Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0015953

Physical Location & Seq

Genomic Coordinates Reverse (-)

1210495 .. 1215203

Gene Structure 4709 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000015756

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2220 bp

ATGTCAGGGTGGGATGAAGGAGCGGTGTACTACAGCGACCAAGCGCAGTCGCTGGGCGGCGACACCGACGACCCCGGAAGCAACTCCGCCGCCGCCGCCAGCCGCCACTCGGTCCTCCAGAAATTCAAGGAGTTCATCCGAAACTTCGAGACTCAATCAAGCTCGAATGTATTCCCTTACAGAGAGAGCCTCCTCCACAATCCTAAGCACCTCGTCGTCGACATGGAGGACCTCGGCGACTTCGACTCCGATCTCCCCGCCAAGCTCCGCTCCGCCCCCGCCGATTACTTGCCACTGTTTGAGAACGCCGCCGGACAGGTTTTGGCGAATTTGAAGACGAAGGTGGCCGGAAGCGAAGGCCAATTGGAGGAACCGGTGCCGGAGGATGTTCAGATTTTGCTGACCTCCAGAGAAGATACAACTTCCATGCGCAAGCTTGGGGCTCAAAGTATTTCGAAACTCATCAAGATATCTGGGATCACGATAGCTGCATCAAGAGTCAAGGCAAAAGCGACTTATGTGATTGTGATGTGTAAGAACTGTAAAAATGTGCAAAGGGTTCCTTGTCGACCAGGCCTTGGTGGGGCAATTGTACCTCGCACGTGTAACCATATTCCTCAGCCTGGAGAAGAACCTTGTCCACTTGATCCATGGGTTGTGGTTCCTGATAAGAGCAAGTATGTTGATCAGCAGACCTTAAAATTGCAAGAGAATCCGGAGGATGTGCCTACTGGAGAGCTTCCAAGAAATATGCTTCTATCTGTGGACCGCCATCTTGTTCAGACAATTGTGCCTGGCATAAGATTAACAATCATGGGAATTTATAGTATCTATCAAGCTTCCAATTCTTCCACCAACCACAAAGGAGCAGTTGCTGTTAGACAGCCTTACATCAGAGTAGTAGGAATCGAAGAAGCAAATGATGCCAACTCAAGAGGTCCCGCTGCTTTCACAGCTGAAGAGATAGAAGAATTTAAGAAATTTGCTGCAGAACCTGATGTATATAAAAGCATATGCTCAAAGATTGCCCCCTCTATCTTTGGTCACGAAGATGTAAAGAAGGCCGTGGCTTGTCTTCTTTTTGGGGGATCTAGAAAGCATTTGCCTGATGGTGTGAAGCTAAGAGGTGATATCAATGTCTTACTTTTGGGGGATCCATCTACAGCTAAATCACAGTTTCTCAAGTTTGTTGAGAAAACAGCTCCTGTAGCTGTTTATACTTCGGGGAAAGGCTCATCTGCAGCTGGTCTTACAGCTTCTGTGATCAGAGATAACAGCTCTCGAGAGTTTTATCTTGAAGGAGGAGCCATGGTTTTGGCAGATGGAGGTGTTGTATGTATTGATGAGTTTGACAAAATGAGACCGGAGGATAGGGTTGCCATTCATGAAGCCATGGAGCAGCAAACCATTTCCATTGCCAAAGCAGGAATAACAACAGTTCTTAATTCTAGAACCTCTGTTCTTGCAGCTGCTAACCCTCCATCTGGACGTTATGATGATCTTAAGACTGCTCAGGATAACATAGATCTGCAGACAACAATTCTTTCTAGATTTGATTTGATCTTCATTGTTAAAGACATCAGGATGTATAGTCAGGACAAGATAATAGCAAGTCATGTAATAAAGGTTCATGCATCTGCTGGGGCAGCAGTGGGTGATAAGAGGGAGGTTTCTAAGGAGAAAGAAGAGAATTGGCTGAAGAGGTACCTTCAATACTGTCGAACTGAGTGTCATCCCCGTTTGTCAGAGTCTGCATCCAAATCACTGCAGAACCATTATGTCAAAATCAGACAGGACATGAGACAGCAGGCAAATGAAACTGGAGAGGCTGCTGCAATACCAATCACTGTAAGGCAGCTTGAAGCTATAGTGAGGTTGAGTGAGTCGCTTGCTAAAATGAAACTGTCCCATGTTGCTACCGAGGAGAATGTGACTGAAGCAGTAAGACTTTTTACTGTATCCACAATGGACGCAGCAAGATCTGGAATTTATCAACAAGTCAATATTAGTCCCGAGATGGCAAATGAAATTAAGCAAGCTGAATCTCATATTAAGAGAAGAGTAGGCATTGGGAACCACATTTCGGAGAGAAAGTTGGTTGATGAGCTCACAAGAATGGGGATGAATGAATCCATTGTAAGAAGAGCTCTTATAATTATGCACCAGAGAGATGAAGTCGAATACAAGGGAGAAAGACGCCTGATTCTACGGAAATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000347 GO:0000785 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006268 GO:0006275 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0030174 GO:0031323 GO:0031326 GO:0032392 GO:0032508 GO:0032991 GO:0034641 GO:0034645 GO:0042555 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0050789 GO:0050794 GO:0051052 GO:0051171 GO:0051276 GO:0060255 GO:0065007 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090329 GO:1901360 GO:1901576 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko03030 ko04110 ko04111 ko04113 ko05206 map03030 map04110 map04111 map04113 map05206

