Belongs to the cytochrome P450 family
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1079 |
| AatII | GACGTC | 2 cut(s) | 470, 1353 |
| Acc36I | ACCTGC | 1 cut(s) | 1417 |
| Acc65I | GGTACC | 1 cut(s) | 1224 |
| AccB1I | GGYRCC | 2 cut(s) | 1224, 1241 |
| AccI | GTMKAC | 3 cut(s) | 956, 1347, 1567 |
| AccII | CGCG | 5 cut(s) | 63, 374, 620, 776, 1230 |
| AclWI | GGATC | 3 cut(s) | 12, 1274, 1287 |
| AcoI | YGGCCR | 2 cut(s) | 128, 330 |
| AcsI | RAATTY | 1 cut(s) | 922 |
| AcyI | GRCGYC | 3 cut(s) | 467, 1350, 1481 |
| AfaI | GTAC | 5 cut(s) | 209, 500, 1166, 1213, 1226 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 122, 126, 137, 1184, 1221, 1245, 1252 |
| AflIII | ACRYGT | 2 cut(s) | 457, 1260 |
| AgsI | TTSAA | 5 cut(s) | 223, 921, 1103, 1274, 1475 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1509 |
| AjiI | CACGTC | 2 cut(s) | 1081, 1565 |
| AjnI | CCWGG | 1 cut(s) | 1513 |
| AleI | CACNNNNGTG | 1 cut(s) | 326 |
| Alw21I | GWGCWC | 3 cut(s) | 426, 549, 819 |
| Alw26I | GTCTC | 2 cut(s) | 159, 900 |
| AlwI | GGATC | 3 cut(s) | 12, 1274, 1287 |
| Ama87I | CYCGRG | 1 cut(s) | 419 |
| AoxI | GGCC | 8 cut(s) | 128, 139, 211, 330, 966, 1084, 1175, 1357 |
| ApaI | GGGCCC | 1 cut(s) | 1179 |
| ApeKI | GCWGC | 5 cut(s) | 237, 261, 533, 913, 1456 |
| ApoI | RAATTY | 1 cut(s) | 922 |
| Asp718I | GGTACC | 1 cut(s) | 1224 |
| AspA2I | CCTAGG | 1 cut(s) | 1283 |
| AspLEI | GCGC | 3 cut(s) | 65, 376, 620 |
| AspS9I | GGNCC | 7 cut(s) | 212, 511, 967, 1085, 1175, 1176, 1187 |
| AsuC2I | CCSGG | 2 cut(s) | 1246, 1407 |
| AsuHPI | GGTGA | 2 cut(s) | 878, 1427 |
| AvaI | CYCGRG | 1 cut(s) | 419 |
| AvaII | GGWCC | 2 cut(s) | 511, 1187 |
| AvrII | CCTAGG | 1 cut(s) | 1283 |
| BaeGI | GKGCMC | 4 cut(s) | 307, 753, 1179, 1406 |
| BalI | TGGCCA | 1 cut(s) | 130 |
| BamHI | GGATCC | 1 cut(s) | 1279 |
| BanI | GGYRCC | 2 cut(s) | 1224, 1241 |
| BanII | GRGCYC | 3 cut(s) | 426, 549, 1179 |
| BbsI | GAAGAC | 2 cut(s) | 776, 1212 |
| Bbv12I | GWGCWC | 3 cut(s) | 426, 549, 819 |
| BbvCI | CCTCAGC | 1 cut(s) | 1556 |
| BbvI | GCAGC | 5 cut(s) | 249, 273, 520, 925, 1443 |
| BccI | CCATC | 4 cut(s) | 120, 586, 782, 1309 |
| BceAI | ACGGC | 6 cut(s) | 226, 344, 521, 706, 1363, 1494 |
| BciT130I | CCWGG | 1 cut(s) | 1515 |
| BcnI | CCSGG | 2 cut(s) | 1246, 1407 |
| BcoDI | GTCTC | 2 cut(s) | 159, 900 |
| BfaI | CTAG | 8 cut(s) | 99, 155, 945, 1070, 1250, 1284, 1572, 1588 |
