FvH4_1g17460

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000137
Physical Location & Seq
Reverse (-)
10126534 .. 10128421
1888 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g17460.t1

Sequence Viewer

Length: 1635 bp
ATGGATTTTCTCGTTCCTTGTGAAAATTCTTTCACCGCTGGATTATTTGCAATTGTTGTTGTGTGTTTCTATTATCTATCAGAAAGATACTACTACTGGCCGAAGGTGAAATTAGCACCTGAAGCAAAGGGTGCATGGCCTTTTCTAGGTCACCTTCCCTTGTTCGGAGGATCGCAGCCTCCCCACATAACGTTCGGAGCCATGGCTGACAAGTATGGACCTCTTTTCTCGGTACGGCTCGGTGTCTATCCAACTTTGGTGGTGAGCAGCAGTGAGGTAGCCAAGGAATGCTTTACAACCCTTGACTTGAAAGCCTCTTCGCGCCCGAAAATGAAAGCTGTGCAAATCATAGGCTATGACAATGCCATGTTCGGGTTCACTTCCTCCGGACCATACTGGCGAGAGATTCGTAGGATTGCGACTCTTGATCTGCTCTCCAACCGCAGGCTACAGATTCTCGGACACATCCGAGTATCCGAAGTTCGGACCTACTTGAAAGAGTTGTACAAAACTTGGAGCAACACTAGTATGATCAAGAAGACGGAGGGCAGCTGTGGTGGTGATGGAGTAGTGTTGGTGGAGTTGAAACAGATGCTTGGGGACTTGACTCTCAATGTGATTGTTAGGATGATTGCTGGAAAGCGCTACTCCATTACTACTGATGAGAAGGAGAAGGAAGAAGCGCGTCGAGTACAGGATGCATTCAGAGAGTTCTCTTACTTTATCGGGCTTTTGGCGGTGGGTGATGCTCTTCCCTATCTTCAGTGGCTGGATTTAGGTGGACATGAGAAGGGGATGAAGAAAACTGCAGAGAAAATACACGCCATTTTTGGAGGGTGGCTAGAAGAACATAAGCAAAAGAAAGCACTCAAATCCCATGGTGGTGATGCTAAAGGGGATGATGATCAAGACTTCATGGACGCGATGATTTCAGAACTTGAAGGGGTAGACTTTGGTGGTTATGATGCTGATACCGTCAATAAAGCTACATGCTTGGTATGGATCCGCTTGATGCTGATTGCAGGAGGTAGCGATACCACCTTGGTTACATTAACTTGGGCAATATCATTGTTGTTGAACAATGTTAACGTGCTCAACAAGGCTCAAGAGGAACTCGACACCGTTATAGGCAGAGAAAACGTTGTGACTGAGTCAGATTTGAGCAAGCTGGTGTACATCCAAGCCATAGTGAAAGAAACTCTCCGTTTATATCCTGCAGCACCATTATCGGCACCACATGAATTCAACGAGGATTGTACCCTAGCTGGTTATCATGTCCCCAAGGGCACACGGTTGATCACAAACCTCTGGAAGATTCATACCGACCCGGGAACATGGTCCGACCCATTAGAGTTCAAGCCGGAGAGATTCATGACCACCCACAAGAACACTGATGTTCGGGGTCAGCATTTTGAGCTAATTCCCTTTGGAAGTGGTAGAAGAGTATGCCCTGGTTTATCATTTGGCCTTCAAACGGTACAGTTCACATTGGCTAGTTTCCTCCATGCATTCGAAATCTCCACTCCCTCTAATGTTCCTGTTGATATGTCCGAAAGCTCTGGTCTCACAAACATCAAAGCCACTCCGCTTGAAGTTCTTATCAAACCTCGGTTGCCTTCCCAACTTTATGCATAA

Protein Analysis

545

Amino Acids

60.76

Weight (kDa)

6.52

Isoelectric Point (pI)

