pycom15g03060

cytochrome P450

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
1888930 .. 1889517
588 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g03060.1

Sequence Viewer

Length: 537 bp
ATGCATGACAGGGCGCTAATAACACAAAAAGTTGCAATAATGGATTCTCTCCCTTATGCAAACTCTATCACTGCTGGATTATTCACAATAATCATCGTGTATTACTTATCACGAAGATGGAGAGCTGCCAATTACAAGGGCAAATTATCACCACCTGAAGCCAAGGGTGGATGGCCTATATTTGGTCACCTTCATTTGTTTGGAGGCTCCACACCTCCTCACATAACTTTGGGAGCCATGGCGGACAAGTATGGACCCTTTTCGCTGTCTAATGCTACACAACCAATGACTTGGAACTCGCGCCCAAAGATGGCGGCTCTAGACCACATTAGCTACAACTACGCCATGTTTAGGTTCGGACCATCTGGACCCTATTGGCCAGAAATTTGCAAGATCGTCACCTTGGAGTTGCTCTCAATCCGGAAGGTTGAGCTGCTCAAGCACATTCGAGTATCGGAAGTGACTACTTTCTTGAAAGAATTGCACGAACTTTGGAGTACAAAGAAAAGGAGGGCTCGAAAGATGGAGTGGTTATAG

Protein Analysis

179

Amino Acids

20.4

Weight (kDa)

9.96

Isoelectric Point (pI)

