Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000137

Physical Location & Seq

Genomic Coordinates Reverse (-)

63648542 .. 63650244

Gene Structure 1703 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G036260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGGATTTTCTCATTCCCTATCTGAAGAATCCTATCACGGTTGGATTGCTTGCAATAATAACCATTTCCTTTTGTTTAATCTCAAGGAGTTGGAGAGCTTCTGAGGGCAAAAGAGCTCCTGAAGCCAAGGGTGCATGGCCTTTTTTTGGTCACCTTCCCTCATTAGGAAGGTCGACCAAGCCTCTTCACATAGCCTTGGGAGCCATGGCTGACAAATACGGACCCGTTTTCACGGTCCGGCTCGGGGTGCGTGAATCTTTGGTGGTGAGTAGTAGTGAGATGGCTAAGGAGTGCTTCACCATCAAAGACACATGCTTGTCCTCCCGACCAAAAATGGCCGTTGTAGAACACATTGGCTATAACTACGCAATGTTTGGGTTTGCACCTTACGGACCATACTGGAGAGAAATGCGTAAGATTACCACTTTAGAGTTGCTTTCCAAGCGCCAGCTCGAGCTGCTCAAACACATTCGAGGCTCAGAGGTGAGCACCTTTTTGAAAGAAATGTACAGAACTTGGAGCAGTAGAGAAAATGAAAAAAAAGGCTCAGACAATGACCAATTGTTGGTGGAGTTAAAACAATGGTTCGGCGACCTCACTCTAAACGTAATTCTCAGGATGGTAGCTGGAAAACGTTACTCTGTTGCTACTGACGAGGAAGAGAAGAACGAAGCACATCAAGTCCAGAAGGCAGTAAGGGAGTTCTTTAACTTTGTGGGGCTATTATTGGTGGGCGATGTGATTCCTCATCTTCGGTGGTTGGATTTAGGTGGACATGAGAAAGCAATGAAGAAAACCGCAAAAGAATTGGACGCCATTGTTGGAAAATGGGTGGAAGAGCATAAGCAAAAGAGAGCACTAGAAGGCGATGATGCTCATAATTGTAAAGGGGAGCAAGACTTCATAGACATCATGATTTCAATACTTGAAGGTGCAGACCTCGGCGATTTTGATGCAGATACCATCAACAAAGCCACAAGCTTGAATATGATTGCAGCAGGCAGCGATACCACCATGGTCACTTTGACATGGGCAATATCATTACTTTTAAACAACCGTGAAAAGTTGAAAAGAGCCCAAGATGAACTAGACACCGAGATAGGAAGAGAGAGATTTGTGAGTGAGTTGGATATGAGTAAACTAGTTTATATCCAAGCCATAGTGAAAGAGACGCTTCGGTTATACCCGGCAGCACCGTTATCAGGACCACGTGAATTCAACCAGGACAGCACCATCGGTGGCTACTATGTCCCAAAGGGTACACGGTTGATCACAAACCTATGGAAGATCCAAACAGACCCAAATATGTGGCCGGATGACCCATTAGGGTTCAACCCGGAGAGATTTCTAACCACTCATAAAGATGTCGATGTTAGGGGTCAACATTTTGAGTTAATTCCGTTTGGAAGTGGAAGAAGAGCATGCCCTGGACTAGATTTCAGCATTCAAATGGTGCAATTTACGTTGGCCAACTTCTTACATGCGTTCCAAGTTTCAACTCTCTCTGGTAATGCACCAATCGATATGACCGAGAGTTTTGGGCTCACAAATGTCAAAGCTACTCCACTTGAAGTTCTCATCAAACCTCGTTTATCTCATATACTTTATGGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00140 ko01100 ko04913 ko04917 ko04927 ko04934 map00140 map01100 map04913 map04917 map04927 map04934

Pfam Domains

Protein Families

p450

Protein Analysis

537

Amino Acids

60.61

Weight (kDa)

6.91

Isoelectric Point (pI)

33.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	43 - 516	1.2e-89	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

