Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr04

Orthogroup ID

OG0000137

Physical Location & Seq

Genomic Coordinates Forward (+)

5165915 .. 5167946

Gene Structure 2032 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD04G1044200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1605 bp

ATGGACTTCCACCTACCATCTCTTGTTCCTTTTGTGGTAGCATCATTGGCCTTTTCATTGTTCCTCTACTCTATAATTTTTAAGTCAAGAAAAGCAGTTAGAAAACTACCACCTCAAGCCAGAAGTGCGTGGCCGATAATTGGTCACCTACCCTTGTTAGTACGTTCGTCTGAGCCACTACATGTGGTGATAGCTCAATTGGCGGACACATACGGACCGATCTTCACTTTCATGTTCGGAGTGAAGAGAACCCTAGTTTTGAGCAGCTCGGAAATGGCGAAAGAGTGCTTAAAGACCTACGACAAAGTGTTTGCTAGCCGTGTAAGCTCTTTAGCCTCAGAAATCTTGGGCTACAACTATGCCTTCTTTCCTTTCAGCTCTTACGGCTACTACTTTAGTCATGTACAGAAGATGGTCATGGCGGAGGTCTTATCCCCCCACCGCGTCGAGATGCTCAAACACTTTAGAGAATCCGAAGTGAGTGCATCGATGAAAGAAATATACGATCGGTGGACGAAGAACAACAAGAGTAGTGGTTCCGATAAGGTGGTGGTACAGATGAAGGACTGGTTTGCGGACATAAACCAGAACGTGGTCTTTAGAATGATTATCGGGAAACGAATTTCAGAAGCTACAAATTACACGCATGGAGACTTGATAGGGAGTGATGTATTCAAGGATTGGCTTCGACTGAATGCTACTTTTGTACTGTCGGATGCGCTTCCGTTCTTGAGGTGGTTGGATTTGGGTGGCCATGAGAAGACCATGAGGAAGGTAGCAAAGGAGGTAGATCAAGTGCTTCAAGGATGGTTAGAAGAGCATAAGCAAAAGAAAAAGAGGACTGTTTCTAGTGGAGTGAAAGATGATGAGGAGGAGCGTGACTTCATGGATTTGATGCTTTCAGTTCTTGATGATGCTAAAGTTACCAATTCTTTTGAAGCTGACATTATCAACAAAGCTACCTCACTGAGTCTTCTTCTAGCAGGTGTAGATGTGACAACAGGGACATTAACATGGGCACTGTCTCTACTTCTTAACAGCCCTAAAACTCTAAAAAAGGTCCAGGAAGAGATAGACCAAAATATTGGCAGAGAGAGGGCAGTAAAAGAATCAGACGTCGACAACTTAGTCTATCTCCAAGCCGTTATCAAAGAAACGCTCCGTTTATACCCTCCCGGACCAACCTTATTGCCCCATGCATCCAATGAAGATTGCGTTCTAGCCGGCTACCATATCCCAGCAAACACTCGCGTCCTCGTCAACGTATGGAAGATTCATCGAGACCCGAAGGTCTGGCCCGATCCAAATGAGTTTCGACCTGAACGATTCTTCACAACACACAGCGACATTGATGTTAAAGGTCAGGATTTTGAGTTGATACCGTTTGGCAGTGGAAGAAGAATGTGCGCCGGAATAGCACTTGCCCTCAGGATTATGCCATTGACACTCGCTTCTTTGCTTCATGGATTTGAAATCGCAACTCCGACGGGTGAGCCGGTTGACATGCGTGAGTCGATGGAATTTACCAACTATAGAACCTCCCAACTTGAAGTCCTTCTCACTCCGCGCCTTTCTGCTCAAGTATATGAAGAGTATGGTAAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114

KEGG Pathways

Metabolic & Signaling

ko00140 ko00380 ko00830 ko00980 ko00981 ko01100 ko04913 ko04917 ko04927 ko04934 ko05204 map00140 map00380 map00830 map00980 map00981 map01100 map04913 map04917 map04927 map04934 map05204

Pfam Domains

Protein Families

p450

Protein Analysis

535

Amino Acids

60.67

Weight (kDa)

6.94

Isoelectric Point (pI)

