Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0011392

Physical Location & Seq

Genomic Coordinates Reverse (-)

23284889 .. 23289696

Gene Structure 4808 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00184090.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGGTAAAGAGAAGCAAAAAGAGCAAAAGCAAGAGAGTGCCTCTGAAGAAGAAGTACAAGGTGATAAGGAAGGTGAAGGAGCACCACAAGAAGAAGGCCAAGGACGCCAAGAAGCTCGGCTTCCAGCGCAAGAAGGTCGAGAAGGACCCAGGTATCCCTAACGACTGGCCCTTCAAGGAGCAGGAGCTCAAGGCCCTCGAAGCTCGCCGCGCTCGTGTCATCGATGAAATCGAGCAGAAGAAAGCTGCCCGCAAAGAAAGGGCTCAGAAGAGGAAGCTGGGAGAGTTAGAGGACGACGATGATGACGGGGACTCCAAGTTGGATGAAGTACTAGTGGAAAAGAGTACTGATGATTCCATTGGGTTTGCTAAGAATAGGGATACCTCAGATAGGGCTTTCTACAAGGAGTTGGTTAAAGTTATTGAAGCATCAGATGTCATTTTGGAGGTTCTTGATGCTCGAGATCCCCTGGGTACACGATGTGTTGATATGGAAAAGATGGTGAGGAAGTCGGGTCCTAATAAGCATCTTGTGTTACTTCTTAACAAAATCGATCTTATCCCGCGTGAAGCTGTTGAGAAGTGGCTCACTTATCTTAGGGAGGAGTTGCCAGCTGTTGCCTTCAAATGCAGCACCCAAGAACAAAAATCAAACTTAGGGTGGAAATCGTCCTCTAAAAAATCAAAACCTAGCAACCTTTTGCAGACAAGTGACTGTCTAGGAGCTGAAACTCTTCTTAAATTGTTGAAGAACTATTCAAGAAGTCATGAGATCAAGAAGTCGATTACAGTGGGTATTATTGGCCTACCTAATGTTGGTAAGAGTAGTCTCATTAACAGTTTGAAGAGATGCCGTGTCGTCAATGTTGGTTCCACTCCAGGGTTAACAAGATCACTACAAGAAGTCCAGTTGGATAATAATGTCAAATTGATAGATTGCCCTGGTGTTGTAATGCTCAAATCTACAGAAAATGATGCTTCTATAGCTCTTCGAAATTGCAAAAGAATTGAGAAGTTAGAGGATCCAATTGGTCCAGTGAGGGAAATTTTGAAGCTCTGCCCAGCCAGATTGTTGGTATCTATATACAAGCTCCCAAGCTTTGATACCGTTGATGACTTTCTGCAGAAGGTGGCTACTGTTAGGGGTAAGCTGAAAAAGGGTGGTGTTGTAGATATTGGAGCTGCAGCCAGAATTGTTCTGCATGACTGGAATGAGGGTAAAATTCCGTACTACACTATGCCCCCAGCTAGGAGTCAAGAAGAACCTTCAGAGGCGAAAATTGTTTCGAAGCTGGGCAAGGAGTTGAACATTGACGAAGTATACAATGGAGAATCTTCATTCATTGGAAGCCTCAAATCTGTTAATGATTTCCATCCTGTTGAAGTTCCTCCCAGTTGCCCACTCAATTTTGATGAGGATATGGAAGAGAATAAAAGACCATCAAGTCAAGCTAATGGAAGTCCTAAAGATATGGTTGATGAAGACGATGACCAGTCCATGGCAGTTGAAGAGGATGATTCAGGCAAGGCAAAAGAAAAGACGGCTACCAAAACTAGCAGGCAGAATGAGAAATTGTATGCAGCTGAAGGTATGCTTAATACAAGGAAGAAGAAAGCAGAGAAGAAGATGAGGAAAAAGGCCAAATCAGCTTCCACGGATGCTATGGAAGATGATTATGATTTTAAAGTTGATTACATGAAGAAGGGATCTGCCATGGATGTTGGTGATGGCATTGGAGGAAAAGATGACGATCAAATTATTGGAAAGGTACCTATGTCTGGTATTGGATTTGATGAAGCAGAGGAAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0003924 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005911 GO:0006355 GO:0007275 GO:0008150 GO:0009506 GO:0009653 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009889 GO:0009890 GO:0009892 GO:0009908 GO:0010073 GO:0010074 GO:0010077 GO:0010154 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017111 GO:0019219 GO:0019222 GO:0019827 GO:0022414 GO:0022613 GO:0030054 GO:0030856 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0042254 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045595 GO:0045604 GO:0045682 GO:0045892 GO:0045934 GO:0045995 GO:0048316 GO:0048366 GO:0048367 GO:0048437 GO:0048444 GO:0048507 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048825 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051171 GO:0051172 GO:0051239 GO:0051252 GO:0051253 GO:0055044 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071840 GO:0080090 GO:0090567 GO:0090696 GO:0090697 GO:0090698 GO:0098727 GO:0099402 GO:1902679 GO:1903506 GO:1903507 GO:1905392 GO:2000024 GO:2000026 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