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Orthologous Genes (Group: OG0000137)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31940 AT4G31950 AT4G31970
fragaria_vesca	FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica	MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica	Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis	pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis	RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata	RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora	Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii	Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa	Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha	Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana	Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	565
AccI	GTMKAC	1 cut(s)	173
AciI	CCGC	1 cut(s)	798
AclI	AACGTT	1 cut(s)	634
AclWI	GGATC	1 cut(s)	1282
AcoI	YGGCCR	3 cut(s)	336, 1310, 1467
AcsI	RAATTY	1 cut(s)	1214
AcuI	CTGAAG	2 cut(s)	44, 141
AcvI	CACGTG	1 cut(s)	1211
AcyI	GRCGYC	1 cut(s)	813
AfaI	GTAC	2 cut(s)	509, 1261
AfiI	CCNNNNNNNGG	5 cut(s)	146, 164, 244, 565, 1202
AhlI	ACTAGT	1 cut(s)	1141
AjnI	CCWGG	2 cut(s)	1221, 1426
AluBI	AGCT	7 cut(s)	98, 116, 451, 457, 626, 981, 1559
AluI	AGCT	7 cut(s)	98, 116, 451, 457, 626, 981, 1559
Alw21I	GWGCWC	3 cut(s)	118, 491, 859
Alw26I	GTCTC	1 cut(s)	1163
AlwI	GGATC	1 cut(s)	1282
Ama87I	CYCGRG	2 cut(s)	242, 452
AoxI	GGCC	4 cut(s)	137, 336, 1310, 1467
ApeKI	GCWGC	4 cut(s)	457, 995, 1002, 1190
ApoI	RAATTY	1 cut(s)	1214
AspLEI	GCGC	1 cut(s)	447
AspS9I	GGNCC	4 cut(s)	221, 235, 392, 1205
AsuC2I	CCSGG	2 cut(s)	1187, 1337
AsuHPI	GGTGA	4 cut(s)	143, 277, 289, 496
AvaI	CYCGRG	2 cut(s)	242, 452
AvaII	GGWCC	4 cut(s)	221, 235, 392, 1205
BalI	TGGCCA	1 cut(s)	1469
BanII	GRGCYC	3 cut(s)	118, 1078, 1545
BbrPI	CACGTG	1 cut(s)	1211
Bbv12I	GWGCWC	3 cut(s)	118, 491, 859
BbvI	GCAGC	4 cut(s)	444, 1007, 1014, 1202
BccI	CCATC	5 cut(s)	274, 308, 613, 971, 1241
BceAI	ACGGC	1 cut(s)	323
BcgI	CGANNNNNNTGC	2 cut(s)	935, 969
BciT130I	CCWGG	2 cut(s)	1223, 1428
BclI	TGATCA	1 cut(s)	1269
BcnI	CCSGG	2 cut(s)	1187, 1337
BcoDI	GTCTC	1 cut(s)	1163
BcuI	ACTAGT	1 cut(s)	1141
BfaI	CTAG	4 cut(s)	860, 1088, 1142, 1433
BfoI	RGCGCY	1 cut(s)	448
BisI	GCNGC	4 cut(s)	458, 996, 1003, 1191
BlsI	GCNGC	4 cut(s)	459, 997, 1004, 1192
Bme1390I	CCNGG	4 cut(s)	1187, 1223, 1337, 1428
Bme18I	GGWCC	4 cut(s)	221, 235, 392, 1205
BmeT110I	CYCGRG	2 cut(s)	242, 452
