Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0011160

Physical Location & Seq

Genomic Coordinates Reverse (-)

78852518 .. 78857805

Gene Structure 5288 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00140610.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGGCGGATACTCTGAGCGCTTTGAGGTCTCTAATGGCGTCTCACTCTCCTCCTCTTGATGCCTTGGTTGTTCCTTCCGAAGATTACCACCAGAGTGAATATGTTTCTGACAGAGACAAAAGGCGTCAATTCGTTTCTGGCTTCACTGGAAGCGCCGGTTTGGCGCTTATAACCAAGAATGAAGCTCGGTTATGGACAGATGGCCGTTACTTTTTGCAGGCAACGCAGCAACTTAGTGACCAGTGGCAGCTTATGCGAATGGGGGAAGACCCTGCCGTAGATGTCTGGATGGCAGATTATCTCCCTGAAGGTTCAGCCATTGGTATCGACCCTTGGTGTATATCGGTAGACACCGCACAGAAATGGGAGCGTGCTTTTGTCAAGAATCAACAGAAGTTGGTTCAAACTTCCACAAATTTGGTAGATGAAGTTTGGAAAAGTCAGCCCCCTCAGGAAATTAATCCTGTAGTTATTCATCCTTTGGAATTTGCTGGTCGTTCTGTAGAAGATAAGTTGAAGGATTTGAGAAAAAAGCTCATCCAAGTGAAAGCTCATAGCATAATCATCTCAGCACTTGATGAGGTTTGCTGGCTGTATAATATTCGCGGGACAGATGTTGATTACAGTCCAGTTGTTCATGCCTTTGCCATAGTTACTCTGAACTCAGCGTTCTTCTATGTGGACAAAAGGAAGGTTTCATCTGAGGTAAACTCATACTTGGAAACGAACGGAATTGAAGTTCGGGACTATAAAGCAGTGAGCGCAGATGTCAGCTTGCTTGCATCTAATCAGCTTAAACCTTCTATTCAAGGCAAGGGAACTGAAACTGGAATAGCAGGAAATGGTACAATCAAAGCAGAAGAAAGTAATAATGACCTCATATGGGCTGACCCGGGTTATTGCTGTTATGCTTTGTATTCAAAGCTAAATCCTGACAAGGTTCTCTTGCAGCCGTCACCTTTGGCCCTTGCAAAAGCTCTAAAGAACCCAATTGAGTTGGAAGGGTTAAAGAATGCTCACATTCGAGATGGTGCGGCTGTTGTGCAATATCATGTCTGGTTGGATAAACAGATGCAGGAGATGTATGGAGCTTCTGGTTTCTTTTTGGAGGATGAAACAGATAAGAAAAAACAGTCCTTTGGAAAGTTTTCTGAGCTTTCTGATACTGATGCTCATATGAAAACTGCAAAACTAACTGAGGTGACTGCAAGCGATAAGCTGGAAGGCTTTCGAGCATCAAAAGAGAACTTTAGAGGATTAAGCTTCCCTACTATCTCCTCGGTTGGTCCAAATGCTGCCATTATCCATTATTCACCACAAGCAGAAACTTGTGCTGAGTTGGATCCAGACCGCATATATCTTTTTGACTCTGGAGCACAGTATCTGGATGGAACAACTGACATAACACGGACAGTTCATTTCGGGAAACCTTCAGCTCATGAGAAAGCATGCTATACGGCAGTCCTCAAGGGTCACATTGCTCTAGGGAATGCTCGTTTTCCTAATGGAACCAATGGTCATTCCCTGGACATTCTGGCTCGAGTTCCTTTGTGGAAGGATGGTCTCGATTATCGACATGGTACTGGTCATGGGATTGGATCTTACCTAAATGTTCATGAAGGACCTCATTTAATTAGCTTCAGACCTCGAAATGTCCCACTGGAAGATACCATGACTGTAACAGATGAACCTGGGTACTATGAAGATGGAAATTTTGGTATAAGACTGGAGAACGTGCTTATAATCAAGAAAGCTGATACAAAATTCAACTTTGGTGACAAGGGCTACTTGCAATTTGAGCATATAACATGGGTAGCTTCGTCACACTATCAAATTGAATTAGCTGGCTTAAATTCTTCTCCTTCCATGATGAGTGCACTGTATGGTTTGAATGCTATGCTAAAGGCACCCTACCAGAGGAAGTTAATTGACGTGGGCCTTTTAACACCCGAAGAGTTGGAATGGCTGAACACCTACCATGCCAATTGTAGATCTATTCTGGACTCATACTTGGATGAATCTGAGAAGGCATGGCTGAAGAAAGCCACTGAACCCATTAGTGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004177 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0006508 GO:0006807 GO:0006810 GO:0008144 GO:0008150 GO:0008152 GO:0008233 GO:0008238 GO:0008270 GO:0009914 GO:0009926 GO:0010013 GO:0010817 GO:0016020 GO:0016787 GO:0019538 GO:0030145 GO:0031406 GO:0033218 GO:0033293 GO:0036094 GO:0043167 GO:0043168 GO:0043169 GO:0043170 GO:0043177 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0051179 GO:0051234 GO:0060918 GO:0065007 GO:0065008 GO:0070011 GO:0071704 GO:0071944 GO:0097159 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Creatinase_N Creatinase_N_2 Peptidase_M24 Peptidase_M24_C

