Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0000137

Physical Location & Seq

Genomic Coordinates Forward (+)

38514007 .. 38518267

Gene Structure 4261 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0272400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1263 bp

ATGGCTGCTGCGGCTAAACAAGTACAACAGCAACTACTAGAAGATGAAAACGACAGATTCTTCGTCGCCGTTCATGTCGGCGCTGGATACCACGCGCCTTCCAACGAGAAGGCCCTCAGGTCCGCCATGAAACGCGCTTGCCTCGCCGCCGCTTCCATTCTCCGCCAGGGCTCTGGTAGGTGCATAGATGCTGTCACTGCAGCTATTCAAGTGTTGGAGGATGATCCAATCACGAACGCAGGCCGGGGGTCTAATTTGACTGAAGATGGTCGTGTAGAATGTGATGCCAGTATTATGGACGGGAATTCTGGAGTATTTGGAGCTGTTGGAGCATTGCCAGGTGTCAAAAACCCCATCAAGGTTGCTGCTTTACTGGCCAAGGAGCAAATGATGGGATCCTCCCTGTTGGGCCGAATACCTCCCATCTTCCTCGTTGGTGAAGGTGCCCGCATATGGGCGAAGTCCAAGGGCATTGCTTTGTCGGCAAGCACATCAGCTGCTGATGAGTGGCTGGTGACAGAAAGGGCAAAAGCACATTGGAAAAAGTACAAAGCAATGGTAGATGATGCAAAAGCAAAGACGGAAACTTCTGCTGTTGGACTTCCTTGTAGTCCTCAAGAGGCTGCTGGAATTCCAGAATTAGAAGCTCAACCATGTGATTTTTTGAATAAAAATGGGGCAGAGGAGGATTGCATCATGGACACCGTAGGAGTTATTTGTGTAGATACTGATGGACAAATTGCATCTGGTGCCTCAAGTGGAGGCATTGCATTAAAGGTTGGTGGGCGTGTAGGGTTAGCAGCAATGCATGGTTCAGGCTGTTGGGCATCCTCCAAAGGTCTTTTTGGGGCTCCATGTATAGTCGGCTGTTGTGTAAGTGGTGCTGGAGAATATCTGATGAAAGGATTTGCAGCTCGAGAGTGCTGTGTCTCTTTATCACTTTCACAGGCAGGTCCTGCCTCTGCTTGCATGAAAGTTTTACGCTCCTTTGTTCAAGAGAGTAATCAAAATTGTACTGATAGAAGTGCCGGATTTCTAGCTGTGCAAGCTGATGCTCCTGTGATGGTTTCAGGAAGTTCTCCAAAGTTAAAAGCTATTGAGATTGCAGCTGCTTACTCTTCCTTATCCTTTGGGATAGGATTTTTCGGAAGCTCCATGGAGCGACCCAAGGTTTCAATTCTCAGGAGTACAAAATTGCAAACCAAAACTGGAGTAGACCATTTTGAAGCACGAATTGATCTTTCTCCTAAAAGGAAGCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0009987 GO:0010035 GO:0010038 GO:0010039 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0042221 GO:0044550 GO:0050896 GO:0051716 GO:0055114 GO:0070887 GO:0071241 GO:0071248 GO:0071281

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00830 ko00980 ko00981 ko01100 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00380 map00830 map00980 map00981 map01100 map04913 map04917 map04927 map04934 map05204

Pfam Domains

Protein Families

p450

Protein Analysis

420

Amino Acids

43.6

Weight (kDa)

7.85

Isoelectric Point (pI)

