RLG00000035268

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
63926714 .. 63927573
860 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000035268

Sequence Viewer

Length: 678 bp
ATGTGCTTGTCCTCCCGCCCGAAAATGGTAGTTGTAGATCACATTGGATATAACTACGCAGAGTTTGGGTTTGCACCCTGTGGACCATACTGGCGAGAATTGCGTAAGATTACCACTTTAGAGTTGCTCTCCAACCGCCGGCTCGAGTTGCTCAAACACATTCGAGTCTCGGAGGTGACCACCTTTTTGAAAGAAATGTACAAAACTTGGAGCAGTAGAGCAAATGTAAACAAGGGCTCTAACGGTGACCAAGTGTTGGTGGAGTTAAAACAATGGTTCGAGGACCTCACTTTAAATGTGATTCTTAGGATGGTGGCTGGAAAGCATTACTCTGTTTCTATCAACGAAGAAGAGAAGAACGAAGCACGTGGACATGAGAAAGCCATGAAGAAAATAGGAAAAAAATTGGACGCTATTGTTGGAAAATGGGTGGAAGAGCATAAGCAAAAGAGAGAACTAGAAGGCAATGCGGCTCCTGTTTGTGAAGGGAAGCAAGACTTCATAGACACCATGATATCTATACTTGAGGGTGCGGACCTCGACGGATTTGATGCAGATACTGTCAACAAAGCCACAACCTTGAATATGTTTGCAGGAGGCAGTGATACCACCATGGTAACTTTAACATGGGCAATAGCAGGAGGCAGCGATACCACCATGGTAACTTTAAAGAAATAG

Protein Analysis

226

Amino Acids

25.32

Weight (kDa)

6.97

Isoelectric Point (pI)

