MD15G1033900.v1.1

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000137
Physical Location & Seq
Reverse (-)
2389764 .. 2391683
1920 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1033900.v1.1.491

Sequence Viewer

Length: 1572 bp
ATGGAATTCCATCTCCCATACCAAAATACTGCCATAGCTGGAATCTTTGCCATACTTGTGCTTTCCTACTTGATCATAAATAGGAAGTCTAGAGCTGCTGCCTCGCTTCCCAAAGCACCGAAGGTTGTGGGTGGATGGCCTCTGTTAGGGCACATCCACTTGTTGGCAGGACCCGAGCTTCCCCATATAGTTTTGGGAGGCTTGGTGGACAAGTATGGACCGGTTTTTTCCATCAATGTGGGCCTCAACTCCGCCCTTGTGGTAAATTGTTGGGAGGCGGCGAAGGAGTGCTTCACCACCAATGACTTGGCTGTTTCCTCCCGTCCCAAAATCGTAGGCGTTGAACACTTGAGCTACAACGGAGCCTTGGTGGCGTATAGCCCCTATGGTCCGTATTGGCGTGAAATACGGAAAATAACAACCCACGAGCTACTCTCAAACAGCAGGCTGGAGCTGCTCAAACATGTTCGAGTGTCCGAAGTAGAGATGAGCTTGAAGGAGTTGTACAAACTGTGGATCAAAAGAAAAGGAGGCTCAGGAGAAATTTTGGTGGAGATGAAGGAGTGGTTCGGGGATTTGACACTAAATGTGGTGTTTCGAATGGTTGCTGGAAAGCGTTTCTTCAACGTTATGAATGGTAGTTTGAGCGACGAAAAGAAGGCGCGGCGGTGCCAAAACGTCATAAGGGATATGTTTCATTACATTGGGTTGTTTGTGTTGGGGGATGCTGTTCCGTGGCTTAGGTGGCTAGATATAGGTGGGCACGAGAAAGCGATGAGAAGAACAGCGAAGGAGCTAGATAGTATTGTTATGGAATGGTTGGAGGAGCACAAGCAGAGAAGAACTCAAGGCCAAGAGCAGGATTTCATGGATGTAATGCTTTCAGTCCTCAATGGAGCAGATGTTGTAGGATTTGACGCAGATACAGTCAACAAAGCGACATGTTTGGCCGTGATTGCTGGGGGCAGTGACACACCCATGGTGACTATGACATGGGCACTCTCGCTACTTTTGAACAACCGTCACACCTTGGTGAAAGCTCAAGAAGAACTAGACAAGCATGTTGGGAGAGGAAGGCTAGTGAATGAATCAGACATCAGTAACCTGGAGTACTTGCAAGCCATCTTCAAAGAAACGCTGCGAATGTACCCACCGGCACCACTCTCTGGTATAAGAAAATTCAGCGAGGACTGCACAATAGGAGGATACCATGTCCCAAAGGACACTTGGTTGATGATGAACCTATGGAAGATCCACAGTGACCCCCGGGTTTGGGTTGATCCGATGGAGTTTAAGCCGGAGAGATTTCTTACCACCCACAAGGATATCGATGTGAAGGGTCACAATTTTGAGCTCATTCCTTTTGGTGGTGGTAGACGAATATGCCCTGGAATGGGTTTTGCTCTTCAAGTCATACAGTTAACCTTGGCTAGTTTTCTGCATGCTTATGACATCTCAACTCCAGAAAATGCAGCTGTTGATATGACCGGGAGCCTCGGGCTATCAAACGTGAAATCCACCCCACTTCGAGTCCTCGTCAAACCTCGCTTATCTGAAAATATTTATGGATAA

Protein Analysis

524

Amino Acids

58.79

Weight (kDa)

8.54

Isoelectric Point (pI)

34.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 43 - 496 7e-85 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000137)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G31940 AT4G31950 AT4G31970
fragaria_vesca FvH4_1g17460 FvH4_2g40550 FvH4_2g40551 FvH4_2g40560 FvH4_2g40570 FvH4_2g40580 FvH4_2g40590 FvH4_7g16520 FvH4_7g16601 FvH4_7g16602 FvH4_7g22620 FvH4_7g22810