| BfmI | CTRYAG | 1 cut(s) | 379 |
| BfuAI | ACCTGC | 1 cut(s) | 1417 |
| BisI | GCNGC | 7 cut(s) | 238, 241, 262, 333, 534, 914, 1457 |
| BlnI | CCTAGG | 1 cut(s) | 1283 |
| BlsI | GCNGC | 7 cut(s) | 239, 242, 263, 334, 535, 915, 1458 |
| Bme1390I | CCNGG | 3 cut(s) | 1246, 1407, 1515 |
| Bme18I | GGWCC | 2 cut(s) | 511, 1187 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1509 |
| BmeT110I | CYCGRG | 1 cut(s) | 419 |
| BmgBI | CACGTC | 2 cut(s) | 1081, 1565 |
| BmgT120I | GGNCC | 7 cut(s) | 212, 511, 967, 1085, 1175, 1176, 1187 |
| BmiI | GGNNCC | 9 cut(s) | 114, 512, 1177, 1178, 1188, 1189, 1226, 1243, 1281 |
| BmrFI | CCNGG | 3 cut(s) | 1246, 1407, 1515 |
| BmsI | GCATC | 3 cut(s) | 703, 957, 1365 |
| BpiI | GAAGAC | 2 cut(s) | 776, 1212 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 413, 445 |
| BpmI | CTGGAG | 1 cut(s) | 830 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1556 |
| BpuEI | CTTGAG | 1 cut(s) | 920 |
| BpuMI | CCSGG | 2 cut(s) | 1246, 1407 |
| BsaHI | GRCGYC | 3 cut(s) | 467, 1350, 1481 |
| BsaI | GGTCTC | 1 cut(s) | 159 |
| BsaJI | CCNNGG | 3 cut(s) | 232, 1283, 1405 |
| BsaWI | WCCGGW | 1 cut(s) | 109 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 122, 126, 137, 1184, 1221, 1245, 1252 |
| Bse118I | RCCGGY | 2 cut(s) | 119, 1238 |
| Bse1I | ACTGG | 1 cut(s) | 560 |
| Bse3DI | GCAATG | 1 cut(s) | 201 |
| BseBI | CCWGG | 1 cut(s) | 1515 |
| BseDI | CCNNGG | 3 cut(s) | 232, 1283, 1405 |
| BseGI | GGATG | 5 cut(s) | 131, 225, 597, 793, 862 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 122, 126, 137, 1184, 1221, 1245, 1252 |
| BseMI | GCAATG | 1 cut(s) | 201 |
| BseMII | CTCAG | 3 cut(s) | 1308, 1497, 1570 |
| BseNI | ACTGG | 1 cut(s) | 560 |
| BseRI | GAGGAG | 7 cut(s) | 416, 578, 827, 841, 846, 917, 1544 |
| BseSI | GKGCMC | 4 cut(s) | 307, 753, 1179, 1406 |
| BseXI | GCAGC | 5 cut(s) | 249, 273, 520, 925, 1443 |
| BseYI | CCCAGC | 4 cut(s) | 214, 264, 1168, 1172 |
| BsgI | GTGCAG | 1 cut(s) | 1442 |
| Bsh1236I | CGCG | 5 cut(s) | 63, 374, 620, 776, 1230 |
| BshFI | GGCC | 8 cut(s) | 130, 141, 213, 332, 968, 1086, 1177, 1359 |
| BshNI | GGYRCC | 2 cut(s) | 1224, 1241 |
| BsiHKAI | GWGCWC | 3 cut(s) | 426, 549, 819 |
| BsiHKCI | CYCGRG | 1 cut(s) | 419 |
| BsiSI | CCGG | 5 cut(s) | 110, 120, 1239, 1246, 1407 |