38.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	38 - 507	1.9e-93	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000137)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31940 AT4G31950 AT4G31970
fragaria_vesca	FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica	MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica	Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis	pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis	RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata	RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora	Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii	Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa	Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha	Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana	Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	974
AasI	GACNNNNNNGTC	2 cut(s)	1127, 1289
AatII	GACGTC	1 cut(s)	1119
Acc36I	ACCTGC	1 cut(s)	974
AccB7I	CCANNNNNTGG	1 cut(s)	592
AccI	GTMKAC	1 cut(s)	1119
AccII	CGCG	3 cut(s)	444, 1251, 1567
AciI	CCGC	5 cut(s)	203, 422, 442, 575, 1565
AclWI	GGATC	1 cut(s)	1295
AcoI	YGGCCR	2 cut(s)	131, 751
AcsI	RAATTY	2 cut(s)	621, 1520
AcyI	GRCGYC	1 cut(s)	1116
AfaI	GTAC	4 cut(s)	162, 405, 555, 708
AfiI	CCNNNNNNNGG	2 cut(s)	140, 592
AflIII	ACRYGT	1 cut(s)	181
AgsI	TTSAA	5 cut(s)	676, 803, 938, 1472, 1550
AjnI	CCWGG	1 cut(s)	1062
AluBI	AGCT	7 cut(s)	194, 267, 327, 378, 632, 941, 959
AluI	AGCT	7 cut(s)	194, 267, 327, 378, 632, 941, 959
Alw26I	GTCTC	3 cut(s)	645, 1029, 1275
AlwI	GGATC	1 cut(s)	1295
AoxI	GGCC	4 cut(s)	48, 131, 751, 1295
ApeKI	GCWGC	1 cut(s)	264
ApoI	RAATTY	2 cut(s)	621, 1520
ArsI	GACNNNNNNTTYG	2 cut(s)	293, 325
Asp700I	GAANNNNTTC	1 cut(s)	1554
AspLEI	GCGC	3 cut(s)	721, 1409, 1569
AspS9I	GGNCC	4 cut(s)	215, 1060, 1178, 1296
AsuC2I	CCSGG	1 cut(s)	1176
AsuHPI	GGTGA	3 cut(s)	137, 199, 1502
AsuNHI	GCTAGC	1 cut(s)	314
AvaII	GGWCC	3 cut(s)	215, 1060, 1178
AxyI	CCTNAGG	1 cut(s)	1427
BaeGI	GKGCMC	1 cut(s)	1021
BalI	TGGCCA	1 cut(s)	753
BbsI	GAAGAC	2 cut(s)	767, 965
BbvI	GCAGC	1 cut(s)	276
BccI	CCATC	4 cut(s)	25, 406, 801, 1510
BceAI	ACGGC	3 cut(s)	303, 400, 1127
BcgI	CGANNNNNNTGC	2 cut(s)	464, 498
BciT130I	CCWGG	1 cut(s)	1064
BcnI	CCSGG	1 cut(s)	1176
BcoDI	GTCTC	3 cut(s)	645, 1029, 1275
BfaI	CTAG	5 cut(s)	254, 315, 849, 980, 1220
BfmI	CTRYAG	1 cut(s)	1531