Protein Analysis

688

Amino Acids

76.72

Weight (kDa)

5.55

Isoelectric Point (pI)

32.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Creatinase_N	PF01321	6 - 138	9.4e-14	Creatinase/Prolidase N-terminal domain
Creatinase_N_2	PF16189	148 - 332	6e-46	Creatinase/Prolidase N-terminal domain
Peptidase_M24	PF00557	396 - 583	1.7e-47	Metallopeptidase family M24
Peptidase_M24_C	PF16188	635 - 686	6.1e-19	C-terminal region of peptidase_M24

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011160)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G36760 AT4G36760 AT4G36760
fragaria_vesca	FvH4_1g13980
malus_domestica	MD02G1152800.v1.1 MD15G1267200.v1.1
prunus_persica	Prupe.7G149300_v2.0.a1
pyrus_communis	pycom02g12060 pycom15g23280
rosa_chinensis	RchiOBHm_Chr2g0102281
rosa_laevigata	RLG00000017142 RLG00000017146
rosa_multiflora	Rmu_sc0005055.1_g000022 Rmu_sc0030874.1_g000002
rosa_roxburghii	Rroxscaffold_2G00140610
rosa_rugosa	Rorug02G0106100
rosa_samantha	Rh2AG154100 Rh2CG159700 Rh2DG159700
rosa_wichuraiana	Rw2G012050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	170, 1742
AccB1I	GGYRCC	1 cut(s)	1906
AccI	GTMKAC	1 cut(s)	348
AccII	CGCG	1 cut(s)	606
AciI	CCGC	5 cut(s)	5, 354, 606, 1034, 1351
AclWI	GGATC	3 cut(s)	1337, 1350, 1606
AcoI	YGGCCR	1 cut(s)	202
AcsI	RAATTY	5 cut(s)	415, 485, 1711, 1763, 1852
AcuI	CTGAAG	4 cut(s)	327, 1416, 1624, 2057
AcyI	GRCGYC	2 cut(s)	38, 124
AfaI	GTAC	3 cut(s)	847, 1582, 1697
AfeI	AGCGCT	1 cut(s)	19
AfiI	CCNNNNNNNGG	2 cut(s)	883, 1917
AgsI	TTSAA	8 cut(s)	404, 517, 737, 809, 921, 1768, 1838, 1891
AjiI	CACGTC	1 cut(s)	1933
AjnI	CCWGG	2 cut(s)	1524, 1690
AleI	CACNNNNGTG	1 cut(s)	93
AloI	GAACNNNNNNTCC	2 cut(s)	723, 755
Alw21I	GWGCWC	2 cut(s)	1378, 1879
Alw26I	GTCTC	4 cut(s)	33, 45, 108, 1568
Alw44I	GTGCAC	1 cut(s)	1875
AlwI	GGATC	3 cut(s)	1337, 1350, 1606
AlwNI	CAGNNNCTG	1 cut(s)	1384
Ama87I	CYCGRG	2 cut(s)	892, 1539
Aor51HI	AGCGCT	1 cut(s)	19
AoxI	GGCC	3 cut(s)	202, 963, 1936