BmgT120I	GGNCC	4 cut(s)	221, 235, 392, 1205
BmiI	GGNNCC	2 cut(s)	202, 223
BmrFI	CCNGG	4 cut(s)	1187, 1223, 1337, 1428
BmsI	GCATC	2 cut(s)	862, 943
BpmI	CTGGAG	1 cut(s)	421
Bpu10I	CCTNAGC	1 cut(s)	285
BpuEI	CTTGAG	1 cut(s)	67
BpuMI	CCSGG	2 cut(s)	1187, 1337
Bsa29I	ATCGAT	1 cut(s)	1521
BsaAI	YACGTR	1 cut(s)	1211
BsaHI	GRCGYC	1 cut(s)	813
BsaJI	CCNNGG	6 cut(s)	126, 195, 204, 940, 1014, 1426
Bsc4I	CCNNNNNNNGG	5 cut(s)	146, 164, 244, 565, 1202
Bse1I	ACTGG	1 cut(s)	404
Bse3DI	GCAATG	2 cut(s)	375, 792
BseBI	CCWGG	2 cut(s)	1223, 1428
BseCI	ATCGAT	1 cut(s)	1521
BseDI	CCNNGG	6 cut(s)	126, 195, 204, 940, 1014, 1426
BseGI	GGATG	2 cut(s)	624, 1321
BseLI	CCNNNNNNNGG	5 cut(s)	146, 164, 244, 565, 1202
BseMI	GCAATG	2 cut(s)	375, 792
BseMII	CTCAG	4 cut(s)	93, 492, 561, 628
BseNI	ACTGG	1 cut(s)	404
BseXI	GCAGC	4 cut(s)	444, 1007, 1014, 1202
BsgI	GTGCAG	1 cut(s)	954
BshFI	GGCC	4 cut(s)	139, 338, 1312, 1469
BshVI	ATCGAT	1 cut(s)	1521
BsiHKAI	GWGCWC	3 cut(s)	118, 491, 859
BsiHKCI	CYCGRG	2 cut(s)	242, 452
BsiSI	CCGG	4 cut(s)	238, 1187, 1313, 1337
BslFI	GGGAC	1 cut(s)	1235
BslI	CCNNNNNNNGG	5 cut(s)	146, 164, 244, 565, 1202
BsmAI	GTCTC	1 cut(s)	1163
BsmBI	CGTCTC	1 cut(s)	1163
BsmFI	GGGAC	1 cut(s)	1235
BsmI	GAATGC	1 cut(s)	1443
BsnI	GGCC	4 cut(s)	139, 338, 1312, 1469
BsoBI	CYCGRG	2 cut(s)	242, 452
Bsp1286I	GDGCHC	5 cut(s)	118, 491, 859, 1078, 1545
Bsp1407I	TGTACA	1 cut(s)	507
Bsp143I	GATC	2 cut(s)	1269, 1287
Bsp19I	CCATGG	2 cut(s)	204, 1014
BspACI	CCGC	1 cut(s)	798
BspANI	GGCC	4 cut(s)	139, 338, 1312, 1469
BspCNI	CTCAG	4 cut(s)	94, 491, 560, 627
BspDI	ATCGAT	1 cut(s)	1521
BspHI	TCATGA	1 cut(s)	912
BspLI	GGNNCC	2 cut(s)	202, 223
BspPI	GGATC	1 cut(s)	1282
BspQI	GCTCTTC	2 cut(s)	831, 1411
BsrDI	GCAATG	2 cut(s)	375, 792
BsrGI	TGTACA	1 cut(s)	507
BsrI	ACTGG	1 cut(s)	404
BssECI	CCNNGG	6 cut(s)	126, 195, 204, 940, 1014, 1426
BssMI	GATC	2 cut(s)	1269, 1287
BssNI	GRCGYC	1 cut(s)	813
BssT1I	CCWWGG	4 cut(s)	126, 195, 204, 1014
Bst2UI	CCWGG	2 cut(s)	1223, 1428
Bst4CI	ACNGT	5 cut(s)	40, 235, 1058, 1197, 1266
Bst6I	CTCTTC	5 cut(s)	189, 654, 831, 1099, 1411
BstACI	GRCGYC	1 cut(s)	813
BstAUI	TGTACA	1 cut(s)	507
BstBAI	YACGTR	1 cut(s)	1211
BstC8I	GCNNGC	4 cut(s)	51, 449, 1000, 1423
BstDEI	CTNAG	5 cut(s)	102, 285, 478, 547, 614
BstDSI	CCRYGG	2 cut(s)	204, 1014
BstEII	GGTNACC	1 cut(s)	149
BstF5I	GGATG	2 cut(s)	624, 1321
BstH2I	RGCGCY	1 cut(s)	448
BstHHI	GCGC	1 cut(s)	447
BstKTI	GATC	2 cut(s)	1272, 1290
BstMAI	GTCTC	1 cut(s)	1163
