Rroxscaffold_7G00168060

cytochrome P450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000137
Physical Location & Seq
Reverse (-)
8976423 .. 8978634
2212 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00168060.1

Sequence Viewer

Length: 1602 bp
ATGGATCATCTCCTTGCTTATGTGAACTTATATGTCACGGCGGGATTAATCTTCGCAATAACAATCGTCCTATATTCCTATTATTTTTCGCAGAGAAGGACATGGAGAGCTTCCGCTAAGCGCAGATTAGCACCTCAAGCCAAGGGAGCATGGCCCGTGCTTGGCCACCTTCCGTTGCTAGGAGGATCCACACCTCCCCAAATCATCCTGGGAGCCATGGCTGACAAGTATGGTTCCCTTTTTACTATACGCCTTGGAATCTATCCAACTTTGGTGGTGAGCAGTAGTGAAATGGCTAAGGAATGCTTTACAATCCATGACATGGCTGCGTCCTCGCGCCCCAAAATGGCAGCTGTGGAACTCATTGGATACAACTATGCCATGTTTGGATTTGCACCCTCCGGACCATATTGGCGAGAAGTGCGTAAACTAGCAACCTTGGGGTTGCTCTCCAACCGCCGGATTCAGTTGCTTAAAGACATTCGAGTCTCCGAAGTGACTAGCTTCCTGAAAGAATTGTACAAAACTTGGAGTGCAAGTAGTACTACAGATCATAACCATGTAGCTTTGGTCGAGTTGAAACAATGGTTTGGGGACTTGACTCTTAACGTTATACTTAGTATGGTAGCTGGAAAACGCTACTCGTTCATAAGTGATTCCGCGAATGATGATGAGAAGAAAGAAGCGGGTCGCGTGCAGGATGCAGTGAGGAAGTTATTTTACTTTACTGGGGTGTTTTTGGTGGGTGACTTGGTTCCTTACCTTCGGTGGTTGGATTTAGGTGGTCATGAAAAGGCCATGAAGAAAACTGCAAAAGAAATCGACGCCATTCTCGGGGAGTGGATACAAGAGCATAAGCAAAGGAGAAGAGCAGGTGACACCGGGGAGCATGACTTCATGGACACCATGCTTACTGTGCTTCAAGGTGAAGACCTTGGCGGTTACGATGCGGATACAGTCAACAAAGCCACATGCTTGGATTTGATTTTAGGAGGTAGCGACACCACCATGGCTACATTGACATGGGCAGTATCACTATTATTGAACAATCGTCACGTATTGAAACAAGCTCAAGATGAATTGGATGCAGAAGTCGGCAGAGAAAAAATTGTGAGCGAGTCGGATACAAGCAAGCTGGTGTATATCCAAGCCATAGTGAAAGAAACGCTGCGCTTATACCCTGCAGTACCATTATCAGCACAGCATGAGTTCACGGAGGACTGCACCGTGAATGGCTATCACGTCGAAAAGGGGACCCGCTTGATCACGAACCTTTGGAAGATTCAAACCAATCCACGAATCTGGCCTTACCCATTAGAATTCAAACCGGAGAGATTTCTCACCACTCACATGAACATGGATGTTAGGGGTCAGCATTTTGAGCTAATCCCTTTCGGAAGTGGTAGAAGATCTTGTCCTGGGTTATCGTTTGCTCTTCAGATGGTACAATTTACTTTGGCTAGCTTTTTACATGCATTCGAAATCTCAACACCATCCAATGAGCACGTTGATATGTCTGAGAGTTTTGGACTCACAAATGTTAAGGCCACCCCACTTAAAGTTTTCATCAAACCTCGCTTATGTACTAAACTTTATGAATAA

Protein Analysis

533

Amino Acids

60.08

Weight (kDa)

8.37

Isoelectric Point (pI)

36.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 45 - 509 5.5e-88 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 863