| BslFI | GGGAC | 1 cut(s) | 1200 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 122, 126, 137, 1184, 1221, 1245, 1252 |
| BsmAI | GTCTC | 2 cut(s) | 159, 900 |
| BsmFI | GGGAC | 1 cut(s) | 1200 |
| BsnI | GGCC | 8 cut(s) | 130, 141, 213, 332, 968, 1086, 1177, 1359 |
| Bso31I | GGTCTC | 1 cut(s) | 159 |
| BsoBI | CYCGRG | 1 cut(s) | 419 |
| Bsp120I | GGGCCC | 1 cut(s) | 1175 |
| Bsp1286I | GDGCHC | 7 cut(s) | 307, 426, 549, 753, 819, 1179, 1406 |
| Bsp1407I | TGTACA | 1 cut(s) | 498 |
| Bsp143I | GATC | 3 cut(s) | 4, 690, 1279 |
| BspANI | GGCC | 8 cut(s) | 130, 141, 213, 332, 968, 1086, 1177, 1359 |
| BspCNI | CTCAG | 3 cut(s) | 1309, 1498, 1569 |
| BspFNI | CGCG | 5 cut(s) | 63, 374, 620, 776, 1230 |
| BspLI | GGNNCC | 9 cut(s) | 114, 512, 1177, 1178, 1188, 1189, 1226, 1243, 1281 |
| BspMI | ACCTGC | 1 cut(s) | 1417 |
| BspPI | GGATC | 3 cut(s) | 12, 1274, 1287 |
| BspQI | GCTCTTC | 1 cut(s) | 1059 |
| BspT107I | GGYRCC | 2 cut(s) | 1224, 1241 |
| BspTNI | GGTCTC | 1 cut(s) | 159 |
| BsrDI | GCAATG | 1 cut(s) | 201 |
| BsrFI | RCCGGY | 2 cut(s) | 119, 1238 |
| BsrGI | TGTACA | 1 cut(s) | 498 |
| BsrI | ACTGG | 1 cut(s) | 560 |
| BssAI | RCCGGY | 2 cut(s) | 119, 1238 |
| BssECI | CCNNGG | 3 cut(s) | 232, 1283, 1405 |
| BssMI | GATC | 3 cut(s) | 4, 690, 1279 |
| BssNI | GRCGYC | 3 cut(s) | 467, 1350, 1481 |
| BssT1I | CCWWGG | 1 cut(s) | 1283 |
| Bst2UI | CCWGG | 1 cut(s) | 1515 |
| Bst4CI | ACNGT | 7 cut(s) | 25, 284, 292, 328, 498, 1211, 1216 |
| Bst6I | CTCTTC | 1 cut(s) | 1059 |
| BstACI | GRCGYC | 3 cut(s) | 467, 1350, 1481 |
| BstAUI | TGTACA | 1 cut(s) | 498 |
| BstC8I | GCNNGC | 4 cut(s) | 1232, 1236, 1240, 1446 |
| BstDEI | CTNAG | 3 cut(s) | 1317, 1506, 1556 |
| BstF5I | GGATG | 5 cut(s) | 131, 225, 597, 793, 862 |
| BstFNI | CGCG | 5 cut(s) | 63, 374, 620, 776, 1230 |
| BstHHI | GCGC | 3 cut(s) | 65, 376, 620 |
| BstKTI | GATC | 3 cut(s) | 7, 693, 1282 |
| BstMAI | GTCTC | 2 cut(s) | 159, 900 |
| BstMBI | GATC | 3 cut(s) | 4, 690, 1279 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 237, 448, 814 |
| BstNI | CCWGG | 1 cut(s) | 1515 |
| BstNSI | RCATGY | 2 cut(s) | 69, 461 |
| BstSCI | CCNGG | 3 cut(s) | 1244, 1405, 1513 |
| BstSFI | CTRYAG | 1 cut(s) | 379 |
| BstSLI | GKGCMC | 4 cut(s) | 307, 753, 1179, 1406 |
| BstUI | CGCG | 5 cut(s) | 63, 374, 620, 776, 1230 |
| BstV1I | GCAGC | 5 cut(s) | 249, 273, 520, 925, 1443 |
| BstV2I | GAAGAC | 2 cut(s) | 776, 1212 |
