RLG00000011364

cytochrome P450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
8878764 .. 8879565
802 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011364

Sequence Viewer

Length: 726 bp
ATGGATCATCTCCTTGCTTATGTGAACTTATATGTCACGGCGGGATTAATCTTCGCAATAACAATCGTCCTATATTTCTATTATTTTTCGCAGAGAAGGACATGGAGAGCTTCCGCTAAACGCAGATTAGCACCTCAAGCCAAGGGAGCTTGGCCCGTGCTTGGCCACCTTCCGTTGCTAGGAGGATCCACACCTCCCCAAATCATCCTGGGAGCCATGGCTGACAAGTATGGTCCCCTTTTTACTATACGCCTTGGAATCTATCCAACTTTGGTGGTGAGCAGTGGTGAAATGGCTAAGGAATGCTTTACAATCCATGACATGGCTGCGTCCTCGCGCCCCAAAATGGCAGCTGTGGAACTCATGGGATACAACTATGCCATGTTTGGATTTGCACCCTCCGGACCATATTGGCGAGAAGTGCGTAAACTAGCAACCTTGGGGTTGCTCTCCAACCGCCGGATTCAGTTGCTTAAAGACATTCGAGTCTCCGAAGTGGCTAGCTTCCTGAAAGAATTGTACAAAACTTGGAGTGCAGGTAGTACTACAGATCATTACCATGTAGCTTTGGTCGAGTTGAAACAATGGTTTGGGGACTTGACTCTTAACGTTATACTTAGAATGGTAGCTGGAAAACGCTACTCATTCATAAGTGATTCCGCGAATGATGATGAGAAGAAAGAAGCGGCTCGCGTGCAGGATGCAGTGGTCATGAAAAGGCCATGA

Protein Analysis

242

Amino Acids

27.1

Weight (kDa)

9.71

Isoelectric Point (pI)

