RLG00000016910

lactoylglutathione

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0014637
Physical Location & Seq
Forward (+)
11156669 .. 11157408
740 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016910

Sequence Viewer

Length: 564 bp
ATGACGCAGATTGAGATCGAGGAAGTTAACAGCTGTGAGTCACTGCCTTTGCTGTCACTCAATCATGTGTCTTTGTTATGCAGATCAGTGTGGGACTCTGTGAGGTTCTATGAAGAAGTGTTGGGCTTTGTTCTCATCAAACGCCCCTCTTCTTTCAACTTCAATGGAGCTTGGTTGTATAACTATGGGATTGGGATACACTTGATCGAAAGTCCAGCTATGGAGGACTTTGAACTCCGACCAATCAATCCCAAGGACAACCACATCTCCTTCCAATGCACTGATGTTGGACTTGTTAAGAGGAAGCTGCAAGAGATGGGGATGAGGTATGTTACTGCAGTGGTAGAGGACGATGGGATCAAGGTCGACCAGGTGTTCTTCCATGACCCAGATGGGTACATGATCGAGCTCTGCAACTGTGAGAACATCCCCATCATTCCTGTCTCTTCTTGTGCCTTCAAGCCCAGAGGTAGCAGCTTCAGTAAGGCACCAACTTCGTGCGGTTTCATGGAGACACTGATGATGGAAAGCTTGAGCCTGGACATGATGAACTTCTCATTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Glyoxalase

Protein Analysis

188

Amino Acids

21.27

Weight (kDa)

4.71

Isoelectric Point (pI)

54.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyoxalase PF00903 20 - 137 4e-11 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014637)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g12090 FvH4_1g12090
malus_domestica MD02G1110500.v1.1 MD15G1248200.v1.1
prunus_persica Prupe.7G165900_v2.0.a1
pyrus_communis pycom15g21850
rosa_chinensis RchiOBHm_Chr2g0099751
rosa_laevigata RLG00000016910
rosa_multiflora Rmu_sc0034974.1_g000001 Rmu_sc0034975.1_g000001
rosa_roxburghii Rroxscaffold_2G00142800
rosa_rugosa Rorug02G0082700
rosa_samantha Rh2AG132400 Rh2BG135200 Rh2CG136400 Rh2DG136900
rosa_wichuraiana Rw2G010240