ApaLI	GTGCAC	1 cut(s)	1875
ApeKI	GCWGC	4 cut(s)	226, 247, 949, 1295
ApoI	RAATTY	5 cut(s)	415, 485, 1711, 1763, 1852
AseI	ATTAAT	1 cut(s)	459
Asp700I	GAANNNNTTC	2 cut(s)	1147, 1227
AspLEI	GCGC	4 cut(s)	20, 155, 166, 764
AspS9I	GGNCC	4 cut(s)	964, 1286, 1622, 1936
AsuC2I	CCSGG	2 cut(s)	893, 894
AsuHPI	GGTGA	4 cut(s)	948, 1213, 1305, 1787
AvaI	CYCGRG	2 cut(s)	892, 1539
AvaII	GGWCC	2 cut(s)	1286, 1622
AxyI	CCTNAGG	1 cut(s)	450
BaeGI	GKGCMC	1 cut(s)	1879
BamHI	GGATCC	1 cut(s)	1342
BanI	GGYRCC	1 cut(s)	1906
BbsI	GAAGAC	1 cut(s)	273
Bbv12I	GWGCWC	2 cut(s)	1378, 1879
BbvI	GCAGC	4 cut(s)	238, 259, 961, 1282
BccI	CCATC	6 cut(s)	194, 283, 1022, 1382, 1553, 1700
BceAI	ACGGC	4 cut(s)	189, 260, 937, 1473
BciT130I	CCWGG	2 cut(s)	1526, 1692
BcnI	CCSGG	2 cut(s)	893, 894
BcoDI	GTCTC	4 cut(s)	33, 45, 108, 1568
BfaI	CTAG	1 cut(s)	1484
BfmI	CTRYAG	2 cut(s)	465, 501
BfoI	RGCGCY	3 cut(s)	21, 156, 167
BglI	GCCNNNNNGGC	1 cut(s)	161
BglII	AGATCT	1 cut(s)	1991
BisI	GCNGC	5 cut(s)	227, 248, 950, 1035, 1296
BlsI	GCNGC	5 cut(s)	228, 249, 951, 1036, 1297
Bme1390I	CCNGG	4 cut(s)	893, 894, 1526, 1692
Bme18I	GGWCC	2 cut(s)	1286, 1622
BmeT110I	CYCGRG	2 cut(s)	892, 1539
BmgBI	CACGTC	1 cut(s)	1933
BmgT120I	GGNCC	4 cut(s)	964, 1286, 1622, 1936
BmiI	GGNNCC	3 cut(s)	1344, 1510, 1908
BmrFI	CCNGG	4 cut(s)	893, 894, 1526, 1692
BmsI	GCATC	5 cut(s)	49, 791, 1062, 1159, 1244
BpiI	GAAGAC	1 cut(s)	273
BplI	GAGNNNNNCTC	2 cut(s)	695, 727
BpmI	CTGGAG	2 cut(s)	1392, 1748
BpuEI	CTTGAG	1 cut(s)	1451
BpuMI	CCSGG	2 cut(s)	893, 894
BsaHI	GRCGYC	2 cut(s)	38, 124
BsaI	GGTCTC	2 cut(s)	33, 1568
BsaJI	CCNNGG	6 cut(s)	63, 332, 892, 1278, 1524, 1691
Bsc4I	CCNNNNNNNGG	2 cut(s)	883, 1917
Bse118I	RCCGGY	1 cut(s)	155
Bse1I	ACTGG	7 cut(s)	151, 241, 629, 832, 1588, 1665, 1731
Bse21I	CCTNAGG	1 cut(s)	450
Bse3DI	GCAATG	1 cut(s)	1476
BseBI	CCWGG	2 cut(s)	1526, 1692
BseDI	CCNNGG	6 cut(s)	63, 332, 892, 1278, 1524, 1691
BseGI	GGATG	7 cut(s)	294, 475, 537, 1117, 1393, 1564, 2020