malus_domestica MD00G1037400.v1.1 MD00G1037500.v1.1 MD00G1175000.v1.1 MD00G1175100.v1.1 MD00G1175200.v1.1 MD03G1091600.v1.1 MD04G1043800.v1.1 MD04G1043900.v1.1 MD04G1044100.v1.1 MD04G1044200.v1.1 MD04G1044300.v1.1 MD04G1044400.v1.1 MD08G1234700.v1.1 MD14G1047100.v1.1 MD14G1163500.v1.1 MD15G1028200.v1.1 MD15G1028300.v1.1 MD15G1028400.v1.1 MD15G1028500.v1.1 MD15G1028700.v1.1 MD15G1032900.v1.1 MD15G1033100.v1.1 MD15G1033400.v1.1 MD15G1033800.v1.1 MD15G1033900.v1.1 MD15G1378500.v1.1 MD15G1378800.v1.1
prunus_persica Prupe.1G386800_v2.0.a1 Prupe.1G386800_v2.0.a1 Prupe.1G386900_v2.0.a1 Prupe.1G387000_v2.0.a1 Prupe.1G387100_v2.0.a1 Prupe.1G387200_v2.0.a1 Prupe.1G387300_v2.0.a1 Prupe.1G387400_v2.0.a1 Prupe.1G387500_v2.0.a1 Prupe.1G387700_v2.0.a1 Prupe.1G537400_v2.0.a1 Prupe.1G537600_v2.0.a1 Prupe.1G537700_v2.0.a1 Prupe.1G538000_v2.0.a1 Prupe.1G538200_v2.0.a1 Prupe.3G064700_v2.0.a1 Prupe.3G066200_v2.0.a1 Prupe.6G212300_v2.0.a1
pyrus_communis pycom04g03800 pycom04g03820 pycom09g19430 pycom11g16760 pycom14g13610 pycom15g02430 pycom15g02460 pycom15g02470 pycom15g02480 pycom15g02520 pycom15g03050 pycom15g03060 pycom15g03070 pycom15g03090 pycom15g03100 pycom15g03110 pycom15g03120 pycom15g33920
rosa_chinensis RchiOBHm_Chr1g0359661 RchiOBHm_Chr1g0359671 RchiOBHm_Chr1g0359711 RchiOBHm_Chr1g0359751 RchiOBHm_Chr1g0359791 RchiOBHm_Chr2g0107671 RchiOBHm_Chr2g0107681 RchiOBHm_Chr2g0107691 RchiOBHm_Chr5g0058861 RchiOBHm_Chr5g0058871 RchiOBHm_Chr5g0058891 RchiOBHm_Chr5g0058901 RchiOBHm_Chr5g0058921 RchiOBHm_Chr5g0058931 RchiOBHm_Chr5g0058941 RchiOBHm_Chr5g0058971 RchiOBHm_Chr5g0058991 RchiOBHm_Chr5g0059001 RchiOBHm_Chr5g0060081 RchiOBHm_Chr6g0300111 RchiOBHm_Chr6g0300121 RchiOBHm_Chr6g0300131 RchiOBHm_Chr6g0300141 RchiOBHm_Chr6g0300151 RchiOBHm_Chr6g0300161 RchiOBHm_Chr7g0223401 RchiOBHm_Chr7g0223411 RchiOBHm_Chr7g0233631
rosa_laevigata RLG00000001247 RLG00000011362 RLG00000011363 RLG00000011364 RLG00000011365 RLG00000011367 RLG00000017599 RLG00000017600 RLG00000027854 RLG00000027856 RLG00000027857 RLG00000035257 RLG00000035258 RLG00000035263 RLG00000035267 RLG00000035268 RLG00000035270 RLG00000035272 RLG00000035273 RLG00000035275 RLG00000035276 RLG00000035343
