cut(s) | 636 |
| GluI | GCNGC | 3 cut(s) | 1203, 1585, 2881 |
| GsaI | CCCAGC | 2 cut(s) | 821, 957 |
| GsuI | CTGGAG | 1 cut(s) | 1676 |
| HaeII | RGCGCY | 1 cut(s) | 638 |
| HaeIII | GGCC | 3 cut(s) | 5, 1603, 1742 |
| HapII | CCGG | 3 cut(s) | 483, 2327, 2759 |
| HgaI | GACGC | 1 cut(s) | 2820 |
| HhaI | GCGC | 1 cut(s) | 637 |
| Hin6I | GCGC | 1 cut(s) | 635 |
| HinP1I | GCGC | 1 cut(s) | 635 |
| HincII | GTYRAC | 2 cut(s) | 2136, 2629 |
| HindII | GTYRAC | 2 cut(s) | 2136, 2629 |
| HindIII | AAGCTT | 2 cut(s) | 393, 1468 |
| HinfI | GANTC | 7 cut(s) | 224, 570, 949, 1073, 1925, 2630, 2851 |
| HpaII | CCGG | 3 cut(s) | 483, 2327, 2759 |
| HphI | GGTGA | 4 cut(s) | 391, 728, 1039, 2594 |
| Hpy166II | GTNNAC | 6 cut(s) | 538, 1136, 1997, 2136, 2557, 2629 |
| Hpy188I | TCNGA | 7 cut(s) | 99, 375, 433, 1066, 1974, 2508, 3160 |
| Hpy188III | TCNNGA | 9 cut(s) | 861, 1337, 1384, 1400, 1523, 2563, 2693, 2828, 2848 |
| Hpy8I | GTNNAC | 6 cut(s) | 538, 1136, 1997, 2136, 2557, 2629 |
| HpyAV | CCTTC | 9 cut(s) | 48, 94, 430, 1105, 1613, 1753, 2158, 2741, 3115 |
| HpyCH4III | ACNGT | 7 cut(s) | 661, 1548, 2055, 2263, 3016, 3068, 3170 |
| HpyCH4IV | ACGT | 1 cut(s) | 1606 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 470, 599, 1151, 1311, 1791 |
| HpyF3I | CTNAG | 7 cut(s) | 1766, 1781, 1913, 1973, 2546, 2916, 3037 |
| HpySE526I | ACGT | 1 cut(s) | 1606 |
| HspAI | GCGC | 1 cut(s) | 635 |
| Ksp22I | TGATCA | 1 cut(s) | 718 |
| Kzo9I | GATC | 9 cut(s) | 124, 428, 718, 822, 1044, 1863, 1908, 2172, 2830 |
| LguI | GCTCTTC | 1 cut(s) | 847 |
| LmnI | GCTCC | 2 cut(s) | 17, 3134 |
| Lsp1109I | GCAGC | 3 cut(s) | 1214, 1571, 2892 |
| MaeI | CTAG | 7 cut(s) | 861, 1119, 1425, 1826, 2045, 2139, 2369 |
| MaeII | ACGT | 1 cut(s) | 1606 |
| MaeIII | GTNAC | 4 cut(s) | 840, 1447, 2005, 2616 |
| MalI | GATC | 9 cut(s) | 126, 430, 720, 824, 1046, 1865, 1910, 2174, 2832 |
| MboI | GATC | 9 cut(s) | 124, 428, 718, 822, 1044, 1863, 1908, 2172, 2830 |
| MfeI | CAATTG | 5 cut(s) | 216, 237, 1140, 1413, 2930 |
| MflI | RGATCY | 2 cut(s) | 1908, 2172 |
| MlsI | TGGCCA | 1 cut(s) | 1603 |
| MluNI | TGGCCA | 1 cut(s) | 1603 |
| MlyI | GAGTC | 2 cut(s) | 2624, 2845 |
| MmeI | TCCRAC | 2 cut(s) | 547, 1962 |
| Mox20I | TGGCCA | 1 cut(s) | 1603 |
| Mph1103I | ATGCAT | 3 cut(s) | 311, 1258, 1512 |
| MscI | TGGCCA | 1 cut(s) | 1603 |
| MseI | TTAA | 8 cut(s) | 150, 1053, 1274, 1458, 1775, 1964, 2153, 2856 |
| MslI | CAYNNNNRTG | 4 cut(s) | 714, 1261, 1851, 1880 |
| Msp20I | TGGCCA | 1 cut(s) | 1603 |
| MspCI | CTTAAG | 1 cut(s) | 1457 |
| MspI | CCGG | 3 cut(s) | 483, 2327, 2759 |
| MspR9I | CCNGG | 2 cut(s) | 484, 1694 |
| MunI | CAATTG | 5 cut(s) | 216, 237, 1140, 1413, 2930 |
| Mva1269I | GAATGC | 2 cut(s) | 1101, 3113 |
| MvaI | CCWGG | 1 cut(s) | 1694 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 470, 599, 1151, 1311, 1791 |
| NciI | CCSGG | 1 cut(s) | 484 |
| NcoI | CCATGG | 3 cut(s) | 615, 699, 1026 |
| NdeI | CATATG | 2 cut(s) | 1440, 2816 |
| NdeII | GATC | 9 cut(s) | 124, 428, 718, 822, 1044, 1863, 1908, 2172, 2830 |
| NlaIV | GGNNCC | 1 cut(s) | 2505 |
| NmuCI | GTSAC | 3 cut(s) | 840, 1447, 2005 |
| NsiI | ATGCAT | 3 cut(s) | 311, 1258, 1512 |
