Rroxscaffold_7G00168050

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000137
Physical Location & Seq
Reverse (-)
8973189 .. 8975553
2365 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00168050.1

Sequence Viewer

Length: 1602 bp
ATGGAGTTCCCTCTTCAATATCTCAGTTCTTCTCCATCCACCATACTTGGCTTTTTATTGTTTATTCTCTCTTTATTGCTATGGATAACAAAAATTTCCAACAATAACGCAGCCGGTGCATGGCCATTAGTTGGTCACCTTCTCCTCTTAGGCGGCTCACTTCCGCCGCATATAACCTTGGGTAACATGGCTGACAAGTATGGACCACTCTTCACAATCAAACTCGGCGTGCACCGATCTGTTATTGTGAGCAGTTGGGACATGGCCAAAGAGTGTCTAACCACCAACGACAGAGTCTTTGCTAATCGCCCGAAGTTATTAGTCTCAGAGGTTATGGGATACAACTACGCCATGATTGGGTTCAGTCCCTATGGTCCCTACTGGCGCCAGATGCGCAAGGTAGCCATCCTGGAGCTCCTCTCGAACCACCGCTTGGAGAACCTCAGGCACGTTCGTGAATCCGAGGTGAAGGCTTGTACCAAGAACATTTACGATTTGTGGAGGCAAAACAAAAGCTCAGATCATGTGTTGGTGGACATGAAGAGGTGGTTCGGAGACGTAACGATGAACACCATGTTTAGGATGGTTGTAGGGAAGCGGTTCCTACTTAAGGCTAGCTCGGAGCGTGAGAAGGAAGAGAACGAAAGGTGTCGAAAGGCGTTGAGGGAGTTTTTCAGATTGGCCGGTGAGTTTGTGATGGCGGATGCAGTGCCTTTCCTTAGGTGGTTAGATTTGGGCGGACACGAGAAGGCAATGAAGAAGACTGCAAAGGAACTAGATCATGTTCTGGAACGATGGTTGGAAGAGCATAAGCTAAAACGTAGTACTAATTCTACTTCTACTTCGCATGAGCCTGACGATTTCATGGATATGATGCTTTCTGTTCTTGATGATAGTATACTGGAGTTTCGTGGGTACACACTACTGCTGACACCGTCAACAAAGCTACTTGCCTGGTATGTGCATGCTCTTATATTAGGGGGAACAGACACCACAACAGTAACATTAACATGGGCTCTTTCATTACTAGTGAACAACCCTTCAATCTTAAAGAAAGCTCAAAATGAATTAGACACAAAAGTTGGCCGGAATAGACAAGTGAATGAATCGGACGTGAAGAACCTCGTCTATCTCCAAGCCATTATCAAAGAAACCTTGCGCTTATACCCTGCTGTACCACTCCTCGCACCCCACGAATCCACAGAAGACTGCACCGTAGGAAACTACCACGTACCCGCCAAAACACGTCTAATCGTCAATATTTGGAAGCTTCACCGGGATCCGAATGTCTGGCTAGATCCCTGCATTTTCCAGCCTGAAAGGTTCCTTACAAGACATGAGGATTTTGATTTTAGGGGCCAAAATTTTGAGCTCATACCGTTTGGAAGTGGTAGAAGAATATGTCCAGGAATTTCATTGGCACTTCAAGTTATAGAACTCACTCTAGCTCATGTGTTGCATGGGTTTGAAATTACAGCCCCATCAGATGAACCAGTCGATATGAGTGAGACTCTTGGGTTAACAAACATGAAGGCCACACCATTAGAGGTCCTTCTCAGACCACGCCTTCCTGCTGACATTTATGAATACGTCTCGTTATAA

Protein Analysis

533

Amino Acids

60.98

Weight (kDa)

7.7

Isoelectric Point (pI)

44.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 40 - 508 8.4e-95 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1600
Acc16I TGCGCA 1 cut(s) 395