BfuAI	ACCTGC	1 cut(s)	974
BisI	GCNGC	1 cut(s)	265
BlsI	GCNGC	1 cut(s)	266
Bme1390I	CCNGG	2 cut(s)	1064, 1176
Bme18I	GGWCC	3 cut(s)	215, 1060, 1178
BmgT120I	GGNCC	4 cut(s)	215, 1060, 1178, 1296
BmiI	GGNNCC	1 cut(s)	538
BmrFI	CCNGG	2 cut(s)	1064, 1176
BmsI	GCATC	7 cut(s)	50, 441, 494, 706, 885, 904, 1208
BmtI	GCTAGC	1 cut(s)	318
BpiI	GAAGAC	2 cut(s)	767, 965
BpuEI	CTTGAG	3 cut(s)	99, 751, 1563
BpuMI	CCSGG	1 cut(s)	1176
Bsa29I	ATCGAT	1 cut(s)	488
BsaHI	GRCGYC	1 cut(s)	1116
BsaI	GGTCTC	1 cut(s)	1275
Bsc4I	CCNNNNNNNGG	2 cut(s)	140, 592
Bse118I	RCCGGY	2 cut(s)	1223, 1495
Bse1I	ACTGG	1 cut(s)	572
Bse21I	CCTNAGG	1 cut(s)	1427
BseBI	CCWGG	1 cut(s)	1064
BseCI	ATCGAT	1 cut(s)	488
BseGI	GGATG	3 cut(s)	721, 812, 1199
BseLI	CCNNNNNNNGG	2 cut(s)	140, 592
BseMII	CTCAG	4 cut(s)	162, 351, 959, 1441
BseNI	ACTGG	1 cut(s)	572
BseRI	GAGGAG	2 cut(s)	884, 887
BseSI	GKGCMC	1 cut(s)	1021
BseXI	GCAGC	1 cut(s)	276
BseYI	CCCAGC	1 cut(s)	1237
Bsh1236I	CGCG	3 cut(s)	444, 1251, 1567
Bsh1285I	CGRYCG	1 cut(s)	508
BshFI	GGCC	4 cut(s)	50, 133, 753, 1297
BshVI	ATCGAT	1 cut(s)	488
BsiEI	CGRYCG	1 cut(s)	508
BsiSI	CCGG	4 cut(s)	1176, 1224, 1410, 1496
BslFI	GGGAC	1 cut(s)	1018
BslI	CCNNNNNNNGG	2 cut(s)	140, 592
BsmAI	GTCTC	3 cut(s)	645, 1029, 1275
BsmFI	GGGAC	1 cut(s)	1018
BsmI	GAATGC	1 cut(s)	700
BsnI	GGCC	4 cut(s)	50, 133, 753, 1297
Bso31I	GGTCTC	1 cut(s)	1275
Bsp1286I	GDGCHC	1 cut(s)	1021
Bsp1407I	TGTACA	1 cut(s)	403
Bsp143I	GATC	4 cut(s)	219, 505, 790, 1300
BspACI	CCGC	5 cut(s)	203, 422, 442, 575, 1565
BspANI	GGCC	4 cut(s)	50, 133, 753, 1297
BspCNI	CTCAG	4 cut(s)	163, 350, 960, 1440
BspDI	ATCGAT	1 cut(s)	488
BspFNI	CGCG	3 cut(s)	444, 1251, 1567
BspLI	GGNNCC	1 cut(s)	538
BspMI	ACCTGC	1 cut(s)	974
BspOI	GCTAGC	1 cut(s)	318
BspPI	GGATC	1 cut(s)	1295
BspQI	GCTCTTC	1 cut(s)	810
BspTNI	GGTCTC	1 cut(s)	1275
BsrFI	RCCGGY	2 cut(s)	1223, 1495
BsrGI	TGTACA	1 cut(s)	403
BsrI	ACTGG	1 cut(s)	572
BssAI	RCCGGY	2 cut(s)	1223, 1495
BssMI	GATC	4 cut(s)	219, 505, 790, 1300
BssNI	GRCGYC	1 cut(s)	1116
Bst2UI	CCWGG	1 cut(s)	1064
Bst4CI	ACNGT	4 cut(s)	711, 844, 1023, 1383
Bst6I	CTCTTC	4 cut(s)	239, 810, 1062, 1584
BstACI	GRCGYC	1 cut(s)	1116
BstAUI	TGTACA	1 cut(s)	403
BstC8I	GCNNGC	2 cut(s)	316, 1225
BstDEI	CTNAG	5 cut(s)	171, 337, 968, 1126, 1427
BstEII	GGTNACC	1 cut(s)	143
BstF5I	GGATG	3 cut(s)	721, 812, 1199
BstFNI	CGCG	3 cut(s)	444, 1251, 1567