AasI GACNNNNNNGTC 1 cut(s) 485
Acc36I ACCTGC 1 cut(s) 863
AccB7I CCANNNNNTGG 1 cut(s) 322
AccII CGCG 3 cut(s) 337, 662, 693
AccIII TCCGGA 1 cut(s) 401
AciI CCGC 8 cut(s) 41, 114, 457, 660, 686, 939, 950, 1258
AclI AACGTT 1 cut(s) 609
AclWI GGATC 3 cut(s) 12, 180, 193
AcoI YGGCCR 1 cut(s) 163
AcsI RAATTY 1 cut(s) 1319
AcuI CTGAAG 1 cut(s) 1421
AcyI GRCGYC 1 cut(s) 825
AfaI GTAC 5 cut(s) 521, 544, 1188, 1446, 1585
AfiI CCNNNNNNNGG 6 cut(s) 161, 179, 322, 346, 459, 834
AgsI TTSAA 6 cut(s) 580, 923, 1045, 1063, 1286, 1324
AjiI CACGTC 1 cut(s) 1243
AjnI CCWGG 2 cut(s) 207, 1417
AluBI AGCT 9 cut(s) 110, 353, 504, 566, 629, 1070, 1135, 1384, 1464
AluI AGCT 9 cut(s) 110, 353, 504, 566, 629, 1070, 1135, 1384, 1464
Alw21I GWGCWC 1 cut(s) 1506
Alw26I GTCTC 1 cut(s) 493
AlwI GGATC 3 cut(s) 12, 180, 193
Ama87I CYCGRG 1 cut(s) 833
Aor13HI TCCGGA 1 cut(s) 401
AoxI GGCC 5 cut(s) 152, 163, 795, 1304, 1545
ApeKI GCWGC 3 cut(s) 326, 350, 1168
ApoI RAATTY 1 cut(s) 1319
AseI ATTAAT 1 cut(s) 47
AspLEI GCGC 3 cut(s) 123, 339, 1173
AspS9I GGNCC 3 cut(s) 153, 404, 1254
AsuC2I CCSGG 1 cut(s) 883
AsuHPI GGTGA 5 cut(s) 289, 758, 887, 938, 1333
AsuII TTCGAA 1 cut(s) 1479
AsuNHI GCTAGC 1 cut(s) 1460
AvaI CYCGRG 1 cut(s) 833
AvaII GGWCC 2 cut(s) 404, 1254
BalI TGGCCA 1 cut(s) 165
BamHI GGATCC 1 cut(s) 185
BarI GAAGNNNNNNTAC 2 cut(s) 704, 736
BbsI GAAGAC 1 cut(s) 936
Bbv12I GWGCWC 1 cut(s) 1506
BbvI GCAGC 3 cut(s) 313, 362, 1155
BccI CCATC 2 cut(s) 1435, 1501
BceAI ACGGC 1 cut(s) 54
BciT130I CCWGG 2 cut(s) 209, 1419
BciVI GTATCC 4 cut(s) 362, 837, 946, 1117
BclI TGATCA 1 cut(s) 1263
BcnI CCSGG 1 cut(s) 883
BcoDI GTCTC 1 cut(s) 493
BfaI CTAG 4 cut(s) 179, 431, 501, 1461
BfmI CTRYAG 2 cut(s) 546, 1182
BfuAI ACCTGC 1 cut(s) 863
BfuI GTATCC 4 cut(s) 362, 837, 946, 1117
BglII AGATCT 1 cut(s) 1409
BisI GCNGC 3 cut(s) 327, 351, 1169
BlpI GCTNAGC 1 cut(s) 117
BlsI GCNGC 3 cut(s) 328, 352, 1170
BmcAI AGTACT 1 cut(s) 544
Bme1390I CCNGG 3 cut(s) 209, 883, 1419
Bme18I GGWCC 2 cut(s) 404, 1254