Pfam Domains

Protein Families

MCM MCM_N MCM_OB Mg_chelatase

Protein Analysis

740

Amino Acids

81.48

Weight (kDa)

7.26

Isoelectric Point (pI)

47.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MCM_N	PF14551	40 - 121	1.6e-11	MCM N-terminal domain
MCM_OB	PF17207	143 - 278	5.2e-34	MCM OB domain
MCM	PF00493	322 - 544	4e-102	MCM P-loop domain
MCM_lid	PF17855	565 - 654	4.7e-28	MCM AAA-lid domain
MCM5_C	PF21933	679 - 737	7.2e-17	MCM5, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015953)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G07690 AT2G07690
fragaria_vesca	FvH4_1g01490
malus_domestica	MD02G1011900.v1.1 MD15G1157500.v1.1
prunus_persica	Prupe.7G252700_v2.0.a1
pyrus_communis	pycom15g14130
rosa_chinensis	RchiOBHm_Chr2g0086411
rosa_laevigata	RLG00000015756
rosa_multiflora	Rmu_sc0005127.1_g000006
rosa_roxburghii	Rroxscaffold_2G00154600
rosa_rugosa	Rorug01G0467200
rosa_samantha	Rh2AG017800 Rh2DG019100
rosa_wichuraiana	Rw2G001480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2153
Acc16I	TGCGCA	1 cut(s)	431
Acc65I	GGTACC	1 cut(s)	1704
AccB1I	GGYRCC	2 cut(s)	376, 1704
AccB7I	CCANNNNNTGG	1 cut(s)	578
AccBSI	CCGCTC	2 cut(s)	23, 270
AccI	GTMKAC	2 cut(s)	219, 568
AccIII	TCCGGA	1 cut(s)	715
AclWI	GGATC	5 cut(s)	485, 641, 1096, 1148, 1161
AcoI	YGGCCR	1 cut(s)	345
AcsI	RAATTY	6 cut(s)	122, 328, 819, 971, 980, 1986
AcuI	CTGAAG	3 cut(s)	978, 1718, 1956
AcvI	CACGTG	1 cut(s)	603
AcyI	GRCGYC	1 cut(s)	2197
AfaI	GTAC	3 cut(s)	29, 594, 1706
AfiI	CCNNNNNNNGG	7 cut(s)	109, 367, 578, 583, 623, 1484, 2083
AflII	CTTAAG	1 cut(s)	1502
AflIII	ACRYGT	1 cut(s)	602
AgeI	ACCGGT	1 cut(s)	373
AgsI	TTSAA	5 cut(s)	127, 334, 1298, 1712, 1862
AjnI	CCWGG	3 cut(s)	571, 622, 793
Alw21I	GWGCWC	2 cut(s)	2109, 2149
Alw26I	GTCTC	3 cut(s)	143, 1354, 1795
AlwI	GGATC	5 cut(s)	485, 641, 1096, 1148, 1161
AlwNI	CAGNNNCTG	6 cut(s)	52, 875, 995, 1205, 1259, 1751
Ama87I	CYCGRG	2 cut(s)	1281, 2012
Aor13HI	TCCGGA	1 cut(s)	715
AoxI	GGCC	4 cut(s)	345, 358, 574, 1062