GN3L_Grn1 MMR_HSR1

Protein Analysis

603

Amino Acids

67.59

Weight (kDa)

8.97

Isoelectric Point (pI)

41.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GN3L_Grn1	PF08701	15 - 90	1e-18	GNL3L/Grn1 putative GTPase
MMR_HSR1	PF01926	263 - 326	1.8e-15	50S ribosome-binding GTPase
FeoB_N	PF02421	263 - 330	8.2e-09	Ferrous iron transport protein B

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011392)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07050
fragaria_vesca	FvH4_3g29200 FvH4_3g29200
malus_domestica	MD05G1177400.v1.1 MD10G1165800.v1.1
prunus_persica	Prupe.8G204300_v2.0.a1
pyrus_communis	pycom05g16330 pycom05g16380 pycom10g14300
rosa_chinensis	RchiOBHm_Chr6g0285031
rosa_laevigata	RLG00000012684
rosa_multiflora	Rmu_sc0002478.1_g000012
rosa_roxburghii	Rroxscaffold_7G00183820 Rroxscaffold_7G00184090
rosa_rugosa	Rorug06G0170100
rosa_samantha	Rh6AG281800 Rh6BG282400 Rh6CG284100 Rh6DG277300
rosa_wichuraiana	Rw6G024210

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1443
Acc65I	GGTACC	1 cut(s)	1768
AccB1I	GGYRCC	1 cut(s)	1768
AccB7I	CCANNNNNTGG	1 cut(s)	1498
AccI	GTMKAC	1 cut(s)	1320
AccII	CGCG	2 cut(s)	210, 565
AciI	CCGC	3 cut(s)	208, 250, 563
AclWI	GGATC	4 cut(s)	458, 1016, 1029, 1714
AcsI	RAATTY	2 cut(s)	1044, 1221
AcuI	CTGAAG	3 cut(s)	65, 1251, 1605
AcyI	GRCGYC	1 cut(s)	105
AdeI	CACNNNGTG	1 cut(s)	482
AfaI	GTAC	6 cut(s)	56, 330, 346, 475, 1229, 1770
AfiI	CCNNNNNNNGG	6 cut(s)	390, 815, 879, 1248, 1498, 1778
AhlI	ACTAGT	1 cut(s)	331
AjnI	CCWGG	4 cut(s)	148, 468, 877, 940
Alw21I	GWGCWC	2 cut(s)	84, 189
Alw26I	GTCTC	1 cut(s)	833
AlwI	GGATC	4 cut(s)	458, 1016, 1029, 1714
Ama87I	CYCGRG	1 cut(s)	459
AoxI	GGCC	5 cut(s)	96, 167, 192, 802, 1638
ApeKI	GCWGC	5 cut(s)	245, 630, 1181, 1184, 1580
ApoI	RAATTY	2 cut(s)	1044, 1221
Asp700I	GAANNNNTTC	1 cut(s)	732
Asp718I	GGTACC	1 cut(s)	1768
AspLEI	GCGC	2 cut(s)	129, 212
AspS9I	GGNCC	5 cut(s)	145, 168, 193, 515, 1031
AsuHPI	GGTGA	4 cut(s)	73, 85, 514, 1736
