Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0011392

Physical Location & Seq

Genomic Coordinates Reverse (-)

21304085 .. 21308686

Gene Structure 4602 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000012684

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGGTAAAGAGAAGCAAAAAGAGCAAAAGCAAGAGAGTGCCTCTGAAGAAGAAGTACAAGGTGATAAGGAAGGTGAAGGAGCACCACAAGAAGAAGGCCAAGGACGCCAAGAAGCTCGGCTTCCAGCGCAAGAAGGTCGAGAGGGACCCAGGTATCCCTAACGACTGGCCCTTCAAGGAGCAGGAGCTCAAGGCCCTCGAAGCTCGCCGCGCTCGTGTCATCGATGAAATCGAGCAGAAGAAAGCTGCCCGCAAAGAAAGGGCTCAGAAGAGGAAGATGGGAGAGTTAGAGGAGGACGATGACGAGGACTCCAAGTTGGATGAAGTTCTAGAGGAAAAGAGTACTGATGATTCCATTGGGTTTGCTAAGAATAGGGATAGCTCAGATAGGGCTTTCTACAAGGAGTTGGTTAAAGTTATTGAAGCATCAGATGTCATTTTGGAGGTTCTTGATGCTCGAGATCCCCTGGGTACACGATGTGTTGATATGGAAAAGATGGTGAGGAAGTCGGGTCCTAATAAGCATCTTGTGTTACTTCTTAACAAAATCGATCTTATCCCGCGTGAAGCTGTTGAGAAGTGGCTCACTTATCTTAGGGAGGAGTTGCCAGCTGTTGCCTTCAAATGCAGCACCCAAGAACAAAAATCAAACTTAGGGTGGAAATCGTCCTCTAAAAAATCAAAACCTAGCAACCTTTTGCAGACAAGTGACTGTCTAGGAGCTGAAACTCTTCTTAAATTGTTGAAGAACTATTCAAGAAGTCATGAGATCAAGAAGTCGATTACAGTGGGTATTATTGGCCTACCTAATGTTGGTAAGAGTAGTCTCATTAACAGTTTGAAGAGATGCCGTGTCGTCAATGTTGGTTCCACTCCAGGGTTAACAAGATCACTACAAGAAGTCCAGTTGGATAATAATGTCAAATTGATAGATTGCCCTGGTGTTGTAATGCTCAAATCTACAGAAAATGATGCCTCTATAGCTCTTCGAAATTGCAAAAGAATTGAGAAGTTAGAGGATCCAATTGGTCCAGTGAGGGAAATTTTGAAGCTCTGCCCAGCCAGATTGTTGGTATCTATATACAAGCTCCCAAGCTTTGATACTGTTGATGACTTTCTGCAGAAGGTGGCTACTGTTAGGGGTAAGCTGAAAAAGGGTGGTGTTGTAGATATTGGAGCTGCAGCCAGAATTGTTCTGCATGACTGGAATGAGGGTAAAATTCCGTACTACACTATGCCCCCAGCTAGGAGTCAAGAAGAACCTTCAGAGGCAAAAATTGTTTCGAAGCTGGGCAAGGAGTTGAACATTGACGAAGTATACAATGGAGAATCTTCATTCATTGGAAGCCTCAAATCTGTTAATGATTTCCATCCTGTTGAAGTTCCTCCCAGTTGCCCACTCAATTTTGATGAGGATATGGAAGAGAATAAAAGACCATCAAGTCAAGCTGATGGAAGTCCTAAAGATATGGTTGATGAAGATGATGACCAGTCCATGGCAGTTGAAGAGGATGATTCAGGCAAGGCAAAAGAAAAGACGGCTACCAAAACTAGCAGGCAGAATGAGAAATTGTATGCAGCTGAAGGTATGCTTAATACAAGGAAGAAGAAAGCAGAGAAGAAGATGAGGAAAAAGGCCAAATCAGCTTCCACGGATGCTATGGAAGATGATTATGATTTTAAAGTTGATTACATCAAGAAGGGATCTGCCATGGATGTTGGTGATGGCATTGAGGGAAAAGATGACAATCAAATTATTGGAAAGGTACCTATGTCTGGTATTGGATTTGATGAACCAGAGGAAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0003924 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005911 GO:0006355 GO:0007275 GO:0008150 GO:0009506 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009908 GO:0010073 GO:0010074 GO:0010077 GO:0010154 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019219 GO:0019222 GO:0019827 GO:0022414 GO:0022613 GO:0030054 GO:0030856 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0042254 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045595 GO:0045604 GO:0045682 GO:0045892 GO:0045934 GO:0045995 GO:0048316 GO:0048366 GO:0048367 GO:0048437 GO:0048444 GO:0048507 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048825 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0055044 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071840 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0098727 GO:0099402 GO:1902679 GO:1903506 GO:1903507 GO:1905392 GO:2000024 GO:2000026 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