ApoI	RAATTY	6 cut(s)	122, 328, 819, 971, 980, 1986
ArsI	GACNNNNNNTTYG	2 cut(s)	1714, 1746
AsiGI	ACCGGT	1 cut(s)	373
Asp700I	GAANNNNTTC	1 cut(s)	170
Asp718I	GGTACC	1 cut(s)	1704
AspLEI	GCGC	2 cut(s)	46, 432
AspS9I	GGNCC	4 cut(s)	112, 229, 766, 938
AsuC2I	CCSGG	1 cut(s)	75
AsuHPI	GGTGA	2 cut(s)	1139, 1667
AsuII	TTCGAA	1 cut(s)	455
AvaI	CYCGRG	2 cut(s)	1281, 2012
AvaII	GGWCC	4 cut(s)	112, 229, 766, 938
BamHI	GGATCC	1 cut(s)	1153
BanI	GGYRCC	2 cut(s)	376, 1704
BanII	GRGCYC	3 cut(s)	445, 2109, 2149
BbrPI	CACGTG	1 cut(s)	603
BbsI	GAAGAC	2 cut(s)	341, 1067
Bbv12I	GWGCWC	2 cut(s)	2109, 2149
BbvCI	CCTCAGC	1 cut(s)	618
BccI	CCATC	6 cut(s)	780, 1103, 1165, 1316, 1489, 2011
BceAI	ACGGC	1 cut(s)	1049
BciT130I	CCWGG	3 cut(s)	573, 624, 795
BciVI	GTATCC	1 cut(s)	1969
BclI	TGATCA	2 cut(s)	685, 1263
BcnI	CCSGG	1 cut(s)	75
BcoDI	GTCTC	3 cut(s)	143, 1354, 1795
BfaI	CTAG	3 cut(s)	1092, 1449, 1548
BfmI	CTRYAG	8 cut(s)	31, 987, 1161, 1206, 1239, 1529, 1766, 1866
BfrI	CTTAAG	1 cut(s)	1502
BfuI	GTATCC	1 cut(s)	1969
BglII	AGATCT	2 cut(s)	1525, 1979
Bme1390I	CCNGG	4 cut(s)	75, 573, 624, 795
Bme18I	GGWCC	4 cut(s)	112, 229, 766, 938
BmeT110I	CYCGRG	2 cut(s)	1281, 2012
BmgT120I	GGNCC	4 cut(s)	112, 229, 766, 938
BmiI	GGNNCC	9 cut(s)	372, 378, 561, 663, 940, 1155, 1306, 1706, 2075
BmrFI	CCNGG	4 cut(s)	75, 573, 624, 795
BmsI	GCATC	4 cut(s)	500, 913, 1643, 1763
BpiI	GAAGAC	2 cut(s)	341, 1067
BplI	GAGNNNNNCTC	2 cut(s)	174, 206
BpmI	CTGGAG	5 cut(s)	101, 391, 645, 753, 1842
Bpu10I	CCTNAGC	3 cut(s)	204, 618, 1512
Bpu14I	TTCGAA	1 cut(s)	455
BpuEI	CTTGAG	2 cut(s)	916, 1166
BpuMI	CCSGG	1 cut(s)	75
BsaAI	YACGTR	1 cut(s)	603
BsaHI	GRCGYC	1 cut(s)	2197
BsaI	GGTCTC	1 cut(s)	1354
BsaJI	CCNNGG	8 cut(s)	73, 232, 577, 650, 1065, 1308, 1392, 1920
BsaWI	WCCGGW	3 cut(s)	373, 715, 1363
BsaXI	ACNNNNNCTCC	8 cut(s)	230, 260, 1296, 1317, 1326, 1347, 2078, 2108
Bsc4I	CCNNNNNNNGG	7 cut(s)	109, 367, 578, 583, 623, 1484, 2083
Bse118I	RCCGGY	1 cut(s)	373
Bse1I	ACTGG	2 cut(s)	736, 1825
Bse3DI	GCAATG	1 cut(s)	1413