AsuII	TTCGAA	2 cut(s)	991, 1286
AvaI	CYCGRG	1 cut(s)	459
AvaII	GGWCC	3 cut(s)	145, 515, 1031
BaeI	ACNNNNGTAYC	4 cut(s)	136, 169, 1760, 1793
BamHI	GGATCC	1 cut(s)	1021
BanI	GGYRCC	1 cut(s)	1768
BanII	GRGCYC	2 cut(s)	189, 265
BarI	GAAGNNNNNNTAC	2 cut(s)	38, 70
BauI	CACGAG	1 cut(s)	213
BbsI	GAAGAC	1 cut(s)	1488
Bbv12I	GWGCWC	2 cut(s)	84, 189
BbvI	GCAGC	5 cut(s)	232, 642, 1168, 1196, 1592
BccI	CCATC	4 cut(s)	493, 1380, 1447, 1721
BceAI	ACGGC	2 cut(s)	837, 1557
BcgI	CGANNNNNNTGC	2 cut(s)	118, 152
BciT130I	CCWGG	4 cut(s)	150, 470, 879, 942
BciVI	GTATCC	2 cut(s)	164, 373
BcoDI	GTCTC	1 cut(s)	833
BcuI	ACTAGT	1 cut(s)	331
BfaI	CTAG	5 cut(s)	332, 690, 719, 1248, 1554
BfmI	CTRYAG	4 cut(s)	963, 981, 1121, 1182
BfuI	GTATCC	2 cut(s)	164, 373
BisI	GCNGC	6 cut(s)	208, 246, 631, 1182, 1185, 1581
BlsI	GCNGC	6 cut(s)	209, 247, 632, 1183, 1186, 1582
BmcAI	AGTACT	2 cut(s)	330, 346
Bme1390I	CCNGG	4 cut(s)	150, 470, 879, 942
Bme18I	GGWCC	3 cut(s)	145, 515, 1031
BmeT110I	CYCGRG	1 cut(s)	459
BmgT120I	GGNCC	5 cut(s)	145, 168, 193, 515, 1031
BmiI	GGNNCC	5 cut(s)	147, 516, 871, 1023, 1770
BmrFI	CCNGG	4 cut(s)	150, 470, 879, 942
BmrI	ACTGGG	1 cut(s)	1386
BmsI	GCATC	6 cut(s)	437, 445, 535, 839, 964, 1648
BmuI	ACTGGG	1 cut(s)	1386
BpiI	GAAGAC	1 cut(s)	1488
BplI	GAGNNNNNCTC	2 cut(s)	25, 57
BpmI	CTGGAG	1 cut(s)	861
Bpu14I	TTCGAA	2 cut(s)	991, 1286
BpuEI	CTTGAG	1 cut(s)	173
Bsa29I	ATCGAT	2 cut(s)	222, 552
BsaBI	GATNNNNATC	2 cut(s)	1371, 1749
BsaHI	GRCGYC	1 cut(s)	105
BsaJI	CCNNGG	9 cut(s)	99, 148, 468, 469, 878, 940, 1497, 1653, 1713
BsaXI	ACNNNNNCTCC	2 cut(s)	296, 326
Bsc4I	CCNNNNNNNGG	6 cut(s)	390, 815, 879, 1248, 1498, 1778
Bse1I	ACTGG	6 cut(s)	170, 907, 1034, 1211, 1392, 1492
Bse8I	GATNNNNATC	2 cut(s)	1371, 1749
BseBI	CCWGG	4 cut(s)	150, 470, 879, 942
BseCI	ATCGAT	2 cut(s)	222, 552
BseDI	CCNNGG	9 cut(s)	99, 148, 468, 469, 878, 940, 1497, 1653, 1713
BseGI	GGATG	5 cut(s)	328, 1372, 1519, 1663, 1723
BseJI	GATNNNNATC	2 cut(s)	1371, 1749