33.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 125 - 212 5.2e-08 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 256
AciI CCGC 4 cut(s) 16, 136, 470, 533
AcvI CACGTG 1 cut(s) 368
AdeI CACNNNGTG 1 cut(s) 80
AfaI GTAC 1 cut(s) 200
AfiI CCNNNNNNNGG 3 cut(s) 25, 138, 256
AgsI TTSAA 2 cut(s) 190, 583
Alw26I GTCTC 1 cut(s) 172
AlwNI CAGNNNCTG 1 cut(s) 560
Ama87I CYCGRG 1 cut(s) 143
ApeKI GCWGC 1 cut(s) 645
ArsI GACNNNNNNTTYG 2 cut(s) 169, 201
AspS9I GGNCC 3 cut(s) 83, 283, 535
AsuHPI GGTGA 2 cut(s) 187, 257
AvaI CYCGRG 1 cut(s) 143
AvaII GGWCC 3 cut(s) 83, 283, 535
BanII GRGCYC 1 cut(s) 239
BbrPI CACGTG 1 cut(s) 368
BbvI GCAGC 1 cut(s) 657
BccI CCATC 1 cut(s) 304
BcoDI GTCTC 1 cut(s) 172
BfaI CTAG 1 cut(s) 458
BisI GCNGC 2 cut(s) 471, 646
BlsI GCNGC 2 cut(s) 472, 647
Bme18I GGWCC 3 cut(s) 83, 283, 535
BmeT110I CYCGRG 1 cut(s) 143
BmgT120I GGNCC 3 cut(s) 83, 283, 535
BmiI GGNNCC 1 cut(s) 474
BmsI GCATC 1 cut(s) 541
BplI GAGNNNNNCTC 2 cut(s) 113, 145
BpuEI CTTGAG 1 cut(s) 545
BsaAI YACGTR 1 cut(s) 368
BsaJI CCNNGG 2 cut(s) 612, 657
Bsc4I CCNNNNNNNGG 3 cut(s) 25, 138, 256
Bse118I RCCGGY 1 cut(s) 138
Bse1I ACTGG 1 cut(s) 95
Bse3DI GCAATG 1 cut(s) 472
BseDI CCNNGG 2 cut(s) 612, 657
BseGI GGATG 1 cut(s) 315
BseLI CCNNNNNNNGG 3 cut(s) 25, 138, 256
BseMI GCAATG 1 cut(s) 472
BseNI ACTGG 1 cut(s) 95
BseXI GCAGC 1 cut(s) 657
BsiHKCI CYCGRG 1 cut(s) 143
BsiSI CCGG 1 cut(s) 139
BslI CCNNNNNNNGG 3 cut(s) 25, 138, 256
BsmAI GTCTC 1 cut(s) 172
BsoBI CYCGRG 1 cut(s) 143
Bsp1286I GDGCHC 1 cut(s) 239
Bsp1407I TGTACA 1 cut(s) 198
Bsp143I GATC 1 cut(s) 37
Bsp19I CCATGG 2 cut(s) 612, 657
BspACI CCGC 4 cut(s) 16, 136, 470, 533
BspLI GGNNCC 1 cut(s) 474
BspQI GCTCTTC 1 cut(s) 429
BsrDI GCAATG 1 cut(s) 472
BsrFI RCCGGY 1 cut(s) 138
BsrGI TGTACA 1 cut(s) 198
BsrI ACTGG 1 cut(s) 95
BssAI RCCGGY 1 cut(s) 138
BssECI CCNNGG 2 cut(s) 612, 657
BssMI GATC 1 cut(s) 37
BssT1I CCWWGG 2 cut(s) 612, 657
Bst4CI ACNGT 2 cut(s) 245, 562
Bst6I CTCTTC 2 cut(s) 345, 429
BstAUI TGTACA 1 cut(s) 198
BstBAI YACGTR 1 cut(s) 368
BstC8I GCNNGC 1 cut(s) 140
BstDEI CTNAG 1 cut(s) 305
BstDSI CCRYGG 2 cut(s) 612, 657
BstEII GGTNACC 2 cut(s) 175, 245
BstF5I GGATG 1 cut(s) 315
BstKTI GATC 1 cut(s) 40
BstMAI GTCTC 1 cut(s) 172
BstMBI GATC 1 cut(s) 37
BstMWI GCNNNNNNNGC 2 cut(s) 100, 148
BstPI GGTNACC 2 cut(s) 175, 245
BstV1I GCAGC 1 cut(s) 657
BtgI CCRYGG 2 cut(s) 612, 657
BtsCI GGATG 1 cut(s) 315
BtsI GCAGTG 1 cut(s) 607
BtsIMutI CAGTG 1 cut(s) 607
Cac8I GCNNGC 1 cut(s) 140
CaiI CAGNNNCTG 1 cut(s) 560
Cfr10I RCCGGY 1 cut(s) 138
Cfr13I GGNCC 3 cut(s) 83, 283, 535
CseI GACGC 1 cut(s) 419
Csp6I GTAC 1 cut(s) 199
CviAII CATG 6 cut(s) 374, 385, 511, 613, 627, 658
CviJI RGCY 6 cut(s) 142, 237, 317, 383, 473, 572
CviKI_1 RGCY 6 cut(s) 142, 237, 317, 383, 473, 572
CviQI GTAC 1 cut(s) 199
DdeI CTNAG 1 cut(s) 305
DpnI GATC 1 cut(s) 39
DpnII GATC 1 cut(s) 37
DraI TTTAAA 2 cut(s) 294, 669
DraIII CACNNNGTG 1 cut(s) 80
Eam1104I CTCTTC 2 cut(s) 345, 429
EarI CTCTTC 2 cut(s) 345, 429
Eco130I CCWWGG 2 cut(s) 612, 657
Eco24I GRGCYC 1 cut(s) 239
Eco32I GATATC 1 cut(s) 516
Eco47I GGWCC 3 cut(s) 83, 283, 535
Eco72I CACGTG 1 cut(s) 368
Eco88I CYCGRG 1 cut(s) 143
Eco91I GGTNACC 2 cut(s) 175, 245
EcoO109I RGGNCCY 1 cut(s) 283
EcoO65I GGTNACC 2 cut(s) 175, 245
EcoRV GATATC 1 cut(s) 516
EcoT14I CCWWGG 2 cut(s) 612, 657
EcoT38I GRGCYC 1 cut(s) 239
ErhI CCWWGG 2 cut(s) 612, 657
FaeI CATG 6 cut(s) 377, 388, 514, 616, 630, 661
FalI AAGNNNNNCTT 2 cut(s) 482, 514
FatI CATG 6 cut(s) 373, 384, 510, 612, 626, 657