42.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 45 - 222 1.5e-17 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 485
Acc36I ACCTGC 1 cut(s) 527
AccB7I CCANNNNNTGG 1 cut(s) 322
AccII CGCG 3 cut(s) 337, 662, 693
AccIII TCCGGA 1 cut(s) 401
AciI CCGC 5 cut(s) 41, 114, 457, 660, 686
AclI AACGTT 1 cut(s) 609
AclWI GGATC 3 cut(s) 12, 180, 193
AcoI YGGCCR 1 cut(s) 163
AfaI GTAC 2 cut(s) 521, 544
AfiI CCNNNNNNNGG 5 cut(s) 161, 179, 322, 346, 459
AgsI TTSAA 1 cut(s) 580
AjnI CCWGG 1 cut(s) 207
AluBI AGCT 6 cut(s) 110, 149, 353, 504, 566, 629
AluI AGCT 6 cut(s) 110, 149, 353, 504, 566, 629
Alw26I GTCTC 1 cut(s) 493
AlwI GGATC 3 cut(s) 12, 180, 193
Aor13HI TCCGGA 1 cut(s) 401
AoxI GGCC 3 cut(s) 152, 163, 719
ApeKI GCWGC 2 cut(s) 326, 350
AseI ATTAAT 1 cut(s) 47
AspLEI GCGC 1 cut(s) 339
AspS9I GGNCC 3 cut(s) 153, 233, 404
AsuHPI GGTGA 2 cut(s) 289, 299
AsuNHI GCTAGC 1 cut(s) 500
AvaII GGWCC 2 cut(s) 233, 404
BalI TGGCCA 1 cut(s) 165
BamHI GGATCC 1 cut(s) 185
BbvI GCAGC 2 cut(s) 313, 362
BceAI ACGGC 1 cut(s) 54
BciT130I CCWGG 1 cut(s) 209
BciVI GTATCC 1 cut(s) 362
BcoDI GTCTC 1 cut(s) 493
BfaI CTAG 3 cut(s) 179, 431, 501
BfmI CTRYAG 1 cut(s) 546
BfuAI ACCTGC 1 cut(s) 527
BfuI GTATCC 1 cut(s) 362
BisI GCNGC 3 cut(s) 327, 351, 687
BlsI GCNGC 3 cut(s) 328, 352, 688
BmcAI AGTACT 1 cut(s) 544
Bme1390I CCNGG 1 cut(s) 209
Bme18I GGWCC 2 cut(s) 233, 404
BmgT120I GGNCC 3 cut(s) 153, 233, 404
BmiI GGNNCC 3 cut(s) 187, 214, 235
BmrFI CCNGG 1 cut(s) 209
BmsI GCATC 1 cut(s) 691
BmtI GCTAGC 1 cut(s) 504
Bpu10I CCTNAGC 1 cut(s) 297
BpuEI CTTGAG 1 cut(s) 120
BsaJI CCNNGG 5 cut(s) 141, 208, 216, 253, 438
BsaWI WCCGGW 1 cut(s) 401
BsaXI ACNNNNNCTCC 2 cut(s) 523, 553
Bsc4I CCNNNNNNNGG 5 cut(s) 161, 179, 322, 346, 459
BseAI TCCGGA 1 cut(s) 401
BseBI CCWGG 1 cut(s) 209
BseDI CCNNGG 5 cut(s) 141, 208, 216, 253, 438
BseGI GGATG 2 cut(s) 204, 706
BseLI CCNNNNNNNGG 5 cut(s) 161, 179, 322, 346, 459
BseXI GCAGC 2 cut(s) 313, 362
BsgI GTGCAG 2 cut(s) 555, 716
Bsh1236I CGCG 3 cut(s) 337, 662, 693
BshFI GGCC 3 cut(s) 154, 165, 721
BsiSI CCGG 2 cut(s) 402, 460
BslFI GGGAC 2 cut(s) 219, 608
BslI CCNNNNNNNGG 5 cut(s) 161, 179, 322, 346, 459
BsmAI GTCTC 1 cut(s) 493
BsmFI GGGAC 2 cut(s) 219, 608
BsmI GAATGC 1 cut(s) 308
BsnI GGCC 3 cut(s) 154, 165, 721
Bsp13I TCCGGA 1 cut(s) 401
Bsp1407I TGTACA 1 cut(s) 519
Bsp143I GATC 3 cut(s) 4, 185, 550
Bsp19I CCATGG 1 cut(s) 216
BspACI CCGC 5 cut(s) 41, 114, 457, 660, 686
BspANI GGCC 3 cut(s) 154, 165, 721
BspEI TCCGGA 1 cut(s) 401
BspFNI CGCG 3 cut(s) 337, 662, 693
BspHI TCATGA 1 cut(s) 711
BspLI GGNNCC 3 cut(s) 187, 214, 235
BspMI ACCTGC 1 cut(s) 527
BspOI GCTAGC 1 cut(s) 504
BspPI GGATC 3 cut(s) 12, 180, 193
BsrGI TGTACA 1 cut(s) 519
BssECI CCNNGG 5 cut(s) 141, 208, 216, 253, 438