BseAI	TCCGGA	1 cut(s)	715
BseBI	CCWGG	3 cut(s)	573, 624, 795
BseDI	CCNNGG	8 cut(s)	73, 232, 577, 650, 1065, 1308, 1392, 1920
BseGI	GGATG	8 cut(s)	19, 135, 391, 727, 1590, 1732, 1754, 2127
BseLI	CCNNNNNNNGG	7 cut(s)	109, 367, 578, 583, 623, 1484, 2083
BseMI	GCAATG	1 cut(s)	1413
BseMII	CTCAG	3 cut(s)	632, 1526, 1716
BseNI	ACTGG	2 cut(s)	736, 1825
BseRI	GAGGAG	3 cut(s)	182, 1317, 1937
BseYI	CCCAGC	2 cut(s)	52, 1640
BshFI	GGCC	4 cut(s)	347, 360, 576, 1064
BshNI	GGYRCC	2 cut(s)	376, 1704
BshTI	ACCGGT	1 cut(s)	373
BsiHKAI	GWGCWC	2 cut(s)	2109, 2149
BsiHKCI	CYCGRG	2 cut(s)	1281, 2012
BsiSI	CCGG	7 cut(s)	75, 312, 348, 374, 380, 716, 1364
BslFI	GGGAC	3 cut(s)	924, 1891, 1995
BslI	CCNNNNNNNGG	7 cut(s)	109, 367, 578, 583, 623, 1484, 2083
BsmAI	GTCTC	3 cut(s)	143, 1354, 1795
BsmFI	GGGAC	3 cut(s)	924, 1891, 1995
BsnI	GGCC	4 cut(s)	347, 360, 576, 1064
Bso31I	GGTCTC	1 cut(s)	1354
BsoBI	CYCGRG	2 cut(s)	1281, 2012
Bsp119I	TTCGAA	1 cut(s)	455
Bsp1286I	GDGCHC	3 cut(s)	445, 2109, 2149
Bsp13I	TCCGGA	1 cut(s)	715
Bsp19I	CCATGG	3 cut(s)	650, 1308, 1392
BspANI	GGCC	4 cut(s)	347, 360, 576, 1064
BspCNI	CTCAG	3 cut(s)	631, 1525, 1717
BspEI	TCCGGA	1 cut(s)	715
BspHI	TCATGA	1 cut(s)	1384
BspLI	GGNNCC	9 cut(s)	372, 378, 561, 663, 940, 1155, 1306, 1706, 2075
BspMAI	CTGCAG	4 cut(s)	991, 1243, 1533, 1770
BspPI	GGATC	5 cut(s)	485, 641, 1096, 1148, 1161
BspQI	GCTCTTC	1 cut(s)	2137
BspT104I	TTCGAA	1 cut(s)	455
BspT107I	GGYRCC	2 cut(s)	376, 1704
BspTI	CTTAAG	1 cut(s)	1502
BspTNI	GGTCTC	1 cut(s)	1354
BsrBI	CCGCTC	2 cut(s)	23, 270
BsrDI	GCAATG	1 cut(s)	1413
BsrFI	RCCGGY	1 cut(s)	373
BsrI	ACTGG	2 cut(s)	736, 1825
BssAI	RCCGGY	1 cut(s)	373
BssECI	CCNNGG	8 cut(s)	73, 232, 577, 650, 1065, 1308, 1392, 1920
BssNI	GRCGYC	1 cut(s)	2197
BssT1I	CCWWGG	4 cut(s)	577, 650, 1308, 1392
Bst2UI	CCWGG	3 cut(s)	573, 624, 795
Bst4CI	ACNGT	8 cut(s)	297, 542, 1176, 1438, 1718, 1849, 1905, 1957
Bst6I	CTCTTC	5 cut(s)	954, 1680, 1694, 2053, 2137
BstACI	GRCGYC	1 cut(s)	2197
BstAFI	CTTAAG	1 cut(s)	1502