AccB1I GGYRCC 1 cut(s) 384
AccB7I CCANNNNNTGG 2 cut(s) 131, 433
AccI GTMKAC 1 cut(s) 898
AciI CCGC 8 cut(s) 153, 164, 167, 430, 598, 701, 738, 1236
AclWI GGATC 3 cut(s) 1274, 1287, 1292
AcoI YGGCCR 4 cut(s) 122, 264, 681, 1084
AcsI RAATTY 3 cut(s) 93, 1363, 1410
AcyI GRCGYC 1 cut(s) 385
AfaI GTAC 5 cut(s) 478, 826, 917, 1176, 1233
AfiI CCNNNNNNNGG 6 cut(s) 120, 131, 357, 433, 579, 610
AflII CTTAAG 1 cut(s) 608
AflIII ACRYGT 1 cut(s) 1244
AgsI TTSAA 4 cut(s) 17, 1044, 1427, 1469
AhlI ACTAGT 1 cut(s) 1027
AjiI CACGTC 2 cut(s) 1114, 1247
AjnI CCWGG 3 cut(s) 408, 953, 1405
AjuI GAANNNNNNNTTGG 2 cut(s) 416, 448
AleI CACNNNNGTG 1 cut(s) 453
AluBI AGCT 9 cut(s) 415, 516, 618, 814, 946, 1058, 1270, 1372, 1448
AluI AGCT 9 cut(s) 415, 516, 618, 814, 946, 1058, 1270, 1372, 1448
Alw21I GWGCWC 3 cut(s) 234, 417, 1374
Alw26I GTCTC 4 cut(s) 328, 549, 1502, 1597
Alw44I GTGCAC 1 cut(s) 230
AlwI GGATC 3 cut(s) 1274, 1287, 1292
AoxI GGCC 6 cut(s) 122, 264, 681, 1084, 1357, 1533
ApaLI GTGCAC 1 cut(s) 230
ApeKI GCWGC 1 cut(s) 110
ApoI RAATTY 3 cut(s) 93, 1363, 1410
ArsI GACNNNNNNTTYG 2 cut(s) 281, 313
Asp700I GAANNNNTTC 1 cut(s) 599
AspLEI GCGC 3 cut(s) 387, 396, 1161
AspS9I GGNCC 4 cut(s) 203, 374, 1357, 1549
AsuC2I CCSGG 1 cut(s) 1277
AsuHPI GGTGA 4 cut(s) 128, 478, 698, 1265
AsuNHI GCTAGC 1 cut(s) 614
AvaII GGWCC 3 cut(s) 203, 374, 1549
AxyI CCTNAGG 2 cut(s) 443, 719
BaeGI GKGCMC 1 cut(s) 234
BalI TGGCCA 2 cut(s) 124, 266
BamHI GGATCC 1 cut(s) 1279
BanI GGYRCC 1 cut(s) 384
BanII GRGCYC 3 cut(s) 417, 1018, 1374
BauI CACGAG 1 cut(s) 743
BbsI GAAGAC 2 cut(s) 767, 1212
Bbv12I GWGCWC 3 cut(s) 234, 417, 1374
BbvI GCAGC 1 cut(s) 122
BccI CCATC 6 cut(s) 43, 413, 577, 691, 789, 1489
BciT130I CCWGG 3 cut(s) 410, 955, 1407
BciVI GTATCC 1 cut(s) 332
BcnI CCSGG 1 cut(s) 1277
BcoDI GTCTC 4 cut(s) 328, 549, 1502, 1597
BcuI ACTAGT 1 cut(s) 1027
BfaI CTAG 5 cut(s) 615, 776, 1028, 1295, 1445
BfoI RGCGCY 1 cut(s) 388
BfrI CTTAAG 1 cut(s) 608
BfuI GTATCC 1 cut(s) 332
BisI GCNGC 3 cut(s) 111, 154, 167
BlsI GCNGC 3 cut(s) 112, 155, 168
BmcAI AGTACT 1 cut(s) 826
Bme1390I CCNGG 4 cut(s) 410, 955, 1277, 1407