50.69

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 301
AccIII TCCGGA 1 cut(s) 420
AciI CCGC 2 cut(s) 242, 314
AcoI YGGCCR 1 cut(s) 377
AcsI RAATTY 1 cut(s) 384
AcuI CTGAAG 1 cut(s) 177
AfaI GTAC 1 cut(s) 499
AfiI CCNNNNNNNGG 3 cut(s) 182, 310, 351
AgsI TTSAA 1 cut(s) 475
AluBI AGCT 3 cut(s) 125, 333, 433
AluI AGCT 3 cut(s) 125, 333, 433
Aor13HI TCCGGA 1 cut(s) 420
AoxI GGCC 2 cut(s) 173, 377
ApeKI GCWGC 2 cut(s) 125, 433
ApoI RAATTY 1 cut(s) 384
AspLEI GCGC 2 cut(s) 16, 303
AspS9I GGNCC 3 cut(s) 254, 359, 368
AsuHPI GGTGA 3 cut(s) 141, 179, 391
AvaII GGWCC 3 cut(s) 254, 359, 368
BalI TGGCCA 1 cut(s) 379
BanII GRGCYC 1 cut(s) 517
BbvI GCAGC 2 cut(s) 112, 420
BccI CCATC 5 cut(s) 111, 165, 304, 370, 517
BfaI CTAG 1 cut(s) 320
BfoI RGCGCY 1 cut(s) 17
BisI GCNGC 3 cut(s) 126, 315, 434
BlsI GCNGC 3 cut(s) 127, 316, 435
Bme18I GGWCC 3 cut(s) 254, 359, 368
BmgT120I GGNCC 3 cut(s) 254, 359, 368
BmiI GGNNCC 4 cut(s) 208, 235, 256, 370
BplI GAGNNNNNCTC 2 cut(s) 398, 430
BpuEI CTTGAG 1 cut(s) 422
BsaJI CCNNGG 3 cut(s) 162, 237, 402
BsaWI WCCGGW 1 cut(s) 420
Bsc4I CCNNNNNNNGG 3 cut(s) 182, 310, 351
BseAI TCCGGA 1 cut(s) 420
BseDI CCNNGG 3 cut(s) 162, 237, 402
BseGI GGATG 1 cut(s) 176
BseLI CCNNNNNNNGG 3 cut(s) 182, 310, 351
BseRI GAGGAG 1 cut(s) 207
BseXI GCAGC 2 cut(s) 112, 420
Bsh1236I CGCG 1 cut(s) 301
BshFI GGCC 2 cut(s) 175, 379
BsiSI CCGG 1 cut(s) 421
BslI CCNNNNNNNGG 3 cut(s) 182, 310, 351
BsnI GGCC 2 cut(s) 175, 379
Bsp1286I GDGCHC 1 cut(s) 517
Bsp13I TCCGGA 1 cut(s) 420
Bsp143I GATC 1 cut(s) 393
Bsp19I CCATGG 1 cut(s) 237
BspACI CCGC 2 cut(s) 242, 314
BspANI GGCC 2 cut(s) 175, 379
BspEI TCCGGA 1 cut(s) 420
BspFNI CGCG 1 cut(s) 301
BspLI GGNNCC 4 cut(s) 208, 235, 256, 370
BssECI CCNNGG 3 cut(s) 162, 237, 402
BssMI GATC 1 cut(s) 393
BssT1I CCWWGG 3 cut(s) 162, 237, 402
BstDSI CCRYGG 1 cut(s) 237
BstEII GGTNACC 1 cut(s) 185
BstF5I GGATG 1 cut(s) 176
BstFNI CGCG 1 cut(s) 301
BstH2I RGCGCY 1 cut(s) 17
BstHHI GCGC 2 cut(s) 16, 303
BstKTI GATC 1 cut(s) 396
BstMBI GATC 1 cut(s) 393
BstMWI GCNNNNNNNGC 1 cut(s) 439
BstPI GGTNACC 1 cut(s) 185
BstUI CGCG 1 cut(s) 301
BstV1I GCAGC 2 cut(s) 112, 420
BstXI CCANNNNNNTGG 1 cut(s) 291
BsuRI GGCC 2 cut(s) 175, 379
BtgI CCRYGG 1 cut(s) 237
BtsCI GGATG 1 cut(s) 176
BtsI GCAGTG 1 cut(s) 69
BtsIMutI CAGTG 1 cut(s) 69
CfoI GCGC 2 cut(s) 16, 303
Cfr13I GGNCC 3 cut(s) 254, 359, 368
Csp6I GTAC 1 cut(s) 498
CviAII CATG 3 cut(s) 5, 238, 346
CviQI GTAC 1 cut(s) 498
DpnI GATC 1 cut(s) 395
DpnII GATC 1 cut(s) 393
EaeI YGGCCR 1 cut(s) 377
EciI GGCGGA 1 cut(s) 257
Eco130I CCWWGG 3 cut(s) 162, 237, 402
Eco24I GRGCYC 1 cut(s) 517
Eco47I GGWCC 3 cut(s) 254, 359, 368
Eco57I CTGAAG 1 cut(s) 177
Eco91I GGTNACC 1 cut(s) 185
EcoO65I GGTNACC 1 cut(s) 185
EcoT14I CCWWGG 3 cut(s) 162, 237, 402
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 517
ErhI CCWWGG 3 cut(s) 162, 237, 402
