RLG00000017146

Belongs to the peptidase M24B family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
13352308 .. 13353815
1508 bp
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UTR
Exon/CDS
Intron
RLM00000017146

Sequence Viewer

Length: 624 bp
ATGTCTAAATGTTATGTATCGTTACACATAGATTCGAGCTTGCAAAGTACTAAGCATGTTGCTTGCGAGAGTCCAATTTGTTTGGCGCTTATAACGAAGAATGAAGCTCGGCTATGGACAGATGGCCGTTACTTTTTGCAGGCAACACAGCAACTTAGTGACCAGTGGCAGCTTATGCGAATGGGGGAAGACCCTGCCGTAGATGTGTGGATGGCAGATTATCTCCCTGAAGGTTCAGCCATTGGTATCGACCCTTGGTGTATATCGGTAGACACCGCACAGAAATGGGAGCGCGCTTTTGTAGAATCAACAGAAGTTGGTTCAAACTTCCACAAATTTGATAAGTTGAAGGATGTGAGAAAAAAGCTCGTCCAAGTGAAAGCTCGTAGTATAATCATCTCAGCACTTGATGAGGTTTGCTGGTTTTATAATATTCGCGGGACTGATGTTGATTACAGTCCTGTTGTTCATGCCTTTGCCATAGTTACTCTGAACTCAGCGTTCTTCTATGTAGACAAAAGGAAGGTTTCAGGACTTTCATCTCAGATTCTCAGTTCACTCATATGTATCTATTTTCATCATCTTCTCAAGCAACATTCATATGGTGGTGAATACTGGTTTTAA

Protein Analysis

208

Amino Acids

23.73

Weight (kDa)

6.37

Isoelectric Point (pI)