BstMBI	GATC	2 cut(s)	1269, 1287
BstMWI	GCNNNNNNNGC	6 cut(s)	122, 131, 200, 247, 442, 457
BstNI	CCWGG	2 cut(s)	1223, 1428
BstNSI	RCATGY	3 cut(s)	315, 1425, 1484
BstPI	GGTNACC	1 cut(s)	149
BstSCI	CCNGG	4 cut(s)	1185, 1221, 1335, 1426
BstV1I	GCAGC	4 cut(s)	444, 1007, 1014, 1202
BstX2I	RGATCY	1 cut(s)	1287
BstXI	CCANNNNNNTGG	1 cut(s)	1308
BstYI	RGATCY	1 cut(s)	1287
Bsu15I	ATCGAT	1 cut(s)	1521
BsuRI	GGCC	4 cut(s)	139, 338, 1312, 1469
BsuTUI	ATCGAT	1 cut(s)	1521
BtgI	CCRYGG	2 cut(s)	204, 1014
BtgZI	GCGATG	2 cut(s)	750, 882
BtsCI	GGATG	2 cut(s)	624, 1321
Cac8I	GCNNGC	4 cut(s)	51, 449, 1000, 1423
CciI	TCATGA	1 cut(s)	912
CfoI	GCGC	1 cut(s)	447
Cfr13I	GGNCC	4 cut(s)	221, 235, 392, 1205
ClaI	ATCGAT	1 cut(s)	1521
CpoI	CGGWCCG	1 cut(s)	235
CseI	GACGC	2 cut(s)	821, 1180
Csp6I	GTAC	2 cut(s)	508, 1260
CspI	CGGWCCG	1 cut(s)	235
CviAII	CATG	9 cut(s)	135, 205, 312, 776, 913, 1015, 1029, 1422, 1481
CviQI	GTAC	2 cut(s)	508, 1260
DdeI	CTNAG	5 cut(s)	102, 285, 478, 547, 614
DpnI	GATC	2 cut(s)	1271, 1289
DpnII	GATC	2 cut(s)	1269, 1287
DraI	TTTAAA	1 cut(s)	1050
EaeI	YGGCCR	3 cut(s)	336, 1310, 1467
Eam1104I	CTCTTC	5 cut(s)	189, 654, 831, 1099, 1411
EarI	CTCTTC	5 cut(s)	189, 654, 831, 1099, 1411
Ecl136II	GAGCTC	1 cut(s)	116
Eco130I	CCWWGG	4 cut(s)	126, 195, 204, 1014
Eco24I	GRGCYC	3 cut(s)	118, 1078, 1545
Eco47I	GGWCC	4 cut(s)	221, 235, 392, 1205
Eco53kI	GAGCTC	1 cut(s)	116
Eco57I	CTGAAG	2 cut(s)	44, 141
Eco72I	CACGTG	1 cut(s)	1211
Eco88I	CYCGRG	2 cut(s)	242, 452
Eco91I	GGTNACC	1 cut(s)	149
EcoICRI	GAGCTC	1 cut(s)	116
EcoO65I	GGTNACC	1 cut(s)	149
EcoRI	GAATTC	1 cut(s)	1214
EcoRII	CCWGG	2 cut(s)	1221, 1426
EcoT14I	CCWWGG	4 cut(s)	126, 195, 204, 1014
EcoT38I	GRGCYC	3 cut(s)	118, 1078, 1545
ErhI	CCWWGG	4 cut(s)	126, 195, 204, 1014
Esp3I	CGTCTC	1 cut(s)	1163
FaeI	CATG	9 cut(s)	138, 208, 315, 779, 916, 1018, 1032, 1425, 1484
FalI	AAGNNNNNCTT	4 cut(s)	278, 310, 1158, 1190
FaqI	GGGAC	1 cut(s)	1235
FatI	CATG	9 cut(s)	134, 204, 311, 775, 912, 1014, 1028, 1421, 1480
FbaI	TGATCA	1 cut(s)	1269
FblI	GTMKAC	1 cut(s)	173
Fnu4HI	GCNGC	4 cut(s)	458, 996, 1003, 1191
FokI	GGATG	2 cut(s)	631, 1328
FriOI	GRGCYC	3 cut(s)	118, 1078, 1545
Fsp4HI	GCNGC	4 cut(s)	458, 996, 1003, 1191
FspBI	CTAG	4 cut(s)	860, 1088, 1142, 1433
GlaI	GCGC	1 cut(s)	446
GluI	GCNGC	4 cut(s)	458, 996, 1003, 1191
GsuI	CTGGAG	1 cut(s)	421
HaeII	RGCGCY	1 cut(s)	448
HaeIII	GGCC	4 cut(s)	139, 338, 1312, 1469
HapII	CCGG	4 cut(s)	238, 1187, 1313, 1337
HgaI	GACGC	2 cut(s)	821, 1180