GN3L_Grn1 MMR_HSR1

Protein Analysis

603

Amino Acids

67.7

Weight (kDa)

8.88

Isoelectric Point (pI)

44.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GN3L_Grn1	PF08701	15 - 90	3e-18	GNL3L/Grn1 putative GTPase
MMR_HSR1	PF01926	262 - 325	1.8e-15	50S ribosome-binding GTPase
FeoB_N	PF02421	262 - 329	8.2e-09	Ferrous iron transport protein B

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011392)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07050
fragaria_vesca	FvH4_3g29200 FvH4_3g29200
malus_domestica	MD05G1177400.v1.1 MD10G1165800.v1.1
prunus_persica	Prupe.8G204300_v2.0.a1
pyrus_communis	pycom05g16330 pycom05g16380 pycom10g14300
rosa_chinensis	RchiOBHm_Chr6g0285031
rosa_laevigata	RLG00000012684
rosa_multiflora	Rmu_sc0002478.1_g000012
rosa_roxburghii	Rroxscaffold_7G00183820 Rroxscaffold_7G00184090
rosa_rugosa	Rorug06G0170100
rosa_samantha	Rh6AG281800 Rh6BG282400 Rh6CG284100 Rh6DG277300
rosa_wichuraiana	Rw6G024210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1440
Acc65I	GGTACC	1 cut(s)	1765
AccB1I	GGYRCC	1 cut(s)	1765
AccB7I	CCANNNNNTGG	1 cut(s)	1495
AccI	GTMKAC	1 cut(s)	1317
AccII	CGCG	2 cut(s)	210, 562
AciI	CCGC	3 cut(s)	208, 250, 560
AclWI	GGATC	4 cut(s)	455, 1013, 1026, 1711
AcsI	RAATTY	2 cut(s)	1041, 1218
AcuI	CTGAAG	3 cut(s)	65, 1248, 1602
AcyI	GRCGYC	1 cut(s)	105
AdeI	CACNNNGTG	1 cut(s)	479
AfaI	GTAC	5 cut(s)	56, 343, 472, 1226, 1767
AfiI	CCNNNNNNNGG	5 cut(s)	812, 876, 1245, 1495, 1775
AjnI	CCWGG	4 cut(s)	148, 465, 874, 937
Alw21I	GWGCWC	2 cut(s)	84, 189
Alw26I	GTCTC	1 cut(s)	830
AlwI	GGATC	4 cut(s)	455, 1013, 1026, 1711
Ama87I	CYCGRG	1 cut(s)	456
AoxI	GGCC	5 cut(s)	96, 167, 192, 799, 1635
ApeKI	GCWGC	5 cut(s)	245, 627, 1178, 1181, 1577
ApoI	RAATTY	2 cut(s)	1041, 1218
Asp700I	GAANNNNTTC	1 cut(s)	729
Asp718I	GGTACC	1 cut(s)	1765
AspLEI	GCGC	2 cut(s)	129, 212
AspS9I	GGNCC	5 cut(s)	145, 168, 193, 512, 1028
AsuHPI	GGTGA	4 cut(s)	73, 85, 511, 1733
AsuII	TTCGAA	2 cut(s)	988, 1283
AvaI	CYCGRG	1 cut(s)	456
AvaII	GGWCC	3 cut(s)	145, 512, 1028
BaeI	ACNNNNGTAYC	4 cut(s)	136, 169, 1757, 1790
BamHI	GGATCC	1 cut(s)	1018
BanI	GGYRCC	1 cut(s)	1765
BanII	GRGCYC	2 cut(s)	189, 265
BarI	GAAGNNNNNNTAC	2 cut(s)	38, 70
BauI	CACGAG	1 cut(s)	213