BseLI	CCNNNNNNNGG	6 cut(s)	390, 815, 879, 1248, 1498, 1778
BseMII	CTCAG	2 cut(s)	278, 399
BseNI	ACTGG	6 cut(s)	170, 907, 1034, 1211, 1392, 1492
BseRI	GAGGAG	1 cut(s)	617
BseXI	GCAGC	5 cut(s)	232, 642, 1168, 1196, 1592
BseYI	CCCAGC	4 cut(s)	277, 1060, 1243, 1291
Bsh1236I	CGCG	2 cut(s)	210, 565
BshFI	GGCC	5 cut(s)	98, 169, 194, 804, 1640
BshNI	GGYRCC	1 cut(s)	1768
BshVI	ATCGAT	2 cut(s)	222, 552
BsiHKAI	GWGCWC	2 cut(s)	84, 189
BsiHKCI	CYCGRG	1 cut(s)	459
BslFI	GGGAC	1 cut(s)	323
BslI	CCNNNNNNNGG	6 cut(s)	390, 815, 879, 1248, 1498, 1778
BsmAI	GTCTC	1 cut(s)	833
BsmFI	GGGAC	1 cut(s)	323
BsnI	GGCC	5 cut(s)	98, 169, 194, 804, 1640
BsoBI	CYCGRG	1 cut(s)	459
Bsp119I	TTCGAA	2 cut(s)	991, 1286
Bsp1286I	GDGCHC	3 cut(s)	84, 189, 265
Bsp143I	GATC	7 cut(s)	463, 553, 771, 890, 1021, 1706, 1750
Bsp19I	CCATGG	2 cut(s)	1497, 1713
BspACI	CCGC	3 cut(s)	208, 250, 563
BspANI	GGCC	5 cut(s)	98, 169, 194, 804, 1640
BspCNI	CTCAG	2 cut(s)	277, 398
BspDI	ATCGAT	2 cut(s)	222, 552
BspFNI	CGCG	2 cut(s)	210, 565
BspHI	TCATGA	1 cut(s)	766
BspLI	GGNNCC	5 cut(s)	147, 516, 871, 1023, 1770
BspMAI	CTGCAG	2 cut(s)	1125, 1186
BspPI	GGATC	4 cut(s)	458, 1016, 1029, 1714
BspQI	GCTCTTC	1 cut(s)	993
BspT104I	TTCGAA	2 cut(s)	991, 1286
BspT107I	GGYRCC	1 cut(s)	1768
BsrI	ACTGG	6 cut(s)	170, 907, 1034, 1211, 1392, 1492
BssECI	CCNNGG	9 cut(s)	99, 148, 468, 469, 878, 940, 1497, 1653, 1713
BssMI	GATC	7 cut(s)	463, 553, 771, 890, 1021, 1706, 1750
BssNAI	GTATAC	1 cut(s)	1321
BssNI	GRCGYC	1 cut(s)	105
BssSI	CACGAG	1 cut(s)	213
BssT1I	CCWWGG	3 cut(s)	99, 1497, 1713
Bst1107I	GTATAC	1 cut(s)	1321
Bst2BI	CACGAG	1 cut(s)	213
Bst2UI	CCWGG	4 cut(s)	150, 470, 879, 942
Bst4CI	ACNGT	5 cut(s)	716, 790, 839, 1108, 1138
Bst6I	CTCTTC	6 cut(s)	263, 738, 839, 993, 1419, 1503
BstACI	GRCGYC	1 cut(s)	105
BstBI	TTCGAA	2 cut(s)	991, 1286
BstC8I	GCNNGC	4 cut(s)	205, 250, 612, 1559
BstDEI	CTNAG	5 cut(s)	264, 369, 385, 596, 655
BstDSI	CCRYGG	3 cut(s)	1497, 1653, 1713