BmeT110I CYCGRG 1 cut(s) 833
BmgBI CACGTC 1 cut(s) 1243
BmgT120I GGNCC 3 cut(s) 153, 404, 1254
BmiI GGNNCC 6 cut(s) 187, 214, 235, 756, 1255, 1256
BmrFI CCNGG 3 cut(s) 209, 883, 1419
BmrI ACTGGG 1 cut(s) 738
BmsI GCATC 3 cut(s) 691, 937, 1075
BmtI GCTAGC 1 cut(s) 1464
BmuI ACTGGG 1 cut(s) 738
BpiI GAAGAC 1 cut(s) 936
Bpu10I CCTNAGC 1 cut(s) 297
Bpu1102I GCTNAGC 1 cut(s) 117
Bpu14I TTCGAA 1 cut(s) 1479
BpuEI CTTGAG 2 cut(s) 120, 1056
BpuMI CCSGG 1 cut(s) 883
BsaAI YACGTR 1 cut(s) 1057
BsaHI GRCGYC 1 cut(s) 825
BsaJI CCNNGG 9 cut(s) 141, 208, 216, 253, 438, 882, 934, 1008, 1418
BsaWI WCCGGW 2 cut(s) 401, 1327
BsaXI ACNNNNNCTCC 2 cut(s) 523, 553
Bsc4I CCNNNNNNNGG 6 cut(s) 161, 179, 322, 346, 459, 834
Bse1I ACTGG 1 cut(s) 733
BseAI TCCGGA 1 cut(s) 401
BseBI CCWGG 2 cut(s) 209, 1419
BseDI CCNNGG 9 cut(s) 141, 208, 216, 253, 438, 882, 934, 1008, 1418
BseGI GGATG 5 cut(s) 204, 706, 1090, 1366, 1493
BseLI CCNNNNNNNGG 6 cut(s) 161, 179, 322, 346, 459, 834
BseMII CTCAG 1 cut(s) 1509
BseNI ACTGG 1 cut(s) 733
BseXI GCAGC 3 cut(s) 313, 362, 1155
BsgI GTGCAG 2 cut(s) 716, 1207
Bsh1236I CGCG 3 cut(s) 337, 662, 693
BshFI GGCC 5 cut(s) 154, 165, 797, 1306, 1547
BsiHKAI GWGCWC 1 cut(s) 1506
BsiHKCI CYCGRG 1 cut(s) 833
BsiSI CCGG 4 cut(s) 402, 460, 882, 1328
BslFI GGGAC 2 cut(s) 608, 1267
BslI CCNNNNNNNGG 6 cut(s) 161, 179, 322, 346, 459, 834
BsmAI GTCTC 1 cut(s) 493
BsmFI GGGAC 2 cut(s) 608, 1267
BsmI GAATGC 2 cut(s) 308, 1475
BsnI GGCC 5 cut(s) 154, 165, 797, 1306, 1547
BsoBI CYCGRG 1 cut(s) 833
Bsp119I TTCGAA 1 cut(s) 1479
Bsp1286I GDGCHC 1 cut(s) 1506
Bsp13I TCCGGA 1 cut(s) 401
Bsp1407I TGTACA 1 cut(s) 519
Bsp143I GATC 5 cut(s) 4, 185, 550, 1263, 1409
Bsp1720I GCTNAGC 1 cut(s) 117
Bsp19I CCATGG 2 cut(s) 216, 1008
BspACI CCGC 8 cut(s) 41, 114, 457, 660, 686, 939, 950, 1258
BspANI GGCC 5 cut(s) 154, 165, 797, 1306, 1547
BspCNI CTCAG 1 cut(s) 1510
BspEI TCCGGA 1 cut(s) 401
BspFNI CGCG 3 cut(s) 337, 662, 693
BspHI TCATGA 1 cut(s) 787
BspLI GGNNCC 6 cut(s) 187, 214, 235, 756, 1255, 1256
BspMAI CTGCAG 1 cut(s) 1186
BspMI ACCTGC 1 cut(s) 863