Bbv12I	GWGCWC	2 cut(s)	84, 189
BbvI	GCAGC	5 cut(s)	232, 639, 1165, 1193, 1589
BccI	CCATC	6 cut(s)	271, 490, 1377, 1444, 1445, 1718
BceAI	ACGGC	2 cut(s)	834, 1554
BcgI	CGANNNNNNTGC	2 cut(s)	118, 152
BciT130I	CCWGG	4 cut(s)	150, 467, 876, 939
BciVI	GTATCC	1 cut(s)	164
BcoDI	GTCTC	1 cut(s)	830
BfaI	CTAG	5 cut(s)	329, 687, 716, 1245, 1551
BfmI	CTRYAG	4 cut(s)	960, 978, 1118, 1179
BfuI	GTATCC	1 cut(s)	164
BisI	GCNGC	6 cut(s)	208, 246, 628, 1179, 1182, 1578
BlsI	GCNGC	6 cut(s)	209, 247, 629, 1180, 1183, 1579
BmcAI	AGTACT	1 cut(s)	343
Bme1390I	CCNGG	4 cut(s)	150, 467, 876, 939
Bme18I	GGWCC	3 cut(s)	145, 512, 1028
BmeT110I	CYCGRG	1 cut(s)	456
BmgT120I	GGNCC	5 cut(s)	145, 168, 193, 512, 1028
BmiI	GGNNCC	6 cut(s)	146, 147, 513, 868, 1020, 1767
BmrFI	CCNGG	4 cut(s)	150, 467, 876, 939
BmrI	ACTGGG	1 cut(s)	1383
BmsI	GCATC	6 cut(s)	434, 442, 532, 836, 961, 1645
BmuI	ACTGGG	1 cut(s)	1383
BplI	GAGNNNNNCTC	2 cut(s)	25, 57
BpmI	CTGGAG	1 cut(s)	858
Bpu14I	TTCGAA	2 cut(s)	988, 1283
BpuEI	CTTGAG	1 cut(s)	173
Bsa29I	ATCGAT	2 cut(s)	222, 549
BsaBI	GATNNNNATC	2 cut(s)	1368, 1746
BsaHI	GRCGYC	1 cut(s)	105
BsaJI	CCNNGG	9 cut(s)	99, 148, 465, 466, 875, 937, 1494, 1650, 1710
BsaXI	ACNNNNNCTCC	2 cut(s)	293, 323
Bsc4I	CCNNNNNNNGG	5 cut(s)	812, 876, 1245, 1495, 1775
Bse1I	ACTGG	6 cut(s)	170, 904, 1031, 1208, 1389, 1489
Bse8I	GATNNNNATC	2 cut(s)	1368, 1746
BseBI	CCWGG	4 cut(s)	150, 467, 876, 939
BseCI	ATCGAT	2 cut(s)	222, 549
BseDI	CCNNGG	9 cut(s)	99, 148, 465, 466, 875, 937, 1494, 1650, 1710
BseGI	GGATG	5 cut(s)	325, 1369, 1516, 1660, 1720
BseJI	GATNNNNATC	2 cut(s)	1368, 1746
BseLI	CCNNNNNNNGG	5 cut(s)	812, 876, 1245, 1495, 1775
BseMII	CTCAG	2 cut(s)	278, 396
BseNI	ACTGG	6 cut(s)	170, 904, 1031, 1208, 1389, 1489
BseRI	GAGGAG	2 cut(s)	305, 614
BseXI	GCAGC	5 cut(s)	232, 639, 1165, 1193, 1589
BseYI	CCCAGC	3 cut(s)	1057, 1240, 1288
Bsh1236I	CGCG	2 cut(s)	210, 562
BshFI	GGCC	5 cut(s)	98, 169, 194, 801, 1637
BshNI	GGYRCC	1 cut(s)	1765
BshVI	ATCGAT	2 cut(s)	222, 549
BsiHKAI	GWGCWC	2 cut(s)	84, 189
BsiHKCI	CYCGRG	1 cut(s)	456
BslFI	GGGAC	1 cut(s)	158
BslI	CCNNNNNNNGG	5 cut(s)	812, 876, 1245, 1495, 1775
BsmAI	GTCTC	1 cut(s)	830
BsmFI	GGGAC	1 cut(s)	158
BsnI	GGCC	5 cut(s)	98, 169, 194, 801, 1637