BstAPI	GCANNNNNTGC	1 cut(s)	923
BstBAI	YACGTR	1 cut(s)	603
BstBI	TTCGAA	1 cut(s)	455
BstC8I	GCNNGC	5 cut(s)	100, 434, 1809, 1890, 2037
BstDEI	CTNAG	6 cut(s)	204, 618, 1121, 1512, 1674, 1725
BstDSI	CCRYGG	4 cut(s)	650, 1065, 1308, 1392
BstF5I	GGATG	8 cut(s)	19, 135, 391, 727, 1590, 1732, 1754, 2127
BstHHI	GCGC	2 cut(s)	46, 432
BstMAI	GTCTC	3 cut(s)	143, 1354, 1795
BstMWI	GCNNNNNNNGC	5 cut(s)	95, 923, 953, 1208, 1646
BstNI	CCWGG	3 cut(s)	573, 624, 795
BstSCI	CCNGG	4 cut(s)	73, 571, 622, 793
BstSFI	CTRYAG	8 cut(s)	31, 987, 1161, 1206, 1239, 1529, 1766, 1866
BstV2I	GAAGAC	2 cut(s)	341, 1067
BstX2I	RGATCY	4 cut(s)	1088, 1153, 1525, 1979
BstXI	CCANNNNNNTGG	1 cut(s)	1315
BstYI	RGATCY	4 cut(s)	1088, 1153, 1525, 1979
BsuI	GTATCC	1 cut(s)	1969
BsuRI	GGCC	4 cut(s)	347, 360, 576, 1064
BtgI	CCRYGG	4 cut(s)	650, 1065, 1308, 1392
BtsCI	GGATG	8 cut(s)	19, 135, 391, 727, 1590, 1732, 1754, 2127
BtsI	GCAGTG	2 cut(s)	1656, 1763
BtsIMutI	CAGTG	4 cut(s)	293, 1656, 1763, 1845
Cac8I	GCNNGC	5 cut(s)	100, 434, 1809, 1890, 2037
CaiI	CAGNNNCTG	6 cut(s)	52, 875, 995, 1205, 1259, 1751
CciI	TCATGA	1 cut(s)	1384
CfoI	GCGC	2 cut(s)	46, 432
Cfr10I	RCCGGY	1 cut(s)	373
Cfr13I	GGNCC	4 cut(s)	112, 229, 766, 938
CseI	GACGC	2 cut(s)	1979, 2205
Csp6I	GTAC	3 cut(s)	28, 593, 1705
CspAI	ACCGGT	1 cut(s)	373
CviQI	GTAC	3 cut(s)	28, 593, 1705
DdeI	CTNAG	6 cut(s)	204, 618, 1121, 1512, 1674, 1725
EaeI	YGGCCR	1 cut(s)	345
Eam1104I	CTCTTC	5 cut(s)	954, 1680, 1694, 2053, 2137
EarI	CTCTTC	5 cut(s)	954, 1680, 1694, 2053, 2137
EciI	GGCGGA	2 cut(s)	76, 262
Ecl136II	GAGCTC	2 cut(s)	2107, 2147
Eco130I	CCWWGG	4 cut(s)	577, 650, 1308, 1392
Eco147I	AGGCCT	1 cut(s)	576
Eco24I	GRGCYC	3 cut(s)	445, 2109, 2149
Eco31I	GGTCTC	1 cut(s)	1354
Eco32I	GATATC	2 cut(s)	471, 1132
Eco47I	GGWCC	4 cut(s)	112, 229, 766, 938
Eco53kI	GAGCTC	2 cut(s)	2107, 2147
Eco57I	CTGAAG	3 cut(s)	978, 1718, 1956
Eco72I	CACGTG	1 cut(s)	603
Eco88I	CYCGRG	2 cut(s)	1281, 2012
EcoICRI	GAGCTC	2 cut(s)	2107, 2147
EcoO109I	RGGNCCY	2 cut(s)	229, 938