38.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 43 - 523 1.5e-85 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1231
AccI GTMKAC 1 cut(s) 948
AccII CGCG 3 cut(s) 322, 685, 923
AccIII TCCGGA 1 cut(s) 386
AciI CCGC 5 cut(s) 36, 442, 737, 1006, 1586
AclI AACGTT 2 cut(s) 191, 1140
AclWI GGATC 3 cut(s) 178, 997, 1010
AcoI YGGCCR 1 cut(s) 98
AcsI RAATTY 2 cut(s) 25, 1241
AcuI CTGAAG 2 cut(s) 141, 746
AfaI GTAC 6 cut(s) 234, 506, 693, 1175, 1258, 1479
AfeI AGCGCT 1 cut(s) 644
AfiI CCNNNNNNNGG 6 cut(s) 146, 164, 372, 444, 483, 1474
AgsI TTSAA 9 cut(s) 310, 496, 586, 941, 1078, 1246, 1357, 1472, 1592
AhlI ACTAGT 1 cut(s) 524
AjnI CCWGG 1 cut(s) 1450
AluBI AGCT 7 cut(s) 338, 552, 986, 1168, 1265, 1417, 1557
AluI AGCT 7 cut(s) 338, 552, 986, 1168, 1265, 1417, 1557
Alw21I GWGCWC 1 cut(s) 1095
Alw26I GTCTC 1 cut(s) 1568
AlwI GGATC 3 cut(s) 178, 997, 1010
AlwNI CAGNNNCTG 1 cut(s) 769
Ama87I CYCGRG 1 cut(s) 1327
Aor13HI TCCGGA 1 cut(s) 386
Aor51HI AGCGCT 1 cut(s) 644
AoxI GGCC 3 cut(s) 98, 137, 1465
ApeKI GCWGC 4 cut(s) 175, 267, 549, 1217
ApoI RAATTY 2 cut(s) 25, 1241
AspLEI GCGC 3 cut(s) 324, 645, 685
AspS9I GGNCC 4 cut(s) 218, 389, 486, 1338
AsuC2I CCSGG 2 cut(s) 1328, 1329
AsuHPI GGTGA 7 cut(s) 25, 118, 143, 274, 572, 755, 896
AsuII TTCGAA 1 cut(s) 1512
AvaI CYCGRG 1 cut(s) 1327
AvaII GGWCC 4 cut(s) 218, 389, 486, 1338
BaeGI GKGCMC 1 cut(s) 1289
BamHI GGATCC 1 cut(s) 1002
BanI GGYRCC 1 cut(s) 1231
BbsI GAAGAC 1 cut(s) 545
Bbv12I GWGCWC 1 cut(s) 1095
BbvI GCAGC 4 cut(s) 187, 279, 561, 1229
BccI CCATC 1 cut(s) 557
BceAI ACGGC 1 cut(s) 251
BcgI CGANNNNNNTGC 2 cut(s) 1209, 1243
BciT130I CCWGG 1 cut(s) 1452
BciVI GTATCC 1 cut(s) 484
BclI TGATCA 3 cut(s) 531, 904, 1296
BcnI CCSGG 2 cut(s) 1328, 1329
BcoDI GTCTC 1 cut(s) 1568
BcuI ACTAGT 1 cut(s) 524
BfaI CTAG 5 cut(s) 146, 525, 842, 1262, 1494
BfmI CTRYAG 3 cut(s) 449, 807, 1215
BfoI RGCGCY 1 cut(s) 646
BfuI GTATCC 1 cut(s) 484
BisI GCNGC 4 cut(s) 176, 268, 550, 1218
BlsI GCNGC 4 cut(s) 177, 269, 551, 1219
Bme1390I CCNGG 3 cut(s) 1328, 1329, 1452
Bme18I GGWCC 4 cut(s) 218, 389, 486, 1338
BmeT110I CYCGRG 1 cut(s) 1327
BmgT120I GGNCC 4 cut(s) 218, 389, 486, 1338
BmiI GGNNCC 3 cut(s) 199, 1004, 1233
BmrFI CCNGG 3 cut(s) 1328, 1329, 1452
BmsI GCATC 6 cut(s) 582, 688, 736, 877, 955, 1002
BpiI GAAGAC 1 cut(s) 545
Bpu14I TTCGAA 1 cut(s) 1512
BpuEI CTTGAG 1 cut(s) 1089
BpuMI CCSGG 2 cut(s) 1328, 1329
BsaBI GATNNNNATC 1 cut(s) 903