| BstX2I | RGATCY | 2 cut(s) | 4, 1279 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 328, 343 |
| BstYI | RGATCY | 2 cut(s) | 4, 1279 |
| BsuRI | GGCC | 8 cut(s) | 130, 141, 213, 332, 968, 1086, 1177, 1359 |
| BtgZI | GCGATG | 1 cut(s) | 776 |
| BtrI | CACGTC | 2 cut(s) | 1081, 1565 |
| BtsCI | GGATG | 5 cut(s) | 131, 225, 597, 793, 862 |
| BtsI | GCAGTG | 1 cut(s) | 716 |
| BtsIMutI | CAGTG | 2 cut(s) | 553, 716 |
| BveI | ACCTGC | 1 cut(s) | 1417 |
| Cac8I | GCNNGC | 4 cut(s) | 1232, 1236, 1240, 1446 |
| CfoI | GCGC | 3 cut(s) | 65, 376, 620 |
| Cfr10I | RCCGGY | 2 cut(s) | 119, 1238 |
| Cfr13I | GGNCC | 7 cut(s) | 212, 511, 967, 1085, 1175, 1176, 1187 |
| CseI | GACGC | 4 cut(s) | 580, 609, 1148, 1470 |
| Csp6I | GTAC | 5 cut(s) | 208, 499, 1165, 1212, 1225 |
| CviQI | GTAC | 5 cut(s) | 208, 499, 1165, 1212, 1225 |
| DdeI | CTNAG | 3 cut(s) | 1317, 1506, 1556 |
| DpnI | GATC | 3 cut(s) | 6, 692, 1281 |
| DpnII | GATC | 3 cut(s) | 4, 690, 1279 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1079 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1509 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1079 |
| EaeI | YGGCCR | 2 cut(s) | 128, 330 |
| Eam1104I | CTCTTC | 1 cut(s) | 1059 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1509 |
| EarI | CTCTTC | 1 cut(s) | 1059 |
| EciI | GGCGGA | 4 cut(s) | 177, 215, 218, 866 |
| Ecl136II | GAGCTC | 2 cut(s) | 424, 547 |
| Eco130I | CCWWGG | 1 cut(s) | 1283 |
| Eco24I | GRGCYC | 3 cut(s) | 426, 549, 1179 |
| Eco31I | GGTCTC | 1 cut(s) | 159 |
| Eco47I | GGWCC | 2 cut(s) | 511, 1187 |
| Eco53kI | GAGCTC | 2 cut(s) | 424, 547 |
| Eco88I | CYCGRG | 1 cut(s) | 419 |
| EcoICRI | GAGCTC | 2 cut(s) | 424, 547 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1176, 1187 |
| EcoRII | CCWGG | 1 cut(s) | 1513 |
| EcoT14I | CCWWGG | 1 cut(s) | 1283 |
| EcoT38I | GRGCYC | 3 cut(s) | 426, 549, 1179 |
| ErhI | CCWWGG | 1 cut(s) | 1283 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 900, 932 |
| FaqI | GGGAC | 1 cut(s) | 1200 |
| FauI | CCCGC | 3 cut(s) | 124, 387, 592 |
| FblI | GTMKAC | 3 cut(s) | 956, 1347, 1567 |
| Fnu4HI | GCNGC | 7 cut(s) | 238, 241, 262, 333, 534, 914, 1457 |
| FokI | GGATG | 5 cut(s) | 138, 212, 604, 800, 869 |
| FriOI | GRGCYC | 3 cut(s) | 426, 549, 1179 |
| Fsp4HI | GCNGC | 7 cut(s) | 238, 241, 262, 333, 534, 914, 1457 |
| FspBI | CTAG | 8 cut(s) | 99, 155, 945, 1070, 1250, 1284, 1572, 1588 |