BspOI GCTAGC 1 cut(s) 1464
BspPI GGATC 3 cut(s) 12, 180, 193
BspQI GCTCTTC 2 cut(s) 862, 1440
BspT104I TTCGAA 1 cut(s) 1479
BsrGI TGTACA 1 cut(s) 519
BsrI ACTGG 1 cut(s) 733
BssECI CCNNGG 9 cut(s) 141, 208, 216, 253, 438, 882, 934, 1008, 1418
BssMI GATC 5 cut(s) 4, 185, 550, 1263, 1409
BssNI GRCGYC 1 cut(s) 825
BssT1I CCWWGG 6 cut(s) 141, 216, 253, 438, 934, 1008
Bst2UI CCWGG 2 cut(s) 209, 1419
Bst4CI ACNGT 3 cut(s) 916, 958, 1228
Bst6I CTCTTC 2 cut(s) 862, 1440
BstACI GRCGYC 1 cut(s) 825
BstAUI TGTACA 1 cut(s) 519
BstBAI YACGTR 1 cut(s) 1057
BstBI TTCGAA 1 cut(s) 1479
BstC8I GCNNGC 3 cut(s) 695, 1133, 1462
BstDEI CTNAG 4 cut(s) 117, 297, 617, 1518
BstDSI CCRYGG 2 cut(s) 216, 1008
BstF5I GGATG 5 cut(s) 204, 706, 1090, 1366, 1493
BstFNI CGCG 3 cut(s) 337, 662, 693
BstHHI GCGC 3 cut(s) 123, 339, 1173
BstKTI GATC 5 cut(s) 7, 188, 553, 1266, 1412
BstMAI GTCTC 1 cut(s) 493
BstMBI GATC 5 cut(s) 4, 185, 550, 1263, 1409
BstMWI GCNNNNNNNGC 5 cut(s) 137, 146, 421, 916, 1381
BstNI CCWGG 2 cut(s) 209, 1419
BstNSI RCATGY 2 cut(s) 975, 1475
BstSCI CCNGG 3 cut(s) 207, 881, 1417
BstSFI CTRYAG 2 cut(s) 546, 1182
BstUI CGCG 3 cut(s) 337, 662, 693
BstV1I GCAGC 3 cut(s) 313, 362, 1155
BstV2I GAAGAC 1 cut(s) 936
BstX2I RGATCY 2 cut(s) 185, 1409
BstXI CCANNNNNNTGG 2 cut(s) 976, 1302
BstYI RGATCY 2 cut(s) 185, 1409
BsuI GTATCC 4 cut(s) 362, 837, 946, 1117
BsuRI GGCC 5 cut(s) 154, 165, 797, 1306, 1547
BtgI CCRYGG 2 cut(s) 216, 1008
BtrI CACGTC 1 cut(s) 1243
BtsCI GGATG 5 cut(s) 204, 706, 1090, 1366, 1493
BtsI GCAGTG 1 cut(s) 711
BtsIMutI CAGTG 1 cut(s) 711
BveI ACCTGC 1 cut(s) 863
Cac8I GCNNGC 3 cut(s) 695, 1133, 1462
CciI TCATGA 1 cut(s) 787
CfoI GCGC 3 cut(s) 123, 339, 1173
Cfr13I GGNCC 3 cut(s) 153, 404, 1254
CseI GACGC 2 cut(s) 318, 833
Csp6I GTAC 5 cut(s) 520, 543, 1187, 1445, 1584
CspCI CAANNNNNGTGG 2 cut(s) 255, 290
CviQI GTAC 5 cut(s) 520, 543, 1187, 1445, 1584
DdeI CTNAG 4 cut(s) 117, 297, 617, 1518
DpnI GATC 5 cut(s) 6, 187, 552, 1265, 1411
DpnII GATC 5 cut(s) 4, 185, 550, 1263, 1409
DrdI GACNNNNNNGTC 1 cut(s) 485
