RLG00000035273

cytochrome P450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
63962940 .. 63964630
1691 bp
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UTR
Exon/CDS
Intron
RLM00000035273

Sequence Viewer

Length: 846 bp
ATGGTAGATGATATTCTTCTCCAAATCGAACTAGTCCTCATCGTCGTCATCACCTTCCTCTTCATCCACAGCGTTCCCCATAAAGCAATAGCATTACTGTTAAACAACCGTGAAAAGTTGAAAAGAGCCCAAGATGAACTAGACACCAGGATAGGAAGAGAGAGATTTGTGAGTGAGTCGGATGTGAGCAAGCTAGTCTATATCCAAGCCATATTGAAAGAGACGCTTCGGTTATACCTGATAGCACCATTATCAGCACCACATGAATTCGACAAGGACTACACCATAGGTGGCTACTATGTCCCAAAGGGTACACGGTTGATCACAAACCTTTGGAAGATTCAAACTGACCCAAAAATGTGGCCGGATGACCCATTAAGGTTCAAGCCGGAGAGATTTCAAACCACCCATAAGGATGTTGATGTTAGGGGTCAACACTTTGAGTTAATTCCATTTGGAAGTGGAAGAAGAGCATGCCCTGGACAATCTTTTGGTATTCAAATGGTGCAATTTGCATTGGCCAACTTCCTACATGCGTTCCAAGTTTCAACTCTTTCCGATAATGTACTAATTGATATGACCGAGAGTTTTGGGCTCACTAACGTCAAGGCTACTCCACATCACGACGCCGGCACTGCCCAGACCAAGAGTTTTAGAGCTTTCTTCACAGCTAGTGTCGCAAGCGGTGGAGCTTTTCTCCGGTTGTGGCGGAGACTCTGCTCGGACCAATGCTTCGACATCAACCGCTTCGTCACCAGCTTCACCGTTCCCTCATTCTCCTTCTACTTCATCTCCGGTTGCGGCGAAGAGACACAACATCAAAAGCTTGTAAGGATTCTATCTTAA

Protein Analysis

282

Amino Acids

32.05

Weight (kDa)

8.64

Isoelectric Point (pI)