36.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Asparaginase_2	PF01112	21 - 351	7.4e-48	Asparaginase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000137)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31940 AT4G31950 AT4G31970
fragaria_vesca	FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica	MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica	Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis	pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis	RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata	RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora	Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii	Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa	Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha	Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana	Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	941
AccB1I	GGYRCC	2 cut(s)	443, 749
AccI	GTMKAC	1 cut(s)	1215
AccII	CGCG	2 cut(s)	95, 135
AciI	CCGC	6 cut(s)	11, 123, 147, 150, 163, 448
AclWI	GGATC	3 cut(s)	218, 390, 403
AcoI	YGGCCR	1 cut(s)	375
AcsI	RAATTY	2 cut(s)	304, 630
AcuI	CTGAAG	1 cut(s)	282
AfaI	GTAC	4 cut(s)	24, 548, 1015, 1189
AfiI	CCNNNNNNNGG	3 cut(s)	358, 453, 454
AgsI	TTSAA	5 cut(s)	209, 667, 995, 1176, 1226
AjnI	CCWGG	2 cut(s)	165, 337
Alw26I	GTCTC	1 cut(s)	934
AlwI	GGATC	3 cut(s)	218, 390, 403
AlwNI	CAGNNNCTG	2 cut(s)	500, 956
Ama87I	CYCGRG	1 cut(s)	915
AoxI	GGCC	4 cut(s)	111, 241, 375, 409
ApoI	RAATTY	2 cut(s)	304, 630
ArsI	GACNNNNNNTTYG	2 cut(s)	44, 76
AspLEI	GCGC	3 cut(s)	83, 97, 137
AspS9I	GGNCC	4 cut(s)	112, 120, 409, 953
AsuC2I	CCSGG	1 cut(s)	245
AsuHPI	GGTGA	2 cut(s)	449, 526
AvaI	CYCGRG	1 cut(s)	915
AvaII	GGWCC	2 cut(s)	120, 953
AxyI	CCTNAGG	1 cut(s)	116
BaeGI	GKGCMC	1 cut(s)	448
BalI	TGGCCA	1 cut(s)	377
BamHI	GGATCC	1 cut(s)	395
BanI	GGYRCC	2 cut(s)	443, 749
BanII	GRGCYC	2 cut(s)	173, 853
BbvI	GCAGC	8 cut(s)	212, 352, 484, 610, 812, 923, 1096, 1118
BccI	CCATC	6 cut(s)	260, 362, 385, 431, 725, 1057
BceAI	ACGGC	1 cut(s)	53
BciT130I	CCWGG	2 cut(s)	167, 339
BciVI	GTATCC	1 cut(s)	80
BcnI	CCSGG	1 cut(s)	245
BcoDI	GTCTC	1 cut(s)	934
BfaI	CTAG	2 cut(s)	38, 1037
BfmI	CTRYAG	1 cut(s)	198
BfoI	RGCGCY	1 cut(s)	84
BfuAI	ACCTGC	1 cut(s)	941
BfuI	GTATCC	1 cut(s)	80
Bme1390I	CCNGG	3 cut(s)	167, 245, 339
Bme18I	GGWCC	2 cut(s)	120, 953
BmeT110I	CYCGRG	1 cut(s)	915
BmgT120I	GGNCC	4 cut(s)	112, 120, 409, 953
BmiI	GGNNCC	4 cut(s)	397, 445, 751, 852
BmrFI	CCNGG	3 cut(s)	167, 245, 339
BmsI	GCATC	7 cut(s)	178, 274, 556, 702, 752, 836, 1042
BpmI	CTGGAG	3 cut(s)	330, 906, 1230
BpuEI	CTTGAG	2 cut(s)	600, 739