DseDI GACNNNNNNGTC 1 cut(s) 485
EaeI YGGCCR 1 cut(s) 163
Eam1104I CTCTTC 2 cut(s) 862, 1440
EarI CTCTTC 2 cut(s) 862, 1440
Eco130I CCWWGG 6 cut(s) 141, 216, 253, 438, 934, 1008
Eco47I GGWCC 2 cut(s) 404, 1254
Eco57I CTGAAG 1 cut(s) 1421
Eco88I CYCGRG 1 cut(s) 833
EcoO109I RGGNCCY 1 cut(s) 1254
EcoRI GAATTC 1 cut(s) 1319
EcoRII CCWGG 2 cut(s) 207, 1417
EcoT14I CCWWGG 6 cut(s) 141, 216, 253, 438, 934, 1008
EcoT22I ATGCAT 1 cut(s) 1477
ErhI CCWWGG 6 cut(s) 141, 216, 253, 438, 934, 1008
FalI AAGNNNNNCTT 2 cut(s) 290, 322
FaqI GGGAC 2 cut(s) 608, 1267
FauI CCCGC 3 cut(s) 34, 679, 1265
FbaI TGATCA 1 cut(s) 1263
Fnu4HI GCNGC 3 cut(s) 327, 351, 1169
FokI GGATG 5 cut(s) 191, 713, 1097, 1373, 1480
Fsp4HI GCNGC 3 cut(s) 327, 351, 1169
FspBI CTAG 4 cut(s) 179, 431, 501, 1461
GlaI GCGC 3 cut(s) 122, 338, 1172
GluI GCNGC 3 cut(s) 327, 351, 1169
HaeIII GGCC 5 cut(s) 154, 165, 797, 1306, 1547
HapII CCGG 4 cut(s) 402, 460, 882, 1328
HgaI GACGC 2 cut(s) 318, 833
HhaI GCGC 3 cut(s) 123, 339, 1173
Hin1I GRCGYC 1 cut(s) 825
Hin6I GCGC 3 cut(s) 121, 337, 1171
HinP1I GCGC 3 cut(s) 121, 337, 1171
HincII GTYRAC 1 cut(s) 961
HindII GTYRAC 1 cut(s) 961
HinfI GANTC 9 cut(s) 258, 463, 486, 601, 656, 1118, 1282, 1299, 1530
HpaII CCGG 4 cut(s) 402, 460, 882, 1328
HphI GGTGA 5 cut(s) 289, 758, 887, 938, 1333
Hpy166II GTNNAC 4 cut(s) 25, 428, 961, 1212
Hpy188I TCNGA 5 cut(s) 493, 1123, 1397, 1440, 1519
Hpy188III TCNNGA 5 cut(s) 402, 508, 788, 1073, 1267
Hpy8I GTNNAC 4 cut(s) 25, 428, 961, 1212
Hpy99I CGWCG 2 cut(s) 827, 1247
HpyAV CCTTC 3 cut(s) 90, 179, 773
HpyCH4III ACNGT 3 cut(s) 916, 958, 1228
HpyCH4IV ACGT 4 cut(s) 609, 1056, 1242, 1506
HpyCH4V TGCA 9 cut(s) 395, 536, 697, 704, 812, 1088, 1184, 1224, 1475
HpyF10VI GCNNNNNNNGC 5 cut(s) 137, 146, 421, 916, 1381
HpyF3I CTNAG 4 cut(s) 117, 297, 617, 1518
HpySE526I ACGT 4 cut(s) 609, 1056, 1242, 1506
Hsp92I GRCGYC 1 cut(s) 825
HspAI GCGC 3 cut(s) 121, 337, 1171
KflI GGGWCCC 1 cut(s) 1254
Kpn2I TCCGGA 1 cut(s) 401
Ksp22I TGATCA 1 cut(s) 1263
Kzo9I GATC 5 cut(s) 4, 185, 550, 1263, 1409