| GlaI | GCGC | 3 cut(s) | 64, 375, 619 |
| GluI | GCNGC | 7 cut(s) | 238, 241, 262, 333, 534, 914, 1457 |
| GsaI | CCCAGC | 4 cut(s) | 218, 268, 1172, 1176 |
| GsuI | CTGGAG | 1 cut(s) | 830 |
| HaeIII | GGCC | 8 cut(s) | 130, 141, 213, 332, 968, 1086, 1177, 1359 |
| HapII | CCGG | 5 cut(s) | 110, 120, 1239, 1246, 1407 |
| HgaI | GACGC | 4 cut(s) | 580, 609, 1148, 1470 |
| HhaI | GCGC | 3 cut(s) | 65, 376, 620 |
| Hin1I | GRCGYC | 3 cut(s) | 467, 1350, 1481 |
| Hin6I | GCGC | 3 cut(s) | 63, 374, 618 |
| HinP1I | GCGC | 3 cut(s) | 63, 374, 618 |
| HincII | GTYRAC | 3 cut(s) | 295, 1258, 1348 |
| HindII | GTYRAC | 3 cut(s) | 295, 1258, 1348 |
| HinfI | GANTC | 5 cut(s) | 89, 433, 1106, 1270, 1510 |
| HpaII | CCGG | 5 cut(s) | 110, 120, 1239, 1246, 1407 |
| HphI | GGTGA | 2 cut(s) | 878, 1427 |
| Hpy166II | GTNNAC | 7 cut(s) | 295, 527, 957, 1258, 1348, 1568, 1577 |
| Hpy188III | TCNNGA | 9 cut(s) | 99, 315, 430, 463, 694, 899, 1117, 1202, 1316 |
| Hpy8I | GTNNAC | 7 cut(s) | 295, 527, 957, 1258, 1348, 1568, 1577 |
| Hpy99I | CGWCG | 5 cut(s) | 328, 625, 1085, 1352, 1486 |
| HpyAV | CCTTC | 8 cut(s) | 161, 229, 432, 648, 658, 854, 902, 1389 |
| HpyCH4III | ACNGT | 7 cut(s) | 25, 284, 292, 328, 498, 1211, 1216 |
| HpyCH4IV | ACGT | 6 cut(s) | 467, 579, 1080, 1260, 1350, 1564 |
| HpyCH4V | TGCA | 5 cut(s) | 85, 716, 745, 1426, 1459 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 237, 448, 814 |
| HpyF3I | CTNAG | 3 cut(s) | 1317, 1506, 1556 |
| HpySE526I | ACGT | 6 cut(s) | 467, 579, 1080, 1260, 1350, 1564 |
| Hsp92I | GRCGYC | 3 cut(s) | 467, 1350, 1481 |
| HspAI | GCGC | 3 cut(s) | 63, 374, 618 |
| KflI | GGGWCCC | 1 cut(s) | 1187 |
| KpnI | GGTACC | 1 cut(s) | 1228 |
| KroI | GCCGGC | 1 cut(s) | 1238 |
| KroNI | GCCGGC | 1 cut(s) | 1240 |
| Kzo9I | GATC | 3 cut(s) | 4, 690, 1279 |
| LguI | GCTCTTC | 1 cut(s) | 1059 |
| LmnI | GCTCC | 4 cut(s) | 429, 565, 814, 833 |
| Lsp1109I | GCAGC | 5 cut(s) | 249, 273, 520, 925, 1443 |
| LweI | GCATC | 3 cut(s) | 703, 957, 1365 |
| MaeI | CTAG | 8 cut(s) | 99, 155, 945, 1070, 1250, 1284, 1572, 1588 |
| MaeII | ACGT | 6 cut(s) | 467, 579, 1080, 1260, 1350, 1564 |
| MaeIII | GTNAC | 1 cut(s) | 986 |
| MalI | GATC | 3 cut(s) | 6, 692, 1281 |
| MboI | GATC | 3 cut(s) | 4, 690, 1279 |
| MboII | GAAGA | 8 cut(s) | 647, 778, 781, 1076, 1115, 1217, 1279, 1424 |