BssMI GATC 3 cut(s) 4, 185, 550
BssT1I CCWWGG 4 cut(s) 141, 216, 253, 438
Bst2UI CCWGG 1 cut(s) 209
BstAUI TGTACA 1 cut(s) 519
BstC8I GCNNGC 3 cut(s) 502, 691, 695
BstDEI CTNAG 2 cut(s) 297, 617
BstDSI CCRYGG 1 cut(s) 216
BstF5I GGATG 2 cut(s) 204, 706
BstFNI CGCG 3 cut(s) 337, 662, 693
BstHHI GCGC 1 cut(s) 339
BstKTI GATC 3 cut(s) 7, 188, 553
BstMAI GTCTC 1 cut(s) 493
BstMBI GATC 3 cut(s) 4, 185, 550
BstMWI GCNNNNNNNGC 3 cut(s) 137, 146, 421
BstNI CCWGG 1 cut(s) 209
BstSCI CCNGG 1 cut(s) 207
BstSFI CTRYAG 1 cut(s) 546
BstUI CGCG 3 cut(s) 337, 662, 693
BstV1I GCAGC 2 cut(s) 313, 362
BstX2I RGATCY 1 cut(s) 185
BstYI RGATCY 1 cut(s) 185
BsuI GTATCC 1 cut(s) 362
BsuRI GGCC 3 cut(s) 154, 165, 721
BtgI CCRYGG 1 cut(s) 216
BtsCI GGATG 2 cut(s) 204, 706
BtsI GCAGTG 2 cut(s) 289, 711
BtsIMutI CAGTG 2 cut(s) 289, 711
BveI ACCTGC 1 cut(s) 527
Cac8I GCNNGC 3 cut(s) 502, 691, 695
CciI TCATGA 1 cut(s) 711
CfoI GCGC 1 cut(s) 339
Cfr13I GGNCC 3 cut(s) 153, 233, 404
CseI GACGC 1 cut(s) 318
Csp6I GTAC 2 cut(s) 520, 543
CspCI CAANNNNNGTGG 2 cut(s) 255, 290
CviAII CATG 9 cut(s) 102, 217, 317, 322, 364, 382, 560, 712, 723
CviQI GTAC 2 cut(s) 520, 543
DdeI CTNAG 2 cut(s) 297, 617
DpnI GATC 3 cut(s) 6, 187, 552
DpnII GATC 3 cut(s) 4, 185, 550
DrdI GACNNNNNNGTC 1 cut(s) 485
DseDI GACNNNNNNGTC 1 cut(s) 485
EaeI YGGCCR 1 cut(s) 163
Eco130I CCWWGG 4 cut(s) 141, 216, 253, 438
Eco47I GGWCC 2 cut(s) 233, 404
EcoRII CCWGG 1 cut(s) 207
EcoT14I CCWWGG 4 cut(s) 141, 216, 253, 438
ErhI CCWWGG 4 cut(s) 141, 216, 253, 438
FaeI CATG 9 cut(s) 105, 220, 320, 325, 367, 385, 563, 715, 726
FalI AAGNNNNNCTT 2 cut(s) 290, 322
FaqI GGGAC 2 cut(s) 219, 608
FatI CATG 9 cut(s) 101, 216, 316, 321, 363, 381, 559, 711, 722
FauI CCCGC 1 cut(s) 34
Fnu4HI GCNGC 3 cut(s) 327, 351, 687
FokI GGATG 2 cut(s) 191, 713
Fsp4HI GCNGC 3 cut(s) 327, 351, 687
FspBI CTAG 3 cut(s) 179, 431, 501
GlaI GCGC 1 cut(s) 338
GluI GCNGC 3 cut(s) 327, 351, 687
HaeIII GGCC 3 cut(s) 154, 165, 721
HapII CCGG 2 cut(s) 402, 460
HgaI GACGC 1 cut(s) 318
HhaI GCGC 1 cut(s) 339
Hin1II CATG 9 cut(s) 105, 220, 320, 325, 367, 385, 563, 715, 726
Hin6I GCGC 1 cut(s) 337
HinP1I GCGC 1 cut(s) 337
HinfI GANTC 5 cut(s) 258, 463, 486, 601, 656
HpaII CCGG 2 cut(s) 402, 460
HphI GGTGA 2 cut(s) 289, 299
Hpy166II GTNNAC 2 cut(s) 25, 428
Hpy188I TCNGA 1 cut(s) 493
Hpy188III TCNNGA 3 cut(s) 402, 508, 712
Hpy8I GTNNAC 2 cut(s) 25, 428
HpyAV CCTTC 2 cut(s) 90, 179
HpyCH4IV ACGT 1 cut(s) 609
HpyCH4V TGCA 4 cut(s) 395, 536, 697, 704
HpyF10VI GCNNNNNNNGC 3 cut(s) 137, 146, 421
HpyF3I CTNAG 2 cut(s) 297, 617
HpySE526I ACGT 1 cut(s) 609
Hsp92II CATG 9 cut(s) 105, 220, 320, 325, 367, 385, 563, 715, 726
HspAI GCGC 1 cut(s) 337
Kpn2I TCCGGA 1 cut(s) 401
Kzo9I GATC 3 cut(s) 4, 185, 550
LmnI GCTCC 2 cut(s) 146, 212