BseLI	CCNNNNNNNGG	2 cut(s)	883, 1917
BseMI	GCAATG	1 cut(s)	1476
BseMII	CTCAG	9 cut(s)	5, 464, 582, 678, 693, 1143, 1188, 1326, 2013
BseNI	ACTGG	7 cut(s)	151, 241, 629, 832, 1588, 1665, 1731
BseRI	GAGGAG	3 cut(s)	39, 42, 1267
BseSI	GKGCMC	1 cut(s)	1879
BseXI	GCAGC	4 cut(s)	238, 259, 961, 1282
Bsh1236I	CGCG	1 cut(s)	606
BshFI	GGCC	3 cut(s)	204, 965, 1938
BshNI	GGYRCC	1 cut(s)	1906
BsiHKAI	GWGCWC	2 cut(s)	1378, 1879
BsiHKCI	CYCGRG	2 cut(s)	892, 1539
BsiSI	CCGG	2 cut(s)	156, 893
BslFI	GGGAC	3 cut(s)	622, 758, 1640
BslI	CCNNNNNNNGG	2 cut(s)	883, 1917
BsmAI	GTCTC	4 cut(s)	33, 45, 108, 1568
BsmBI	CGTCTC	1 cut(s)	45
BsmFI	GGGAC	3 cut(s)	622, 758, 1640
BsmI	GAATGC	3 cut(s)	1018, 1495, 1897
BsnI	GGCC	3 cut(s)	204, 965, 1938
Bso31I	GGTCTC	2 cut(s)	33, 1568
BsoBI	CYCGRG	2 cut(s)	892, 1539
Bsp1286I	GDGCHC	2 cut(s)	1378, 1879
Bsp143I	GATC	3 cut(s)	1342, 1598, 1991
BspACI	CCGC	5 cut(s)	5, 354, 606, 1034, 1351
BspANI	GGCC	3 cut(s)	204, 965, 1938
BspCNI	CTCAG	9 cut(s)	6, 463, 581, 677, 694, 1144, 1189, 1327, 2014
BspFNI	CGCG	1 cut(s)	606
BspHI	TCATGA	2 cut(s)	1438, 1615
BspLI	GGNNCC	3 cut(s)	1344, 1510, 1908
BspPI	GGATC	3 cut(s)	1337, 1350, 1606
BspT107I	GGYRCC	1 cut(s)	1906
BspTNI	GGTCTC	2 cut(s)	33, 1568
BsrDI	GCAATG	1 cut(s)	1476
BsrFI	RCCGGY	1 cut(s)	155
BsrI	ACTGG	7 cut(s)	151, 241, 629, 832, 1588, 1665, 1731
BssAI	RCCGGY	1 cut(s)	155
BssECI	CCNNGG	6 cut(s)	63, 332, 892, 1278, 1524, 1691
BssMI	GATC	3 cut(s)	1342, 1598, 1991
BssNI	GRCGYC	2 cut(s)	38, 124
BssT1I	CCWWGG	2 cut(s)	63, 332
Bst2UI	CCWGG	2 cut(s)	1526, 1692
Bst4CI	ACNGT	6 cut(s)	626, 1134, 1380, 1414, 1678, 1881
Bst6I	CTCTTC	1 cut(s)	1947
BstACI	GRCGYC	2 cut(s)	38, 124
BstAPI	GCANNNNNTGC	1 cut(s)	253
BstC8I	GCNNGC	8 cut(s)	219, 372, 590, 776, 780, 1210, 1450, 1846
BstENI	CCTNNNNNAGG	1 cut(s)	1915
BstF5I	GGATG	7 cut(s)	294, 475, 537, 1117, 1393, 1564, 2020
BstFNI	CGCG	1 cut(s)	606
BstH2I	RGCGCY	3 cut(s)	21, 156, 167
BstHHI	GCGC	4 cut(s)	20, 155, 166, 764