BsaI GGTCTC 1 cut(s) 1568
BsaJI CCNNGG 8 cut(s) 201, 282, 877, 1041, 1281, 1327, 1450, 1607
BsaWI WCCGGW 1 cut(s) 386
Bsc4I CCNNNNNNNGG 6 cut(s) 146, 164, 372, 444, 483, 1474
Bse1I ACTGG 2 cut(s) 101, 401
Bse8I GATNNNNATC 1 cut(s) 903
BseAI TCCGGA 1 cut(s) 386
BseBI CCWGG 1 cut(s) 1452
BseDI CCNNGG 8 cut(s) 201, 282, 877, 1041, 1281, 1327, 1450, 1607
BseGI GGATG 6 cut(s) 465, 633, 703, 801, 904, 1176
BseJI GATNNNNATC 1 cut(s) 903
BseLI CCNNNNNNNGG 6 cut(s) 146, 164, 372, 444, 483, 1474
BseMII CTCAG 1 cut(s) 1140
BseNI ACTGG 2 cut(s) 101, 401
BseSI GKGCMC 1 cut(s) 1289
BseXI GCAGC 4 cut(s) 187, 279, 561, 1229
Bsh1236I CGCG 3 cut(s) 322, 685, 923
BshFI GGCC 3 cut(s) 100, 139, 1467
BshNI GGYRCC 1 cut(s) 1231
BsiHKAI GWGCWC 1 cut(s) 1095
BsiHKCI CYCGRG 1 cut(s) 1327
BsiSI CCGG 3 cut(s) 387, 1328, 1361
BslFI GGGAC 2 cut(s) 614, 1262
BslI CCNNNNNNNGG 6 cut(s) 146, 164, 372, 444, 483, 1474
BsmAI GTCTC 1 cut(s) 1568
BsmFI GGGAC 2 cut(s) 614, 1262
BsmI GAATGC 3 cut(s) 293, 701, 1508
BsnI GGCC 3 cut(s) 100, 139, 1467
Bso31I GGTCTC 1 cut(s) 1568
BsoBI CYCGRG 1 cut(s) 1327
Bsp119I TTCGAA 1 cut(s) 1512
Bsp1286I GDGCHC 2 cut(s) 1095, 1289
Bsp13I TCCGGA 1 cut(s) 386
Bsp1407I TGTACA 2 cut(s) 504, 1173
Bsp143I GATC 6 cut(s) 170, 427, 531, 904, 1002, 1296
Bsp19I CCATGG 2 cut(s) 201, 877
BspACI CCGC 5 cut(s) 36, 442, 737, 1006, 1586
BspANI GGCC 3 cut(s) 100, 139, 1467
BspCNI CTCAG 1 cut(s) 1141
BspEI TCCGGA 1 cut(s) 386
BspFNI CGCG 3 cut(s) 322, 685, 923
BspHI TCATGA 1 cut(s) 1371
BspLI GGNNCC 3 cut(s) 199, 1004, 1233
BspMAI CTGCAG 2 cut(s) 811, 1219
BspPI GGATC 3 cut(s) 178, 997, 1010
BspQI GCTCTTC 1 cut(s) 756
BspT104I TTCGAA 1 cut(s) 1512
BspT107I GGYRCC 1 cut(s) 1231
BspTNI GGTCTC 1 cut(s) 1568
BsrGI TGTACA 2 cut(s) 504, 1173
BsrI ACTGG 2 cut(s) 101, 401
BssECI CCNNGG 8 cut(s) 201, 282, 877, 1041, 1281, 1327, 1450, 1607
BssMI GATC 6 cut(s) 170, 427, 531, 904, 1002, 1296
BssT1I CCWWGG 5 cut(s) 201, 282, 877, 1041, 1281
Bst2UI CCWGG 1 cut(s) 1452
Bst4CI ACNGT 5 cut(s) 976, 1123, 1293, 1477, 1482
Bst6I CTCTTC 3 cut(s) 322, 756, 1435
BstAPI GCANNNNNTGC 1 cut(s) 131
BstAUI TGTACA 2 cut(s) 504, 1173
BstBI TTCGAA 1 cut(s) 1512
BstC8I GCNNGC 2 cut(s) 446, 1166
BstDEI CTNAG 1 cut(s) 1149
BstDSI CCRYGG 2 cut(s) 201, 877
BstEII GGTNACC 1 cut(s) 149
BstENI CCTNNNNNAGG 1 cut(s) 144
BstF5I GGATG 6 cut(s) 465, 633, 703, 801, 904, 1176
BstFNI CGCG 3 cut(s) 322, 685, 923
BstH2I RGCGCY 1 cut(s) 646
