RLG00000011387

homogentisate phytyltransferase 1, chloroplastic-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0017256
Physical Location & Seq
Reverse (-)
9044306 .. 9048166
3861 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000011387

Sequence Viewer

Length: 1446 bp
ATGCCCCTCCTTCAAGTAGTAGCGCCGGCGCCAGTGAAGCTAAGACAGTGCAACTTATTAATCAAGAACAAAAGCAACAAGCCATTGCCCTTCCCTTCCCTGCAGCCACATTATCGTTATTATTATTCATCATCTTTAGGCGGCAGCATTGTTACTGCCAATGCAAATCCAAACTGTGGTGATCGGCAAATCTCAGTAACCAAAAGAAGAGGAGAACATGGTCGTAAAAACCATAGCGAGGCAACGTTGTCCTATGCCTCACAATCACGATCAGAGAAGATCGATGTTAATATTGATGGACAATTCCTGAATAGATTTCAGATTGGCGGCGGCTTTTCTAAACAATGGGACGCTTTTCATCGCTTTTGTCGTCCTCATACTGTAATCGGCACTGTTATAGGTATATTATCCGTCTCTCTTCTTCCATTGGAACAAACTGGGGACTTGTCTCCTGCATTTTTTATAGGAATACTGAAGGCATTGGTTCCCTCGGTGTTAATGAACATCTATGTGGTGGGACTGAATCAAGTGTTTGATGTCGAAATAGACAAGGTTAACAAACCTGATCTCCCACTAGCTTCTGGTGAATTCTCTATGGGAACTGGGATCACAATCGTTTCCACAGTTTTGCTGATGAGTTTTGCCATGGGAGTTATGTTCAAGTCTCCACCTCTGTTCTCTGCCCTTGCCATTAGCTTTTTTCTTGGAAGTGCTTATTCCATTGAGCTTCCGCTGCTCAGGTGGAAGAGACATGCAATTCTTGCTGCTGCTTGCATCCTAATTGTGAGAGCTGTCGTCGTCCAGCTTGCCTTCTTTGTACACATCCAGAAGTATGTGCTTGGTAGAGAAATTTCAATTACAAGACCATTGGTATTTGCAGTGGTTTTCATGTGCATCTTCTCCTCTGTTATTGCGTTGTTCAAGGATATACCTGATGTGGATGGTGATAGAGATTTTGGTATCCAATCTTTCAGTGTCAGCCTTGGGCAAGAAAAGGTGTATTGGGTTTGTGTAAATATGTTGTTACTGGCATATGGGGCAGCAGTGGTGATAGGAGCCTCTTCTTCCTCCCTACCAAGCAAGGTTTTCACTATAATAGGTCATGGTGCACTGGCTTCCCTTCTGTGGCTTCGAGCTCAATCAACAGACATAGCCAATAAAGCCTCCCTAACTTCTTTTTACATGTTCATTTGGAAGTTGTTATTAGGGTTTCTGCCGTTCTCCCTCCTCTCAACCGTCGCCGCGGAGCAGCCAAGCCAAGCCAAGCCAAGGAAGAAGAAGAAGATCAAGATGCCTTCACACAAGACCTTGATCATCAAGAAGAAGCTTGGCAAGAAGATAAGGCAGAACAGGCCCATCCCTCACTGGATCCGTCTCAGGACTGACAACAAAATCAGGTACAATGCTAAGCGCAGGCACTGGCGCCGCACCAAGCTCGGGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00130 ko01100 ko01110 map00130 map01100 map01110
Pfam Domains
Protein Families
UbiA

Protein Analysis

482

Amino Acids

53.59

Weight (kDa)

10.23

Isoelectric Point (pI)