rosa_multiflora Rmu_co8382255.1_g000001 Rmu_sc0000441.1_g000120 Rmu_sc0000441.1_g000122 Rmu_sc0000493.1_g000037 Rmu_sc0000493.1_g000038 Rmu_sc0001670.1_g000042 Rmu_sc0001670.1_g000043 Rmu_sc0001670.1_g000044 Rmu_sc0002983.1_g000067 Rmu_sc0002983.1_g000074 Rmu_sc0003366.1_g000019 Rmu_sc0003494.1_g000002 Rmu_sc0003712.1_g000014 Rmu_sc0005703.1_g000003 Rmu_sc0005703.1_g000004 Rmu_sc0006429.1_g000014 Rmu_sc0006429.1_g000018 Rmu_sc0006429.1_g000019 Rmu_sc0008701.1_g000007 Rmu_sc0009050.1_g000002 Rmu_sc0009050.1_g000008 Rmu_sc0014587.1_g000001 Rmu_sc0034954.1_g000001 Rmu_ssc0000371.1_g000008 Rmu_ssc0000371.1_g000009 Rmu_ssc0000371.1_g000012 Rmu_ssc0000371.1_g000025 Rmu_ssc0000371.1_g000028
rosa_roxburghii Rroxscaffold_1G00021390 Rroxscaffold_1G00021450 Rroxscaffold_1G00021460 Rroxscaffold_1G00021470 Rroxscaffold_1G00021480 Rroxscaffold_1G00021500 Rroxscaffold_2G00136030 Rroxscaffold_2G00136040 Rroxscaffold_2G00136070 Rroxscaffold_3G00227100 Rroxscaffold_4G00296830 Rroxscaffold_4G00296860 Rroxscaffold_4G00296870 Rroxscaffold_7G00168050 Rroxscaffold_7G00168060 Rroxscaffold_7G00168080 Rroxscaffold_7G00168090
rosa_rugosa Rorug01G0272400 Rorug01G0272500 Rorug01G0272600 Rorug01G0272700 Rorug02G0146800.1 Rorug03G0204200 Rorug03G0204300 Rorug05G0319800 Rorug05G0319900 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug06G0293800 Rorug07G0281800
rosa_samantha Rh5DG412300 Rh5DG412400 Rh6CG421000 Rh7DG427300
rosa_wichuraiana Rw1G025420 Rw1G025430 Rw1G025440 Rw2G015520 Rw5G036240 Rw5G036250 Rw5G036260 Rw5G036270 Rw5G036950 Rw6G035500 Rw6G035510 Rw6G035520 Rw7G036140

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 669, 1156
AccB7I CCANNNNNTGG 2 cut(s) 163, 1166
AccI GTMKAC 1 cut(s) 1375
AccII CGCG 1 cut(s) 664
AciI CCGC 4 cut(s) 252, 278, 664, 667
AclI AACGTT 1 cut(s) 627
AclWI GGATC 3 cut(s) 524, 1246, 1274
AcoI YGGCCR 1 cut(s) 948
AcsI RAATTY 3 cut(s) 5, 543, 1178
AfaI GTAC 3 cut(s) 506, 1112, 1148
AfiI CCNNNNNNNGG 9 cut(s) 146, 163, 859, 1166, 1272, 1273, 1367, 1393, 1394
AflIII ACRYGT 2 cut(s) 463, 941
AgeI ACCGGT 1 cut(s) 220
AgsI TTSAA 6 cut(s) 344, 496, 625, 1015, 1129, 1409
AjnI CCWGG 2 cut(s) 1104, 1387
AleI CACNNNNGTG 1 cut(s) 1031
Alw21I GWGCWC 2 cut(s) 831, 1356
AlwI GGATC 3 cut(s) 524, 1246, 1274
Ama87I CYCGRG 3 cut(s) 173, 1266, 1496
AoxI GGCC 4 cut(s) 137, 241, 850, 948
ApeKI GCWGC 5 cut(s) 95, 98, 454, 1138, 1472
ApoI RAATTY 3 cut(s) 5, 543, 1178
AsiGI ACCGGT 1 cut(s) 220
AspLEI GCGC 1 cut(s) 664