EcoRII	CCWGG	3 cut(s)	571, 622, 793
EcoRV	GATATC	2 cut(s)	471, 1132
EcoT14I	CCWWGG	4 cut(s)	577, 650, 1308, 1392
EcoT22I	ATGCAT	1 cut(s)	1636
EcoT38I	GRGCYC	3 cut(s)	445, 2109, 2149
ErhI	CCWWGG	4 cut(s)	577, 650, 1308, 1392
FalI	AAGNNNNNCTT	2 cut(s)	547, 579
FaqI	GGGAC	3 cut(s)	924, 1891, 1995
FauI	CCCGC	3 cut(s)	265, 286, 949
FauNDI	CATATG	1 cut(s)	1013
FbaI	TGATCA	2 cut(s)	685, 1263
FblI	GTMKAC	2 cut(s)	219, 568
FokI	GGATG	8 cut(s)	26, 122, 398, 734, 1597, 1719, 1741, 2134
FriOI	GRGCYC	3 cut(s)	445, 2109, 2149
FspBI	CTAG	3 cut(s)	1092, 1449, 1548
FspI	TGCGCA	1 cut(s)	431
GlaI	GCGC	2 cut(s)	45, 431
GsaI	CCCAGC	2 cut(s)	56, 1644
GsuI	CTGGAG	5 cut(s)	101, 391, 645, 753, 1842
HaeIII	GGCC	4 cut(s)	347, 360, 576, 1064
HapII	CCGG	7 cut(s)	75, 312, 348, 374, 380, 716, 1364
HgaI	GACGC	2 cut(s)	1979, 2205
HhaI	GCGC	2 cut(s)	46, 432
Hin1I	GRCGYC	1 cut(s)	2197
Hin6I	GCGC	2 cut(s)	44, 430
HinP1I	GCGC	2 cut(s)	44, 430
HincII	GTYRAC	2 cut(s)	220, 569
HindII	GTYRAC	2 cut(s)	220, 569
HindIII	AAGCTT	2 cut(s)	434, 837
HpaII	CCGG	7 cut(s)	75, 312, 348, 374, 380, 716, 1364
HphI	GGTGA	2 cut(s)	1139, 1667
Hpy166II	GTNNAC	5 cut(s)	28, 220, 569, 641, 766
Hpy188I	TCNGA	9 cut(s)	140, 250, 393, 783, 896, 1268, 1747, 1790, 2086
Hpy8I	GTNNAC	5 cut(s)	28, 220, 569, 641, 766
Hpy99I	CGWCG	3 cut(s)	71, 218, 221
HpyAV	CCTTC	6 cut(s)	11, 334, 350, 1054, 1292, 1718
HpyCH4III	ACNGT	8 cut(s)	297, 542, 1176, 1438, 1718, 1849, 1905, 1957
HpyCH4IV	ACGT	2 cut(s)	602, 1489
HpyF10VI	GCNNNNNNNGC	5 cut(s)	95, 923, 953, 1208, 1646
HpyF3I	CTNAG	6 cut(s)	204, 618, 1121, 1512, 1674, 1725
HpySE526I	ACGT	2 cut(s)	602, 1489
Hsp92I	GRCGYC	1 cut(s)	2197
HspAI	GCGC	2 cut(s)	44, 430
Kpn2I	TCCGGA	1 cut(s)	715
KpnI	GGTACC	1 cut(s)	1708
Ksp22I	TGATCA	2 cut(s)	685, 1263
LguI	GCTCTTC	1 cut(s)	2137
LmnI	GCTCC	7 cut(s)	20, 270, 275, 866, 1207, 1304, 1396
LweI	GCATC	4 cut(s)	500, 913, 1643, 1763
MaeI	CTAG	3 cut(s)	1092, 1449, 1548
MaeII	ACGT	2 cut(s)	602, 1489
MaeIII	GTNAC	3 cut(s)	605, 1043, 1930