50.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UbiA PF01040 141 - 400 1.4e-37 UbiA prenyltransferase family
Ribosomal_L39 PF00832 439 - 479 4.4e-20 Ribosomal L39 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0017256)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g40790
malus_domestica MD08G1060100.v1.1
prunus_persica Prupe.1G390700_v2.0.a1
pyrus_communis pycom08g05010
rosa_chinensis RchiOBHm_Chr6g0299791
rosa_laevigata RLG00000011387
rosa_roxburghii Rroxscaffold_7G00168360
rosa_rugosa Rorug06G0292300
rosa_samantha Rh6AG403400 Rh6BG411800 Rh6CG417900 Rh6DG404700
rosa_wichuraiana Rw6G035300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 28, 1422
AccB7I CCANNNNNTGG 1 cut(s) 176
AccII CGCG 1 cut(s) 1244
AciI CCGC 7 cut(s) 141, 327, 330, 731, 1242, 1244, 1426
AclI AACGTT 1 cut(s) 245
AclWI GGATC 3 cut(s) 614, 1363, 1376
AcsI RAATTY 2 cut(s) 587, 849
AcuI CTGAAG 1 cut(s) 494
AcyI GRCGYC 2 cut(s) 29, 1423
AfaI GTAC 2 cut(s) 819, 1400
AfiI CCNNNNNNNGG 5 cut(s) 176, 238, 1125, 1269, 1437
AflIII ACRYGT 1 cut(s) 1182
AgsI TTSAA 4 cut(s) 14, 661, 855, 922
AluBI AGCT 9 cut(s) 40, 578, 696, 727, 791, 805, 1136, 1327, 1435
AluI AGCT 9 cut(s) 40, 578, 696, 727, 791, 805, 1136, 1327, 1435
Alw21I GWGCWC 2 cut(s) 1111, 1138
Alw26I GTCTC 5 cut(s) 418, 453, 669, 742, 1379
Alw44I GTGCAC 1 cut(s) 1107
AlwI GGATC 3 cut(s) 614, 1363, 1376
AlwNI CAGNNNCTG 1 cut(s) 1419
Ama87I CYCGRG 1 cut(s) 1436
AoxI GGCC 1 cut(s) 1352
ApaLI GTGCAC 1 cut(s) 1107
ApeKI GCWGC 7 cut(s) 103, 144, 733, 764, 767, 1040, 1249
ApoI RAATTY 2 cut(s) 587, 849
AseI ATTAAT 1 cut(s) 59
AspLEI GCGC 4 cut(s) 25, 31, 1413, 1425
AspS9I GGNCC 1 cut(s) 1353
AsuHPI GGTGA 4 cut(s) 191, 596, 956, 1060
AvaI CYCGRG 1 cut(s) 1436
BaeGI GKGCMC 1 cut(s) 1111
BamHI GGATCC 1 cut(s) 1368
BanI GGYRCC 2 cut(s) 28, 1422
BanII GRGCYC 1 cut(s) 1138
Bbv12I GWGCWC 2 cut(s) 1111, 1138
BbvI GCAGC 7 cut(s) 115, 156, 720, 751, 754, 1052, 1261
BccI CCATC 3 cut(s) 290, 935, 1364
BceAI ACGGC 1 cut(s) 1201
BcgI CGANNNNNNTGC 1 cut(s) 1417
BciVI GTATCC 1 cut(s) 971
BclI TGATCA 1 cut(s) 1311
BcoDI GTCTC 5 cut(s) 418, 453, 669, 742, 1379
BfaI CTAG 1 cut(s) 575
BfmI CTRYAG 1 cut(s) 101
BfoI RGCGCY 3 cut(s) 26, 32, 1426
BfuI GTATCC 1 cut(s) 971
BlpI GCTNAGC 1 cut(s) 1407
BmeT110I CYCGRG 1 cut(s) 1436
BmgT120I GGNCC 1 cut(s) 1353
BmiI GGNNCC 5 cut(s) 30, 486, 1057, 1370, 1424