LguI GCTCTTC 2 cut(s) 862, 1440
LmnI GCTCC 3 cut(s) 146, 212, 886
Lsp1109I GCAGC 3 cut(s) 313, 362, 1155
LweI GCATC 3 cut(s) 691, 937, 1075
MaeI CTAG 4 cut(s) 179, 431, 501, 1461
MaeII ACGT 4 cut(s) 609, 1056, 1242, 1506
MaeIII GTNAC 6 cut(s) 34, 496, 746, 875, 941, 1052
MalI GATC 5 cut(s) 6, 187, 552, 1265, 1411
MboI GATC 5 cut(s) 4, 185, 550, 1263, 1409
MboII GAAGA 8 cut(s) 43, 688, 814, 879, 941, 1291, 1419, 1427
MflI RGATCY 2 cut(s) 185, 1409
MhlI GDGCHC 1 cut(s) 1506
MlsI TGGCCA 1 cut(s) 165
MluCI AATT 5 cut(s) 515, 1079, 1107, 1319, 1448
MluNI TGGCCA 1 cut(s) 165
MlyI GAGTC 4 cut(s) 495, 595, 1127, 1524
MmeI TCCRAC 4 cut(s) 290, 477, 753, 1101
MnlI CCTC 9 cut(s) 144, 176, 204, 343, 409, 702, 986, 1210, 1584
Mox20I TGGCCA 1 cut(s) 165
Mph1103I ATGCAT 1 cut(s) 1477
MroI TCCGGA 1 cut(s) 401
MscI TGGCCA 1 cut(s) 165
MseI TTAA 5 cut(s) 47, 474, 606, 1542, 1557
MslI CAYNNNNRTG 5 cut(s) 558, 1007, 1021, 1349, 1355
Msp20I TGGCCA 1 cut(s) 165
MspA1I CMGCKG 1 cut(s) 353
MspI CCGG 4 cut(s) 402, 460, 882, 1328
MspR9I CCNGG 3 cut(s) 209, 883, 1419
Mva1269I GAATGC 2 cut(s) 308, 1475
MvaI CCWGG 2 cut(s) 209, 1419
MvnI CGCG 3 cut(s) 337, 662, 693
MwoI GCNNNNNNNGC 5 cut(s) 137, 146, 421, 916, 1381
NciI CCSGG 1 cut(s) 883
NcoI CCATGG 2 cut(s) 216, 1008
NdeII GATC 5 cut(s) 4, 185, 550, 1263, 1409
NheI GCTAGC 1 cut(s) 1460
NlaIV GGNNCC 6 cut(s) 187, 214, 235, 756, 1255, 1256
NmuCI GTSAC 5 cut(s) 34, 496, 746, 875, 1052
NsiI ATGCAT 1 cut(s) 1477
NspI RCATGY 2 cut(s) 975, 1475
NspV TTCGAA 1 cut(s) 1479
PagI TCATGA 1 cut(s) 787
PaqCI CACCTGC 1 cut(s) 863
PciSI GCTCTTC 2 cut(s) 862, 1440
PctI GAATGC 2 cut(s) 308, 1475
PfeI GAWTC 5 cut(s) 258, 463, 656, 1282, 1299
PflMI CCANNNNNTGG 1 cut(s) 322
PkrI GCNGC 3 cut(s) 328, 352, 1170
PleI GAGTC 4 cut(s) 494, 595, 1126, 1524
PpsI GAGTC 4 cut(s) 494, 595, 1126, 1524
Ppu21I YACGTR 1 cut(s) 1057
PpuMI RGGWCCY 1 cut(s) 1254
PshBI ATTAAT 1 cut(s) 47
Psp1406I AACGTT 1 cut(s) 609
Psp5II RGGWCCY 1 cut(s) 1254
Psp6I CCWGG 2 cut(s) 207, 1417
PspGI CCWGG 2 cut(s) 207, 1417