HhaI	GCGC	1 cut(s)	447
Hin1I	GRCGYC	1 cut(s)	813
Hin1II	CATG	9 cut(s)	138, 208, 315, 779, 916, 1018, 1032, 1425, 1484
Hin6I	GCGC	1 cut(s)	445
HinP1I	GCGC	1 cut(s)	445
HincII	GTYRAC	2 cut(s)	174, 1382
HindII	GTYRAC	2 cut(s)	174, 1382
HindIII	AAGCTT	1 cut(s)	979
HinfI	GANTC	3 cut(s)	28, 254, 742
HpaII	CCGG	4 cut(s)	238, 1187, 1313, 1337
HphI	GGTGA	4 cut(s)	143, 277, 289, 496
Hpy166II	GTNNAC	5 cut(s)	174, 773, 1139, 1262, 1382
Hpy188I	TCNGA	4 cut(s)	24, 103, 481, 550
Hpy188III	TCNNGA	6 cut(s)	119, 324, 616, 685, 913, 1203
Hpy8I	GTNNAC	5 cut(s)	174, 773, 1139, 1262, 1382
HpyAV	CCTTC	5 cut(s)	162, 164, 682, 857, 923
HpyCH4III	ACNGT	5 cut(s)	40, 235, 1058, 1197, 1266
HpyCH4IV	ACGT	4 cut(s)	606, 634, 1210, 1463
HpyCH4V	TGCA	8 cut(s)	53, 134, 383, 935, 956, 995, 1456, 1514
HpyF10VI	GCNNNNNNNGC	6 cut(s)	122, 131, 200, 247, 442, 457
HpyF3I	CTNAG	5 cut(s)	102, 285, 478, 547, 614
HpySE526I	ACGT	4 cut(s)	606, 634, 1210, 1463
Hsp92I	GRCGYC	1 cut(s)	813
Hsp92II	CATG	9 cut(s)	138, 208, 315, 779, 916, 1018, 1032, 1425, 1484
HspAI	GCGC	1 cut(s)	445
Ksp22I	TGATCA	1 cut(s)	1269
Kzo9I	GATC	2 cut(s)	1269, 1287
LguI	GCTCTTC	2 cut(s)	831, 1411
LmnI	GCTCC	4 cut(s)	121, 200, 519, 892
Lsp1109I	GCAGC	4 cut(s)	444, 1007, 1014, 1202
LweI	GCATC	2 cut(s)	862, 943
MaeI	CTAG	4 cut(s)	860, 1088, 1142, 1433
MaeII	ACGT	4 cut(s)	606, 634, 1210, 1463
MaeIII	GTNAC	3 cut(s)	149, 635, 1018
MalI	GATC	2 cut(s)	1271, 1289
MboI	GATC	2 cut(s)	1269, 1287
MfeI	CAATTG	1 cut(s)	560
MflI	RGATCY	1 cut(s)	1287
MhlI	GDGCHC	5 cut(s)	118, 491, 859, 1078, 1545
MlsI	TGGCCA	1 cut(s)	1469
MluCI	AATT	7 cut(s)	560, 609, 806, 880, 1214, 1395, 1457
MluNI	TGGCCA	1 cut(s)	1469
MmeI	TCCRAC	5 cut(s)	22, 71, 741, 802, 1107
Mox20I	TGGCCA	1 cut(s)	1469
MscI	TGGCCA	1 cut(s)	1469
MseI	TTAA	6 cut(s)	77, 575, 708, 1049, 1394, 1612
MslI	CAYNNNNRTG	2 cut(s)	1362, 1448
Msp20I	TGGCCA	1 cut(s)	1469
MspI	CCGG	4 cut(s)	238, 1187, 1313, 1337
MspR9I	CCNGG	4 cut(s)	1187, 1223, 1337, 1428
MunI	CAATTG	1 cut(s)	560
Mva1269I	GAATGC	1 cut(s)	1443
MvaI	CCWGG	2 cut(s)	1223, 1428
MwoI	GCNNNNNNNGC	6 cut(s)	122, 131, 200, 247, 442, 457
NciI	CCSGG	2 cut(s)	1187, 1337
NcoI	CCATGG	2 cut(s)	204, 1014
NdeII	GATC	2 cut(s)	1269, 1287
NlaIII	CATG	9 cut(s)	138, 208, 315, 779, 916, 1018, 1032, 1425, 1484
NlaIV	GGNNCC	2 cut(s)	202, 223
NmeAIII	GCCGAG	1 cut(s)	921
NmuCI	GTSAC	2 cut(s)	149, 1018
NspI	RCATGY	3 cut(s)	315, 1425, 1484
PaeI	GCATGC	1 cut(s)	1425
PaeR7I	CTCGAG	1 cut(s)	452