BsoBI	CYCGRG	1 cut(s)	456
Bsp119I	TTCGAA	2 cut(s)	988, 1283
Bsp1286I	GDGCHC	3 cut(s)	84, 189, 265
Bsp143I	GATC	6 cut(s)	460, 550, 768, 887, 1018, 1703
Bsp19I	CCATGG	2 cut(s)	1494, 1710
BspACI	CCGC	3 cut(s)	208, 250, 560
BspANI	GGCC	5 cut(s)	98, 169, 194, 801, 1637
BspCNI	CTCAG	2 cut(s)	277, 395
BspDI	ATCGAT	2 cut(s)	222, 549
BspFNI	CGCG	2 cut(s)	210, 562
BspHI	TCATGA	1 cut(s)	763
BspLI	GGNNCC	6 cut(s)	146, 147, 513, 868, 1020, 1767
BspMAI	CTGCAG	2 cut(s)	1122, 1183
BspPI	GGATC	4 cut(s)	455, 1013, 1026, 1711
BspQI	GCTCTTC	1 cut(s)	990
BspT104I	TTCGAA	2 cut(s)	988, 1283
BspT107I	GGYRCC	1 cut(s)	1765
BsrI	ACTGG	6 cut(s)	170, 904, 1031, 1208, 1389, 1489
BssECI	CCNNGG	9 cut(s)	99, 148, 465, 466, 875, 937, 1494, 1650, 1710
BssMI	GATC	6 cut(s)	460, 550, 768, 887, 1018, 1703
BssNAI	GTATAC	1 cut(s)	1318
BssNI	GRCGYC	1 cut(s)	105
BssSI	CACGAG	1 cut(s)	213
BssT1I	CCWWGG	3 cut(s)	99, 1494, 1710
Bst1107I	GTATAC	1 cut(s)	1318
Bst2BI	CACGAG	1 cut(s)	213
Bst2UI	CCWGG	4 cut(s)	150, 467, 876, 939
Bst4CI	ACNGT	5 cut(s)	713, 787, 836, 1105, 1135
Bst6I	CTCTTC	6 cut(s)	263, 735, 836, 990, 1416, 1500
BstACI	GRCGYC	1 cut(s)	105
BstBI	TTCGAA	2 cut(s)	988, 1283
BstC8I	GCNNGC	4 cut(s)	205, 250, 609, 1556
BstDEI	CTNAG	5 cut(s)	264, 366, 382, 593, 652
BstDSI	CCRYGG	3 cut(s)	1494, 1650, 1710
BstF5I	GGATG	5 cut(s)	325, 1369, 1516, 1660, 1720
BstFNI	CGCG	2 cut(s)	210, 562
BstHHI	GCGC	2 cut(s)	129, 212
BstKTI	GATC	6 cut(s)	463, 553, 771, 890, 1021, 1706
BstMAI	GTCTC	1 cut(s)	830
BstMBI	GATC	6 cut(s)	460, 550, 768, 887, 1018, 1703
BstMWI	GCNNNNNNNGC	7 cut(s)	21, 104, 126, 200, 209, 980, 1643
BstNI	CCWGG	4 cut(s)	150, 467, 876, 939
BstSCI	CCNGG	4 cut(s)	148, 465, 874, 937
BstSFI	CTRYAG	4 cut(s)	960, 978, 1118, 1179
BstUI	CGCG	2 cut(s)	210, 562
BstV1I	GCAGC	5 cut(s)	232, 639, 1165, 1193, 1589
BstX2I	RGATCY	3 cut(s)	460, 1018, 1703
BstXI	CCANNNNNNTGG	1 cut(s)	1069
BstYI	RGATCY	3 cut(s)	460, 1018, 1703
BstZ17I	GTATAC	1 cut(s)	1318
Bsu15I	ATCGAT	2 cut(s)	222, 549
BsuI	GTATCC	1 cut(s)	164
BsuRI	GGCC	5 cut(s)	98, 169, 194, 801, 1637
BsuTUI	ATCGAT	2 cut(s)	222, 549
BtgI	CCRYGG	3 cut(s)	1494, 1650, 1710
BtsCI	GGATG	5 cut(s)	325, 1369, 1516, 1660, 1720
BtsIMutI	CAGTG	2 cut(s)	792, 1038