32.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 29 - 201 1.5e-48 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 684, 709, 745, 801
AcoI YGGCCR 2 cut(s) 362, 519
AcsI RAATTY 1 cut(s) 266
AcyI GRCGYC 1 cut(s) 627
AfaI GTAC 2 cut(s) 313, 567
AgsI TTSAA 7 cut(s) 121, 217, 344, 385, 401, 500, 549
AhlI ACTAGT 1 cut(s) 31
AjnI CCWGG 2 cut(s) 146, 478
AluBI AGCT 6 cut(s) 193, 659, 671, 692, 759, 826
AluI AGCT 6 cut(s) 193, 659, 671, 692, 759, 826
Alw26I GTCTC 3 cut(s) 215, 706, 803
AoxI GGCC 2 cut(s) 362, 519
ApoI RAATTY 1 cut(s) 266
ArsI GACNNNNNNTTYG 2 cut(s) 716, 748
AspS9I GGNCC 1 cut(s) 724
AsuHPI GGTGA 3 cut(s) 43, 745, 754
AvaII GGWCC 1 cut(s) 724
BalI TGGCCA 1 cut(s) 521
BanII GRGCYC 2 cut(s) 130, 597
BciT130I CCWGG 2 cut(s) 148, 480
BclI TGATCA 1 cut(s) 321
BcoDI GTCTC 3 cut(s) 215, 706, 803
BcuI ACTAGT 1 cut(s) 31
BfaI CTAG 4 cut(s) 32, 140, 194, 672
BisI GCNGC 1 cut(s) 802
BlsI GCNGC 1 cut(s) 803
Bme1390I CCNGG 2 cut(s) 148, 480
Bme18I GGWCC 1 cut(s) 724
BmgT120I GGNCC 1 cut(s) 724
BmrFI CCNGG 2 cut(s) 148, 480
BplI GAGNNNNNCTC 2 cut(s) 681, 713
BsaHI GRCGYC 1 cut(s) 627
BsaJI CCNNGG 1 cut(s) 478
BsaWI WCCGGW 2 cut(s) 699, 794
BsaXI ACNNNNNCTCC 2 cut(s) 776, 806
Bse118I RCCGGY 1 cut(s) 629
BseBI CCWGG 2 cut(s) 148, 480
BseDI CCNNGG 1 cut(s) 478
BseGI GGATG 4 cut(s) 63, 187, 373, 421
BshFI GGCC 2 cut(s) 364, 521
BsiSI CCGG 5 cut(s) 365, 389, 630, 700, 795
BslFI GGGAC 1 cut(s) 287
BsmAI GTCTC 3 cut(s) 215, 706, 803
BsmBI CGTCTC 1 cut(s) 215
BsmFI GGGAC 1 cut(s) 287
BsnI GGCC 2 cut(s) 364, 521
Bsp1286I GDGCHC 2 cut(s) 130, 597
Bsp143I GATC 1 cut(s) 321
BspACI CCGC 4 cut(s) 684, 709, 745, 801
BspANI GGCC 2 cut(s) 364, 521
BspQI GCTCTTC 1 cut(s) 463
BsrFI RCCGGY 1 cut(s) 629
BssAI RCCGGY 1 cut(s) 629
BssECI CCNNGG 1 cut(s) 478
BssMI GATC 1 cut(s) 321
BssNI GRCGYC 1 cut(s) 627
Bst2UI CCWGG 2 cut(s) 148, 480
Bst4CI ACNGT 4 cut(s) 99, 110, 318, 766
Bst6I CTCTTC 4 cut(s) 65, 151, 463, 801
BstACI GRCGYC 1 cut(s) 627
BstC8I GCNNGC 4 cut(s) 191, 475, 631, 682
BstF5I GGATG 4 cut(s) 63, 187, 373, 421
BstKTI GATC 1 cut(s) 324
BstMAI GTCTC 3 cut(s) 215, 706, 803
BstMBI GATC 1 cut(s) 321
BstMWI GCNNNNNNNGC 2 cut(s) 635, 677
BstNI CCWGG 2 cut(s) 148, 480
BstNSI RCATGY 2 cut(s) 477, 536
BstSCI CCNGG 2 cut(s) 146, 478
BstXI CCANNNNNNTGG 1 cut(s) 360
BsuRI GGCC 2 cut(s) 364, 521
BtsCI GGATG 4 cut(s) 63, 187, 373, 421
BtsI GCAGTG 1 cut(s) 633
BtsIMutI CAGTG 1 cut(s) 633
Cac8I GCNNGC 4 cut(s) 191, 475, 631, 682
Cfr10I RCCGGY 1 cut(s) 629
Cfr13I GGNCC 1 cut(s) 724
CseI GACGC 2 cut(s) 232, 635
Csp6I GTAC 2 cut(s) 312, 566
CviAII CATG 3 cut(s) 263, 474, 533
CviQI GTAC 2 cut(s) 312, 566
DpnI GATC 1 cut(s) 323
DpnII GATC 1 cut(s) 321
EaeI YGGCCR 2 cut(s) 362, 519
Eam1104I CTCTTC 4 cut(s) 65, 151, 463, 801
EarI CTCTTC 4 cut(s) 65, 151, 463, 801
EciI GGCGGA 1 cut(s) 724
Eco24I GRGCYC 2 cut(s) 130, 597
Eco47I GGWCC 1 cut(s) 724
EcoRI GAATTC 1 cut(s) 266
EcoRII CCWGG 2 cut(s) 146, 478
EcoT38I GRGCYC 2 cut(s) 130, 597
Esp3I CGTCTC 1 cut(s) 215
FaeI CATG 3 cut(s) 266, 477, 536
FalI AAGNNNNNCTT 2 cut(s) 210, 242
FaqI GGGAC 1 cut(s) 287
FatI CATG 3 cut(s) 262, 473, 532
FbaI TGATCA 1 cut(s) 321
Fnu4HI GCNGC 1 cut(s) 802
FokI GGATG 4 cut(s) 50, 194, 380, 428
FriOI GRGCYC 2 cut(s) 130, 597
Fsp4HI GCNGC 1 cut(s) 802
FspBI CTAG 4 cut(s) 32, 140, 194, 672