AspS9I GGNCC 4 cut(s) 170, 218, 241, 389
AsuC2I CCSGG 3 cut(s) 1267, 1268, 1489
AsuHPI GGTGA 3 cut(s) 286, 994, 1045
AsuII TTCGAA 1 cut(s) 598
AvaI CYCGRG 3 cut(s) 173, 1266, 1496
AvaII GGWCC 3 cut(s) 170, 218, 389
BaeGI GKGCMC 3 cut(s) 153, 765, 1000
BanI GGYRCC 2 cut(s) 669, 1156
BanII GRGCYC 1 cut(s) 1356
BarI GAAGNNNNNNTAC 2 cut(s) 488, 520
BauI CACGAG 2 cut(s) 425, 764
Bbv12I GWGCWC 2 cut(s) 831, 1356
BbvI GCAGC 5 cut(s) 82, 85, 441, 1125, 1484
BccI CCATC 5 cut(s) 18, 129, 239, 1130, 1279
BceAI ACGGC 1 cut(s) 935
BciT130I CCWGG 2 cut(s) 1106, 1389
BciVI GTATCC 1 cut(s) 1199
BclI TGATCA 1 cut(s) 72
BcnI CCSGG 3 cut(s) 1267, 1268, 1489
BfaI CTAG 6 cut(s) 90, 749, 797, 1052, 1079, 1431
BfuI GTATCC 1 cut(s) 1199
BglI GCCNNNNNGGC 1 cut(s) 371
BisI GCNGC 7 cut(s) 96, 99, 279, 455, 665, 1139, 1473
BlsI GCNGC 7 cut(s) 97, 100, 280, 456, 666, 1140, 1474
BmcAI AGTACT 1 cut(s) 1112
Bme1390I CCNGG 5 cut(s) 1106, 1267, 1268, 1389, 1489
Bme18I GGWCC 3 cut(s) 170, 218, 389
BmeT110I CYCGRG 3 cut(s) 173, 1266, 1496
BmgT120I GGNCC 4 cut(s) 170, 218, 241, 389
BmiI GGNNCC 5 cut(s) 172, 364, 671, 1158, 1493
BmrFI CCNGG 5 cut(s) 1106, 1267, 1268, 1389, 1489
BmsI GCATC 1 cut(s) 715
BplI GAGNNNNNCTC 4 cut(s) 419, 451, 829, 861
BpmI CTGGAG 3 cut(s) 470, 1127, 1446
Bpu10I CCTNAGC 2 cut(s) 535, 740
Bpu14I TTCGAA 1 cut(s) 598
BpuEI CTTGAG 3 cut(s) 370, 831, 1026
BpuMI CCSGG 3 cut(s) 1267, 1268, 1489
Bsa29I ATCGAT 1 cut(s) 1329
BsaJI CCNNGG 9 cut(s) 366, 734, 978, 1029, 1265, 1266, 1387, 1425, 1495
BsaWI WCCGGW 1 cut(s) 220
BsaXI ACNNNNNCTCC 6 cut(s) 189, 219, 354, 384, 888, 918
Bsc4I CCNNNNNNNGG 9 cut(s) 146, 163, 859, 1166, 1272, 1273, 1367, 1393, 1394
Bse118I RCCGGY 2 cut(s) 220, 1153
BseBI CCWGG 2 cut(s) 1106, 1389
BseCI ATCGAT 1 cut(s) 1329
BseDI CCNNGG 9 cut(s) 366, 734, 978, 1029, 1265, 1266, 1387, 1425, 1495
BseGI GGATG 4 cut(s) 140, 153, 730, 877
BseLI CCNNNNNNNGG 9 cut(s) 146, 163, 859, 1166, 1272, 1273, 1367, 1393, 1394
BseMII CTCAG 1 cut(s) 549
BseRI GAGGAG 1 cut(s) 839
BseSI GKGCMC 3 cut(s) 153, 765, 1000
BseXI GCAGC 5 cut(s) 82, 85, 441, 1125, 1484
BseYI CCCAGC 1 cut(s) 959
BsgI GTGCAG 1 cut(s) 1177
Bsh1236I CGCG 1 cut(s) 664
BshFI GGCC 4 cut(s) 139, 243, 852, 950
BshNI GGYRCC 2 cut(s) 669, 1156
BshTI ACCGGT 1 cut(s) 220
BshVI ATCGAT 1 cut(s) 1329