BstHHI GCGC 3 cut(s) 324, 645, 685
BstKTI GATC 6 cut(s) 173, 430, 534, 907, 1005, 1299
BstMAI GTCTC 1 cut(s) 1568
BstMBI GATC 6 cut(s) 170, 427, 531, 904, 1002, 1296
BstMWI GCNNNNNNNGC 3 cut(s) 122, 131, 1414
BstNI CCWGG 1 cut(s) 1452
BstNSI RCATGY 1 cut(s) 993
BstPI GGTNACC 1 cut(s) 149
BstSCI CCNGG 3 cut(s) 1326, 1327, 1450
BstSFI CTRYAG 3 cut(s) 449, 807, 1215
BstSLI GKGCMC 1 cut(s) 1289
BstUI CGCG 3 cut(s) 322, 685, 923
BstV1I GCAGC 4 cut(s) 187, 279, 561, 1229
BstV2I GAAGAC 1 cut(s) 545
BstX2I RGATCY 1 cut(s) 1002
BstYI RGATCY 1 cut(s) 1002
BsuI GTATCC 1 cut(s) 484
BsuRI GGCC 3 cut(s) 100, 139, 1467
BtgI CCRYGG 2 cut(s) 201, 877
BtgZI GCGATG 1 cut(s) 938
BtsCI GGATG 6 cut(s) 465, 633, 703, 801, 904, 1176
BtsI GCAGTG 1 cut(s) 277
BtsIMutI CAGTG 3 cut(s) 277, 770, 1389
Cac8I GCNNGC 2 cut(s) 446, 1166
CaiI CAGNNNCTG 1 cut(s) 769
CciI TCATGA 1 cut(s) 1371
CfoI GCGC 3 cut(s) 324, 645, 685
Cfr13I GGNCC 4 cut(s) 218, 389, 486, 1338
Cfr9I CCCGGG 1 cut(s) 1327
CseI GACGC 2 cut(s) 674, 929
Csp6I GTAC 6 cut(s) 233, 505, 692, 1174, 1257, 1478
CspCI CAANNNNNGTGG 4 cut(s) 240, 275, 1570, 1605
CviQI GTAC 6 cut(s) 233, 505, 692, 1174, 1257, 1478
DdeI CTNAG 1 cut(s) 1149
DpnI GATC 6 cut(s) 172, 429, 533, 906, 1004, 1298
DpnII GATC 6 cut(s) 170, 427, 531, 904, 1002, 1296
EaeI YGGCCR 1 cut(s) 98
Eam1104I CTCTTC 3 cut(s) 322, 756, 1435
EarI CTCTTC 3 cut(s) 322, 756, 1435
Eco130I CCWWGG 5 cut(s) 201, 282, 877, 1041, 1281
Eco31I GGTCTC 1 cut(s) 1568
Eco47I GGWCC 4 cut(s) 218, 389, 486, 1338
Eco47III AGCGCT 1 cut(s) 644
Eco57I CTGAAG 2 cut(s) 141, 746
Eco88I CYCGRG 1 cut(s) 1327
Eco91I GGTNACC 1 cut(s) 149
EcoNI CCTNNNNNAGG 1 cut(s) 144
EcoO65I GGTNACC 1 cut(s) 149
EcoRI GAATTC 1 cut(s) 1241
EcoRII CCWGG 1 cut(s) 1450
EcoT14I CCWWGG 5 cut(s) 201, 282, 877, 1041, 1281
EcoT22I ATGCAT 3 cut(s) 703, 1510, 1633
ErhI CCWWGG 5 cut(s) 201, 282, 877, 1041, 1281
FalI AAGNNNNNCTT 2 cut(s) 275, 307
FaqI GGGAC 2 cut(s) 614, 1262
FbaI TGATCA 3 cut(s) 531, 904, 1296
FblI GTMKAC 1 cut(s) 948
Fnu4HI GCNGC 4 cut(s) 176, 268, 550, 1218
FokI GGATG 6 cut(s) 452, 640, 710, 808, 911, 1163
Fsp4HI GCNGC 4 cut(s) 176, 268, 550, 1218
FspBI CTAG 5 cut(s) 146, 525, 842, 1262, 1494
GlaI GCGC 3 cut(s) 323, 644, 684
GluI GCNGC 4 cut(s) 176, 268, 550, 1218
HaeII RGCGCY 1 cut(s) 646
HaeIII GGCC 3 cut(s) 100, 139, 1467
HapII CCGG 3 cut(s) 387, 1328, 1361
HgaI GACGC 2 cut(s) 674, 929
HhaI GCGC 3 cut(s) 324, 645, 685