Cac8I	GCNNGC	4 cut(s)	205, 250, 609, 1556
CciI	TCATGA	1 cut(s)	763
CfoI	GCGC	2 cut(s)	129, 212
Cfr13I	GGNCC	5 cut(s)	145, 168, 193, 512, 1028
ClaI	ATCGAT	2 cut(s)	222, 549
CseI	GACGC	1 cut(s)	113
Csp6I	GTAC	5 cut(s)	55, 342, 471, 1225, 1766
CviAII	CATG	4 cut(s)	764, 1199, 1495, 1711
CviQI	GTAC	5 cut(s)	55, 342, 471, 1225, 1766
DdeI	CTNAG	5 cut(s)	264, 366, 382, 593, 652
DpnI	GATC	6 cut(s)	462, 552, 770, 889, 1020, 1705
DpnII	GATC	6 cut(s)	460, 550, 768, 887, 1018, 1703
DraI	TTTAAA	1 cut(s)	1681
DraIII	CACNNNGTG	1 cut(s)	479
DrdI	GACNNNNNNGTC	1 cut(s)	1440
DseDI	GACNNNNNNGTC	1 cut(s)	1440
Eam1104I	CTCTTC	6 cut(s)	263, 735, 836, 990, 1416, 1500
EarI	CTCTTC	6 cut(s)	263, 735, 836, 990, 1416, 1500
Ecl136II	GAGCTC	1 cut(s)	187
Eco130I	CCWWGG	3 cut(s)	99, 1494, 1710
Eco24I	GRGCYC	2 cut(s)	189, 265
Eco47I	GGWCC	3 cut(s)	145, 512, 1028
Eco53kI	GAGCTC	1 cut(s)	187
Eco57I	CTGAAG	3 cut(s)	65, 1248, 1602
Eco88I	CYCGRG	1 cut(s)	456
EcoICRI	GAGCTC	1 cut(s)	187
EcoO109I	RGGNCCY	3 cut(s)	145, 193, 512
EcoRII	CCWGG	4 cut(s)	148, 465, 874, 937
EcoT14I	CCWWGG	3 cut(s)	99, 1494, 1710
EcoT38I	GRGCYC	2 cut(s)	189, 265
ErhI	CCWWGG	3 cut(s)	99, 1494, 1710
FaeI	CATG	4 cut(s)	767, 1202, 1498, 1714
FalI	AAGNNNNNCTT	4 cut(s)	104, 136, 1575, 1607
FaqI	GGGAC	1 cut(s)	158
FatI	CATG	4 cut(s)	763, 1198, 1494, 1710
FauI	CCCGC	2 cut(s)	257, 567
FblI	GTMKAC	1 cut(s)	1317
Fnu4HI	GCNGC	6 cut(s)	208, 246, 628, 1179, 1182, 1578
FokI	GGATG	5 cut(s)	332, 1356, 1523, 1667, 1727
FriOI	GRGCYC	2 cut(s)	189, 265
Fsp4HI	GCNGC	6 cut(s)	208, 246, 628, 1179, 1182, 1578
FspBI	CTAG	5 cut(s)	329, 687, 716, 1245, 1551
GlaI	GCGC	2 cut(s)	128, 211
GluI	GCNGC	6 cut(s)	208, 246, 628, 1179, 1182, 1578
GsaI	CCCAGC	3 cut(s)	1061, 1244, 1292
GsuI	CTGGAG	1 cut(s)	858
HaeIII	GGCC	5 cut(s)	98, 169, 194, 801, 1637
HgaI	GACGC	1 cut(s)	113
HhaI	GCGC	2 cut(s)	129, 212
Hin1I	GRCGYC	1 cut(s)	105
Hin1II	CATG	4 cut(s)	767, 1202, 1498, 1714
Hin6I	GCGC	2 cut(s)	127, 210
HinP1I	GCGC	2 cut(s)	127, 210
HincII	GTYRAC	1 cut(s)	882
HindII	GTYRAC	1 cut(s)	882
HindIII	AAGCTT	1 cut(s)	1093
HinfI	GANTC	5 cut(s)	308, 350, 1249, 1328, 1514
HpaI	GTTAAC	1 cut(s)	882
HphI	GGTGA	4 cut(s)	73, 85, 511, 1733
Hpy166II	GTNNAC	3 cut(s)	473, 882, 1318