BstENI	CCTNNNNNAGG	1 cut(s)	388
BstF5I	GGATG	5 cut(s)	328, 1372, 1519, 1663, 1723
BstFNI	CGCG	2 cut(s)	210, 565
BstHHI	GCGC	2 cut(s)	129, 212
BstKTI	GATC	7 cut(s)	466, 556, 774, 893, 1024, 1709, 1753
BstMAI	GTCTC	1 cut(s)	833
BstMBI	GATC	7 cut(s)	463, 553, 771, 890, 1021, 1706, 1750
BstMWI	GCNNNNNNNGC	7 cut(s)	21, 104, 126, 200, 209, 983, 1646
BstNI	CCWGG	4 cut(s)	150, 470, 879, 942
BstSCI	CCNGG	4 cut(s)	148, 468, 877, 940
BstSFI	CTRYAG	4 cut(s)	963, 981, 1121, 1182
BstUI	CGCG	2 cut(s)	210, 565
BstV1I	GCAGC	5 cut(s)	232, 642, 1168, 1196, 1592
BstV2I	GAAGAC	1 cut(s)	1488
BstX2I	RGATCY	3 cut(s)	463, 1021, 1706
BstXI	CCANNNNNNTGG	1 cut(s)	1072
BstYI	RGATCY	3 cut(s)	463, 1021, 1706
BstZ17I	GTATAC	1 cut(s)	1321
Bsu15I	ATCGAT	2 cut(s)	222, 552
BsuI	GTATCC	2 cut(s)	164, 373
BsuRI	GGCC	5 cut(s)	98, 169, 194, 804, 1640
BsuTUI	ATCGAT	2 cut(s)	222, 552
BtgI	CCRYGG	3 cut(s)	1497, 1653, 1713
BtsCI	GGATG	5 cut(s)	328, 1372, 1519, 1663, 1723
BtsIMutI	CAGTG	2 cut(s)	795, 1041
Cac8I	GCNNGC	4 cut(s)	205, 250, 612, 1559
CciI	TCATGA	1 cut(s)	766
CfoI	GCGC	2 cut(s)	129, 212
Cfr13I	GGNCC	5 cut(s)	145, 168, 193, 515, 1031
ClaI	ATCGAT	2 cut(s)	222, 552
CseI	GACGC	1 cut(s)	113
Csp6I	GTAC	6 cut(s)	55, 329, 345, 474, 1228, 1769
CviAII	CATG	5 cut(s)	767, 1202, 1498, 1696, 1714
CviQI	GTAC	6 cut(s)	55, 329, 345, 474, 1228, 1769
DdeI	CTNAG	5 cut(s)	264, 369, 385, 596, 655
DpnI	GATC	7 cut(s)	465, 555, 773, 892, 1023, 1708, 1752
DpnII	GATC	7 cut(s)	463, 553, 771, 890, 1021, 1706, 1750
DraI	TTTAAA	1 cut(s)	1684
DraIII	CACNNNGTG	1 cut(s)	482
DrdI	GACNNNNNNGTC	1 cut(s)	1443
DseDI	GACNNNNNNGTC	1 cut(s)	1443
Eam1104I	CTCTTC	6 cut(s)	263, 738, 839, 993, 1419, 1503
EarI	CTCTTC	6 cut(s)	263, 738, 839, 993, 1419, 1503
Ecl136II	GAGCTC	1 cut(s)	187
Eco130I	CCWWGG	3 cut(s)	99, 1497, 1713
Eco24I	GRGCYC	2 cut(s)	189, 265
Eco47I	GGWCC	3 cut(s)	145, 515, 1031
Eco53kI	GAGCTC	1 cut(s)	187
Eco57I	CTGAAG	3 cut(s)	65, 1251, 1605
Eco88I	CYCGRG	1 cut(s)	459