BmrI ACTGGG 2 cut(s) 447, 612
BmsI GCATC 3 cut(s) 783, 903, 1281
BmuI ACTGGG 2 cut(s) 447, 612
Bpu10I CCTNAGC 1 cut(s) 737
Bpu1102I GCTNAGC 1 cut(s) 1407
Bsa29I ATCGAT 1 cut(s) 282
BsaBI GATNNNNATC 1 cut(s) 611
BsaHI GRCGYC 2 cut(s) 29, 1423
BsaJI CCNNGG 5 cut(s) 489, 645, 982, 1242, 1268
BsaXI ACNNNNNCTCC 2 cut(s) 552, 582
Bsc4I CCNNNNNNNGG 5 cut(s) 176, 238, 1125, 1269, 1437
Bse118I RCCGGY 1 cut(s) 25
Bse1I ACTGG 7 cut(s) 32, 442, 607, 1032, 1116, 1370, 1424
Bse3DI GCAATG 1 cut(s) 83
Bse8I GATNNNNATC 1 cut(s) 611
BseCI ATCGAT 1 cut(s) 282
BseDI CCNNGG 5 cut(s) 489, 645, 982, 1242, 1268
BseGI GGATG 4 cut(s) 774, 822, 946, 1356
BseJI GATNNNNATC 1 cut(s) 611
BseLI CCNNNNNNNGG 5 cut(s) 176, 238, 1125, 1269, 1437
BseMI GCAATG 1 cut(s) 83
BseMII CTCAG 3 cut(s) 207, 751, 1390
BseNI ACTGG 7 cut(s) 32, 442, 607, 1032, 1116, 1370, 1424
BseRI GAGGAG 3 cut(s) 225, 892, 1217
BseSI GKGCMC 1 cut(s) 1111
BseXI GCAGC 7 cut(s) 115, 156, 720, 751, 754, 1052, 1261
Bsh1236I CGCG 1 cut(s) 1244
BshFI GGCC 1 cut(s) 1354
BshNI GGYRCC 2 cut(s) 28, 1422
BshVI ATCGAT 1 cut(s) 282
BsiHKAI GWGCWC 2 cut(s) 1111, 1138
BsiHKCI CYCGRG 1 cut(s) 1436
BsiSI CCGG 1 cut(s) 26
BslFI GGGAC 3 cut(s) 362, 455, 531
BslI CCNNNNNNNGG 5 cut(s) 176, 238, 1125, 1269, 1437
BsmAI GTCTC 5 cut(s) 418, 453, 669, 742, 1379
BsmBI CGTCTC 2 cut(s) 418, 1379
BsmFI GGGAC 3 cut(s) 362, 455, 531
BsnI GGCC 1 cut(s) 1354
BsoBI CYCGRG 1 cut(s) 1436
Bsp1286I GDGCHC 2 cut(s) 1111, 1138
Bsp1407I TGTACA 1 cut(s) 817
Bsp143I GATC 8 cut(s) 181, 269, 279, 565, 606, 1284, 1311, 1368
Bsp1720I GCTNAGC 1 cut(s) 1407
Bsp19I CCATGG 1 cut(s) 645
BspACI CCGC 7 cut(s) 141, 327, 330, 731, 1242, 1244, 1426
BspANI GGCC 1 cut(s) 1354
BspCNI CTCAG 3 cut(s) 206, 750, 1389
BspDI ATCGAT 1 cut(s) 282
BspFNI CGCG 1 cut(s) 1244
BspLI GGNNCC 5 cut(s) 30, 486, 1057, 1370, 1424
BspMAI CTGCAG 1 cut(s) 105
BspPI GGATC 3 cut(s) 614, 1363, 1376
BspT107I GGYRCC 2 cut(s) 28, 1422
BsrDI GCAATG 1 cut(s) 83
BsrFI RCCGGY 1 cut(s) 25
BsrGI TGTACA 1 cut(s) 817
BsrI ACTGG 7 cut(s) 32, 442, 607, 1032, 1116, 1370, 1424
BssAI RCCGGY 1 cut(s) 25
BssECI CCNNGG 5 cut(s) 489, 645, 982, 1242, 1268
BssMI GATC 8 cut(s) 181, 269, 279, 565, 606, 1284, 1311, 1368
BssNI GRCGYC 2 cut(s) 29, 1423
BssT1I CCWWGG 3 cut(s) 645, 982, 1268
Bst4CI ACNGT 6 cut(s) 48, 176, 382, 394, 625, 1237