Hpy188I	TCNGA	5 cut(s)	45, 267, 385, 430, 1267
Hpy188III	TCNNGA	9 cut(s)	139, 329, 449, 458, 756, 764, 772, 1253, 1696
Hpy8I	GTNNAC	3 cut(s)	473, 882, 1318
HpyCH4III	ACNGT	5 cut(s)	713, 787, 836, 1105, 1135
HpyCH4V	TGCA	7 cut(s)	627, 700, 996, 1120, 1181, 1198, 1577
HpyF10VI	GCNNNNNNNGC	7 cut(s)	21, 104, 126, 200, 209, 980, 1643
HpyF3I	CTNAG	5 cut(s)	264, 366, 382, 593, 652
Hsp92I	GRCGYC	1 cut(s)	105
Hsp92II	CATG	4 cut(s)	767, 1202, 1498, 1714
HspAI	GCGC	2 cut(s)	127, 210
KflI	GGGWCCC	1 cut(s)	145
KpnI	GGTACC	1 cut(s)	1769
KspAI	GTTAAC	1 cut(s)	882
Kzo9I	GATC	6 cut(s)	460, 550, 768, 887, 1018, 1703
LguI	GCTCTTC	1 cut(s)	990
LmnI	GCTCC	6 cut(s)	79, 178, 184, 719, 1092, 1175
Lsp1109I	GCAGC	5 cut(s)	232, 639, 1165, 1193, 1589
LweI	GCATC	6 cut(s)	434, 442, 532, 836, 961, 1645
MaeI	CTAG	5 cut(s)	329, 687, 716, 1245, 1551
MaeIII	GTNAC	2 cut(s)	531, 707
MalI	GATC	6 cut(s)	462, 552, 770, 889, 1020, 1705
MboI	GATC	6 cut(s)	460, 550, 768, 887, 1018, 1703
MfeI	CAATTG	1 cut(s)	1023
MflI	RGATCY	3 cut(s)	460, 1018, 1703
MhlI	GDGCHC	3 cut(s)	84, 189, 265
MlyI	GAGTC	2 cut(s)	302, 1258
MmeI	TCCRAC	2 cut(s)	297, 888
MroXI	GAANNNNTTC	1 cut(s)	729
MseI	TTAA	8 cut(s)	411, 540, 735, 831, 881, 1359, 1593, 1680
MspA1I	CMGCKG	2 cut(s)	611, 1580
MspR9I	CCNGG	4 cut(s)	150, 467, 876, 939
MunI	CAATTG	1 cut(s)	1023
MvaI	CCWGG	4 cut(s)	150, 467, 876, 939
MvnI	CGCG	2 cut(s)	210, 562
MwoI	GCNNNNNNNGC	7 cut(s)	21, 104, 126, 200, 209, 980, 1643
NcoI	CCATGG	2 cut(s)	1494, 1710
NdeII	GATC	6 cut(s)	460, 550, 768, 887, 1018, 1703
NlaIII	CATG	4 cut(s)	767, 1202, 1498, 1714
NlaIV	GGNNCC	6 cut(s)	146, 147, 513, 868, 1020, 1767
NmeAIII	GCCGAG	1 cut(s)	96
NmuCI	GTSAC	1 cut(s)	707
NspV	TTCGAA	2 cut(s)	988, 1283
PaeR7I	CTCGAG	1 cut(s)	456
PagI	TCATGA	1 cut(s)	763
PasI	CCCWGGG	1 cut(s)	466
PciSI	GCTCTTC	1 cut(s)	990
PcsI	WCGNNNNNNNCGW	2 cut(s)	211, 228
PdmI	GAANNNNTTC	1 cut(s)	729
PfeI	GAWTC	3 cut(s)	350, 1328, 1514
PflMI	CCANNNNNTGG	1 cut(s)	1495
PkrI	GCNGC	6 cut(s)	209, 247, 629, 1180, 1183, 1579
PleI	GAGTC	2 cut(s)	302, 1257
PpsI	GAGTC	2 cut(s)	302, 1257
PpuMI	RGGWCCY	2 cut(s)	145, 512
Psp124BI	GAGCTC	1 cut(s)	189
Psp5II	RGGWCCY	2 cut(s)	145, 512
Psp6I	CCWGG	4 cut(s)	148, 465, 874, 937