Bme18I GGWCC 3 cut(s) 203, 374, 1549
BmgBI CACGTC 2 cut(s) 1114, 1247
BmgT120I GGNCC 4 cut(s) 203, 374, 1357, 1549
BmiI GGNNCC 6 cut(s) 376, 386, 602, 1281, 1325, 1358
BmrFI CCNGG 4 cut(s) 410, 955, 1277, 1407
BmsI GCATC 3 cut(s) 381, 694, 864
BmtI GCTAGC 1 cut(s) 618
BpiI GAAGAC 2 cut(s) 767, 1212
BplI GAGNNNNNCTC 4 cut(s) 404, 436, 1495, 1527
BpmI CTGGAG 2 cut(s) 431, 923
BpuMI CCSGG 1 cut(s) 1277
BsaAI YACGTR 1 cut(s) 1231
BsaHI GRCGYC 1 cut(s) 385
BsaJI CCNNGG 2 cut(s) 177, 462
Bsc4I CCNNNNNNNGG 6 cut(s) 120, 131, 357, 433, 579, 610
Bse118I RCCGGY 2 cut(s) 113, 683
Bse1I ACTGG 3 cut(s) 386, 906, 1493
Bse21I CCTNAGG 2 cut(s) 443, 719
Bse3DI GCAATG 1 cut(s) 759
BseBI CCWGG 3 cut(s) 410, 955, 1407
BseDI CCNNGG 2 cut(s) 177, 462
BseGI GGATG 4 cut(s) 35, 405, 588, 709
BseLI CCNNNNNNNGG 6 cut(s) 120, 131, 357, 433, 579, 610
BseMI GCAATG 1 cut(s) 759
BseMII CTCAG 5 cut(s) 37, 339, 457, 531, 1570
BseNI ACTGG 3 cut(s) 386, 906, 1493
BseRI GAGGAG 3 cut(s) 134, 407, 1172
BseSI GKGCMC 1 cut(s) 234
BseXI GCAGC 1 cut(s) 122
BsgI GTGCAG 1 cut(s) 1195
BshFI GGCC 6 cut(s) 124, 266, 683, 1086, 1359, 1535
BshNI GGYRCC 1 cut(s) 384
BsiHKAI GWGCWC 3 cut(s) 234, 417, 1374
BsiSI CCGG 4 cut(s) 114, 684, 1087, 1276
BslFI GGGAC 3 cut(s) 272, 351, 360
BslI CCNNNNNNNGG 6 cut(s) 120, 131, 357, 433, 579, 610
BsmAI GTCTC 4 cut(s) 328, 549, 1502, 1597
BsmBI CGTCTC 2 cut(s) 549, 1597
BsmFI GGGAC 3 cut(s) 272, 351, 360
BsnI GGCC 6 cut(s) 124, 266, 683, 1086, 1359, 1535
Bsp1286I GDGCHC 4 cut(s) 234, 417, 1018, 1374
Bsp143I GATC 5 cut(s) 236, 520, 778, 1279, 1297
BspACI CCGC 8 cut(s) 153, 164, 167, 430, 598, 701, 738, 1236
BspANI GGCC 6 cut(s) 124, 266, 683, 1086, 1359, 1535
BspCNI CTCAG 5 cut(s) 36, 338, 456, 530, 1569
BspLI GGNNCC 6 cut(s) 376, 386, 602, 1281, 1325, 1358
BspOI GCTAGC 1 cut(s) 618
BspPI GGATC 3 cut(s) 1274, 1287, 1292
BspQI GCTCTTC 1 cut(s) 798
BspT107I GGYRCC 1 cut(s) 384
BspTI CTTAAG 1 cut(s) 608
BsrDI GCAATG 1 cut(s) 759
BsrFI RCCGGY 2 cut(s) 113, 683
BsrI ACTGG 3 cut(s) 386, 906, 1493
BssAI RCCGGY 2 cut(s) 113, 683
BssECI CCNNGG 2 cut(s) 177, 462