Bst6I CTCTTC 4 cut(s) 202, 423, 740, 1066
BstACI GRCGYC 2 cut(s) 29, 1423
BstAPI GCANNNNNTGC 1 cut(s) 761
BstAUI TGTACA 1 cut(s) 817
BstC8I GCNNGC 4 cut(s) 27, 772, 807, 1415
BstDEI CTNAG 5 cut(s) 41, 193, 737, 1376, 1407
BstDSI CCRYGG 2 cut(s) 645, 1242
BstF5I GGATG 4 cut(s) 774, 822, 946, 1356
BstFNI CGCG 1 cut(s) 1244
BstH2I RGCGCY 3 cut(s) 26, 32, 1426
BstHHI GCGC 4 cut(s) 25, 31, 1413, 1425
BstKTI GATC 8 cut(s) 184, 272, 282, 568, 609, 1287, 1314, 1371
BstMAI GTCTC 5 cut(s) 418, 453, 669, 742, 1379
BstMBI GATC 8 cut(s) 181, 269, 279, 565, 606, 1284, 1311, 1368
BstMWI GCNNNNNNNGC 6 cut(s) 37, 733, 761, 1037, 1160, 1351
BstNSI RCATGY 2 cut(s) 755, 1186
BstSFI CTRYAG 1 cut(s) 101
BstSLI GKGCMC 1 cut(s) 1111
BstUI CGCG 1 cut(s) 1244
BstV1I GCAGC 7 cut(s) 115, 156, 720, 751, 754, 1052, 1261
BstX2I RGATCY 1 cut(s) 1368
BstYI RGATCY 1 cut(s) 1368
Bsu15I ATCGAT 1 cut(s) 282
BsuI GTATCC 1 cut(s) 971
BsuRI GGCC 1 cut(s) 1354
BsuTUI ATCGAT 1 cut(s) 282
BtgI CCRYGG 2 cut(s) 645, 1242
BtgZI GCGATG 1 cut(s) 344
BtsCI GGATG 4 cut(s) 774, 822, 946, 1356
BtsI GCAGTG 2 cut(s) 885, 1050
BtsIMutI CAGTG 9 cut(s) 39, 53, 390, 885, 979, 1050, 1109, 1363, 1417
Cac8I GCNNGC 4 cut(s) 27, 772, 807, 1415
CaiI CAGNNNCTG 1 cut(s) 1419
CfoI GCGC 4 cut(s) 25, 31, 1413, 1425
Cfr10I RCCGGY 1 cut(s) 25
Cfr13I GGNCC 1 cut(s) 1353
Cfr42I CCGCGG 1 cut(s) 1245
ClaI ATCGAT 1 cut(s) 282
CseI GACGC 1 cut(s) 359
Csp6I GTAC 2 cut(s) 818, 1399
CviAII CATG 6 cut(s) 218, 646, 752, 889, 1103, 1183
CviQI GTAC 2 cut(s) 818, 1399
DdeI CTNAG 5 cut(s) 41, 193, 737, 1376, 1407
DinI GGCGCC 2 cut(s) 30, 1424
DpnI GATC 8 cut(s) 183, 271, 281, 567, 608, 1286, 1313, 1370
DpnII GATC 8 cut(s) 181, 269, 279, 565, 606, 1284, 1311, 1368
Eam1104I CTCTTC 4 cut(s) 202, 423, 740, 1066
EarI CTCTTC 4 cut(s) 202, 423, 740, 1066
Ecl136II GAGCTC 1 cut(s) 1136
Eco130I CCWWGG 3 cut(s) 645, 982, 1268
Eco24I GRGCYC 1 cut(s) 1138
Eco53kI GAGCTC 1 cut(s) 1136
Eco57I CTGAAG 1 cut(s) 494
Eco88I CYCGRG 1 cut(s) 1436
EcoICRI GAGCTC 1 cut(s) 1136
EcoRI GAATTC 1 cut(s) 587
EcoT14I CCWWGG 3 cut(s) 645, 982, 1268
EcoT38I GRGCYC 1 cut(s) 1138
EgeI GGCGCC 2 cut(s) 30, 1424
EheI GGCGCC 2 cut(s) 30, 1424
ErhI CCWWGG 3 cut(s) 645, 982, 1268
Esp3I CGTCTC 2 cut(s) 418, 1379
FaeI CATG 6 cut(s) 221, 649, 755, 892, 1106, 1186
FaqI GGGAC 3 cut(s) 362, 455, 531