MbiI	CCGCTC	2 cut(s)	23, 270
MfeI	CAATTG	3 cut(s)	362, 588, 786
MflI	RGATCY	4 cut(s)	1088, 1153, 1525, 1979
MhlI	GDGCHC	3 cut(s)	445, 2109, 2149
MlyI	GAGTC	5 cut(s)	145, 239, 507, 1757, 1892
Mph1103I	ATGCAT	1 cut(s)	1636
MroI	TCCGGA	1 cut(s)	715
MroXI	GAANNNNTTC	1 cut(s)	170
MseI	TTAA	8 cut(s)	698, 806, 975, 1443, 1503, 1572, 2031, 2052
MslI	CAYNNNNRTG	3 cut(s)	1050, 1583, 2114
MspA1I	CMGCKG	4 cut(s)	944, 956, 1244, 1469
MspCI	CTTAAG	1 cut(s)	1502
MspI	CCGG	7 cut(s)	75, 312, 348, 374, 380, 716, 1364
MspR9I	CCNGG	4 cut(s)	75, 573, 624, 795
MunI	CAATTG	3 cut(s)	362, 588, 786
MvaI	CCWGG	3 cut(s)	573, 624, 795
MwoI	GCNNNNNNNGC	5 cut(s)	95, 923, 953, 1208, 1646
NciI	CCSGG	1 cut(s)	75
NcoI	CCATGG	3 cut(s)	650, 1308, 1392
NdeI	CATATG	1 cut(s)	1013
NlaIV	GGNNCC	9 cut(s)	372, 378, 561, 663, 940, 1155, 1306, 1706, 2075
NmeAIII	GCCGAG	1 cut(s)	213
NmuCI	GTSAC	2 cut(s)	1043, 1930
NsbI	TGCGCA	1 cut(s)	431
NsiI	ATGCAT	1 cut(s)	1636
NspV	TTCGAA	1 cut(s)	455
PaeR7I	CTCGAG	1 cut(s)	1281
PagI	TCATGA	1 cut(s)	1384
PceI	AGGCCT	1 cut(s)	576
PciSI	GCTCTTC	1 cut(s)	2137
PcsI	WCGNNNNNNNCGW	1 cut(s)	240
PdmI	GAANNNNTTC	1 cut(s)	170
PfeI	GAWTC	5 cut(s)	712, 906, 2042, 2129, 2203
PflMI	CCANNNNNTGG	1 cut(s)	578
PinAI	ACCGGT	1 cut(s)	373
PleI	GAGTC	5 cut(s)	145, 239, 506, 1756, 1891
PmaCI	CACGTG	1 cut(s)	603
PmlI	CACGTG	1 cut(s)	603
PpsI	GAGTC	5 cut(s)	145, 239, 506, 1756, 1891
Ppu21I	YACGTR	1 cut(s)	603
PpuMI	RGGWCCY	2 cut(s)	229, 938
PsiI	TTATAA	1 cut(s)	2153
Psp124BI	GAGCTC	2 cut(s)	2109, 2149
Psp5II	RGGWCCY	2 cut(s)	229, 938
Psp6I	CCWGG	3 cut(s)	571, 622, 793
PspCI	CACGTG	1 cut(s)	603
PspFI	CCCAGC	2 cut(s)	52, 1640
PspGI	CCWGG	3 cut(s)	571, 622, 793
PspN4I	GGNNCC	9 cut(s)	372, 378, 561, 663, 940, 1155, 1306, 1706, 2075
PspPI	GGNCC	4 cut(s)	112, 229, 766, 938
PspPPI	RGGWCCY	2 cut(s)	229, 938
PsrI	GAACNNNNNNTAC	2 cut(s)	1611, 1643
PstI	CTGCAG	4 cut(s)	991, 1243, 1533, 1770
PstNI	CAGNNNCTG	6 cut(s)	52, 875, 995, 1205, 1259, 1751
PsuI	RGATCY	4 cut(s)	1088, 1153, 1525, 1979