BstHHI	GCGC	3 cut(s)	721, 1409, 1569
BstKTI	GATC	4 cut(s)	222, 508, 793, 1303
BstMAI	GTCTC	3 cut(s)	645, 1029, 1275
BstMBI	GATC	4 cut(s)	219, 505, 790, 1300
BstMCI	CGRYCG	1 cut(s)	508
BstMWI	GCNNNNNNNGC	6 cut(s)	47, 125, 200, 324, 384, 1415
BstNI	CCWGG	1 cut(s)	1064
BstNSI	RCATGY	2 cut(s)	185, 1507
BstPI	GGTNACC	1 cut(s)	143
BstSCI	CCNGG	2 cut(s)	1062, 1174
BstSFI	CTRYAG	1 cut(s)	1531
BstSLI	GKGCMC	1 cut(s)	1021
BstUI	CGCG	3 cut(s)	444, 1251, 1567
BstV1I	GCAGC	1 cut(s)	276
BstV2I	GAAGAC	2 cut(s)	767, 965
BstXI	CCANNNNNNTGG	1 cut(s)	1085
Bsu15I	ATCGAT	1 cut(s)	488
Bsu36I	CCTNAGG	1 cut(s)	1427
BsuRI	GGCC	4 cut(s)	50, 133, 753, 1297
BsuTUI	ATCGAT	1 cut(s)	488
BtsCI	GGATG	3 cut(s)	721, 812, 1199
BtsI	GCAGTG	1 cut(s)	1396
BtsIMutI	CAGTG	3 cut(s)	965, 1019, 1396
BveI	ACCTGC	1 cut(s)	974
Cac8I	GCNNGC	2 cut(s)	316, 1225
CfoI	GCGC	3 cut(s)	721, 1409, 1569
Cfr10I	RCCGGY	2 cut(s)	1223, 1495
Cfr13I	GGNCC	4 cut(s)	215, 1060, 1178, 1296
ClaI	ATCGAT	1 cut(s)	488
CpoI	CGGWCCG	1 cut(s)	215
CseI	GACGC	2 cut(s)	433, 1240
Csp6I	GTAC	4 cut(s)	161, 404, 554, 707
CspCI	CAANNNNNGTGG	2 cut(s)	514, 549
CspI	CGGWCCG	1 cut(s)	215
CviQI	GTAC	4 cut(s)	161, 404, 554, 707
DdeI	CTNAG	5 cut(s)	171, 337, 968, 1126, 1427
DpnI	GATC	4 cut(s)	221, 507, 792, 1302
DpnII	GATC	4 cut(s)	219, 505, 790, 1300
DrdI	GACNNNNNNGTC	2 cut(s)	1127, 1289
DseDI	GACNNNNNNGTC	2 cut(s)	1127, 1289
EaeI	YGGCCR	2 cut(s)	131, 751
Eam1104I	CTCTTC	4 cut(s)	239, 810, 1062, 1584
EarI	CTCTTC	4 cut(s)	239, 810, 1062, 1584
EciI	GGCGGA	2 cut(s)	218, 437
Eco31I	GGTCTC	1 cut(s)	1275
Eco47I	GGWCC	3 cut(s)	215, 1060, 1178
Eco81I	CCTNAGG	1 cut(s)	1427
Eco91I	GGTNACC	1 cut(s)	143
EcoO65I	GGTNACC	1 cut(s)	143
EcoRII	CCWGG	1 cut(s)	1062
EcoT22I	ATGCAT	1 cut(s)	1201
FaqI	GGGAC	1 cut(s)	1018
FblI	GTMKAC	1 cut(s)	1119
Fnu4HI	GCNGC	1 cut(s)	265
FokI	GGATG	3 cut(s)	728, 819, 1186
Fsp4HI	GCNGC	1 cut(s)	265
FspBI	CTAG	5 cut(s)	254, 315, 849, 980, 1220
GlaI	GCGC	3 cut(s)	720, 1408, 1568
GluI	GCNGC	1 cut(s)	265
GsaI	CCCAGC	1 cut(s)	1241
HaeIII	GGCC	4 cut(s)	50, 133, 753, 1297
HapII	CCGG	4 cut(s)	1176, 1224, 1410, 1496
HgaI	GACGC	2 cut(s)	433, 1240
HhaI	GCGC	3 cut(s)	721, 1409, 1569
Hin1I	GRCGYC	1 cut(s)	1116
Hin6I	GCGC	3 cut(s)	719, 1407, 1567
HinP1I	GCGC	3 cut(s)	719, 1407, 1567
HincII	GTYRAC	3 cut(s)	1120, 1261, 1501
HindII	GTYRAC	3 cut(s)	1120, 1261, 1501