FatI CATG 6 cut(s) 217, 645, 751, 888, 1102, 1182
FauNDI CATATG 1 cut(s) 1033
FbaI TGATCA 1 cut(s) 1311
FokI GGATG 4 cut(s) 761, 809, 953, 1343
FriOI GRGCYC 1 cut(s) 1138
FspBI CTAG 1 cut(s) 575
GlaI GCGC 4 cut(s) 24, 30, 1412, 1424
HaeII RGCGCY 3 cut(s) 26, 32, 1426
HaeIII GGCC 1 cut(s) 1354
HapII CCGG 1 cut(s) 26
HgaI GACGC 1 cut(s) 359
HhaI GCGC 4 cut(s) 25, 31, 1413, 1425
Hin1I GRCGYC 2 cut(s) 29, 1423
Hin1II CATG 6 cut(s) 221, 649, 755, 892, 1106, 1186
Hin6I GCGC 4 cut(s) 23, 29, 1411, 1423
HinP1I GCGC 4 cut(s) 23, 29, 1411, 1423
HincII GTYRAC 1 cut(s) 556
HindII GTYRAC 1 cut(s) 556
HindIII AAGCTT 1 cut(s) 1325
HinfI GANTC 1 cut(s) 523
HpaI GTTAAC 1 cut(s) 556
HpaII CCGG 1 cut(s) 26
HphI GGTGA 4 cut(s) 191, 596, 956, 1060
Hpy166II GTNNAC 3 cut(s) 556, 820, 1109
Hpy188I TCNGA 2 cut(s) 274, 321
Hpy188III TCNNGA 7 cut(s) 64, 267, 307, 826, 1288, 1318, 1378
Hpy8I GTNNAC 3 cut(s) 556, 820, 1109
Hpy99I CGWCG 2 cut(s) 800, 1241
HpyAV CCTTC 7 cut(s) 20, 100, 105, 469, 820, 1130, 1305
HpyCH4III ACNGT 6 cut(s) 48, 176, 382, 394, 625, 1237
HpyCH4IV ACGT 1 cut(s) 245
HpyCH4V TGCA 9 cut(s) 51, 103, 164, 455, 755, 774, 878, 894, 1109
HpyF10VI GCNNNNNNNGC 6 cut(s) 37, 733, 761, 1037, 1160, 1351
HpyF3I CTNAG 5 cut(s) 41, 193, 737, 1376, 1407
HpySE526I ACGT 1 cut(s) 245
Hsp92I GRCGYC 2 cut(s) 29, 1423
Hsp92II CATG 6 cut(s) 221, 649, 755, 892, 1106, 1186
HspAI GCGC 4 cut(s) 23, 29, 1411, 1423
KasI GGCGCC 2 cut(s) 28, 1422
KroI GCCGGC 1 cut(s) 25
KroNI GCCGGC 1 cut(s) 27
Ksp22I TGATCA 1 cut(s) 1311
KspAI GTTAAC 1 cut(s) 556
KspI CCGCGG 1 cut(s) 1245
Kzo9I GATC 8 cut(s) 181, 269, 279, 565, 606, 1284, 1311, 1368
LmnI GCTCC 2 cut(s) 1055, 1246
Lsp1109I GCAGC 7 cut(s) 115, 156, 720, 751, 754, 1052, 1261
LweI GCATC 3 cut(s) 783, 903, 1281
MaeI CTAG 1 cut(s) 575
MaeII ACGT 1 cut(s) 245
MaeIII GTNAC 3 cut(s) 151, 196, 1023
MalI GATC 8 cut(s) 183, 271, 281, 567, 608, 1286, 1313, 1370
MboI GATC 8 cut(s) 181, 269, 279, 565, 606, 1284, 1311, 1368
MflI RGATCY 1 cut(s) 1368
MhlI GDGCHC 2 cut(s) 1111, 1138
MluCI AATT 6 cut(s) 302, 587, 756, 780, 849, 855
Mly113I GGCGCC 2 cut(s) 29, 1423
MreI CGCCGGCG 1 cut(s) 25
MroNI GCCGGC 1 cut(s) 25
MseI TTAA 4 cut(s) 59, 288, 497, 555
MslI CAYNNNNRTG 1 cut(s) 509
MspA1I CMGCKG 2 cut(s) 733, 1244
MspI CCGG 1 cut(s) 26
MvnI CGCG 1 cut(s) 1244
MwoI GCNNNNNNNGC 6 cut(s) 37, 733, 761, 1037, 1160, 1351