PspN4I GGNNCC 6 cut(s) 187, 214, 235, 756, 1255, 1256
PspPI GGNCC 3 cut(s) 153, 404, 1254
PspPPI RGGWCCY 1 cut(s) 1254
PstI CTGCAG 1 cut(s) 1186
PsuI RGATCY 2 cut(s) 185, 1409
PvuII CAGCTG 1 cut(s) 353
RsaI GTAC 5 cut(s) 521, 544, 1188, 1446, 1585
RsaNI GTAC 5 cut(s) 520, 543, 1187, 1445, 1584
RseI CAYNNNNRTG 5 cut(s) 558, 1007, 1021, 1349, 1355
SapI GCTCTTC 2 cut(s) 862, 1440
SaqAI TTAA 5 cut(s) 47, 474, 606, 1542, 1557
SatI GCNGC 3 cut(s) 327, 351, 1169
Sau3AI GATC 5 cut(s) 4, 185, 550, 1263, 1409
Sau96I GGNCC 3 cut(s) 153, 404, 1254
ScaI AGTACT 1 cut(s) 544
SchI GAGTC 4 cut(s) 495, 595, 1127, 1524
ScrFI CCNGG 3 cut(s) 209, 883, 1419
SduI GDGCHC 1 cut(s) 1506
SfaNI GCATC 3 cut(s) 691, 937, 1075
SfcI CTRYAG 2 cut(s) 546, 1182
SfuI TTCGAA 1 cut(s) 1479
SinI GGWCC 2 cut(s) 404, 1254
SmiMI CAYNNNNRTG 5 cut(s) 558, 1007, 1021, 1349, 1355
SmlI CTYRAG 2 cut(s) 135, 1071
SmoI CTYRAG 2 cut(s) 135, 1071
Sse9I AATT 5 cut(s) 515, 1079, 1107, 1319, 1448
SsiI CCGC 8 cut(s) 41, 114, 457, 660, 686, 939, 950, 1258
SspMI CTAG 4 cut(s) 179, 431, 501, 1461
StyD4I CCNGG 3 cut(s) 207, 881, 1417
StyI CCWWGG 6 cut(s) 141, 216, 253, 438, 934, 1008
TaaI ACNGT 3 cut(s) 916, 958, 1228
TaiI ACGT 4 cut(s) 612, 1059, 1245, 1509
TaqI TCGA 5 cut(s) 484, 573, 822, 1245, 1479
TasI AATT 5 cut(s) 515, 1079, 1107, 1319, 1448
TatI WGTACW 3 cut(s) 519, 542, 1583
TfiI GAWTC 5 cut(s) 258, 463, 656, 1282, 1299
Tru1I TTAA 5 cut(s) 47, 474, 606, 1542, 1557
Tru9I TTAA 5 cut(s) 47, 474, 606, 1542, 1557
TscAI CASTG 1 cut(s) 711
TseFI GTSAC 5 cut(s) 34, 496, 746, 875, 1052
TseI GCWGC 3 cut(s) 326, 350, 1168
Tsp45I GTSAC 5 cut(s) 34, 496, 746, 875, 1052
TspDTI ATGAA 7 cut(s) 637, 804, 815, 886, 1092, 1367, 1555
TspGWI ACGGA 2 cut(s) 162, 1229
TspRI CASTG 1 cut(s) 711
Van91I CCANNNNNTGG 1 cut(s) 322
VpaK11BI GGWCC 2 cut(s) 404, 1254
VspI ATTAAT 1 cut(s) 47
XapI RAATTY 1 cut(s) 1319
XceI RCATGY 2 cut(s) 975, 1475
XspI CTAG 4 cut(s) 179, 431, 501, 1461
ZrmI AGTACT 1 cut(s) 544
Zsp2I ATGCAT 1 cut(s) 1477
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.