BssMI GATC 5 cut(s) 236, 520, 778, 1279, 1297
BssNAI GTATAC 1 cut(s) 899
BssNI GRCGYC 1 cut(s) 385
BssSI CACGAG 1 cut(s) 743
BssT1I CCWWGG 1 cut(s) 177
Bst1107I GTATAC 1 cut(s) 899
Bst2BI CACGAG 1 cut(s) 743
Bst2UI CCWGG 3 cut(s) 410, 955, 1407
Bst4CI ACNGT 4 cut(s) 936, 1000, 1216, 1380
Bst6I CTCTTC 5 cut(s) 18, 215, 536, 630, 798
BstACI GRCGYC 1 cut(s) 385
BstAFI CTTAAG 1 cut(s) 608
BstAPI GCANNNNNTGC 1 cut(s) 116
BstBAI YACGTR 1 cut(s) 1231
BstC8I GCNNGC 3 cut(s) 230, 616, 966
BstDEI CTNAG 7 cut(s) 23, 148, 325, 443, 517, 719, 1556
BstEII GGTNACC 1 cut(s) 134
BstENI CCTNNNNNAGG 1 cut(s) 608
BstF5I GGATG 4 cut(s) 35, 405, 588, 709
BstH2I RGCGCY 1 cut(s) 388
BstHHI GCGC 3 cut(s) 387, 396, 1161
BstKTI GATC 5 cut(s) 239, 523, 781, 1282, 1300
BstMAI GTCTC 4 cut(s) 328, 549, 1502, 1597
BstMBI GATC 5 cut(s) 236, 520, 778, 1279, 1297
BstMWI GCNNNNNNNGC 3 cut(s) 116, 391, 393
BstNI CCWGG 3 cut(s) 410, 955, 1407
BstNSI RCATGY 1 cut(s) 968
BstPI GGTNACC 1 cut(s) 134
BstSCI CCNGG 4 cut(s) 408, 953, 1275, 1405
BstSLI GKGCMC 1 cut(s) 234
BstV1I GCAGC 1 cut(s) 122
BstV2I GAAGAC 2 cut(s) 767, 1212
BstX2I RGATCY 2 cut(s) 1279, 1297
BstYI RGATCY 2 cut(s) 1279, 1297
BstZ17I GTATAC 1 cut(s) 899
Bsu36I CCTNAGG 2 cut(s) 443, 719
BsuI GTATCC 1 cut(s) 332
BsuRI GGCC 6 cut(s) 124, 266, 683, 1086, 1359, 1535
BtrI CACGTC 2 cut(s) 1114, 1247
BtsCI GGATG 4 cut(s) 35, 405, 588, 709
BtsI GCAGTG 1 cut(s) 714
BtsIMutI CAGTG 1 cut(s) 714
Cac8I GCNNGC 3 cut(s) 230, 616, 966
CfoI GCGC 3 cut(s) 387, 396, 1161
Cfr10I RCCGGY 2 cut(s) 113, 683
Cfr13I GGNCC 4 cut(s) 203, 374, 1357, 1549
Csp6I GTAC 5 cut(s) 477, 825, 916, 1175, 1232
CspCI CAANNNNNGTGG 2 cut(s) 28, 63
CviQI GTAC 5 cut(s) 477, 825, 916, 1175, 1232
DdeI CTNAG 7 cut(s) 23, 148, 325, 443, 517, 719, 1556
DinI GGCGCC 1 cut(s) 386
DpnI GATC 5 cut(s) 238, 522, 780, 1281, 1299
DpnII GATC 5 cut(s) 236, 520, 778, 1279, 1297
EaeI YGGCCR 4 cut(s) 122, 264, 681, 1084
Eam1104I CTCTTC 5 cut(s) 18, 215, 536, 630, 798
EarI CTCTTC 5 cut(s) 18, 215, 536, 630, 798
EciI GGCGGA 3 cut(s) 153, 716, 753
Ecl136II GAGCTC 2 cut(s) 415, 1372
Eco130I CCWWGG 1 cut(s) 177