Hin6I GCGC 3 cut(s) 322, 643, 683
HinP1I GCGC 3 cut(s) 322, 643, 683
HincII GTYRAC 1 cut(s) 1087
HindII GTYRAC 1 cut(s) 1087
HinfI GANTC 7 cut(s) 406, 421, 454, 607, 1151, 1315, 1368
HpaI GTTAAC 1 cut(s) 1087
HpaII CCGG 3 cut(s) 387, 1328, 1361
HphI GGTGA 7 cut(s) 25, 118, 143, 274, 572, 755, 896
Hpy166II GTNNAC 6 cut(s) 378, 782, 949, 1087, 1174, 1485
Hpy188III TCNNGA 7 cut(s) 387, 425, 535, 908, 1106, 1309, 1372
Hpy8I GTNNAC 6 cut(s) 378, 782, 949, 1087, 1174, 1485
Hpy99I CGWCG 1 cut(s) 690
HpyAV CCTTC 8 cut(s) 97, 164, 661, 667, 784, 935, 1478, 1626
HpyCH4III ACNGT 5 cut(s) 976, 1123, 1293, 1477, 1482
HpyCH4IV ACGT 3 cut(s) 191, 1089, 1140
HpyCH4V TGCA 9 cut(s) 50, 134, 343, 701, 809, 1022, 1217, 1508, 1631
HpyF10VI GCNNNNNNNGC 3 cut(s) 122, 131, 1414
HpyF3I CTNAG 1 cut(s) 1149
HpySE526I ACGT 3 cut(s) 191, 1089, 1140
HspAI GCGC 3 cut(s) 322, 643, 683
Kpn2I TCCGGA 1 cut(s) 386
Ksp22I TGATCA 3 cut(s) 531, 904, 1296
KspAI GTTAAC 1 cut(s) 1087
Kzo9I GATC 6 cut(s) 170, 427, 531, 904, 1002, 1296
LguI GCTCTTC 1 cut(s) 756
LmnI GCTCC 2 cut(s) 197, 516
Lsp1109I GCAGC 4 cut(s) 187, 279, 561, 1229
LweI GCATC 6 cut(s) 582, 688, 736, 877, 955, 1002
MaeI CTAG 5 cut(s) 146, 525, 842, 1262, 1494
MaeII ACGT 3 cut(s) 191, 1089, 1140
MaeIII GTNAC 3 cut(s) 149, 1045, 1144
MalI GATC 6 cut(s) 172, 429, 533, 906, 1004, 1298
MboI GATC 6 cut(s) 170, 427, 531, 904, 1002, 1296
MboII GAAGA 9 cut(s) 309, 550, 689, 743, 752, 811, 857, 1324, 1452
MfeI CAATTG 1 cut(s) 51
MflI RGATCY 1 cut(s) 1002
MhlI GDGCHC 2 cut(s) 1095, 1289
MluCI AATT 5 cut(s) 25, 51, 110, 1241, 1419
MlyI GAGTC 3 cut(s) 415, 601, 1160
MmeI TCCRAC 3 cut(s) 275, 462, 1365
Mph1103I ATGCAT 3 cut(s) 703, 1510, 1633
MroI TCCGGA 1 cut(s) 386
MseI TTAA 2 cut(s) 1052, 1086
MslI CAYNNNNRTG 2 cut(s) 527, 882
MspA1I CMGCKG 2 cut(s) 38, 552
MspI CCGG 3 cut(s) 387, 1328, 1361
MspR9I CCNGG 3 cut(s) 1328, 1329, 1452
MunI CAATTG 1 cut(s) 51
Mva1269I GAATGC 3 cut(s) 293, 701, 1508
MvaI CCWGG 1 cut(s) 1452
MvnI CGCG 3 cut(s) 322, 685, 923
MwoI GCNNNNNNNGC 3 cut(s) 122, 131, 1414
NciI CCSGG 2 cut(s) 1328, 1329
NcoI CCATGG 2 cut(s) 201, 877
NdeII GATC 6 cut(s) 170, 427, 531, 904, 1002, 1296
NlaIV GGNNCC 3 cut(s) 199, 1004, 1233
NmuCI GTSAC 2 cut(s) 149, 1144
NsiI ATGCAT 3 cut(s) 703, 1510, 1633
NspI RCATGY 1 cut(s) 993
NspV TTCGAA 1 cut(s) 1512
PagI TCATGA 1 cut(s) 1371
PciSI GCTCTTC 1 cut(s) 756
PctI GAATGC 3 cut(s) 293, 701, 1508
PfeI GAWTC 4 cut(s) 406, 454, 1315, 1368