NaeI GCCGGC 1 cut(s) 27
NarI GGCGCC 2 cut(s) 29, 1423
NcoI CCATGG 1 cut(s) 645
NdeI CATATG 1 cut(s) 1033
NdeII GATC 8 cut(s) 181, 269, 279, 565, 606, 1284, 1311, 1368
NgoMIV GCCGGC 1 cut(s) 25
NlaIII CATG 6 cut(s) 221, 649, 755, 892, 1106, 1186
NlaIV GGNNCC 5 cut(s) 30, 486, 1057, 1370, 1424
NspI RCATGY 2 cut(s) 755, 1186
PciI ACATGT 1 cut(s) 1182
PcsI WCGNNNNNNNCGW 1 cut(s) 367
PdiI GCCGGC 1 cut(s) 27
PfeI GAWTC 1 cut(s) 523
PflMI CCANNNNNTGG 1 cut(s) 176
PluTI GGCGCC 2 cut(s) 32, 1426
PscI ACATGT 1 cut(s) 1182
PshBI ATTAAT 1 cut(s) 59
Psp124BI GAGCTC 1 cut(s) 1138
Psp1406I AACGTT 1 cut(s) 245
PspN4I GGNNCC 5 cut(s) 30, 486, 1057, 1370, 1424
PspPI GGNCC 1 cut(s) 1353
PstI CTGCAG 1 cut(s) 105
PstNI CAGNNNCTG 1 cut(s) 1419
PsuI RGATCY 1 cut(s) 1368
RsaI GTAC 2 cut(s) 819, 1400
RsaNI GTAC 2 cut(s) 818, 1399
RseI CAYNNNNRTG 1 cut(s) 509
SacI GAGCTC 1 cut(s) 1138
SacII CCGCGG 1 cut(s) 1245
SaqAI TTAA 4 cut(s) 59, 288, 497, 555
Sau3AI GATC 8 cut(s) 181, 269, 279, 565, 606, 1284, 1311, 1368
Sau96I GGNCC 1 cut(s) 1353
SduI GDGCHC 2 cut(s) 1111, 1138
SfaNI GCATC 3 cut(s) 783, 903, 1281
SfcI CTRYAG 1 cut(s) 101
SfoI GGCGCC 2 cut(s) 30, 1424
Sfr303I CCGCGG 1 cut(s) 1245
SgrAI CRCCGGYG 1 cut(s) 25
SgrBI CCGCGG 1 cut(s) 1245
SmiMI CAYNNNNRTG 1 cut(s) 509
Sse9I AATT 6 cut(s) 302, 587, 756, 780, 849, 855
SsiI CCGC 7 cut(s) 141, 327, 330, 731, 1242, 1244, 1426
SspDI GGCGCC 2 cut(s) 28, 1422
SspI AATATT 1 cut(s) 292
SspMI CTAG 1 cut(s) 575
SstI GAGCTC 1 cut(s) 1138
StyI CCWWGG 3 cut(s) 645, 982, 1268
TaaI ACNGT 6 cut(s) 48, 176, 382, 394, 625, 1237
TaiI ACGT 1 cut(s) 248
TaqI TCGA 3 cut(s) 282, 540, 1132
TasI AATT 6 cut(s) 302, 587, 756, 780, 849, 855
TatI WGTACW 1 cut(s) 817
TauI GCSGC 5 cut(s) 144, 330, 333, 1244, 1428
TfiI GAWTC 1 cut(s) 523
Tru1I TTAA 4 cut(s) 59, 288, 497, 555
Tru9I TTAA 4 cut(s) 59, 288, 497, 555
TscAI CASTG 9 cut(s) 39, 53, 397, 885, 979, 1050, 1116, 1370, 1424
TseI GCWGC 7 cut(s) 103, 144, 733, 764, 767, 1040, 1249
TspDTI ATGAA 5 cut(s) 117, 347, 515, 877, 1177
TspGWI ACGGA 2 cut(s) 400, 1361
TspRI CASTG 9 cut(s) 39, 53, 397, 885, 979, 1050, 1116, 1370, 1424
Van91I CCANNNNNTGG 1 cut(s) 176
VneI GTGCAC 1 cut(s) 1107
VspI ATTAAT 1 cut(s) 59
XapI RAATTY 2 cut(s) 587, 849
XceI RCATGY 2 cut(s) 755, 1186
XspI CTAG 1 cut(s) 575
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.