PvuII	CAGCTG	3 cut(s)	956, 1244, 1469
RsaI	GTAC	3 cut(s)	29, 594, 1706
RsaNI	GTAC	3 cut(s)	28, 593, 1705
RseI	CAYNNNNRTG	3 cut(s)	1050, 1583, 2114
SacI	GAGCTC	2 cut(s)	2109, 2149
SalI	GTCGAC	2 cut(s)	218, 567
SapI	GCTCTTC	1 cut(s)	2137
SaqAI	TTAA	8 cut(s)	698, 806, 975, 1443, 1503, 1572, 2031, 2052
Sau96I	GGNCC	4 cut(s)	112, 229, 766, 938
SchI	GAGTC	5 cut(s)	145, 239, 507, 1757, 1892
ScrFI	CCNGG	4 cut(s)	75, 573, 624, 795
SduI	GDGCHC	3 cut(s)	445, 2109, 2149
SfaNI	GCATC	4 cut(s)	500, 913, 1643, 1763
SfcI	CTRYAG	8 cut(s)	31, 987, 1161, 1206, 1239, 1529, 1766, 1866
Sfr274I	CTCGAG	1 cut(s)	1281
SfuI	TTCGAA	1 cut(s)	455
SinI	GGWCC	4 cut(s)	112, 229, 766, 938
SlaI	CTCGAG	1 cut(s)	1281
SmiMI	CAYNNNNRTG	3 cut(s)	1050, 1583, 2114
SmlI	CTYRAG	4 cut(s)	931, 1181, 1281, 1502
SmoI	CTYRAG	4 cut(s)	931, 1181, 1281, 1502
SseBI	AGGCCT	1 cut(s)	576
SspI	AATATT	1 cut(s)	2005
SspMI	CTAG	3 cut(s)	1092, 1449, 1548
SstI	GAGCTC	2 cut(s)	2109, 2149
StuI	AGGCCT	1 cut(s)	576
StyD4I	CCNGG	4 cut(s)	73, 571, 622, 793
StyI	CCWWGG	4 cut(s)	577, 650, 1308, 1392
TaaI	ACNGT	8 cut(s)	297, 542, 1176, 1438, 1718, 1849, 1905, 1957
TaiI	ACGT	2 cut(s)	605, 1492
TaqII	GACCGA	1 cut(s)	100
TatI	WGTACW	1 cut(s)	27
TauI	GCSGC	6 cut(s)	60, 92, 95, 98, 105, 311
TfiI	GAWTC	5 cut(s)	712, 906, 2042, 2129, 2203
Tru1I	TTAA	8 cut(s)	698, 806, 975, 1443, 1503, 1572, 2031, 2052
Tru9I	TTAA	8 cut(s)	698, 806, 975, 1443, 1503, 1572, 2031, 2052
TscAI	CASTG	4 cut(s)	300, 1656, 1770, 1852
TseFI	GTSAC	2 cut(s)	1043, 1930
Tsp45I	GTSAC	2 cut(s)	1043, 1930
TspRI	CASTG	4 cut(s)	300, 1656, 1770, 1852
Van91I	CCANNNNNTGG	1 cut(s)	578
Vha464I	CTTAAG	1 cut(s)	1502
VpaK11BI	GGWCC	4 cut(s)	112, 229, 766, 938
XapI	RAATTY	6 cut(s)	122, 328, 819, 971, 980, 1986
XbaI	TCTAGA	3 cut(s)	1091, 1448, 1547
XcmI	CCANNNNNNNNNTGG	1 cut(s)	648
XhoI	CTCGAG	1 cut(s)	1281
XmiI	GTMKAC	2 cut(s)	219, 568
XmnI	GAANNNNTTC	1 cut(s)	170
XspI	CTAG	3 cut(s)	1092, 1449, 1548
Zsp2I	ATGCAT	1 cut(s)	1636

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.