Eco24I GRGCYC 3 cut(s) 417, 1018, 1374
Eco47I GGWCC 3 cut(s) 203, 374, 1549
Eco53kI GAGCTC 2 cut(s) 415, 1372
Eco81I CCTNAGG 2 cut(s) 443, 719
Eco91I GGTNACC 1 cut(s) 134
EcoICRI GAGCTC 2 cut(s) 415, 1372
EcoNI CCTNNNNNAGG 1 cut(s) 608
EcoO109I RGGNCCY 1 cut(s) 1549
EcoO65I GGTNACC 1 cut(s) 134
EcoRII CCWGG 3 cut(s) 408, 953, 1405
EcoT14I CCWWGG 1 cut(s) 177
EcoT38I GRGCYC 3 cut(s) 417, 1018, 1374
EgeI GGCGCC 1 cut(s) 386
EheI GGCGCC 1 cut(s) 386
ErhI CCWWGG 1 cut(s) 177
Esp3I CGTCTC 2 cut(s) 549, 1597
FaqI GGGAC 3 cut(s) 272, 351, 360
FauI CCCGC 1 cut(s) 1243
FblI GTMKAC 1 cut(s) 898
Fnu4HI GCNGC 3 cut(s) 111, 154, 167
FokI GGATG 4 cut(s) 22, 392, 595, 716
FriOI GRGCYC 3 cut(s) 417, 1018, 1374
Fsp4HI GCNGC 3 cut(s) 111, 154, 167
FspBI CTAG 5 cut(s) 615, 776, 1028, 1295, 1445
FspI TGCGCA 1 cut(s) 395
GlaI GCGC 3 cut(s) 386, 395, 1160
GluI GCNGC 3 cut(s) 111, 154, 167
GsuI CTGGAG 2 cut(s) 431, 923
HaeII RGCGCY 1 cut(s) 388
HaeIII GGCC 6 cut(s) 124, 266, 683, 1086, 1359, 1535
HapII CCGG 4 cut(s) 114, 684, 1087, 1276
HhaI GCGC 3 cut(s) 387, 396, 1161
Hin1I GRCGYC 1 cut(s) 385
Hin6I GCGC 3 cut(s) 385, 394, 1159
HinP1I GCGC 3 cut(s) 385, 394, 1159
HincII GTYRAC 2 cut(s) 939, 1521
HindII GTYRAC 2 cut(s) 939, 1521
HindIII AAGCTT 1 cut(s) 1268
HinfI GANTC 5 cut(s) 294, 458, 1106, 1196, 1510
HpaI GTTAAC 1 cut(s) 1521
HpaII CCGG 4 cut(s) 114, 684, 1087, 1276
HphI GGTGA 4 cut(s) 128, 478, 698, 1265
Hpy166II GTNNAC 7 cut(s) 232, 535, 899, 918, 939, 1033, 1521
Hpy188III TCNNGA 4 cut(s) 421, 455, 788, 887
Hpy8I GTNNAC 7 cut(s) 232, 535, 899, 918, 939, 1033, 1521
HpyAV CCTTC 8 cut(s) 149, 463, 625, 742, 1050, 1525, 1562, 1577
HpyCH4III ACNGT 4 cut(s) 936, 1000, 1216, 1380
HpyCH4IV ACGT 7 cut(s) 450, 558, 820, 1113, 1230, 1246, 1590
HpyCH4V TGCA 8 cut(s) 119, 232, 707, 767, 964, 1212, 1305, 1459
HpyF10VI GCNNNNNNNGC 3 cut(s) 116, 391, 393
HpyF3I CTNAG 7 cut(s) 23, 148, 325, 443, 517, 719, 1556
HpySE526I ACGT 7 cut(s) 450, 558, 820, 1113, 1230, 1246, 1590
Hsp92I GRCGYC 1 cut(s) 385
HspAI GCGC 3 cut(s) 385, 394, 1159
KasI GGCGCC 1 cut(s) 384
KspAI GTTAAC 1 cut(s) 1521