42.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Creatinase_N PF01321 26 - 102 2.4e-06 Creatinase/Prolidase N-terminal domain
Creatinase_N_2 PF16189 114 - 178 2.6e-22 Creatinase/Prolidase N-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011160)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 92, 429
AccI GTMKAC 2 cut(s) 270, 513
AccII CGCG 2 cut(s) 294, 438
AciI CCGC 2 cut(s) 276, 438
AcoI YGGCCR 1 cut(s) 124
AcsI RAATTY 1 cut(s) 335
AcuI CTGAAG 1 cut(s) 249
AfaI GTAC 1 cut(s) 49
AgsI TTSAA 2 cut(s) 324, 349
AluBI AGCT 5 cut(s) 39, 107, 172, 367, 383
AluI AGCT 5 cut(s) 39, 107, 172, 367, 383
AoxI GGCC 1 cut(s) 124
ApeKI GCWGC 1 cut(s) 169
ApoI RAATTY 1 cut(s) 335
AspLEI GCGC 3 cut(s) 88, 294, 296
AsuHPI GGTGA 1 cut(s) 620
BbsI GAAGAC 1 cut(s) 195
BbvI GCAGC 1 cut(s) 181
BccI CCATC 2 cut(s) 116, 205
BceAI ACGGC 2 cut(s) 111, 182
BfoI RGCGCY 1 cut(s) 89
BisI GCNGC 1 cut(s) 170
BlsI GCNGC 1 cut(s) 171
BmcAI AGTACT 1 cut(s) 49
BpiI GAAGAC 1 cut(s) 195
BpuEI CTTGAG 1 cut(s) 572
BsaJI CCNNGG 1 cut(s) 254
Bse1I ACTGG 2 cut(s) 163, 620
BseDI CCNNGG 1 cut(s) 254
BseGI GGATG 2 cut(s) 216, 358
BseMII CTCAG 4 cut(s) 414, 510, 557, 565
BseNI ACTGG 2 cut(s) 163, 620
BsePI GCGCGC 1 cut(s) 292
BseXI GCAGC 1 cut(s) 181
Bsh1236I CGCG 2 cut(s) 294, 438
BshFI GGCC 1 cut(s) 126
BslFI GGGAC 1 cut(s) 454
BsmFI GGGAC 1 cut(s) 454
BsnI GGCC 1 cut(s) 126
BspACI CCGC 2 cut(s) 276, 438
BspANI GGCC 1 cut(s) 126
BspCNI CTCAG 4 cut(s) 413, 509, 556, 564
BspFNI CGCG 2 cut(s) 294, 438
BsrI ACTGG 2 cut(s) 163, 620
BssECI CCNNGG 1 cut(s) 254
BssHII GCGCGC 1 cut(s) 292
BssT1I CCWWGG 1 cut(s) 254
Bst4CI ACNGT 1 cut(s) 458
BstAPI GCANNNNNTGC 1 cut(s) 175
BstC8I GCNNGC 4 cut(s) 41, 64, 141, 294
BstDEI CTNAG 6 cut(s) 51, 155, 400, 496, 543, 551
BstF5I GGATG 2 cut(s) 216, 358
BstFNI CGCG 2 cut(s) 294, 438
BstH2I RGCGCY 1 cut(s) 89
BstHHI GCGC 3 cut(s) 88, 294, 296
BstMWI GCNNNNNNNGC 1 cut(s) 175
BstNSI RCATGY 1 cut(s) 59
BstUI CGCG 2 cut(s) 294, 438
BstV1I GCAGC 1 cut(s) 181
BstV2I GAAGAC 1 cut(s) 195
BsuRI GGCC 1 cut(s) 126
BtsCI GGATG 2 cut(s) 216, 358
BtsIMutI CAGTG 1 cut(s) 170
Cac8I GCNNGC 4 cut(s) 41, 64, 141, 294
CfoI GCGC 3 cut(s) 88, 294, 296
Csp6I GTAC 1 cut(s) 48
CviAII CATG 2 cut(s) 56, 470
CviJI RGCY 8 cut(s) 39, 107, 112, 126, 172, 239, 367, 383
CviKI_1 RGCY 8 cut(s) 39, 107, 112, 126, 172, 239, 367, 383
CviQI GTAC 1 cut(s) 48
DdeI CTNAG 6 cut(s) 51, 155, 400, 496, 543, 551
EaeI YGGCCR 1 cut(s) 124
Eco130I CCWWGG 1 cut(s) 254
Eco57I CTGAAG 1 cut(s) 249
EcoT14I CCWWGG 1 cut(s) 254
ErhI CCWWGG 1 cut(s) 254
FaeI CATG 2 cut(s) 59, 473
FaqI GGGAC 1 cut(s) 454
FatI CATG 2 cut(s) 55, 469
FauI CCCGC 1 cut(s) 431
FauNDI CATATG 2 cut(s) 563, 601
FblI GTMKAC 2 cut(s) 270, 513
Fnu4HI GCNGC 1 cut(s) 170
FokI GGATG 2 cut(s) 223, 365
Fsp4HI GCNGC 1 cut(s) 170
GlaI GCGC 3 cut(s) 87, 293, 295
GluI GCNGC 1 cut(s) 170
HaeII RGCGCY 1 cut(s) 89
HaeIII GGCC 1 cut(s) 126
HhaI GCGC 3 cut(s) 88, 294, 296
Hin1II CATG 2 cut(s) 59, 473
Hin6I GCGC 3 cut(s) 86, 292, 294
HinP1I GCGC 3 cut(s) 86, 292, 294
HinfI GANTC 4 cut(s) 32, 70, 305, 547
HphI GGTGA 1 cut(s) 620
Hpy166II GTNNAC 3 cut(s) 271, 514, 557
Hpy188I TCNGA 2 cut(s) 492, 546
Hpy188III TCNNGA 1 cut(s) 531
Hpy8I GTNNAC 3 cut(s) 271, 514, 557
HpyAV CCTTC 3 cut(s) 224, 343, 517
HpyCH4III ACNGT 1 cut(s) 458
HpyCH4V TGCA 2 cut(s) 43, 139
HpyF10VI GCNNNNNNNGC 1 cut(s) 175
HpyF3I CTNAG 6 cut(s) 51, 155, 400, 496, 543, 551
Hsp92II CATG 2 cut(s) 59, 473
HspAI GCGC 3 cut(s) 86, 292, 294
LmnI GCTCC 1 cut(s) 289
LpnPI CCDG 8 cut(s) 125, 176, 207, 240, 406, 474, 516, 601
Lsp1109I GCAGC 1 cut(s) 181
MaeIII GTNAC 4 cut(s) 21, 128, 158, 484
MboII GAAGA 4 cut(s) 109, 200, 496, 575
MluCI AATT 2 cut(s) 75, 335
MlyI GAGTC 1 cut(s) 79
MnlI CCTC 1 cut(s) 406
MseI TTAA 1 cut(s) 622
MslI CAYNNNNRTG 3 cut(s) 283, 562, 600
MvnI CGCG 2 cut(s) 294, 438
MwoI GCNNNNNNNGC 1 cut(s) 175
NdeI CATATG 2 cut(s) 563, 601
NlaIII CATG 2 cut(s) 59, 473
NmeAIII GCCGAG 1 cut(s) 88
NmuCI GTSAC 1 cut(s) 158
NspI RCATGY 1 cut(s) 59
PauI GCGCGC 1 cut(s) 292
PfeI GAWTC 3 cut(s) 32, 305, 547
PkrI GCNGC 1 cut(s) 171
PleI GAGTC 1 cut(s) 78
PpsI GAGTC 1 cut(s) 78
PsiI TTATAA 2 cut(s) 92, 429
PteI GCGCGC 1 cut(s) 292
RsaI GTAC 1 cut(s) 49
RsaNI GTAC 1 cut(s) 48
RseI CAYNNNNRTG 3 cut(s) 283, 562, 600
SaqAI TTAA 1 cut(s) 622
SatI GCNGC 1 cut(s) 170
ScaI AGTACT 1 cut(s) 49
SchI GAGTC 1 cut(s) 79
SetI ASST 8 cut(s) 41, 109, 174, 235, 369, 385, 417, 528
SmiMI CAYNNNNRTG 3 cut(s) 283, 562, 600
SmlI CTYRAG 1 cut(s) 587
SmoI CTYRAG 1 cut(s) 587
Sse9I AATT 2 cut(s) 75, 335
SsiI CCGC 2 cut(s) 276, 438
SspI AATATT 1 cut(s) 433
StyI CCWWGG 1 cut(s) 254
TaaI ACNGT 1 cut(s) 458
TaqI TCGA 2 cut(s) 35, 249
TasI AATT 2 cut(s) 75, 335
TatI WGTACW 1 cut(s) 47
TfiI GAWTC 3 cut(s) 32, 305, 547
Tru1I TTAA 1 cut(s) 622
Tru9I TTAA 1 cut(s) 622
TscAI CASTG 1 cut(s) 170
TseFI GTSAC 1 cut(s) 158
TseI GCWGC 1 cut(s) 169
Tsp45I GTSAC 1 cut(s) 158
TspDTI ATGAA 5 cut(s) 117, 458, 528, 566, 588
TspRI CASTG 1 cut(s) 170
XapI RAATTY 1 cut(s) 335
XceI RCATGY 1 cut(s) 59
XmiI GTMKAC 2 cut(s) 270, 513
ZrmI AGTACT 1 cut(s) 49
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.