FauI CCCGC 1 cut(s) 23
Fnu4HI GCNGC 2 cut(s) 471, 646
FokI GGATG 1 cut(s) 322
FriOI GRGCYC 1 cut(s) 239
Fsp4HI GCNGC 2 cut(s) 471, 646
FspBI CTAG 1 cut(s) 458
GluI GCNGC 2 cut(s) 471, 646
HapII CCGG 1 cut(s) 139
HgaI GACGC 1 cut(s) 419
Hin1II CATG 6 cut(s) 377, 388, 514, 616, 630, 661
HincII GTYRAC 1 cut(s) 565
HindII GTYRAC 1 cut(s) 565
HinfI GANTC 2 cut(s) 165, 301
HpaII CCGG 1 cut(s) 139
HphI GGTGA 2 cut(s) 187, 257
Hpy166II GTNNAC 4 cut(s) 83, 229, 371, 565
Hpy188I TCNGA 1 cut(s) 172
Hpy8I GTNNAC 4 cut(s) 83, 229, 371, 565
Hpy99I CGWCG 1 cut(s) 545
HpyAV CCTTC 2 cut(s) 455, 479
HpyCH4III ACNGT 2 cut(s) 245, 562
HpyCH4IV ACGT 1 cut(s) 367
HpyCH4V TGCA 3 cut(s) 74, 554, 593
HpyF10VI GCNNNNNNNGC 2 cut(s) 100, 148
HpyF3I CTNAG 1 cut(s) 305
HpySE526I ACGT 1 cut(s) 367
Hsp92II CATG 6 cut(s) 377, 388, 514, 616, 630, 661
KroI GCCGGC 1 cut(s) 138
KroNI GCCGGC 1 cut(s) 140
Kzo9I GATC 1 cut(s) 37
LguI GCTCTTC 1 cut(s) 429
LmnI GCTCC 2 cut(s) 210, 478
LpnPI CCDG 7 cut(s) 76, 91, 152, 303, 489, 579, 624
Lsp1109I GCAGC 1 cut(s) 657
LweI GCATC 1 cut(s) 541
MaeI CTAG 1 cut(s) 458
MaeII ACGT 1 cut(s) 367
MaeIII GTNAC 4 cut(s) 175, 245, 616, 661
MalI GATC 1 cut(s) 39
MboI GATC 1 cut(s) 37
MboII GAAGA 5 cut(s) 359, 362, 367, 400, 446
MhlI GDGCHC 1 cut(s) 239
MluCI AATT 2 cut(s) 98, 404
MlyI GAGTC 1 cut(s) 174
MmeI TCCRAC 2 cut(s) 156, 400
MnlI CCTC 8 cut(s) 22, 166, 274, 296, 520, 548, 590, 635
MroNI GCCGGC 1 cut(s) 138
MseI TTAA 4 cut(s) 266, 293, 623, 668
MspI CCGG 1 cut(s) 139
MwoI GCNNNNNNNGC 2 cut(s) 100, 148
NaeI GCCGGC 1 cut(s) 140
NcoI CCATGG 2 cut(s) 612, 657
NdeII GATC 1 cut(s) 37
NgoMIV GCCGGC 1 cut(s) 138
NlaIII CATG 6 cut(s) 377, 388, 514, 616, 630, 661
NlaIV GGNNCC 1 cut(s) 474
NmuCI GTSAC 2 cut(s) 175, 245
PaeR7I CTCGAG 1 cut(s) 143
PciSI GCTCTTC 1 cut(s) 429
PdiI GCCGGC 1 cut(s) 140
PfeI GAWTC 1 cut(s) 301
PflMI CCANNNNNTGG 1 cut(s) 256
PkrI GCNGC 2 cut(s) 472, 647
PleI GAGTC 1 cut(s) 173
PmaCI CACGTG 1 cut(s) 368
PmlI CACGTG 1 cut(s) 368
PpsI GAGTC 1 cut(s) 173
Ppu21I YACGTR 1 cut(s) 368
PpuMI RGGWCCY 1 cut(s) 283
Psp5II RGGWCCY 1 cut(s) 283
PspCI CACGTG 1 cut(s) 368
PspEI GGTNACC 2 cut(s) 175, 245
PspN4I GGNNCC 1 cut(s) 474
PspPI GGNCC 3 cut(s) 83, 283, 535
PspPPI RGGWCCY 1 cut(s) 283
PspXI VCTCGAGB 1 cut(s) 143
PstNI CAGNNNCTG 1 cut(s) 560
RsaI GTAC 1 cut(s) 200
RsaNI GTAC 1 cut(s) 199
SapI GCTCTTC 1 cut(s) 429
SaqAI TTAA 4 cut(s) 266, 293, 623, 668
SatI GCNGC 2 cut(s) 471, 646
Sau3AI GATC 1 cut(s) 37
Sau96I GGNCC 3 cut(s) 83, 283, 535
SchI GAGTC 1 cut(s) 174
SduI GDGCHC 1 cut(s) 239
SetI ASST 6 cut(s) 177, 185, 288, 370, 540, 581
SfaNI GCATC 1 cut(s) 541
Sfr274I CTCGAG 1 cut(s) 143
SinI GGWCC 3 cut(s) 83, 283, 535
SlaI CTCGAG 1 cut(s) 143
SmlI CTYRAG 2 cut(s) 143, 524
SmoI CTYRAG 2 cut(s) 143, 524
Sse9I AATT 2 cut(s) 98, 404
SsiI CCGC 4 cut(s) 16, 136, 470, 533
SspMI CTAG 1 cut(s) 458
StyI CCWWGG 2 cut(s) 612, 657
TaaI ACNGT 2 cut(s) 245, 562
TaiI ACGT 1 cut(s) 370
TaqI TCGA 4 cut(s) 144, 163, 279, 540
TasI AATT 2 cut(s) 98, 404
TatI WGTACW 1 cut(s) 198
TauI GCSGC 1 cut(s) 473
TfiI GAWTC 1 cut(s) 301
Tru1I TTAA 4 cut(s) 266, 293, 623, 668
Tru9I TTAA 4 cut(s) 266, 293, 623, 668
TscAI CASTG 1 cut(s) 607
TseFI GTSAC 2 cut(s) 175, 245
TseI GCWGC 1 cut(s) 645
Tsp45I GTSAC 2 cut(s) 175, 245
TspDTI ATGAA 2 cut(s) 401, 490
TspGWI ACGGA 1 cut(s) 558
TspRI CASTG 1 cut(s) 607
Van91I CCANNNNNTGG 1 cut(s) 256
VpaK11BI GGWCC 3 cut(s) 83, 283, 535
XhoI CTCGAG 1 cut(s) 143
XspI CTAG 1 cut(s) 458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.