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 487
AccI GTMKAC 1 cut(s) 366
AciI CCGC 1 cut(s) 501
AclWI GGATC 1 cut(s) 365
AcuI CTGAAG 1 cut(s) 463
AfaI GTAC 1 cut(s) 398
AgsI TTSAA 4 cut(s) 157, 163, 233, 460
AjnI CCWGG 2 cut(s) 369, 537
AluBI AGCT 7 cut(s) 33, 170, 218, 307, 409, 477, 531
AluI AGCT 7 cut(s) 33, 170, 218, 307, 409, 477, 531
Alw21I GWGCWC 1 cut(s) 411
Alw26I GTCTC 2 cut(s) 448, 506
AlwI GGATC 1 cut(s) 365
ApeKI GCWGC 2 cut(s) 307, 474
BanI GGYRCC 1 cut(s) 487
BanII GRGCYC 1 cut(s) 411
Bbv12I GWGCWC 1 cut(s) 411
BbvI GCAGC 2 cut(s) 294, 486
BccI CCATC 5 cut(s) 310, 347, 386, 440, 517
BcgI CGANNNNNNTGC 2 cut(s) 477, 511
BciT130I CCWGG 2 cut(s) 371, 539
BciVI GTATCC 1 cut(s) 189
BcoDI GTCTC 2 cut(s) 448, 506
BfmI CTRYAG 1 cut(s) 336
BfuI GTATCC 1 cut(s) 189
BisI GCNGC 2 cut(s) 308, 475
BlsI GCNGC 2 cut(s) 309, 476
Bme1390I CCNGG 2 cut(s) 371, 539
BmiI GGNNCC 1 cut(s) 489
BmrFI CCNGG 2 cut(s) 371, 539
BpuEI CTTGAG 1 cut(s) 553
BsaBI GATNNNNATC 1 cut(s) 14
BsaJI CCNNGG 1 cut(s) 252
BsaXI ACNNNNNCTCC 2 cut(s) 251, 281
Bse8I GATNNNNATC 1 cut(s) 14
BseBI CCWGG 2 cut(s) 371, 539
BseDI CCNNGG 1 cut(s) 252
BseGI GGATG 2 cut(s) 327, 426
BseJI GATNNNNATC 1 cut(s) 14
BseXI GCAGC 2 cut(s) 294, 486
BshNI GGYRCC 1 cut(s) 487
BsiHKAI GWGCWC 1 cut(s) 411
BslFI GGGAC 1 cut(s) 107
BsmAI GTCTC 2 cut(s) 448, 506
BsmFI GGGAC 1 cut(s) 107
Bsp1286I GDGCHC 1 cut(s) 411
Bsp143I GATC 5 cut(s) 15, 83, 204, 357, 402
BspACI CCGC 1 cut(s) 501
BspLI GGNNCC 1 cut(s) 489
BspMAI CTGCAG 1 cut(s) 340
BspPI GGATC 1 cut(s) 365
BspT107I GGYRCC 1 cut(s) 487
BssECI CCNNGG 1 cut(s) 252
BssMI GATC 5 cut(s) 15, 83, 204, 357, 402
BssT1I CCWWGG 1 cut(s) 252
Bst2UI CCWGG 2 cut(s) 371, 539
Bst4CI ACNGT 1 cut(s) 419
Bst6I CTCTTC 2 cut(s) 154, 451
BstF5I GGATG 2 cut(s) 327, 426
BstKTI GATC 5 cut(s) 18, 86, 207, 360, 405
BstMAI GTCTC 2 cut(s) 448, 506
BstMBI GATC 5 cut(s) 15, 83, 204, 357, 402
BstNI CCWGG 2 cut(s) 371, 539
BstSCI CCNGG 2 cut(s) 369, 537
BstSFI CTRYAG 1 cut(s) 336
BstV1I GCAGC 2 cut(s) 294, 486
BsuI GTATCC 1 cut(s) 189
BtsCI GGATG 2 cut(s) 327, 426
BtsI GCAGTG 2 cut(s) 41, 345
BtsIMutI CAGTG 5 cut(s) 41, 93, 279, 345, 515
CseI GACGC 1 cut(s) 13
CsiI ACCWGGT 1 cut(s) 369
Csp6I GTAC 1 cut(s) 397
CviAII CATG 5 cut(s) 65, 383, 400, 508, 544
CviQI GTAC 1 cut(s) 397
DpnI GATC 5 cut(s) 17, 85, 206, 359, 404
DpnII GATC 5 cut(s) 15, 83, 204, 357, 402
Eam1104I CTCTTC 2 cut(s) 154, 451
EarI CTCTTC 2 cut(s) 154, 451
Ecl136II GAGCTC 1 cut(s) 409
Eco130I CCWWGG 1 cut(s) 252
Eco24I GRGCYC 1 cut(s) 411
Eco53kI GAGCTC 1 cut(s) 409
Eco57I CTGAAG 1 cut(s) 463
EcoICRI GAGCTC 1 cut(s) 409
EcoRII CCWGG 2 cut(s) 369, 537
EcoT14I CCWWGG 1 cut(s) 252
EcoT38I GRGCYC 1 cut(s) 411