BpuMI	CCSGG	1 cut(s)	245
BsaJI	CCNNGG	6 cut(s)	166, 244, 378, 465, 1155, 1167
Bsc4I	CCNNNNNNNGG	3 cut(s)	358, 453, 454
Bse1I	ACTGG	3 cut(s)	288, 378, 1213
Bse21I	CCTNAGG	1 cut(s)	116
Bse3DI	GCAATG	5 cut(s)	332, 471, 561, 765, 810
BseBI	CCWGG	2 cut(s)	167, 339
BseDI	CCNNGG	6 cut(s)	166, 244, 378, 465, 1155, 1167
BseGI	GGATG	2 cut(s)	226, 827
BseLI	CCNNNNNNNGG	3 cut(s)	358, 453, 454
BseMI	GCAATG	5 cut(s)	332, 471, 561, 765, 810
BseMII	CTCAG	2 cut(s)	130, 1195
BseNI	ACTGG	3 cut(s)	288, 378, 1213
BseRI	GAGGAG	1 cut(s)	698
BseSI	GKGCMC	1 cut(s)	448
BseXI	GCAGC	8 cut(s)	212, 352, 484, 610, 812, 923, 1096, 1118
Bsh1236I	CGCG	2 cut(s)	95, 135
BshFI	GGCC	4 cut(s)	113, 243, 377, 411
BshNI	GGYRCC	2 cut(s)	443, 749
BsiHKCI	CYCGRG	1 cut(s)	915
BsiSI	CCGG	2 cut(s)	244, 1029
BslI	CCNNNNNNNGG	3 cut(s)	358, 453, 454
BsmAI	GTCTC	1 cut(s)	934
BsnI	GGCC	4 cut(s)	113, 243, 377, 411
BsoBI	CYCGRG	1 cut(s)	915
Bsp1286I	GDGCHC	3 cut(s)	173, 448, 853
Bsp143I	GATC	3 cut(s)	223, 395, 1237
Bsp19I	CCATGG	1 cut(s)	1155
BspACI	CCGC	6 cut(s)	11, 123, 147, 150, 163, 448
BspANI	GGCC	4 cut(s)	113, 243, 377, 411
BspCNI	CTCAG	2 cut(s)	129, 1194
BspFNI	CGCG	2 cut(s)	95, 135
BspLI	GGNNCC	4 cut(s)	397, 445, 751, 852
BspMAI	CTGCAG	1 cut(s)	202
BspMI	ACCTGC	1 cut(s)	941
BspPI	GGATC	3 cut(s)	218, 390, 403
BspT107I	GGYRCC	2 cut(s)	443, 749
BsrDI	GCAATG	5 cut(s)	332, 471, 561, 765, 810
BsrI	ACTGG	3 cut(s)	288, 378, 1213
BssECI	CCNNGG	6 cut(s)	166, 244, 378, 465, 1155, 1167
BssMI	GATC	3 cut(s)	223, 395, 1237
BssT1I	CCWWGG	4 cut(s)	378, 465, 1155, 1167
Bst2UI	CCWGG	2 cut(s)	167, 339
Bst4CI	ACNGT	1 cut(s)	706
Bst6I	CTCTTC	1 cut(s)	1123
BstAPI	GCANNNNNTGC	2 cut(s)	749, 956
BstC8I	GCNNGC	6 cut(s)	139, 241, 448, 487, 967, 1047
BstDEI	CTNAG	2 cut(s)	116, 1181
BstDSI	CCRYGG	1 cut(s)	1155
BstF5I	GGATG	2 cut(s)	226, 827
BstFNI	CGCG	2 cut(s)	95, 135
BstH2I	RGCGCY	1 cut(s)	84
BstHHI	GCGC	3 cut(s)	83, 97, 137
BstKTI	GATC	3 cut(s)	226, 398, 1240
BstMAI	GTCTC	1 cut(s)	934
BstMBI	GATC	3 cut(s)	223, 395, 1237
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 143, 197, 329, 374, 482, 749, 956, 1046
BstNI	CCWGG	2 cut(s)	167, 339
BstSCI	CCNGG	3 cut(s)	165, 243, 337
BstSFI	CTRYAG	1 cut(s)	198
BstSLI	GKGCMC	1 cut(s)	448
BstUI	CGCG	2 cut(s)	95, 135
BstV1I	GCAGC	8 cut(s)	212, 352, 484, 610, 812, 923, 1096, 1118
BstX2I	RGATCY	1 cut(s)	395
BstXI	CCANNNNNNTGG	2 cut(s)	173, 295
BstYI	RGATCY	1 cut(s)	395
Bsu36I	CCTNAGG	1 cut(s)	116
BsuI	GTATCC	1 cut(s)	80
BsuRI	GGCC	4 cut(s)	113, 243, 377, 411
BtgI	CCRYGG	1 cut(s)	1155
BtsCI	GGATG	2 cut(s)	226, 827
BtsI	GCAGTG	1 cut(s)	195
BtsIMutI	CAGTG	1 cut(s)	195