| MflI | RGATCY | 2 cut(s) | 4, 1279 |
| MhlI | GDGCHC | 7 cut(s) | 307, 426, 549, 753, 819, 1179, 1406 |
| MlsI | TGGCCA | 1 cut(s) | 130 |
| MluCI | AATT | 5 cut(s) | 17, 48, 502, 922, 1364 |
| MluNI | TGGCCA | 1 cut(s) | 130 |
| MlyI | GAGTC | 1 cut(s) | 1519 |
| MmeI | TCCRAC | 4 cut(s) | 540, 717, 765, 1134 |
| Mox20I | TGGCCA | 1 cut(s) | 130 |
| MroNI | GCCGGC | 1 cut(s) | 1238 |
| MscI | TGGCCA | 1 cut(s) | 130 |
| MseI | TTAA | 5 cut(s) | 20, 72, 576, 1368, 1467 |
| MslI | CAYNNNNRTG | 2 cut(s) | 326, 1341 |
| Msp20I | TGGCCA | 1 cut(s) | 130 |
| MspA1I | CMGCKG | 2 cut(s) | 264, 1172 |
| MspI | CCGG | 5 cut(s) | 110, 120, 1239, 1246, 1407 |
| MspR9I | CCNGG | 3 cut(s) | 1246, 1407, 1515 |
| MvaI | CCWGG | 1 cut(s) | 1515 |
| MvnI | CGCG | 5 cut(s) | 63, 374, 620, 776, 1230 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 237, 448, 814 |
| NaeI | GCCGGC | 1 cut(s) | 1240 |
| NciI | CCSGG | 2 cut(s) | 1246, 1407 |
| NdeII | GATC | 3 cut(s) | 4, 690, 1279 |
| NgoMIV | GCCGGC | 1 cut(s) | 1238 |
| NlaIV | GGNNCC | 9 cut(s) | 114, 512, 1177, 1178, 1188, 1189, 1226, 1243, 1281 |
| NmeAIII | GCCGAG | 2 cut(s) | 213, 269 |
| NmuCI | GTSAC | 1 cut(s) | 986 |
| NspI | RCATGY | 2 cut(s) | 69, 461 |
| OliI | CACNNNNGTG | 1 cut(s) | 326 |
| PaeR7I | CTCGAG | 1 cut(s) | 419 |
| PciI | ACATGT | 1 cut(s) | 457 |
| PciSI | GCTCTTC | 1 cut(s) | 1059 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 417 |
| PdiI | GCCGGC | 1 cut(s) | 1240 |
| PfeI | GAWTC | 4 cut(s) | 89, 433, 1106, 1270 |
| PkrI | GCNGC | 7 cut(s) | 239, 242, 263, 334, 535, 915, 1458 |
| PleI | GAGTC | 1 cut(s) | 1518 |
| PpsI | GAGTC | 1 cut(s) | 1518 |
| PpuMI | RGGWCCY | 1 cut(s) | 1187 |
| PscI | ACATGT | 1 cut(s) | 457 |
| Psp124BI | GAGCTC | 2 cut(s) | 426, 549 |
| Psp5II | RGGWCCY | 1 cut(s) | 1187 |
| Psp6I | CCWGG | 1 cut(s) | 1513 |
| PspFI | CCCAGC | 4 cut(s) | 214, 264, 1168, 1172 |
| PspGI | CCWGG | 1 cut(s) | 1513 |
| PspN4I | GGNNCC | 9 cut(s) | 114, 512, 1177, 1178, 1188, 1189, 1226, 1243, 1281 |
| PspOMI | GGGCCC | 1 cut(s) | 1175 |
| PspPI | GGNCC | 7 cut(s) | 212, 511, 967, 1085, 1175, 1176, 1187 |
| PspPPI | RGGWCCY | 1 cut(s) | 1187 |
| PspXI | VCTCGAGB | 1 cut(s) | 419 |
| PsuI | RGATCY | 2 cut(s) | 4, 1279 |
| PvuII | CAGCTG | 2 cut(s) | 264, 1172 |
| RsaI | GTAC | 5 cut(s) | 209, 500, 1166, 1213, 1226 |
| RsaNI | GTAC | 5 cut(s) | 208, 499, 1165, 1212, 1225 |