EcoICRI	GAGCTC	1 cut(s)	187
EcoNI	CCTNNNNNAGG	1 cut(s)	388
EcoO109I	RGGNCCY	3 cut(s)	145, 193, 515
EcoRII	CCWGG	4 cut(s)	148, 468, 877, 940
EcoT14I	CCWWGG	3 cut(s)	99, 1497, 1713
EcoT38I	GRGCYC	2 cut(s)	189, 265
ErhI	CCWWGG	3 cut(s)	99, 1497, 1713
FaeI	CATG	5 cut(s)	770, 1205, 1501, 1699, 1717
FalI	AAGNNNNNCTT	4 cut(s)	104, 136, 1578, 1610
FaqI	GGGAC	1 cut(s)	323
FatI	CATG	5 cut(s)	766, 1201, 1497, 1695, 1713
FauI	CCCGC	2 cut(s)	257, 570
FblI	GTMKAC	1 cut(s)	1320
Fnu4HI	GCNGC	6 cut(s)	208, 246, 631, 1182, 1185, 1581
FokI	GGATG	5 cut(s)	335, 1359, 1526, 1670, 1730
FriOI	GRGCYC	2 cut(s)	189, 265
Fsp4HI	GCNGC	6 cut(s)	208, 246, 631, 1182, 1185, 1581
FspBI	CTAG	5 cut(s)	332, 690, 719, 1248, 1554
GlaI	GCGC	2 cut(s)	128, 211
GluI	GCNGC	6 cut(s)	208, 246, 631, 1182, 1185, 1581
GsaI	CCCAGC	4 cut(s)	281, 1064, 1247, 1295
GsuI	CTGGAG	1 cut(s)	861
HaeIII	GGCC	5 cut(s)	98, 169, 194, 804, 1640
HgaI	GACGC	1 cut(s)	113
HhaI	GCGC	2 cut(s)	129, 212
Hin1I	GRCGYC	1 cut(s)	105
Hin1II	CATG	5 cut(s)	770, 1205, 1501, 1699, 1717
Hin6I	GCGC	2 cut(s)	127, 210
HinP1I	GCGC	2 cut(s)	127, 210
HincII	GTYRAC	1 cut(s)	885
HindII	GTYRAC	1 cut(s)	885
HindIII	AAGCTT	1 cut(s)	1096
HinfI	GANTC	5 cut(s)	311, 353, 1252, 1331, 1517
HpaI	GTTAAC	1 cut(s)	885
HphI	GGTGA	4 cut(s)	73, 85, 514, 1736
Hpy166II	GTNNAC	3 cut(s)	476, 885, 1321
Hpy188I	TCNGA	5 cut(s)	45, 267, 388, 433, 1270
Hpy188III	TCNNGA	7 cut(s)	139, 452, 461, 759, 767, 775, 1256
Hpy8I	GTNNAC	3 cut(s)	476, 885, 1321
Hpy99I	CGWCG	1 cut(s)	299
HpyCH4III	ACNGT	5 cut(s)	716, 790, 839, 1108, 1138
HpyCH4V	TGCA	7 cut(s)	630, 703, 999, 1123, 1184, 1201, 1580
HpyF10VI	GCNNNNNNNGC	7 cut(s)	21, 104, 126, 200, 209, 983, 1646
HpyF3I	CTNAG	5 cut(s)	264, 369, 385, 596, 655
Hsp92I	GRCGYC	1 cut(s)	105
Hsp92II	CATG	5 cut(s)	770, 1205, 1501, 1699, 1717
HspAI	GCGC	2 cut(s)	127, 210
KpnI	GGTACC	1 cut(s)	1772
KspAI	GTTAAC	1 cut(s)	885
Kzo9I	GATC	7 cut(s)	463, 553, 771, 890, 1021, 1706, 1750