BveI	ACCTGC	1 cut(s)	941
Cac8I	GCNNGC	6 cut(s)	139, 241, 448, 487, 967, 1047
CaiI	CAGNNNCTG	2 cut(s)	500, 956
CfoI	GCGC	3 cut(s)	83, 97, 137
Cfr13I	GGNCC	4 cut(s)	112, 120, 409, 953
Csp6I	GTAC	4 cut(s)	23, 547, 1014, 1188
CviAII	CATG	8 cut(s)	74, 127, 654, 697, 809, 855, 970, 1156
CviQI	GTAC	4 cut(s)	23, 547, 1014, 1188
DdeI	CTNAG	2 cut(s)	116, 1181
DpnI	GATC	3 cut(s)	225, 397, 1239
DpnII	GATC	3 cut(s)	223, 395, 1237
EaeI	YGGCCR	1 cut(s)	375
Eam1104I	CTCTTC	1 cut(s)	1123
EarI	CTCTTC	1 cut(s)	1123
EciI	GGCGGA	2 cut(s)	112, 152
Eco130I	CCWWGG	4 cut(s)	378, 465, 1155, 1167
Eco24I	GRGCYC	2 cut(s)	173, 853
Eco47I	GGWCC	2 cut(s)	120, 953
Eco57I	CTGAAG	1 cut(s)	282
Eco81I	CCTNAGG	1 cut(s)	116
Eco88I	CYCGRG	1 cut(s)	915
EcoO109I	RGGNCCY	2 cut(s)	112, 953
EcoRI	GAATTC	2 cut(s)	304, 630
EcoRII	CCWGG	2 cut(s)	165, 337
EcoT14I	CCWWGG	4 cut(s)	378, 465, 1155, 1167
EcoT22I	ATGCAT	1 cut(s)	810
EcoT38I	GRGCYC	2 cut(s)	173, 853
ErhI	CCWWGG	4 cut(s)	378, 465, 1155, 1167
FaeI	CATG	8 cut(s)	77, 130, 657, 700, 812, 858, 973, 1159
FatI	CATG	8 cut(s)	73, 126, 653, 696, 808, 854, 969, 1155
FauI	CCCGC	1 cut(s)	455
FauNDI	CATATG	1 cut(s)	452
FblI	GTMKAC	1 cut(s)	1215
FokI	GGATG	2 cut(s)	233, 814
FriOI	GRGCYC	2 cut(s)	173, 853
FspBI	CTAG	2 cut(s)	38, 1037
GlaI	GCGC	3 cut(s)	82, 96, 136
GsuI	CTGGAG	3 cut(s)	330, 906, 1230
HaeII	RGCGCY	1 cut(s)	84
HaeIII	GGCC	4 cut(s)	113, 243, 377, 411
HapII	CCGG	2 cut(s)	244, 1029
HhaI	GCGC	3 cut(s)	83, 97, 137
Hin1II	CATG	8 cut(s)	77, 130, 657, 700, 812, 858, 973, 1159
Hin6I	GCGC	3 cut(s)	81, 95, 135
HinP1I	GCGC	3 cut(s)	81, 95, 135
HinfI	GANTC	1 cut(s)	57
HpaII	CCGG	2 cut(s)	244, 1029
HphI	GGTGA	2 cut(s)	449, 526
Hpy166II	GTNNAC	1 cut(s)	1216
Hpy188I	TCNGA	2 cut(s)	897, 1148
Hpy188III	TCNNGA	8 cut(s)	232, 309, 617, 635, 917, 995, 1071, 1183
Hpy8I	GTNNAC	1 cut(s)	1216
Hpy99I	CGWCG	1 cut(s)	68
HpyAV	CCTTC	3 cut(s)	103, 108, 434
HpyCH4III	ACNGT	1 cut(s)	706
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 143, 197, 329, 374, 482, 749, 956, 1046
HpyF3I	CTNAG	2 cut(s)	116, 1181
Hsp92II	CATG	8 cut(s)	77, 130, 657, 700, 812, 858, 973, 1159
HspAI	GCGC	3 cut(s)	81, 95, 135
Kzo9I	GATC	3 cut(s)	223, 395, 1237
LmnI	GCTCC	8 cut(s)	320, 329, 382, 856, 989, 1060, 1157, 1159
Lsp1109I	GCAGC	8 cut(s)	212, 352, 484, 610, 812, 923, 1096, 1118
LweI	GCATC	7 cut(s)	178, 274, 556, 702, 752, 836, 1042
MaeI	CTAG	2 cut(s)	38, 1037
MaeIII	GTNAC	2 cut(s)	193, 514
MalI	GATC	3 cut(s)	225, 397, 1239
MboI	GATC	3 cut(s)	223, 395, 1237
MboII	GAAGA	5 cut(s)	52, 53, 275, 418, 1110
MflI	RGATCY	1 cut(s)	395
MhlI	GDGCHC	3 cut(s)	173, 448, 853