BsiHKAI GWGCWC 2 cut(s) 831, 1356
BsiHKCI CYCGRG 3 cut(s) 173, 1266, 1496
BsiSI CCGG 5 cut(s) 221, 1154, 1267, 1298, 1488
BslFI GGGAC 2 cut(s) 309, 1199
BslI CCNNNNNNNGG 9 cut(s) 146, 163, 859, 1166, 1272, 1273, 1367, 1393, 1394
BsmFI GGGAC 2 cut(s) 309, 1199
BsnI GGCC 4 cut(s) 139, 243, 852, 950
BsoBI CYCGRG 3 cut(s) 173, 1266, 1496
Bsp119I TTCGAA 1 cut(s) 598
Bsp1286I GDGCHC 5 cut(s) 153, 765, 831, 1000, 1356
Bsp1407I TGTACA 1 cut(s) 504
Bsp143I GATC 4 cut(s) 72, 516, 1251, 1279
Bsp19I CCATGG 1 cut(s) 978
BspACI CCGC 4 cut(s) 252, 278, 664, 667
BspANI GGCC 4 cut(s) 139, 243, 852, 950
BspCNI CTCAG 1 cut(s) 548
BspDI ATCGAT 1 cut(s) 1329
BspFNI CGCG 1 cut(s) 664
BspLI GGNNCC 5 cut(s) 172, 364, 671, 1158, 1493
BspPI GGATC 3 cut(s) 524, 1246, 1274
BspQI GCTCTTC 1 cut(s) 1410
BspT104I TTCGAA 1 cut(s) 598
BspT107I GGYRCC 2 cut(s) 669, 1156
BsrFI RCCGGY 2 cut(s) 220, 1153
BsrGI TGTACA 1 cut(s) 504
BssAI RCCGGY 2 cut(s) 220, 1153
BssECI CCNNGG 9 cut(s) 366, 734, 978, 1029, 1265, 1266, 1387, 1425, 1495
BssMI GATC 4 cut(s) 72, 516, 1251, 1279
BssSI CACGAG 2 cut(s) 425, 764
BssT1I CCWWGG 4 cut(s) 366, 978, 1029, 1425
Bst2BI CACGAG 2 cut(s) 425, 764
Bst2UI CCWGG 2 cut(s) 1106, 1389
Bst4CI ACNGT 5 cut(s) 513, 928, 1022, 1259, 1419
Bst6I CTCTTC 1 cut(s) 1410
BstAUI TGTACA 1 cut(s) 504
BstBI TTCGAA 1 cut(s) 598
BstC8I GCNNGC 3 cut(s) 446, 1119, 1443
BstDEI CTNAG 2 cut(s) 535, 740
BstDSI CCRYGG 2 cut(s) 734, 978
BstENI CCTNNNNNAGG 1 cut(s) 144
BstF5I GGATG 4 cut(s) 140, 153, 730, 877
BstFNI CGCG 1 cut(s) 664
BstHHI GCGC 1 cut(s) 664
BstKTI GATC 4 cut(s) 75, 519, 1254, 1282
BstMBI GATC 4 cut(s) 72, 516, 1251, 1279
BstMWI GCNNNNNNNGC 5 cut(s) 371, 454, 745, 956, 1191
BstNI CCWGG 2 cut(s) 1106, 1389
BstNSI RCATGY 4 cut(s) 467, 945, 1064, 1445
BstSCI CCNGG 5 cut(s) 1104, 1265, 1266, 1387, 1487
BstSLI GKGCMC 3 cut(s) 153, 765, 1000
BstUI CGCG 1 cut(s) 664
BstV1I GCAGC 5 cut(s) 82, 85, 441, 1125, 1484
BstX2I RGATCY 1 cut(s) 1251
BstXI CCANNNNNNTGG 2 cut(s) 238, 307
BstYI RGATCY 1 cut(s) 1251
Bsu15I ATCGAT 1 cut(s) 1329
BsuI GTATCC 1 cut(s) 1199
BsuRI GGCC 4 cut(s) 139, 243, 852, 950
BsuTUI ATCGAT 1 cut(s) 1329
BtgI CCRYGG 2 cut(s) 734, 978
BtgZI GCGATG 1 cut(s) 788
BtsCI GGATG 4 cut(s) 140, 153, 730, 877
BtsI GCAGTG 1 cut(s) 973
BtsIMutI CAGTG 2 cut(s) 973, 1264
Cac8I GCNNGC 3 cut(s) 446, 1119, 1443