FaeI CATG 3 cut(s) 8, 241, 349
FaiI YATR 8 cut(s) 6, 57, 179, 224, 239, 252, 347, 535
FatI CATG 3 cut(s) 4, 237, 345
Fnu4HI GCNGC 3 cut(s) 126, 315, 434
FokI GGATG 1 cut(s) 183
FriOI GRGCYC 1 cut(s) 517
Fsp4HI GCNGC 3 cut(s) 126, 315, 434
FspBI CTAG 1 cut(s) 320
GlaI GCGC 2 cut(s) 15, 302
GluI GCNGC 3 cut(s) 126, 315, 434
HaeII RGCGCY 1 cut(s) 17
HaeIII GGCC 2 cut(s) 175, 379
HapII CCGG 1 cut(s) 421
HhaI GCGC 2 cut(s) 16, 303
Hin1II CATG 3 cut(s) 8, 241, 349
Hin6I GCGC 2 cut(s) 14, 301
HinP1I GCGC 2 cut(s) 14, 301
HinfI GANTC 1 cut(s) 44
HpaII CCGG 1 cut(s) 421
HphI GGTGA 3 cut(s) 141, 179, 391
Hpy188I TCNGA 2 cut(s) 359, 457
Hpy188III TCNNGA 5 cut(s) 111, 320, 366, 421, 472
HpyAV CCTTC 2 cut(s) 200, 418
HpyCH4V TGCA 5 cut(s) 4, 35, 59, 390, 484
HpyF10VI GCNNNNNNNGC 1 cut(s) 439
Hsp92II CATG 3 cut(s) 8, 241, 349
HspAI GCGC 2 cut(s) 14, 301
Kpn2I TCCGGA 1 cut(s) 420
Kzo9I GATC 1 cut(s) 393
LmnI GCTCC 2 cut(s) 212, 233
LpnPI CCDG 5 cut(s) 60, 168, 351, 393, 434
Lsp1109I GCAGC 2 cut(s) 112, 420
MaeI CTAG 1 cut(s) 320
MaeIII GTNAC 3 cut(s) 185, 397, 460
MalI GATC 1 cut(s) 395
MboI GATC 1 cut(s) 393
MboII GAAGA 1 cut(s) 126
MhlI GDGCHC 1 cut(s) 517
MlsI TGGCCA 1 cut(s) 379
MluCI AATT 4 cut(s) 130, 143, 384, 479
MluNI TGGCCA 1 cut(s) 379
MnlI CCTC 4 cut(s) 197, 225, 228, 504
Mox20I TGGCCA 1 cut(s) 379
Mph1103I ATGCAT 1 cut(s) 6
MroI TCCGGA 1 cut(s) 420
MscI TGGCCA 1 cut(s) 379
MslI CAYNNNNRTG 1 cut(s) 115
Msp20I TGGCCA 1 cut(s) 379
MspI CCGG 1 cut(s) 421
MvnI CGCG 1 cut(s) 301
MwoI GCNNNNNNNGC 1 cut(s) 439
NcoI CCATGG 1 cut(s) 237
NdeII GATC 1 cut(s) 393
NlaIII CATG 3 cut(s) 8, 241, 349
NlaIV GGNNCC 4 cut(s) 208, 235, 256, 370
NmuCI GTSAC 3 cut(s) 185, 397, 460
NsiI ATGCAT 1 cut(s) 6
PfeI GAWTC 1 cut(s) 44
PkrI GCNGC 3 cut(s) 127, 316, 435
PspEI GGTNACC 1 cut(s) 185
PspN4I GGNNCC 4 cut(s) 208, 235, 256, 370
PspPI GGNCC 3 cut(s) 254, 359, 368
RsaI GTAC 1 cut(s) 499
RsaNI GTAC 1 cut(s) 498
RseI CAYNNNNRTG 1 cut(s) 115
SatI GCNGC 3 cut(s) 126, 315, 434
Sau3AI GATC 1 cut(s) 393
Sau96I GGNCC 3 cut(s) 254, 359, 368
SduI GDGCHC 1 cut(s) 517
SetI ASST 9 cut(s) 127, 157, 192, 217, 335, 356, 404, 429, 435
SinI GGWCC 3 cut(s) 254, 359, 368
SmiMI CAYNNNNRTG 1 cut(s) 115
SmlI CTYRAG 1 cut(s) 437
SmoI CTYRAG 1 cut(s) 437
Sse9I AATT 4 cut(s) 130, 143, 384, 479
SsiI CCGC 2 cut(s) 242, 314
SspMI CTAG 1 cut(s) 320
StyI CCWWGG 3 cut(s) 162, 237, 402
TaqI TCGA 2 cut(s) 448, 517
TasI AATT 4 cut(s) 130, 143, 384, 479
TatI WGTACW 1 cut(s) 497
TauI GCSGC 1 cut(s) 317
TfiI GAWTC 1 cut(s) 44
TscAI CASTG 1 cut(s) 76
TseFI GTSAC 3 cut(s) 185, 397, 460
TseI GCWGC 2 cut(s) 125, 433
Tsp45I GTSAC 3 cut(s) 185, 397, 460
TspDTI ATGAA 1 cut(s) 182
TspRI CASTG 1 cut(s) 76
VpaK11BI GGWCC 3 cut(s) 254, 359, 368
XapI RAATTY 1 cut(s) 384
XbaI TCTAGA 1 cut(s) 319
XspI CTAG 1 cut(s) 320
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.