LpnPI CCDG 8 cut(s) 194, 221, 415, 473, 521, 522, 615, 683
Lsp1109I GCAGC 2 cut(s) 313, 362
LweI GCATC 1 cut(s) 691
MaeI CTAG 3 cut(s) 179, 431, 501
MaeII ACGT 1 cut(s) 609
MaeIII GTNAC 1 cut(s) 34
MalI GATC 3 cut(s) 6, 187, 552
MboI GATC 3 cut(s) 4, 185, 550
MboII GAAGA 2 cut(s) 43, 688
MflI RGATCY 1 cut(s) 185
MlsI TGGCCA 1 cut(s) 165
MluCI AATT 1 cut(s) 515
MluNI TGGCCA 1 cut(s) 165
MlyI GAGTC 2 cut(s) 495, 595
MmeI TCCRAC 2 cut(s) 290, 477
MnlI CCTC 5 cut(s) 144, 176, 204, 343, 409
Mox20I TGGCCA 1 cut(s) 165
MroI TCCGGA 1 cut(s) 401
MscI TGGCCA 1 cut(s) 165
MseI TTAA 3 cut(s) 47, 474, 606
MslI CAYNNNNRTG 1 cut(s) 558
Msp20I TGGCCA 1 cut(s) 165
MspA1I CMGCKG 1 cut(s) 353
MspI CCGG 2 cut(s) 402, 460
MspR9I CCNGG 1 cut(s) 209
Mva1269I GAATGC 1 cut(s) 308
MvaI CCWGG 1 cut(s) 209
MvnI CGCG 3 cut(s) 337, 662, 693
MwoI GCNNNNNNNGC 3 cut(s) 137, 146, 421
NcoI CCATGG 1 cut(s) 216
NdeII GATC 3 cut(s) 4, 185, 550
NheI GCTAGC 1 cut(s) 500
NlaIII CATG 9 cut(s) 105, 220, 320, 325, 367, 385, 563, 715, 726
NlaIV GGNNCC 3 cut(s) 187, 214, 235
NmuCI GTSAC 1 cut(s) 34
PagI TCATGA 1 cut(s) 711
PctI GAATGC 1 cut(s) 308
PfeI GAWTC 3 cut(s) 258, 463, 656
PflMI CCANNNNNTGG 1 cut(s) 322
PkrI GCNGC 3 cut(s) 328, 352, 688
PleI GAGTC 2 cut(s) 494, 595
PpsI GAGTC 2 cut(s) 494, 595
PshBI ATTAAT 1 cut(s) 47
Psp1406I AACGTT 1 cut(s) 609
Psp6I CCWGG 1 cut(s) 207
PspGI CCWGG 1 cut(s) 207
PspN4I GGNNCC 3 cut(s) 187, 214, 235
PspPI GGNCC 3 cut(s) 153, 233, 404
PsuI RGATCY 1 cut(s) 185
PvuII CAGCTG 1 cut(s) 353
RsaI GTAC 2 cut(s) 521, 544
RsaNI GTAC 2 cut(s) 520, 543
RseI CAYNNNNRTG 1 cut(s) 558
SaqAI TTAA 3 cut(s) 47, 474, 606
SatI GCNGC 3 cut(s) 327, 351, 687
Sau3AI GATC 3 cut(s) 4, 185, 550
Sau96I GGNCC 3 cut(s) 153, 233, 404
ScaI AGTACT 1 cut(s) 544
SchI GAGTC 2 cut(s) 495, 595
ScrFI CCNGG 1 cut(s) 209
SfaNI GCATC 1 cut(s) 691
SfcI CTRYAG 1 cut(s) 546
SinI GGWCC 2 cut(s) 233, 404
SmiMI CAYNNNNRTG 1 cut(s) 558
SmlI CTYRAG 1 cut(s) 135
SmoI CTYRAG 1 cut(s) 135
Sse9I AATT 1 cut(s) 515
SsiI CCGC 5 cut(s) 41, 114, 457, 660, 686
SspMI CTAG 3 cut(s) 179, 431, 501
StyD4I CCNGG 1 cut(s) 207
StyI CCWWGG 4 cut(s) 141, 216, 253, 438
TaiI ACGT 1 cut(s) 612
TaqI TCGA 2 cut(s) 484, 573
TasI AATT 1 cut(s) 515
TatI WGTACW 2 cut(s) 519, 542
TauI GCSGC 1 cut(s) 689
TfiI GAWTC 3 cut(s) 258, 463, 656
Tru1I TTAA 3 cut(s) 47, 474, 606
Tru9I TTAA 3 cut(s) 47, 474, 606
TscAI CASTG 2 cut(s) 289, 711
TseFI GTSAC 1 cut(s) 34
TseI GCWGC 2 cut(s) 326, 350
Tsp45I GTSAC 1 cut(s) 34
TspDTI ATGAA 1 cut(s) 637
TspGWI ACGGA 1 cut(s) 162
TspRI CASTG 2 cut(s) 289, 711
Van91I CCANNNNNTGG 1 cut(s) 322
VpaK11BI GGWCC 2 cut(s) 233, 404
VspI ATTAAT 1 cut(s) 47
XspI CTAG 3 cut(s) 179, 431, 501
ZrmI AGTACT 1 cut(s) 544
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.