LguI	GCTCTTC	1 cut(s)	993
LmnI	GCTCC	6 cut(s)	79, 178, 184, 722, 1095, 1178
Lsp1109I	GCAGC	5 cut(s)	232, 642, 1168, 1196, 1592
LweI	GCATC	6 cut(s)	437, 445, 535, 839, 964, 1648
MaeI	CTAG	5 cut(s)	332, 690, 719, 1248, 1554
MaeIII	GTNAC	2 cut(s)	534, 710
MalI	GATC	7 cut(s)	465, 555, 773, 892, 1023, 1708, 1752
MboI	GATC	7 cut(s)	463, 553, 771, 890, 1021, 1706, 1750
MfeI	CAATTG	1 cut(s)	1026
MflI	RGATCY	3 cut(s)	463, 1021, 1706
MhlI	GDGCHC	3 cut(s)	84, 189, 265
MlyI	GAGTC	2 cut(s)	305, 1261
MmeI	TCCRAC	2 cut(s)	300, 891
MroXI	GAANNNNTTC	1 cut(s)	732
MseI	TTAA	8 cut(s)	414, 543, 738, 834, 884, 1362, 1596, 1683
MspA1I	CMGCKG	2 cut(s)	614, 1583
MspR9I	CCNGG	4 cut(s)	150, 470, 879, 942
MunI	CAATTG	1 cut(s)	1026
MvaI	CCWGG	4 cut(s)	150, 470, 879, 942
MvnI	CGCG	2 cut(s)	210, 565
MwoI	GCNNNNNNNGC	7 cut(s)	21, 104, 126, 200, 209, 983, 1646
NcoI	CCATGG	2 cut(s)	1497, 1713
NdeII	GATC	7 cut(s)	463, 553, 771, 890, 1021, 1706, 1750
NlaIII	CATG	5 cut(s)	770, 1205, 1501, 1699, 1717
NlaIV	GGNNCC	5 cut(s)	147, 516, 871, 1023, 1770
NmeAIII	GCCGAG	1 cut(s)	96
NmuCI	GTSAC	1 cut(s)	710
NspV	TTCGAA	2 cut(s)	991, 1286
PaeR7I	CTCGAG	1 cut(s)	459
PagI	TCATGA	1 cut(s)	766
PasI	CCCWGGG	1 cut(s)	469
PciSI	GCTCTTC	1 cut(s)	993
PcsI	WCGNNNNNNNCGW	2 cut(s)	211, 228
PdmI	GAANNNNTTC	1 cut(s)	732
PfeI	GAWTC	3 cut(s)	353, 1331, 1517
PflMI	CCANNNNNTGG	1 cut(s)	1498
PkrI	GCNGC	6 cut(s)	209, 247, 632, 1183, 1186, 1582
PleI	GAGTC	2 cut(s)	305, 1260
PpsI	GAGTC	2 cut(s)	305, 1260
PpuMI	RGGWCCY	2 cut(s)	145, 515
Psp124BI	GAGCTC	1 cut(s)	189
Psp5II	RGGWCCY	2 cut(s)	145, 515
Psp6I	CCWGG	4 cut(s)	148, 468, 877, 940
PspFI	CCCAGC	4 cut(s)	277, 1060, 1243, 1291
PspGI	CCWGG	4 cut(s)	148, 468, 877, 940
PspN4I	GGNNCC	5 cut(s)	147, 516, 871, 1023, 1770
PspPI	GGNCC	5 cut(s)	145, 168, 193, 515, 1031
PspPPI	RGGWCCY	2 cut(s)	145, 515
PstI	CTGCAG	2 cut(s)	1125, 1186
PsuI	RGATCY	3 cut(s)	463, 1021, 1706
PvuII	CAGCTG	2 cut(s)	614, 1583
RsaI	GTAC	6 cut(s)	56, 330, 346, 475, 1229, 1770