CfoI GCGC 1 cut(s) 664
Cfr10I RCCGGY 2 cut(s) 220, 1153
Cfr13I GGNCC 4 cut(s) 170, 218, 241, 389
Cfr9I CCCGGG 1 cut(s) 1266
ClaI ATCGAT 1 cut(s) 1329
CseI GACGC 1 cut(s) 926
Csp6I GTAC 3 cut(s) 505, 1111, 1147
CspAI ACCGGT 1 cut(s) 220
CviAII CATG 8 cut(s) 464, 868, 942, 979, 993, 1061, 1211, 1442
CviQI GTAC 3 cut(s) 505, 1111, 1147
DdeI CTNAG 2 cut(s) 535, 740
DpnI GATC 4 cut(s) 74, 518, 1253, 1281
DpnII GATC 4 cut(s) 72, 516, 1251, 1279
EaeI YGGCCR 1 cut(s) 948
Eam1104I CTCTTC 1 cut(s) 1410
EarI CTCTTC 1 cut(s) 1410
EciI GGCGGA 1 cut(s) 241
Ecl136II GAGCTC 1 cut(s) 1354
Eco130I CCWWGG 4 cut(s) 366, 978, 1029, 1425
Eco24I GRGCYC 1 cut(s) 1356
Eco32I GATATC 1 cut(s) 1327
Eco47I GGWCC 3 cut(s) 170, 218, 389
Eco53kI GAGCTC 1 cut(s) 1354
Eco88I CYCGRG 3 cut(s) 173, 1266, 1496
EcoICRI GAGCTC 1 cut(s) 1354
EcoNI CCTNNNNNAGG 1 cut(s) 144
EcoO109I RGGNCCY 1 cut(s) 170
EcoRI GAATTC 1 cut(s) 5
EcoRII CCWGG 2 cut(s) 1104, 1387
EcoRV GATATC 1 cut(s) 1327
EcoT14I CCWWGG 4 cut(s) 366, 978, 1029, 1425
EcoT38I GRGCYC 1 cut(s) 1356
ErhI CCWWGG 4 cut(s) 366, 978, 1029, 1425
FaeI CATG 8 cut(s) 467, 871, 945, 982, 996, 1064, 1214, 1445
FalI AAGNNNNNCTT 4 cut(s) 275, 307, 605, 637
FaqI GGGAC 2 cut(s) 309, 1199
FatI CATG 8 cut(s) 463, 867, 941, 978, 992, 1060, 1210, 1441
FbaI TGATCA 1 cut(s) 72
FblI GTMKAC 1 cut(s) 1375
Fnu4HI GCNGC 7 cut(s) 96, 99, 279, 455, 665, 1139, 1473
FokI GGATG 4 cut(s) 140, 147, 737, 884
FriOI GRGCYC 1 cut(s) 1356
Fsp4HI GCNGC 7 cut(s) 96, 99, 279, 455, 665, 1139, 1473
FspBI CTAG 6 cut(s) 90, 749, 797, 1052, 1079, 1431
GlaI GCGC 1 cut(s) 663
GluI GCNGC 7 cut(s) 96, 99, 279, 455, 665, 1139, 1473
GsaI CCCAGC 1 cut(s) 963
GsuI CTGGAG 3 cut(s) 470, 1127, 1446
HaeIII GGCC 4 cut(s) 139, 243, 852, 950
HapII CCGG 5 cut(s) 221, 1154, 1267, 1298, 1488
HgaI GACGC 1 cut(s) 926
HhaI GCGC 1 cut(s) 664
Hin1II CATG 8 cut(s) 467, 871, 945, 982, 996, 1064, 1214, 1445
Hin6I GCGC 1 cut(s) 662
HinP1I GCGC 1 cut(s) 662
HincII GTYRAC 2 cut(s) 931, 1422
HindII GTYRAC 2 cut(s) 931, 1422
HinfI GANTC 3 cut(s) 42, 1088, 1530
HpaI GTTAAC 1 cut(s) 1422
HpaII CCGG 5 cut(s) 221, 1154, 1267, 1298, 1488
HphI GGTGA 3 cut(s) 286, 994, 1045
Hpy166II GTNNAC 4 cut(s) 208, 931, 1376, 1422
Hpy188I TCNGA 4 cut(s) 478, 1093, 1284, 1555
Hpy188III TCNNGA 4 cut(s) 90, 537, 1043, 1463