HinfI	GANTC	6 cut(s)	470, 970, 1109, 1273, 1326, 1511
HpaII	CCGG	4 cut(s)	1176, 1224, 1410, 1496
HphI	GGTGA	3 cut(s)	137, 199, 1502
Hpy166II	GTNNAC	4 cut(s)	513, 1120, 1261, 1501
Hpy188III	TCNNGA	8 cut(s)	87, 448, 613, 730, 908, 1280, 1364, 1429
Hpy8I	GTNNAC	4 cut(s)	513, 1120, 1261, 1501
Hpy99I	CGWCG	3 cut(s)	449, 1121, 1489
HpyAV	CCTTC	5 cut(s)	373, 556, 766, 1282, 1565
HpyCH4III	ACNGT	4 cut(s)	711, 844, 1023, 1383
HpyCH4IV	ACGT	4 cut(s)	163, 591, 1116, 1263
HpyCH4V	TGCA	2 cut(s)	485, 1199
HpyF10VI	GCNNNNNNNGC	6 cut(s)	47, 125, 200, 324, 384, 1415
HpyF3I	CTNAG	5 cut(s)	171, 337, 968, 1126, 1427
HpySE526I	ACGT	4 cut(s)	163, 591, 1116, 1263
Hsp92I	GRCGYC	1 cut(s)	1116
HspAI	GCGC	3 cut(s)	719, 1407, 1567
KroI	GCCGGC	1 cut(s)	1223
KroNI	GCCGGC	1 cut(s)	1225
Kzo9I	GATC	4 cut(s)	219, 505, 790, 1300
LguI	GCTCTTC	1 cut(s)	810
LmnI	GCTCC	2 cut(s)	874, 1164
Lsp1109I	GCAGC	1 cut(s)	276
LweI	GCATC	7 cut(s)	50, 441, 494, 706, 885, 904, 1208
MaeI	CTAG	5 cut(s)	254, 315, 849, 980, 1220
MaeII	ACGT	4 cut(s)	163, 591, 1116, 1263
MaeIII	GTNAC	4 cut(s)	143, 878, 922, 994
MalI	GATC	4 cut(s)	221, 507, 792, 1302
MboI	GATC	4 cut(s)	219, 505, 790, 1300
MfeI	CAATTG	1 cut(s)	197
MhlI	GDGCHC	1 cut(s)	1021
MlsI	TGGCCA	1 cut(s)	753
MluCI	AATT	7 cut(s)	75, 138, 197, 621, 637, 928, 1520
MluNI	TGGCCA	1 cut(s)	753
MlyI	GAGTC	2 cut(s)	979, 1520
MmeI	TCCRAC	3 cut(s)	693, 720, 1508
Mox20I	TGGCCA	1 cut(s)	753
Mph1103I	ATGCAT	1 cut(s)	1201
MroNI	GCCGGC	1 cut(s)	1223
MroXI	GAANNNNTTC	1 cut(s)	1554
MscI	TGGCCA	1 cut(s)	753
MseI	TTAA	5 cut(s)	81, 290, 1010, 1035, 1356
MslI	CAYNNNNRTG	2 cut(s)	230, 1012
Msp20I	TGGCCA	1 cut(s)	753
MspI	CCGG	4 cut(s)	1176, 1224, 1410, 1496
MspR9I	CCNGG	2 cut(s)	1064, 1176
MunI	CAATTG	1 cut(s)	197
Mva1269I	GAATGC	1 cut(s)	700
MvaI	CCWGG	1 cut(s)	1064
MvnI	CGCG	3 cut(s)	444, 1251, 1567
MwoI	GCNNNNNNNGC	6 cut(s)	47, 125, 200, 324, 384, 1415
NaeI	GCCGGC	1 cut(s)	1225
NciI	CCSGG	1 cut(s)	1176
NdeII	GATC	4 cut(s)	219, 505, 790, 1300
NgoMIV	GCCGGC	1 cut(s)	1223
NheI	GCTAGC	1 cut(s)	314
NlaIV	GGNNCC	1 cut(s)	538
NmuCI	GTSAC	3 cut(s)	143, 878, 994
NsiI	ATGCAT	1 cut(s)	1201
NspI	RCATGY	2 cut(s)	185, 1507
PaqCI	CACCTGC	1 cut(s)	974
PciI	ACATGT	1 cut(s)	181
PciSI	GCTCTTC	1 cut(s)	810
PcsI	WCGNNNNNNNCGW	2 cut(s)	275, 1321
PctI	GAATGC	1 cut(s)	700
PdiI	GCCGGC	1 cut(s)	1225
PdmI	GAANNNNTTC	1 cut(s)	1554