| RseI | CAYNNNNRTG | 2 cut(s) | 326, 1341 |
| SacI | GAGCTC | 2 cut(s) | 426, 549 |
| SalI | GTCGAC | 1 cut(s) | 1346 |
| SapI | GCTCTTC | 1 cut(s) | 1059 |
| SaqAI | TTAA | 5 cut(s) | 20, 72, 576, 1368, 1467 |
| SatI | GCNGC | 7 cut(s) | 238, 241, 262, 333, 534, 914, 1457 |
| Sau3AI | GATC | 3 cut(s) | 4, 690, 1279 |
| Sau96I | GGNCC | 7 cut(s) | 212, 511, 967, 1085, 1175, 1176, 1187 |
| SchI | GAGTC | 1 cut(s) | 1519 |
| ScrFI | CCNGG | 3 cut(s) | 1246, 1407, 1515 |
| SduI | GDGCHC | 7 cut(s) | 307, 426, 549, 753, 819, 1179, 1406 |
| SfaNI | GCATC | 3 cut(s) | 703, 957, 1365 |
| SfcI | CTRYAG | 1 cut(s) | 379 |
| Sfr274I | CTCGAG | 1 cut(s) | 419 |
| SgrAI | CRCCGGYG | 1 cut(s) | 119 |
| SinI | GGWCC | 2 cut(s) | 511, 1187 |
| SlaI | CTCGAG | 1 cut(s) | 419 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 326, 1341 |
| SmlI | CTYRAG | 2 cut(s) | 419, 899 |
| SmoI | CTYRAG | 2 cut(s) | 419, 899 |
| Sse9I | AATT | 5 cut(s) | 17, 48, 502, 922, 1364 |
| SspMI | CTAG | 8 cut(s) | 99, 155, 945, 1070, 1250, 1284, 1572, 1588 |
| SstI | GAGCTC | 2 cut(s) | 426, 549 |
| StyD4I | CCNGG | 3 cut(s) | 1244, 1405, 1513 |
| StyI | CCWWGG | 1 cut(s) | 1283 |
| TaaI | ACNGT | 7 cut(s) | 25, 284, 292, 328, 498, 1211, 1216 |
| TaiI | ACGT | 6 cut(s) | 470, 582, 1083, 1263, 1353, 1567 |
| TaqI | TCGA | 8 cut(s) | 316, 420, 431, 436, 477, 543, 1347, 1450 |
| TasI | AATT | 5 cut(s) | 17, 48, 502, 922, 1364 |
| TatI | WGTACW | 1 cut(s) | 498 |
| TauI | GCSGC | 2 cut(s) | 243, 335 |
| TfiI | GAWTC | 4 cut(s) | 89, 433, 1106, 1270 |
| Tru1I | TTAA | 5 cut(s) | 20, 72, 576, 1368, 1467 |
| Tru9I | TTAA | 5 cut(s) | 20, 72, 576, 1368, 1467 |
| TscAI | CASTG | 2 cut(s) | 560, 723 |
| TseFI | GTSAC | 1 cut(s) | 986 |
| TseI | GCWGC | 5 cut(s) | 237, 261, 533, 913, 1456 |
| Tsp45I | GTSAC | 1 cut(s) | 986 |
| TspDTI | ATGAA | 5 cut(s) | 674, 779, 868, 873, 1064 |
| TspGWI | ACGGA | 1 cut(s) | 534 |
| TspRI | CASTG | 2 cut(s) | 560, 723 |
| VpaK11BI | GGWCC | 2 cut(s) | 511, 1187 |
| XapI | RAATTY | 1 cut(s) | 922 |
| XbaI | TCTAGA | 1 cut(s) | 98 |
| XceI | RCATGY | 2 cut(s) | 69, 461 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1198 |
| XhoI | CTCGAG | 1 cut(s) | 419 |
| XmaJI | CCTAGG | 1 cut(s) | 1283 |
| XmiI | GTMKAC | 3 cut(s) | 956, 1347, 1567 |
| XspI | CTAG | 8 cut(s) | 99, 155, 945, 1070, 1250, 1284, 1572, 1588 |
| ZraI | GACGTC | 2 cut(s) | 468, 1351 |