RchiOBHm_Chr7g0223411

cytochrome P450

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
45120772 .. 45123041
2270 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20002

Sequence Viewer

Length: 369 bp
ATGAATTTTCTCATTCCCTATATCATAGTTGCATTGCCTGTAATAGTAACTATTTCCTATTGCTTGCTCTCAAGGAATTGGAGAGTTTCCAAGGGCGTAACAGCTCCTGAAGCCAATGGTGCATGGCCTATATTTGGTCACCTTCCCTTGTTAGGAGGGTCGACCAAGCCTCTTCACGGAACCTTAGGAGCCATGGCTGACAAGTACGGACCCCTTTTCACCGTCCGACTTGGGATCCATCAATCTTTGGTGGTGAACAGTAGTGAGATGGCTAAGGAGTGCTTTACGATCAAAGACACGTGTACCCTCAATCCCCGGAATAGAACGATCCCTATTTACTATATACTAACGATGACATTTCAGGGTTAA

Protein Analysis

122

Amino Acids

13.45

Weight (kDa)

9.37

Isoelectric Point (pI)

26.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 40 - 96 3.8e-07 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 161
AclWI GGATC 3 cut(s) 229, 242, 322
AcsI RAATTY 1 cut(s) 4
AcuI CTGAAG 1 cut(s) 129
AcvI CACGTG 1 cut(s) 300
AfaI GTAC 2 cut(s) 206, 304
AfiI CCNNNNNNNGG 3 cut(s) 134, 152, 176
AflIII ACRYGT 2 cut(s) 297, 299
AluBI AGCT 1 cut(s) 104
AluI AGCT 1 cut(s) 104
AlwI GGATC 3 cut(s) 229, 242, 322
AlwNI CAGNNNCTG 1 cut(s) 107
AoxI GGCC 1 cut(s) 125
ApoI RAATTY 1 cut(s) 4
AspS9I GGNCC 1 cut(s) 209
AsuC2I CCSGG 1 cut(s) 316
AsuHPI GGTGA 3 cut(s) 131, 211, 265
AvaII GGWCC 1 cut(s) 209
AxyI CCTNAGG 1 cut(s) 184
BaeI ACNNNNGTAYC 2 cut(s) 286, 319
BamHI GGATCC 1 cut(s) 234
BbrPI CACGTG 1 cut(s) 300
BccI CCATC 2 cut(s) 246, 262
BcnI CCSGG 1 cut(s) 316
Bme1390I CCNGG 1 cut(s) 316
Bme18I GGWCC 1 cut(s) 209
BmgT120I GGNCC 1 cut(s) 209
BmiI GGNNCC 4 cut(s) 181, 190, 211, 236
BmrFI CCNGG 1 cut(s) 316
Bpu10I CCTNAGC 1 cut(s) 273
BpuEI CTTGAG 1 cut(s) 55
BpuMI CCSGG 1 cut(s) 316
BsaAI YACGTR 1 cut(s) 300
BsaJI CCNNGG 3 cut(s) 90, 192, 314
Bsc4I CCNNNNNNNGG 3 cut(s) 134, 152, 176
Bse21I CCTNAGG 1 cut(s) 184
Bse3DI GCAATG 1 cut(s) 32
BseDI CCNNGG 3 cut(s) 90, 192, 314
BseLI CCNNNNNNNGG 3 cut(s) 134, 152, 176
BseMI GCAATG 1 cut(s) 32
BshFI GGCC 1 cut(s) 127
BsiSI CCGG 1 cut(s) 316
BslI CCNNNNNNNGG 3 cut(s) 134, 152, 176
BsnI GGCC 1 cut(s) 127
Bsp143I GATC 3 cut(s) 234, 288, 327
Bsp19I CCATGG 1 cut(s) 192
BspANI GGCC 1 cut(s) 127
BspLI GGNNCC 4 cut(s) 181, 190, 211, 236
BspPI GGATC 3 cut(s) 229, 242, 322
BsrDI GCAATG 1 cut(s) 32
BssECI CCNNGG 3 cut(s) 90, 192, 314
BssMI GATC 3 cut(s) 234, 288, 327
BssT1I CCWWGG 2 cut(s) 90, 192
Bst4CI ACNGT 2 cut(s) 223, 260
Bst6I CTCTTC 1 cut(s) 177
BstBAI YACGTR 1 cut(s) 300
BstC8I GCNNGC 1 cut(s) 65
BstDEI CTNAG 2 cut(s) 184, 273
BstDSI CCRYGG 1 cut(s) 192
BstEII GGTNACC 1 cut(s) 137
BstKTI GATC 3 cut(s) 237, 291, 330
BstMBI GATC 3 cut(s) 234, 288, 327
BstMWI GCNNNNNNNGC 2 cut(s) 110, 119
BstPI GGTNACC 1 cut(s) 137
BstSCI CCNGG 1 cut(s) 314
BstX2I RGATCY 1 cut(s) 234
BstYI RGATCY 1 cut(s) 234
Bsu36I CCTNAGG 1 cut(s) 184
BsuRI GGCC 1 cut(s) 127
BtgI CCRYGG 1 cut(s) 192
Cac8I GCNNGC 1 cut(s) 65
CaiI CAGNNNCTG 1 cut(s) 107
Cfr13I GGNCC 1 cut(s) 209
Csp6I GTAC 2 cut(s) 205, 303
CviAII CATG 2 cut(s) 123, 193