RsaNI	GTAC	6 cut(s)	55, 329, 345, 474, 1228, 1769
SacI	GAGCTC	1 cut(s)	189
SapI	GCTCTTC	1 cut(s)	993
SaqAI	TTAA	8 cut(s)	414, 543, 738, 834, 884, 1362, 1596, 1683
SatI	GCNGC	6 cut(s)	208, 246, 631, 1182, 1185, 1581
Sau3AI	GATC	7 cut(s)	463, 553, 771, 890, 1021, 1706, 1750
Sau96I	GGNCC	5 cut(s)	145, 168, 193, 515, 1031
ScaI	AGTACT	2 cut(s)	330, 346
SchI	GAGTC	2 cut(s)	305, 1261
ScrFI	CCNGG	4 cut(s)	150, 470, 879, 942
SduI	GDGCHC	3 cut(s)	84, 189, 265
SfaNI	GCATC	6 cut(s)	437, 445, 535, 839, 964, 1648
SfcI	CTRYAG	4 cut(s)	963, 981, 1121, 1182
Sfr274I	CTCGAG	1 cut(s)	459
SfuI	TTCGAA	2 cut(s)	991, 1286
SinI	GGWCC	3 cut(s)	145, 515, 1031
SlaI	CTCGAG	1 cut(s)	459
SmlI	CTYRAG	2 cut(s)	188, 459
SmoI	CTYRAG	2 cut(s)	188, 459
SpeI	ACTAGT	1 cut(s)	331
SsiI	CCGC	3 cut(s)	208, 250, 563
SspMI	CTAG	5 cut(s)	332, 690, 719, 1248, 1554
SstI	GAGCTC	1 cut(s)	189
StyD4I	CCNGG	4 cut(s)	148, 468, 877, 940
StyI	CCWWGG	3 cut(s)	99, 1497, 1713
TaaI	ACNGT	5 cut(s)	716, 790, 839, 1108, 1138
TaqI	TCGA	9 cut(s)	138, 198, 222, 231, 460, 552, 782, 991, 1286
TatI	WGTACW	3 cut(s)	54, 328, 344
TauI	GCSGC	1 cut(s)	210
TfiI	GAWTC	3 cut(s)	353, 1331, 1517
Tru1I	TTAA	8 cut(s)	414, 543, 738, 834, 884, 1362, 1596, 1683
Tru9I	TTAA	8 cut(s)	414, 543, 738, 834, 884, 1362, 1596, 1683
TscAI	CASTG	2 cut(s)	795, 1041
TseFI	GTSAC	1 cut(s)	710
TseI	GCWGC	5 cut(s)	245, 630, 1181, 1184, 1580
Tsp45I	GTSAC	1 cut(s)	710
TspDTI	ATGAA	7 cut(s)	240, 339, 1326, 1330, 1494, 1712, 1809
TspGWI	ACGGA	2 cut(s)	1215, 1670
TspRI	CASTG	2 cut(s)	795, 1041
Van91I	CCANNNNNTGG	1 cut(s)	1498
VpaK11BI	GGWCC	3 cut(s)	145, 515, 1031
XagI	CCTNNNNNAGG	1 cut(s)	388
XapI	RAATTY	2 cut(s)	1044, 1221
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1660
XhoI	CTCGAG	1 cut(s)	459
XmiI	GTMKAC	1 cut(s)	1320
XmnI	GAANNNNTTC	1 cut(s)	732
XspI	CTAG	5 cut(s)	332, 690, 719, 1248, 1554
ZrmI	AGTACT	2 cut(s)	330, 346

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.