PspFI	CCCAGC	3 cut(s)	1057, 1240, 1288
PspGI	CCWGG	4 cut(s)	148, 465, 874, 937
PspN4I	GGNNCC	6 cut(s)	146, 147, 513, 868, 1020, 1767
PspPI	GGNCC	5 cut(s)	145, 168, 193, 512, 1028
PspPPI	RGGWCCY	2 cut(s)	145, 512
PstI	CTGCAG	2 cut(s)	1122, 1183
PsuI	RGATCY	3 cut(s)	460, 1018, 1703
PvuII	CAGCTG	2 cut(s)	611, 1580
RsaI	GTAC	5 cut(s)	56, 343, 472, 1226, 1767
RsaNI	GTAC	5 cut(s)	55, 342, 471, 1225, 1766
SacI	GAGCTC	1 cut(s)	189
SapI	GCTCTTC	1 cut(s)	990
SaqAI	TTAA	8 cut(s)	411, 540, 735, 831, 881, 1359, 1593, 1680
SatI	GCNGC	6 cut(s)	208, 246, 628, 1179, 1182, 1578
Sau3AI	GATC	6 cut(s)	460, 550, 768, 887, 1018, 1703
Sau96I	GGNCC	5 cut(s)	145, 168, 193, 512, 1028
ScaI	AGTACT	1 cut(s)	343
SchI	GAGTC	2 cut(s)	302, 1258
ScrFI	CCNGG	4 cut(s)	150, 467, 876, 939
SduI	GDGCHC	3 cut(s)	84, 189, 265
SfaNI	GCATC	6 cut(s)	434, 442, 532, 836, 961, 1645
SfcI	CTRYAG	4 cut(s)	960, 978, 1118, 1179
Sfr274I	CTCGAG	1 cut(s)	456
SfuI	TTCGAA	2 cut(s)	988, 1283
SinI	GGWCC	3 cut(s)	145, 512, 1028
SlaI	CTCGAG	1 cut(s)	456
SmlI	CTYRAG	2 cut(s)	188, 456
SmoI	CTYRAG	2 cut(s)	188, 456
SsiI	CCGC	3 cut(s)	208, 250, 560
SspMI	CTAG	5 cut(s)	329, 687, 716, 1245, 1551
SstI	GAGCTC	1 cut(s)	189
StyD4I	CCNGG	4 cut(s)	148, 465, 874, 937
StyI	CCWWGG	3 cut(s)	99, 1494, 1710
TaaI	ACNGT	5 cut(s)	713, 787, 836, 1105, 1135
TaqI	TCGA	9 cut(s)	138, 198, 222, 231, 457, 549, 779, 988, 1283
TatI	WGTACW	2 cut(s)	54, 341
TauI	GCSGC	1 cut(s)	210
TfiI	GAWTC	3 cut(s)	350, 1328, 1514
Tru1I	TTAA	8 cut(s)	411, 540, 735, 831, 881, 1359, 1593, 1680
Tru9I	TTAA	8 cut(s)	411, 540, 735, 831, 881, 1359, 1593, 1680
TscAI	CASTG	2 cut(s)	792, 1038
TseFI	GTSAC	1 cut(s)	707
TseI	GCWGC	5 cut(s)	245, 627, 1178, 1181, 1577
Tsp45I	GTSAC	1 cut(s)	707
TspDTI	ATGAA	6 cut(s)	240, 336, 1323, 1327, 1491, 1806
TspGWI	ACGGA	2 cut(s)	1212, 1667
TspRI	CASTG	2 cut(s)	792, 1038
Van91I	CCANNNNNTGG	1 cut(s)	1495
VpaK11BI	GGWCC	3 cut(s)	145, 512, 1028
XapI	RAATTY	2 cut(s)	1041, 1218
XbaI	TCTAGA	1 cut(s)	328
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1657
XhoI	CTCGAG	1 cut(s)	456
XmiI	GTMKAC	1 cut(s)	1317
XmnI	GAANNNNTTC	1 cut(s)	729
XspI	CTAG	5 cut(s)	329, 687, 716, 1245, 1551
ZrmI	AGTACT	1 cut(s)	343

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.