Kzo9I GATC 5 cut(s) 236, 520, 778, 1279, 1297
LguI GCTCTTC 1 cut(s) 798
LmnI GCTCC 3 cut(s) 412, 420, 622
Lsp1109I GCAGC 1 cut(s) 122
LweI GCATC 3 cut(s) 381, 694, 864
MaeI CTAG 5 cut(s) 615, 776, 1028, 1295, 1445
MaeII ACGT 7 cut(s) 450, 558, 820, 1113, 1230, 1246, 1590
MaeIII GTNAC 4 cut(s) 134, 182, 559, 1000
MalI GATC 5 cut(s) 238, 522, 780, 1281, 1299
MboI GATC 5 cut(s) 236, 520, 778, 1279, 1297
MflI RGATCY 2 cut(s) 1279, 1297
MhlI GDGCHC 4 cut(s) 234, 417, 1018, 1374
MlsI TGGCCA 2 cut(s) 124, 266
MluCI AATT 6 cut(s) 93, 829, 1067, 1363, 1410, 1470
MluNI TGGCCA 2 cut(s) 124, 266
Mly113I GGCGCC 1 cut(s) 385
MlyI GAGTC 2 cut(s) 303, 1504
MmeI TCCRAC 2 cut(s) 123, 780
Mox20I TGGCCA 2 cut(s) 124, 266
MroXI GAANNNNTTC 1 cut(s) 599
MscI TGGCCA 2 cut(s) 124, 266
MseI TTAA 4 cut(s) 609, 1007, 1049, 1520
MslI CAYNNNNRTG 3 cut(s) 453, 869, 1009
Msp20I TGGCCA 2 cut(s) 124, 266
MspCI CTTAAG 1 cut(s) 608
MspI CCGG 4 cut(s) 114, 684, 1087, 1276
MspR9I CCNGG 4 cut(s) 410, 955, 1277, 1407
MvaI CCWGG 3 cut(s) 410, 955, 1407
MwoI GCNNNNNNNGC 3 cut(s) 116, 391, 393
NarI GGCGCC 1 cut(s) 385
NciI CCSGG 1 cut(s) 1277
NdeII GATC 5 cut(s) 236, 520, 778, 1279, 1297
NheI GCTAGC 1 cut(s) 614
NlaIV GGNNCC 6 cut(s) 376, 386, 602, 1281, 1325, 1358
NmeAIII GCCGAG 1 cut(s) 204
NmuCI GTSAC 1 cut(s) 134
NsbI TGCGCA 1 cut(s) 395
NspI RCATGY 1 cut(s) 968
OliI CACNNNNGTG 1 cut(s) 453
PaeI GCATGC 1 cut(s) 968
PciSI GCTCTTC 1 cut(s) 798
PcsI WCGNNNNNNNCGW 1 cut(s) 1191
PdmI GAANNNNTTC 1 cut(s) 599
PfeI GAWTC 3 cut(s) 458, 1106, 1196
PflFI GACNNNGTC 2 cut(s) 293, 934
PflMI CCANNNNNTGG 2 cut(s) 131, 433
PfoI TCCNGGA 2 cut(s) 408, 1405
PkrI GCNGC 3 cut(s) 112, 155, 168
PleI GAGTC 2 cut(s) 302, 1504
PluTI GGCGCC 1 cut(s) 388
PpsI GAGTC 2 cut(s) 302, 1504
Ppu21I YACGTR 1 cut(s) 1231
PpuMI RGGWCCY 1 cut(s) 1549
PsiI TTATAA 1 cut(s) 1600
Psp124BI GAGCTC 2 cut(s) 417, 1374
Psp5II RGGWCCY 1 cut(s) 1549
Psp6I CCWGG 3 cut(s) 408, 953, 1405
PspEI GGTNACC 1 cut(s) 134
PspGI CCWGG 3 cut(s) 408, 953, 1405
PspN4I GGNNCC 6 cut(s) 376, 386, 602, 1281, 1325, 1358
PspPI GGNCC 4 cut(s) 203, 374, 1357, 1549