PagI	TCATGA	1 cut(s)	912
PciSI	GCTCTTC	2 cut(s)	831, 1411
PcsI	WCGNNNNNNNCGW	1 cut(s)	1527
PctI	GAATGC	1 cut(s)	1443
PfeI	GAWTC	3 cut(s)	28, 254, 742
PflMI	CCANNNNNTGG	1 cut(s)	565
PkrI	GCNGC	4 cut(s)	459, 997, 1004, 1192
PmaCI	CACGTG	1 cut(s)	1211
PmlI	CACGTG	1 cut(s)	1211
Ppu21I	YACGTR	1 cut(s)	1211
Psp124BI	GAGCTC	1 cut(s)	118
Psp1406I	AACGTT	1 cut(s)	634
Psp6I	CCWGG	2 cut(s)	1221, 1426
PspCI	CACGTG	1 cut(s)	1211
PspEI	GGTNACC	1 cut(s)	149
PspGI	CCWGG	2 cut(s)	1221, 1426
PspN4I	GGNNCC	2 cut(s)	202, 223
PspPI	GGNCC	4 cut(s)	221, 235, 392, 1205
PspXI	VCTCGAGB	1 cut(s)	452
PsuI	RGATCY	1 cut(s)	1287
RsaI	GTAC	2 cut(s)	509, 1261
RsaNI	GTAC	2 cut(s)	508, 1260
RseI	CAYNNNNRTG	2 cut(s)	1362, 1448
Rsr2I	CGGWCCG	1 cut(s)	235
RsrII	CGGWCCG	1 cut(s)	235
SacI	GAGCTC	1 cut(s)	118
SalI	GTCGAC	1 cut(s)	172
SapI	GCTCTTC	2 cut(s)	831, 1411
SaqAI	TTAA	6 cut(s)	77, 575, 708, 1049, 1394, 1612
SatI	GCNGC	4 cut(s)	458, 996, 1003, 1191
Sau3AI	GATC	2 cut(s)	1269, 1287
Sau96I	GGNCC	4 cut(s)	221, 235, 392, 1205
ScrFI	CCNGG	4 cut(s)	1187, 1223, 1337, 1428
SduI	GDGCHC	5 cut(s)	118, 491, 859, 1078, 1545
SfaNI	GCATC	2 cut(s)	862, 943
Sfr274I	CTCGAG	1 cut(s)	452
SinI	GGWCC	4 cut(s)	221, 235, 392, 1205
SlaI	CTCGAG	1 cut(s)	452
SmiMI	CAYNNNNRTG	2 cut(s)	1362, 1448
SmlI	CTYRAG	2 cut(s)	82, 452
SmoI	CTYRAG	2 cut(s)	82, 452
SpeI	ACTAGT	1 cut(s)	1141
SphI	GCATGC	1 cut(s)	1425
Sse9I	AATT	7 cut(s)	560, 609, 806, 880, 1214, 1395, 1457
SsiI	CCGC	1 cut(s)	798
SspMI	CTAG	4 cut(s)	860, 1088, 1142, 1433
SstI	GAGCTC	1 cut(s)	118
StyD4I	CCNGG	4 cut(s)	1185, 1221, 1335, 1426
StyI	CCWWGG	4 cut(s)	126, 195, 204, 1014
TaaI	ACNGT	5 cut(s)	40, 235, 1058, 1197, 1266
TaiI	ACGT	4 cut(s)	609, 637, 1213, 1466
TaqI	TCGA	5 cut(s)	173, 453, 472, 1368, 1521
TaqII	GACCGA	1 cut(s)	1544
TasI	AATT	7 cut(s)	560, 609, 806, 880, 1214, 1395, 1457
TatI	WGTACW	1 cut(s)	507
TfiI	GAWTC	3 cut(s)	28, 254, 742
Tru1I	TTAA	6 cut(s)	77, 575, 708, 1049, 1394, 1612
Tru9I	TTAA	6 cut(s)	77, 575, 708, 1049, 1394, 1612
TseFI	GTSAC	2 cut(s)	149, 1018
TseI	GCWGC	4 cut(s)	457, 995, 1002, 1190
Tsp45I	GTSAC	2 cut(s)	149, 1018
TspDTI	ATGAA	4 cut(s)	549, 803, 892, 1098
TspGWI	ACGGA	3 cut(s)	234, 405, 1389
Van91I	CCANNNNNTGG	1 cut(s)	565
VpaK11BI	GGWCC	4 cut(s)	221, 235, 392, 1205
XapI	RAATTY	1 cut(s)	1214
XceI	RCATGY	3 cut(s)	315, 1425, 1484
XhoI	CTCGAG	1 cut(s)	452
XmiI	GTMKAC	1 cut(s)	173
XspI	CTAG	4 cut(s)	860, 1088, 1142, 1433

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.