| NspI | RCATGY | 2 cut(s) | 713, 2062 |
| NspV | TTCGAA | 1 cut(s) | 387 |
| PagI | TCATGA | 1 cut(s) | 2562 |
| PaqCI | CACCTGC | 1 cut(s) | 2845 |
| PceI | AGGCCT | 1 cut(s) | 1742 |
| PciI | ACATGT | 1 cut(s) | 709 |
| PciSI | GCTCTTC | 1 cut(s) | 847 |
| PctI | GAATGC | 2 cut(s) | 1101, 3113 |
| PfeI | GAWTC | 5 cut(s) | 224, 570, 949, 1073, 1925 |
| PkrI | GCNGC | 3 cut(s) | 1204, 1586, 2882 |
| PleI | GAGTC | 2 cut(s) | 2624, 2845 |
| PpsI | GAGTC | 2 cut(s) | 2624, 2845 |
| PscI | ACATGT | 1 cut(s) | 709 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2264 |
| PsiI | TTATAA | 3 cut(s) | 504, 902, 2283 |
| Psp6I | CCWGG | 1 cut(s) | 1692 |
| PspFI | CCCAGC | 2 cut(s) | 817, 953 |
| PspGI | CCWGG | 1 cut(s) | 1692 |
| PspN4I | GGNNCC | 1 cut(s) | 2505 |
| PspPI | GGNCC | 2 cut(s) | 1080, 2825 |
| PstI | CTGCAG | 2 cut(s) | 135, 1589 |
| PstNI | CAGNNNCTG | 3 cut(s) | 26, 188, 2923 |
| PsuI | RGATCY | 2 cut(s) | 1908, 2172 |
| RsaI | GTAC | 4 cut(s) | 558, 2057, 2685, 3065 |
| RsaNI | GTAC | 4 cut(s) | 557, 2056, 2684, 3064 |
| RseI | CAYNNNNRTG | 4 cut(s) | 714, 1261, 1851, 1880 |
| SapI | GCTCTTC | 1 cut(s) | 847 |
| SaqAI | TTAA | 8 cut(s) | 150, 1053, 1274, 1458, 1775, 1964, 2153, 2856 |
| SatI | GCNGC | 3 cut(s) | 1203, 1585, 2881 |
| Sau3AI | GATC | 9 cut(s) | 124, 428, 718, 822, 1044, 1863, 1908, 2172, 2830 |
| Sau96I | GGNCC | 2 cut(s) | 1080, 2825 |
| SchI | GAGTC | 2 cut(s) | 2624, 2845 |
| ScrFI | CCNGG | 2 cut(s) | 484, 1694 |
| SfcI | CTRYAG | 3 cut(s) | 131, 1551, 1585 |
| SfuI | TTCGAA | 1 cut(s) | 387 |
| SinI | GGWCC | 2 cut(s) | 1080, 2825 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 714, 1261, 1851, 1880 |
| SmlI | CTYRAG | 5 cut(s) | 7, 1457, 1904, 2612, 2621 |
| SmoI | CTYRAG | 5 cut(s) | 7, 1457, 1904, 2612, 2621 |
| SseBI | AGGCCT | 1 cut(s) | 1742 |
| SsiI | CCGC | 3 cut(s) | 1131, 1631, 1657 |
| SspI | AATATT | 1 cut(s) | 2276 |
| SspMI | CTAG | 7 cut(s) | 861, 1119, 1425, 1826, 2045, 2139, 2369 |
| StuI | AGGCCT | 1 cut(s) | 1742 |
| StyD4I | CCNGG | 2 cut(s) | 482, 1692 |
| StyI | CCWWGG | 3 cut(s) | 615, 699, 1026 |
| TaaI | ACNGT | 7 cut(s) | 661, 1548, 2055, 2263, 3016, 3068, 3170 |
| TaiI | ACGT | 1 cut(s) | 1609 |
| TaqI | TCGA | 6 cut(s) | 351, 367, 387, 825, 1399, 2551 |
| TatI | WGTACW | 3 cut(s) | 556, 2055, 3063 |
| TfiI | GAWTC | 5 cut(s) | 224, 570, 949, 1073, 1925 |
| Tru1I | TTAA | 8 cut(s) | 150, 1053, 1274, 1458, 1775, 1964, 2153, 2856 |
| Tru9I | TTAA | 8 cut(s) | 150, 1053, 1274, 1458, 1775, 1964, 2153, 2856 |
| TscAI | CASTG | 3 cut(s) | 1551, 2924, 3073 |
| TseFI | GTSAC | 3 cut(s) | 840, 1447, 2005 |
| TseI | GCWGC | 3 cut(s) | 1202, 1584, 2880 |
| Tsp45I | GTSAC | 3 cut(s) | 840, 1447, 2005 |
| TspGWI | ACGGA | 2 cut(s) | 441, 803 |
| TspRI | CASTG | 3 cut(s) | 1551, 2924, 3073 |
| Vha464I | CTTAAG | 1 cut(s) | 1457 |
| VpaK11BI | GGWCC | 2 cut(s) | 1080, 2825 |
| XapI | RAATTY | 5 cut(s) | 327, 475, 792, 1462, 1940 |
| XbaI | TCTAGA | 1 cut(s) | 860 |
| XceI | RCATGY | 2 cut(s) | 713, 2062 |
| XmiI | GTMKAC | 2 cut(s) | 1135, 2556 |
| XspI | CTAG | 7 cut(s) | 861, 1119, 1425, 1826, 2045, 2139, 2369 |
| Zsp2I | ATGCAT | 3 cut(s) | 311, 1258, 1512 |