PfeI	GAWTC	4 cut(s)	470, 1109, 1273, 1326
PflMI	CCANNNNNTGG	1 cut(s)	592
PfoI	TCCNGGA	2 cut(s)	1062, 1174
PkrI	GCNGC	1 cut(s)	266
Ple19I	CGATCG	1 cut(s)	508
PleI	GAGTC	2 cut(s)	978, 1519
PpsI	GAGTC	2 cut(s)	978, 1519
PscI	ACATGT	1 cut(s)	181
Psp6I	CCWGG	1 cut(s)	1062
PspEI	GGTNACC	1 cut(s)	143
PspFI	CCCAGC	1 cut(s)	1237
PspGI	CCWGG	1 cut(s)	1062
PspN4I	GGNNCC	1 cut(s)	538
PspPI	GGNCC	4 cut(s)	215, 1060, 1178, 1296
PvuI	CGATCG	1 cut(s)	508
RsaI	GTAC	4 cut(s)	162, 405, 555, 708
RsaNI	GTAC	4 cut(s)	161, 404, 554, 707
RseI	CAYNNNNRTG	2 cut(s)	230, 1012
Rsr2I	CGGWCCG	1 cut(s)	215
RsrII	CGGWCCG	1 cut(s)	215
SalI	GTCGAC	1 cut(s)	1118
SapI	GCTCTTC	1 cut(s)	810
SaqAI	TTAA	5 cut(s)	81, 290, 1010, 1035, 1356
SatI	GCNGC	1 cut(s)	265
Sau3AI	GATC	4 cut(s)	219, 505, 790, 1300
Sau96I	GGNCC	4 cut(s)	215, 1060, 1178, 1296
SchI	GAGTC	2 cut(s)	979, 1520
ScrFI	CCNGG	2 cut(s)	1064, 1176
SduI	GDGCHC	1 cut(s)	1021
SfaNI	GCATC	7 cut(s)	50, 441, 494, 706, 885, 904, 1208
SfcI	CTRYAG	1 cut(s)	1531
SinI	GGWCC	3 cut(s)	215, 1060, 1178
SmiMI	CAYNNNNRTG	2 cut(s)	230, 1012
SmlI	CTYRAG	3 cut(s)	114, 730, 1578
SmoI	CTYRAG	3 cut(s)	114, 730, 1578
Sse9I	AATT	7 cut(s)	75, 138, 197, 621, 637, 928, 1520
SsiI	CCGC	5 cut(s)	203, 422, 442, 575, 1565
SspI	AATATT	1 cut(s)	1084
SspMI	CTAG	5 cut(s)	254, 315, 849, 980, 1220
StyD4I	CCNGG	2 cut(s)	1062, 1174
TaaI	ACNGT	4 cut(s)	711, 844, 1023, 1383
TaiI	ACGT	4 cut(s)	166, 594, 1119, 1266
TaqI	TCGA	7 cut(s)	447, 488, 688, 1119, 1279, 1315, 1514
TaqII	GACCGA	1 cut(s)	232
TasI	AATT	7 cut(s)	75, 138, 197, 621, 637, 928, 1520
TatI	WGTACW	2 cut(s)	403, 706
TfiI	GAWTC	4 cut(s)	470, 1109, 1273, 1326
Tru1I	TTAA	5 cut(s)	81, 290, 1010, 1035, 1356
Tru9I	TTAA	5 cut(s)	81, 290, 1010, 1035, 1356
TscAI	CASTG	3 cut(s)	972, 1026, 1396
TseFI	GTSAC	3 cut(s)	143, 878, 994
TseI	GCWGC	1 cut(s)	264
Tsp45I	GTSAC	3 cut(s)	143, 878, 994
TspDTI	ATGAA	9 cut(s)	45, 220, 506, 575, 874, 1221, 1265, 1451, 1602
TspGWI	ACGGA	3 cut(s)	228, 714, 1151
TspRI	CASTG	3 cut(s)	972, 1026, 1396
Van91I	CCANNNNNTGG	1 cut(s)	592
VpaK11BI	GGWCC	3 cut(s)	215, 1060, 1178
XapI	RAATTY	2 cut(s)	621, 1520
XceI	RCATGY	2 cut(s)	185, 1507
XmiI	GTMKAC	1 cut(s)	1119
XmnI	GAANNNNTTC	1 cut(s)	1554
XspI	CTAG	5 cut(s)	254, 315, 849, 980, 1220
ZraI	GACGTC	1 cut(s)	1117
Zsp2I	ATGCAT	1 cut(s)	1201

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.