Hpy8I GTNNAC 4 cut(s) 208, 931, 1376, 1422
Hpy99I CGWCG 1 cut(s) 653
HpyAV CCTTC 8 cut(s) 115, 277, 490, 553, 652, 784, 1068, 1330
HpyCH4III ACNGT 5 cut(s) 513, 928, 1022, 1259, 1419
HpyCH4IV ACGT 3 cut(s) 627, 678, 1509
HpyCH4V TGCA 4 cut(s) 1117, 1194, 1441, 1472
HpyF10VI GCNNNNNNNGC 5 cut(s) 371, 454, 745, 956, 1191
HpyF3I CTNAG 2 cut(s) 535, 740
HpySE526I ACGT 3 cut(s) 627, 678, 1509
Hsp92II CATG 8 cut(s) 467, 871, 945, 982, 996, 1064, 1214, 1445
HspAI GCGC 1 cut(s) 662
Ksp22I TGATCA 1 cut(s) 72
KspAI GTTAAC 1 cut(s) 1422
Kzo9I GATC 4 cut(s) 72, 516, 1251, 1279
LguI GCTCTTC 1 cut(s) 1410
LmnI GCTCC 6 cut(s) 362, 451, 793, 826, 896, 1491
Lsp1109I GCAGC 5 cut(s) 82, 85, 441, 1125, 1484
LweI GCATC 1 cut(s) 715
MaeI CTAG 6 cut(s) 90, 749, 797, 1052, 1079, 1431
MaeII ACGT 3 cut(s) 627, 678, 1509
MaeIII GTNAC 6 cut(s) 968, 982, 1022, 1100, 1259, 1340
MalI GATC 4 cut(s) 74, 518, 1253, 1281
MboI GATC 4 cut(s) 72, 516, 1251, 1279
MboII GAAGA 7 cut(s) 613, 792, 852, 1058, 1117, 1261, 1397
MflI RGATCY 1 cut(s) 1251
MhlI GDGCHC 5 cut(s) 153, 765, 831, 1000, 1356
MluCI AATT 5 cut(s) 5, 265, 543, 1178, 1345
MlyI GAGTC 1 cut(s) 1539
MmeI TCCRAC 1 cut(s) 801
MseI TTAA 2 cut(s) 1293, 1421
MslI CAYNNNNRTG 5 cut(s) 56, 236, 977, 1031, 1446
MspA1I CMGCKG 1 cut(s) 1475
MspI CCGG 5 cut(s) 221, 1154, 1267, 1298, 1488
MspR9I CCNGG 5 cut(s) 1106, 1267, 1268, 1389, 1489
MvaI CCWGG 2 cut(s) 1106, 1389
MvnI CGCG 1 cut(s) 664
MwoI GCNNNNNNNGC 5 cut(s) 371, 454, 745, 956, 1191
NciI CCSGG 3 cut(s) 1267, 1268, 1489
NcoI CCATGG 1 cut(s) 978
NdeII GATC 4 cut(s) 72, 516, 1251, 1279
NlaIII CATG 8 cut(s) 467, 871, 945, 982, 996, 1064, 1214, 1445
NlaIV GGNNCC 5 cut(s) 172, 364, 671, 1158, 1493
NmuCI GTSAC 5 cut(s) 968, 982, 1022, 1259, 1340
NspI RCATGY 4 cut(s) 467, 945, 1064, 1445
NspV TTCGAA 1 cut(s) 598
OliI CACNNNNGTG 1 cut(s) 1031
PaeI GCATGC 1 cut(s) 1445
PciI ACATGT 2 cut(s) 463, 941
PciSI GCTCTTC 1 cut(s) 1410
PfeI GAWTC 2 cut(s) 42, 1088
PflMI CCANNNNNTGG 2 cut(s) 163, 1166
PinAI ACCGGT 1 cut(s) 220
PkrI GCNGC 7 cut(s) 97, 100, 280, 456, 666, 1140, 1474
PleI GAGTC 1 cut(s) 1538
PpsI GAGTC 1 cut(s) 1538
PpuMI RGGWCCY 1 cut(s) 170
PscI ACATGT 2 cut(s) 463, 941
Psp124BI GAGCTC 1 cut(s) 1356
Psp1406I AACGTT 1 cut(s) 627
Psp5II RGGWCCY 1 cut(s) 170
Psp6I CCWGG 2 cut(s) 1104, 1387
PspFI CCCAGC 1 cut(s) 959