PspPPI RGGWCCY 1 cut(s) 1549
PsuI RGATCY 2 cut(s) 1279, 1297
PsyI GACNNNGTC 2 cut(s) 293, 934
RsaI GTAC 5 cut(s) 478, 826, 917, 1176, 1233
RsaNI GTAC 5 cut(s) 477, 825, 916, 1175, 1232
RseI CAYNNNNRTG 3 cut(s) 453, 869, 1009
SacI GAGCTC 2 cut(s) 417, 1374
SapI GCTCTTC 1 cut(s) 798
SaqAI TTAA 4 cut(s) 609, 1007, 1049, 1520
SatI GCNGC 3 cut(s) 111, 154, 167
Sau3AI GATC 5 cut(s) 236, 520, 778, 1279, 1297
Sau96I GGNCC 4 cut(s) 203, 374, 1357, 1549
ScaI AGTACT 1 cut(s) 826
SchI GAGTC 2 cut(s) 303, 1504
ScrFI CCNGG 4 cut(s) 410, 955, 1277, 1407
SduI GDGCHC 4 cut(s) 234, 417, 1018, 1374
SfaNI GCATC 3 cut(s) 381, 694, 864
SfoI GGCGCC 1 cut(s) 386
SinI GGWCC 3 cut(s) 203, 374, 1549
SmiMI CAYNNNNRTG 3 cut(s) 453, 869, 1009
SmlI CTYRAG 1 cut(s) 608
SmoI CTYRAG 1 cut(s) 608
SpeI ACTAGT 1 cut(s) 1027
SphI GCATGC 1 cut(s) 968
Sse9I AATT 6 cut(s) 93, 829, 1067, 1363, 1410, 1470
SsiI CCGC 8 cut(s) 153, 164, 167, 430, 598, 701, 738, 1236
SspDI GGCGCC 1 cut(s) 384
SspI AATATT 1 cut(s) 1261
SspMI CTAG 5 cut(s) 615, 776, 1028, 1295, 1445
SstI GAGCTC 2 cut(s) 417, 1374
StyD4I CCNGG 4 cut(s) 408, 953, 1275, 1405
StyI CCWWGG 1 cut(s) 177
TaaI ACNGT 4 cut(s) 936, 1000, 1216, 1380
TaiI ACGT 7 cut(s) 453, 561, 823, 1116, 1233, 1249, 1593
TaqI TCGA 3 cut(s) 422, 652, 1497
TasI AATT 6 cut(s) 93, 829, 1067, 1363, 1410, 1470
TatI WGTACW 1 cut(s) 824
TauI GCSGC 2 cut(s) 156, 169
TfiI GAWTC 3 cut(s) 458, 1106, 1196
Tru1I TTAA 4 cut(s) 609, 1007, 1049, 1520
Tru9I TTAA 4 cut(s) 609, 1007, 1049, 1520
TscAI CASTG 1 cut(s) 714
TseFI GTSAC 1 cut(s) 134
TseI GCWGC 1 cut(s) 110
Tsp45I GTSAC 1 cut(s) 134
TspRI CASTG 1 cut(s) 714
Tth111I GACNNNGTC 2 cut(s) 293, 934
Van91I CCANNNNNTGG 2 cut(s) 131, 433
Vha464I CTTAAG 1 cut(s) 608
VneI GTGCAC 1 cut(s) 230
VpaK11BI GGWCC 3 cut(s) 203, 374, 1549
XagI CCTNNNNNAGG 1 cut(s) 608
XapI RAATTY 3 cut(s) 93, 1363, 1410
XceI RCATGY 1 cut(s) 968
XcmI CCANNNNNNNNNTGG 1 cut(s) 580
XmiI GTMKAC 1 cut(s) 898
XmnI GAANNNNTTC 1 cut(s) 599
XspI CTAG 5 cut(s) 615, 776, 1028, 1295, 1445
ZrmI AGTACT 1 cut(s) 826
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.