GluI GCNGC 1 cut(s) 802
HaeIII GGCC 2 cut(s) 364, 521
HapII CCGG 5 cut(s) 365, 389, 630, 700, 795
HgaI GACGC 2 cut(s) 232, 635
Hin1I GRCGYC 1 cut(s) 627
Hin1II CATG 3 cut(s) 266, 477, 536
HincII GTYRAC 1 cut(s) 434
HindII GTYRAC 1 cut(s) 434
HindIII AAGCTT 1 cut(s) 824
HinfI GANTC 4 cut(s) 176, 340, 714, 835
HpaII CCGG 5 cut(s) 365, 389, 630, 700, 795
HphI GGTGA 3 cut(s) 43, 745, 754
Hpy166II GTNNAC 2 cut(s) 314, 434
Hpy188I TCNGA 3 cut(s) 181, 559, 724
Hpy188III TCNNGA 1 cut(s) 623
Hpy8I GTNNAC 2 cut(s) 314, 434
Hpy99I CGWCG 2 cut(s) 47, 629
HpyAV CCTTC 2 cut(s) 64, 790
HpyCH4III ACNGT 4 cut(s) 99, 110, 318, 766
HpyCH4IV ACGT 1 cut(s) 603
HpyCH4V TGCA 2 cut(s) 508, 515
HpyF10VI GCNNNNNNNGC 2 cut(s) 635, 677
HpySE526I ACGT 1 cut(s) 603
Hsp92I GRCGYC 1 cut(s) 627
Hsp92II CATG 3 cut(s) 266, 477, 536
KroI GCCGGC 1 cut(s) 629
KroNI GCCGGC 1 cut(s) 631
Ksp22I TGATCA 1 cut(s) 321
Kzo9I GATC 1 cut(s) 321
LguI GCTCTTC 1 cut(s) 463
LmnI GCTCC 1 cut(s) 689
MaeI CTAG 4 cut(s) 32, 140, 194, 672
MaeII ACGT 1 cut(s) 603
MaeIII GTNAC 1 cut(s) 751
MalI GATC 1 cut(s) 323
MboI GATC 1 cut(s) 321
MboII GAAGA 8 cut(s) 8, 52, 168, 349, 477, 480, 655, 818
MhlI GDGCHC 2 cut(s) 130, 597
MlsI TGGCCA 1 cut(s) 521
MluCI AATT 4 cut(s) 266, 447, 509, 570
MluNI TGGCCA 1 cut(s) 521
MlyI GAGTC 2 cut(s) 185, 708
MmeI TCCRAC 1 cut(s) 159
MnlI CCTC 3 cut(s) 47, 68, 781
Mox20I TGGCCA 1 cut(s) 521
MroNI GCCGGC 1 cut(s) 629
MscI TGGCCA 1 cut(s) 521
MseI TTAA 4 cut(s) 101, 377, 446, 844
MslI CAYNNNNRTG 1 cut(s) 414
Msp20I TGGCCA 1 cut(s) 521
MspI CCGG 5 cut(s) 365, 389, 630, 700, 795
MspR9I CCNGG 2 cut(s) 148, 480
MvaI CCWGG 2 cut(s) 148, 480
MwoI GCNNNNNNNGC 2 cut(s) 635, 677
NaeI GCCGGC 1 cut(s) 631
NdeII GATC 1 cut(s) 321
NgoMIV GCCGGC 1 cut(s) 629
NlaIII CATG 3 cut(s) 266, 477, 536
NmuCI GTSAC 1 cut(s) 751
NspI RCATGY 2 cut(s) 477, 536
PaeI GCATGC 1 cut(s) 477
PciSI GCTCTTC 1 cut(s) 463
PdiI GCCGGC 1 cut(s) 631
PfeI GAWTC 2 cut(s) 340, 835
PkrI GCNGC 1 cut(s) 803
PleI GAGTC 2 cut(s) 184, 708
PpsI GAGTC 2 cut(s) 184, 708
Psp6I CCWGG 2 cut(s) 146, 478
PspGI CCWGG 2 cut(s) 146, 478
PspPI GGNCC 1 cut(s) 724
RsaI GTAC 2 cut(s) 313, 567
RsaNI GTAC 2 cut(s) 312, 566
RseI CAYNNNNRTG 1 cut(s) 414
SapI GCTCTTC 1 cut(s) 463
SaqAI TTAA 4 cut(s) 101, 377, 446, 844
SatI GCNGC 1 cut(s) 802
Sau3AI GATC 1 cut(s) 321
Sau96I GGNCC 1 cut(s) 724
SchI GAGTC 2 cut(s) 185, 708
ScrFI CCNGG 2 cut(s) 148, 480
SduI GDGCHC 2 cut(s) 130, 597
SinI GGWCC 1 cut(s) 724
SmiMI CAYNNNNRTG 1 cut(s) 414
SpeI ACTAGT 1 cut(s) 31
SphI GCATGC 1 cut(s) 477
Sse9I AATT 4 cut(s) 266, 447, 509, 570
SsiI CCGC 4 cut(s) 684, 709, 745, 801
SspMI CTAG 4 cut(s) 32, 140, 194, 672
StyD4I CCNGG 2 cut(s) 146, 478
TaaI ACNGT 4 cut(s) 99, 110, 318, 766
TaiI ACGT 1 cut(s) 606
TaqI TCGA 3 cut(s) 27, 270, 735
TaqII GACCGA 1 cut(s) 596
TasI AATT 4 cut(s) 266, 447, 509, 570
TatI WGTACW 1 cut(s) 565
TauI GCSGC 1 cut(s) 804
TfiI GAWTC 2 cut(s) 340, 835
Tru1I TTAA 4 cut(s) 101, 377, 446, 844
Tru9I TTAA 4 cut(s) 101, 377, 446, 844
TscAI CASTG 1 cut(s) 640
TseFI GTSAC 1 cut(s) 751
Tsp45I GTSAC 1 cut(s) 751
TspDTI ATGAA 4 cut(s) 52, 150, 279, 778
TspRI CASTG 1 cut(s) 640
VpaK11BI GGWCC 1 cut(s) 724
XapI RAATTY 1 cut(s) 266
XceI RCATGY 2 cut(s) 477, 536
XspI CTAG 4 cut(s) 32, 140, 194, 672
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.