PspGI CCWGG 2 cut(s) 1104, 1387
PspN4I GGNNCC 5 cut(s) 172, 364, 671, 1158, 1493
PspPI GGNCC 4 cut(s) 170, 218, 241, 389
PspPPI RGGWCCY 1 cut(s) 170
PsuI RGATCY 1 cut(s) 1251
PvuII CAGCTG 1 cut(s) 1475
RsaI GTAC 3 cut(s) 506, 1112, 1148
RsaNI GTAC 3 cut(s) 505, 1111, 1147
RseI CAYNNNNRTG 5 cut(s) 56, 236, 977, 1031, 1446
SacI GAGCTC 1 cut(s) 1356
SapI GCTCTTC 1 cut(s) 1410
SaqAI TTAA 2 cut(s) 1293, 1421
SatI GCNGC 7 cut(s) 96, 99, 279, 455, 665, 1139, 1473
Sau3AI GATC 4 cut(s) 72, 516, 1251, 1279
Sau96I GGNCC 4 cut(s) 170, 218, 241, 389
ScaI AGTACT 1 cut(s) 1112
SchI GAGTC 1 cut(s) 1539
ScrFI CCNGG 5 cut(s) 1106, 1267, 1268, 1389, 1489
SduI GDGCHC 5 cut(s) 153, 765, 831, 1000, 1356
SfaNI GCATC 1 cut(s) 715
SfuI TTCGAA 1 cut(s) 598
SinI GGWCC 3 cut(s) 170, 218, 389
SmaI CCCGGG 1 cut(s) 1268
SmiMI CAYNNNNRTG 5 cut(s) 56, 236, 977, 1031, 1446
SmlI CTYRAG 3 cut(s) 349, 846, 1041
SmoI CTYRAG 3 cut(s) 349, 846, 1041
SphI GCATGC 1 cut(s) 1445
Sse9I AATT 5 cut(s) 5, 265, 543, 1178, 1345
SsiI CCGC 4 cut(s) 252, 278, 664, 667
SspI AATATT 1 cut(s) 1561
SspMI CTAG 6 cut(s) 90, 749, 797, 1052, 1079, 1431
SstI GAGCTC 1 cut(s) 1356
StyD4I CCNGG 5 cut(s) 1104, 1265, 1266, 1387, 1487
StyI CCWWGG 4 cut(s) 366, 978, 1029, 1425
TaaI ACNGT 5 cut(s) 513, 928, 1022, 1259, 1419
TaiI ACGT 3 cut(s) 630, 681, 1512
TaqI TCGA 4 cut(s) 469, 598, 1329, 1528
TasI AATT 5 cut(s) 5, 265, 543, 1178, 1345
TatI WGTACW 2 cut(s) 504, 1110
TauI GCSGC 2 cut(s) 281, 667
TfiI GAWTC 2 cut(s) 42, 1088
Tru1I TTAA 2 cut(s) 1293, 1421
Tru9I TTAA 2 cut(s) 1293, 1421
TscAI CASTG 2 cut(s) 973, 1264
TseFI GTSAC 5 cut(s) 968, 982, 1022, 1259, 1340
TseI GCWGC 5 cut(s) 95, 98, 454, 1138, 1472
Tsp45I GTSAC 5 cut(s) 968, 982, 1022, 1259, 1340
TspDTI ATGAA 6 cut(s) 572, 647, 686, 856, 1101, 1253
TspGWI ACGGA 4 cut(s) 375, 381, 424, 723
TspMI CCCGGG 1 cut(s) 1266
TspRI CASTG 2 cut(s) 973, 1264
Van91I CCANNNNNTGG 2 cut(s) 163, 1166
VpaK11BI GGWCC 3 cut(s) 170, 218, 389
XagI CCTNNNNNAGG 1 cut(s) 144
XapI RAATTY 3 cut(s) 5, 543, 1178
XbaI TCTAGA 1 cut(s) 89
XceI RCATGY 4 cut(s) 467, 945, 1064, 1445
XcmI CCANNNNNNNNNTGG 2 cut(s) 304, 1224
XmaI CCCGGG 1 cut(s) 1266
XmiI GTMKAC 1 cut(s) 1375
XspI CTAG 6 cut(s) 90, 749, 797, 1052, 1079, 1431
ZrmI AGTACT 1 cut(s) 1112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.