CviJI RGCY 7 cut(s) 104, 113, 127, 169, 191, 197, 272
CviKI_1 RGCY 7 cut(s) 104, 113, 127, 169, 191, 197, 272
CviQI GTAC 2 cut(s) 205, 303
DdeI CTNAG 2 cut(s) 184, 273
DpnI GATC 3 cut(s) 236, 290, 329
DpnII GATC 3 cut(s) 234, 288, 327
Eam1104I CTCTTC 1 cut(s) 177
EarI CTCTTC 1 cut(s) 177
Eco130I CCWWGG 2 cut(s) 90, 192
Eco47I GGWCC 1 cut(s) 209
Eco57I CTGAAG 1 cut(s) 129
Eco72I CACGTG 1 cut(s) 300
Eco81I CCTNAGG 1 cut(s) 184
Eco91I GGTNACC 1 cut(s) 137
EcoO65I GGTNACC 1 cut(s) 137
EcoT14I CCWWGG 2 cut(s) 90, 192
ErhI CCWWGG 2 cut(s) 90, 192
FaeI CATG 2 cut(s) 126, 196
FaiI YATR 7 cut(s) 21, 26, 124, 131, 194, 342, 344
FalI AAGNNNNNCTT 2 cut(s) 266, 298
FatI CATG 2 cut(s) 122, 192
FblI GTMKAC 1 cut(s) 161
HaeIII GGCC 1 cut(s) 127
HapII CCGG 1 cut(s) 316
Hin1II CATG 2 cut(s) 126, 196
HincII GTYRAC 1 cut(s) 162
HindII GTYRAC 1 cut(s) 162
HpaII CCGG 1 cut(s) 316
HphI GGTGA 3 cut(s) 131, 211, 265
Hpy166II GTNNAC 3 cut(s) 162, 256, 303
Hpy188I TCNGA 1 cut(s) 227
Hpy188III TCNNGA 1 cut(s) 107
Hpy8I GTNNAC 3 cut(s) 162, 256, 303
HpyAV CCTTC 1 cut(s) 152
HpyCH4III ACNGT 2 cut(s) 223, 260
HpyCH4IV ACGT 1 cut(s) 299
HpyCH4V TGCA 2 cut(s) 32, 122
HpyF10VI GCNNNNNNNGC 2 cut(s) 110, 119
HpyF3I CTNAG 2 cut(s) 184, 273
HpySE526I ACGT 1 cut(s) 299
Hsp92II CATG 2 cut(s) 126, 196
Kzo9I GATC 3 cut(s) 234, 288, 327
LmnI GCTCC 2 cut(s) 109, 188
LpnPI CCDG 4 cut(s) 51, 120, 329, 347
MaeII ACGT 1 cut(s) 299
MaeIII GTNAC 3 cut(s) 46, 97, 137
MalI GATC 3 cut(s) 236, 290, 329
MboI GATC 3 cut(s) 234, 288, 327
MboII GAAGA 1 cut(s) 164
MflI RGATCY 1 cut(s) 234
MluCI AATT 2 cut(s) 4, 76
MmeI TCCRAC 1 cut(s) 250
MnlI CCTC 3 cut(s) 149, 180, 317
MseI TTAA 1 cut(s) 367
MspI CCGG 1 cut(s) 316
MspR9I CCNGG 1 cut(s) 316
MwoI GCNNNNNNNGC 2 cut(s) 110, 119
NciI CCSGG 1 cut(s) 316
NcoI CCATGG 1 cut(s) 192
NdeII GATC 3 cut(s) 234, 288, 327
NlaIII CATG 2 cut(s) 126, 196
NlaIV GGNNCC 4 cut(s) 181, 190, 211, 236
NmuCI GTSAC 1 cut(s) 137
PmaCI CACGTG 1 cut(s) 300
PmlI CACGTG 1 cut(s) 300
Ppu21I YACGTR 1 cut(s) 300
PspCI CACGTG 1 cut(s) 300
PspEI GGTNACC 1 cut(s) 137
PspN4I GGNNCC 4 cut(s) 181, 190, 211, 236
PspPI GGNCC 1 cut(s) 209
PstNI CAGNNNCTG 1 cut(s) 107
PsuI RGATCY 1 cut(s) 234
RsaI GTAC 2 cut(s) 206, 304
RsaNI GTAC 2 cut(s) 205, 303
SalI GTCGAC 1 cut(s) 160
SaqAI TTAA 1 cut(s) 367
Sau3AI GATC 3 cut(s) 234, 288, 327
Sau96I GGNCC 1 cut(s) 209
ScrFI CCNGG 1 cut(s) 316
SetI ASST 4 cut(s) 106, 144, 185, 302
SinI GGWCC 1 cut(s) 209
SmlI CTYRAG 1 cut(s) 70
SmoI CTYRAG 1 cut(s) 70
Sse9I AATT 2 cut(s) 4, 76
StyD4I CCNGG 1 cut(s) 314
StyI CCWWGG 2 cut(s) 90, 192
TaaI ACNGT 2 cut(s) 223, 260
TaiI ACGT 1 cut(s) 302
TaqI TCGA 1 cut(s) 161
TasI AATT 2 cut(s) 4, 76
Tru1I TTAA 1 cut(s) 367
Tru9I TTAA 1 cut(s) 367
TseFI GTSAC 1 cut(s) 137
Tsp45I GTSAC 1 cut(s) 137
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 2 cut(s) 192, 222
VpaK11BI GGWCC 1 cut(s) 209
XapI RAATTY 1 cut(s) 4
XmiI GTMKAC 1 cut(s) 161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.