PflFI GACNNNGTC 1 cut(s) 1150
PkrI GCNGC 4 cut(s) 177, 269, 551, 1219
PleI GAGTC 3 cut(s) 415, 601, 1159
PpsI GAGTC 3 cut(s) 415, 601, 1159
Psp1406I AACGTT 2 cut(s) 191, 1140
Psp6I CCWGG 1 cut(s) 1450
PspEI GGTNACC 1 cut(s) 149
PspGI CCWGG 1 cut(s) 1450
PspN4I GGNNCC 3 cut(s) 199, 1004, 1233
PspPI GGNCC 4 cut(s) 218, 389, 486, 1338
PsrI GAACNNNNNNTAC 2 cut(s) 465, 497
PstI CTGCAG 2 cut(s) 811, 1219
PstNI CAGNNNCTG 1 cut(s) 769
PsuI RGATCY 1 cut(s) 1002
PsyI GACNNNGTC 1 cut(s) 1150
PvuII CAGCTG 1 cut(s) 552
RsaI GTAC 6 cut(s) 234, 506, 693, 1175, 1258, 1479
RsaNI GTAC 6 cut(s) 233, 505, 692, 1174, 1257, 1478
RseI CAYNNNNRTG 2 cut(s) 527, 882
SapI GCTCTTC 1 cut(s) 756
SaqAI TTAA 2 cut(s) 1052, 1086
SatI GCNGC 4 cut(s) 176, 268, 550, 1218
Sau3AI GATC 6 cut(s) 170, 427, 531, 904, 1002, 1296
Sau96I GGNCC 4 cut(s) 218, 389, 486, 1338
SchI GAGTC 3 cut(s) 415, 601, 1160
ScrFI CCNGG 3 cut(s) 1328, 1329, 1452
SduI GDGCHC 2 cut(s) 1095, 1289
SfaNI GCATC 6 cut(s) 582, 688, 736, 877, 955, 1002
SfcI CTRYAG 3 cut(s) 449, 807, 1215
SfuI TTCGAA 1 cut(s) 1512
SinI GGWCC 4 cut(s) 218, 389, 486, 1338
SmaI CCCGGG 1 cut(s) 1329
SmiMI CAYNNNNRTG 2 cut(s) 527, 882
SmlI CTYRAG 1 cut(s) 1104
SmoI CTYRAG 1 cut(s) 1104
SpeI ACTAGT 1 cut(s) 524
Sse9I AATT 5 cut(s) 25, 51, 110, 1241, 1419
SsiI CCGC 5 cut(s) 36, 442, 737, 1006, 1586
SspMI CTAG 5 cut(s) 146, 525, 842, 1262, 1494
StyD4I CCNGG 3 cut(s) 1326, 1327, 1450
StyI CCWWGG 5 cut(s) 201, 282, 877, 1041, 1281
TaaI ACNGT 5 cut(s) 976, 1123, 1293, 1477, 1482
TaiI ACGT 3 cut(s) 194, 1092, 1143
TaqI TCGA 3 cut(s) 688, 1116, 1512
TasI AATT 5 cut(s) 25, 51, 110, 1241, 1419
TatI WGTACW 3 cut(s) 504, 691, 1173
TfiI GAWTC 4 cut(s) 406, 454, 1315, 1368
Tru1I TTAA 2 cut(s) 1052, 1086
Tru9I TTAA 2 cut(s) 1052, 1086
TscAI CASTG 3 cut(s) 277, 770, 1396
TseFI GTSAC 2 cut(s) 149, 1144
TseI GCWGC 4 cut(s) 175, 267, 549, 1217
Tsp45I GTSAC 2 cut(s) 149, 1144
TspDTI ATGAA 6 cut(s) 347, 812, 904, 1254, 1307, 1360
TspGWI ACGGA 2 cut(s) 557, 1193
TspMI CCCGGG 1 cut(s) 1327
TspRI CASTG 3 cut(s) 277, 770, 1396
Tth111I GACNNNGTC 1 cut(s) 1150
VpaK11BI GGWCC 4 cut(s) 218, 389, 486, 1338
XagI CCTNNNNNAGG 1 cut(s) 144
XapI RAATTY 2 cut(s) 25, 1241
XceI RCATGY 1 cut(s) 993
XmaI CCCGGG 1 cut(s) 1327
XmiI GTMKAC 1 cut(s) 948
XspI CTAG 5 cut(s) 146, 525, 842, 1262, 1494
Zsp2I ATGCAT 3 cut(s) 703, 1510, 1633
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.