MlsI	TGGCCA	1 cut(s)	377
MluCI	AATT	9 cut(s)	253, 304, 630, 638, 738, 1009, 1176, 1193, 1233
MluNI	TGGCCA	1 cut(s)	377
MmeI	TCCRAC	4 cut(s)	126, 195, 307, 577
Mox20I	TGGCCA	1 cut(s)	377
Mph1103I	ATGCAT	1 cut(s)	810
MscI	TGGCCA	1 cut(s)	377
MseI	TTAA	2 cut(s)	773, 1088
Msp20I	TGGCCA	1 cut(s)	377
MspA1I	CMGCKG	2 cut(s)	497, 1109
MspI	CCGG	2 cut(s)	244, 1029
MspR9I	CCNGG	3 cut(s)	167, 245, 339
MvaI	CCWGG	2 cut(s)	167, 339
MvnI	CGCG	2 cut(s)	95, 135
MwoI	GCNNNNNNNGC	9 cut(s)	11, 143, 197, 329, 374, 482, 749, 956, 1046
NciI	CCSGG	1 cut(s)	245
NcoI	CCATGG	1 cut(s)	1155
NdeI	CATATG	1 cut(s)	452
NdeII	GATC	3 cut(s)	223, 395, 1237
NlaIII	CATG	8 cut(s)	77, 130, 657, 700, 812, 858, 973, 1159
NlaIV	GGNNCC	4 cut(s)	397, 445, 751, 852
NmuCI	GTSAC	2 cut(s)	193, 514
NsiI	ATGCAT	1 cut(s)	810
PaeR7I	CTCGAG	1 cut(s)	915
PfeI	GAWTC	1 cut(s)	57
PpuMI	RGGWCCY	1 cut(s)	953
Psp5II	RGGWCCY	1 cut(s)	953
Psp6I	CCWGG	2 cut(s)	165, 337
PspGI	CCWGG	2 cut(s)	165, 337
PspN4I	GGNNCC	4 cut(s)	397, 445, 751, 852
PspPI	GGNCC	4 cut(s)	112, 120, 409, 953
PspPPI	RGGWCCY	1 cut(s)	953
PstI	CTGCAG	1 cut(s)	202
PstNI	CAGNNNCTG	2 cut(s)	500, 956
PsuI	RGATCY	1 cut(s)	395
PvuII	CAGCTG	2 cut(s)	497, 1109
RsaI	GTAC	4 cut(s)	24, 548, 1015, 1189
RsaNI	GTAC	4 cut(s)	23, 547, 1014, 1188
SaqAI	TTAA	2 cut(s)	773, 1088
Sau3AI	GATC	3 cut(s)	223, 395, 1237
Sau96I	GGNCC	4 cut(s)	112, 120, 409, 953
ScrFI	CCNGG	3 cut(s)	167, 245, 339
SduI	GDGCHC	3 cut(s)	173, 448, 853
SfaNI	GCATC	7 cut(s)	178, 274, 556, 702, 752, 836, 1042
SfcI	CTRYAG	1 cut(s)	198
Sfr274I	CTCGAG	1 cut(s)	915
SinI	GGWCC	2 cut(s)	120, 953
SlaI	CTCGAG	1 cut(s)	915
SmlI	CTYRAG	3 cut(s)	615, 754, 915
SmoI	CTYRAG	3 cut(s)	615, 754, 915
Sse9I	AATT	9 cut(s)	253, 304, 630, 638, 738, 1009, 1176, 1193, 1233
SsiI	CCGC	6 cut(s)	11, 123, 147, 150, 163, 448
SspMI	CTAG	2 cut(s)	38, 1037
StyD4I	CCNGG	3 cut(s)	165, 243, 337
StyI	CCWWGG	4 cut(s)	378, 465, 1155, 1167
TaaI	ACNGT	1 cut(s)	706
TaqI	TCGA	1 cut(s)	916
TasI	AATT	9 cut(s)	253, 304, 630, 638, 738, 1009, 1176, 1193, 1233
TatI	WGTACW	4 cut(s)	22, 546, 1013, 1187
TauI	GCSGC	3 cut(s)	14, 149, 152
TfiI	GAWTC	1 cut(s)	57
Tru1I	TTAA	2 cut(s)	773, 1088
Tru9I	TTAA	2 cut(s)	773, 1088
TscAI	CASTG	1 cut(s)	202
TseFI	GTSAC	2 cut(s)	193, 514
Tsp45I	GTSAC	2 cut(s)	193, 514
TspDTI	ATGAA	5 cut(s)	60, 62, 143, 914, 986
TspGWI	ACGGA	1 cut(s)	596
TspRI	CASTG	1 cut(s)	202
VpaK11BI	GGWCC	2 cut(s)	120, 953
XapI	RAATTY	2 cut(s)	304, 630
XhoI	CTCGAG	1 cut(s)	915
XmiI	GTMKAC	1 cut(s)	1215
XspI	CTAG	2 cut(s)	38, 1037
Zsp2I	ATGCAT	1 cut(s)	810

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.