ErhI CCWWGG 1 cut(s) 252
FaeI CATG 5 cut(s) 68, 386, 403, 511, 547
FaqI GGGAC 1 cut(s) 107
FatI CATG 5 cut(s) 64, 382, 399, 507, 543
FblI GTMKAC 1 cut(s) 366
Fnu4HI GCNGC 2 cut(s) 308, 475
FokI GGATG 2 cut(s) 334, 413
FriOI GRGCYC 1 cut(s) 411
Fsp4HI GCNGC 2 cut(s) 308, 475
GluI GCNGC 2 cut(s) 308, 475
HgaI GACGC 1 cut(s) 13
Hin1II CATG 5 cut(s) 68, 386, 403, 511, 547
HincII GTYRAC 2 cut(s) 28, 367
HindII GTYRAC 2 cut(s) 28, 367
HindIII AAGCTT 1 cut(s) 529
HinfI GANTC 2 cut(s) 38, 95
HpaI GTTAAC 1 cut(s) 28
Hpy166II GTNNAC 2 cut(s) 28, 367
Hpy188I TCNGA 1 cut(s) 239
Hpy8I GTNNAC 2 cut(s) 28, 367
HpyAV CCTTC 2 cut(s) 280, 466
HpyCH4III ACNGT 1 cut(s) 419
HpyCH4V TGCA 5 cut(s) 81, 279, 310, 338, 414
Hsp92II CATG 5 cut(s) 68, 386, 403, 511, 547
KspAI GTTAAC 1 cut(s) 28
Kzo9I GATC 5 cut(s) 15, 83, 204, 357, 402
LmnI GCTCC 1 cut(s) 167
LpnPI CCDG 8 cut(s) 228, 356, 383, 402, 453, 478, 524, 551
Lsp1109I GCAGC 2 cut(s) 294, 486
MabI ACCWGGT 1 cut(s) 369
MaeIII GTNAC 3 cut(s) 39, 54, 331
MalI GATC 5 cut(s) 17, 85, 206, 359, 404
MboI GATC 5 cut(s) 15, 83, 204, 357, 402
MboII GAAGA 4 cut(s) 125, 141, 370, 438
MhlI GDGCHC 1 cut(s) 411
MlyI GAGTC 2 cut(s) 47, 89
MmeI TCCRAC 2 cut(s) 262, 268
MnlI CCTC 8 cut(s) 13, 96, 157, 217, 294, 318, 340, 461
MseI TTAA 2 cut(s) 27, 297
MspA1I CMGCKG 1 cut(s) 33
MspR9I CCNGG 2 cut(s) 371, 539
MvaI CCWGG 2 cut(s) 371, 539
NdeII GATC 5 cut(s) 15, 83, 204, 357, 402
NlaIII CATG 5 cut(s) 68, 386, 403, 511, 547
NlaIV GGNNCC 1 cut(s) 489
NmuCI GTSAC 2 cut(s) 39, 54
PkrI GCNGC 2 cut(s) 309, 476
PleI GAGTC 2 cut(s) 46, 89
PpsI GAGTC 2 cut(s) 46, 89
Psp124BI GAGCTC 1 cut(s) 411
Psp6I CCWGG 2 cut(s) 369, 537
PspGI CCWGG 2 cut(s) 369, 537
PspN4I GGNNCC 1 cut(s) 489
PstI CTGCAG 1 cut(s) 340
PvuII CAGCTG 1 cut(s) 33
RsaI GTAC 1 cut(s) 398
RsaNI GTAC 1 cut(s) 397
SacI GAGCTC 1 cut(s) 411
SalI GTCGAC 1 cut(s) 365
SaqAI TTAA 2 cut(s) 27, 297
SatI GCNGC 2 cut(s) 308, 475
Sau3AI GATC 5 cut(s) 15, 83, 204, 357, 402
SchI GAGTC 2 cut(s) 47, 89
ScrFI CCNGG 2 cut(s) 371, 539
SduI GDGCHC 1 cut(s) 411
SexAI ACCWGGT 1 cut(s) 369
SfcI CTRYAG 1 cut(s) 336
SmlI CTYRAG 1 cut(s) 532
SmoI CTYRAG 1 cut(s) 532
SsiI CCGC 1 cut(s) 501
SstI GAGCTC 1 cut(s) 411
StyD4I CCNGG 2 cut(s) 369, 537
StyI CCWWGG 1 cut(s) 252
TaaI ACNGT 1 cut(s) 419
TaqI TCGA 4 cut(s) 18, 207, 366, 405
Tru1I TTAA 2 cut(s) 27, 297
Tru9I TTAA 2 cut(s) 27, 297
TscAI CASTG 5 cut(s) 48, 93, 286, 345, 522
TseFI GTSAC 2 cut(s) 39, 54
TseI GCWGC 2 cut(s) 307, 474
Tsp45I GTSAC 2 cut(s) 39, 54
TspDTI ATGAA 3 cut(s) 126, 496, 563
TspRI CASTG 5 cut(s) 48, 93, 286, 345, 522
XcmI CCANNNNNNNNNTGG 1 cut(s) 389
XmiI GTMKAC 1 cut(s) 366
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.