BstKTI	GATC	3 cut(s)	1345, 1601, 1994
BstMAI	GTCTC	4 cut(s)	33, 45, 108, 1568
BstMBI	GATC	3 cut(s)	1342, 1598, 1991
BstMWI	GCNNNNNNNGC	5 cut(s)	161, 223, 253, 761, 1798
BstNI	CCWGG	2 cut(s)	1526, 1692
BstNSI	RCATGY	1 cut(s)	1452
BstSCI	CCNGG	4 cut(s)	891, 892, 1524, 1690
BstSFI	CTRYAG	2 cut(s)	465, 501
BstSLI	GKGCMC	1 cut(s)	1879
BstUI	CGCG	1 cut(s)	606
BstV1I	GCAGC	4 cut(s)	238, 259, 961, 1282
BstV2I	GAAGAC	1 cut(s)	273
BstX2I	RGATCY	3 cut(s)	1342, 1598, 1991
BstXI	CCANNNNNNTGG	1 cut(s)	418
BstYI	RGATCY	3 cut(s)	1342, 1598, 1991
Bsu36I	CCTNAGG	1 cut(s)	450
BsuRI	GGCC	3 cut(s)	204, 965, 1938
BtrI	CACGTC	1 cut(s)	1933
BtsCI	GGATG	7 cut(s)	294, 475, 537, 1117, 1393, 1564, 2020
BtsI	GCAGTG	1 cut(s)	762
BtsIMutI	CAGTG	6 cut(s)	144, 248, 762, 1658, 1877, 2046
Cac8I	GCNNGC	8 cut(s)	219, 372, 590, 776, 780, 1210, 1450, 1846
CaiI	CAGNNNCTG	1 cut(s)	1384
CciI	TCATGA	2 cut(s)	1438, 1615
CfoI	GCGC	4 cut(s)	20, 155, 166, 764
Cfr10I	RCCGGY	1 cut(s)	155
Cfr13I	GGNCC	4 cut(s)	964, 1286, 1622, 1936
Cfr9I	CCCGGG	1 cut(s)	892
CseI	GACGC	2 cut(s)	27, 113
Csp6I	GTAC	3 cut(s)	846, 1581, 1696
CviQI	GTAC	3 cut(s)	846, 1581, 1696
DpnI	GATC	3 cut(s)	1344, 1600, 1993
DpnII	GATC	3 cut(s)	1342, 1598, 1991
EaeI	YGGCCR	1 cut(s)	202
Eam1104I	CTCTTC	1 cut(s)	1947
EarI	CTCTTC	1 cut(s)	1947
EciI	GGCGGA	1 cut(s)	20
Eco130I	CCWWGG	2 cut(s)	63, 332
Eco31I	GGTCTC	2 cut(s)	33, 1568
Eco47I	GGWCC	2 cut(s)	1286, 1622
Eco47III	AGCGCT	1 cut(s)	19
Eco57I	CTGAAG	4 cut(s)	327, 1416, 1624, 2057
Eco81I	CCTNAGG	1 cut(s)	450
Eco88I	CYCGRG	2 cut(s)	892, 1539
EcoNI	CCTNNNNNAGG	1 cut(s)	1915
EcoO109I	RGGNCCY	1 cut(s)	1622
EcoRII	CCWGG	2 cut(s)	1524, 1690
EcoT14I	CCWWGG	2 cut(s)	63, 332
ErhI	CCWWGG	2 cut(s)	63, 332
Esp3I	CGTCTC	1 cut(s)	45
FalI	AAGNNNNNCTT	4 cut(s)	929, 961, 1772, 1804
FaqI	GGGAC	3 cut(s)	622, 758, 1640
FauI	CCCGC	1 cut(s)	599
FauNDI	CATATG	2 cut(s)	881, 1176
FblI	GTMKAC	1 cut(s)	348
Fnu4HI	GCNGC	5 cut(s)	227, 248, 950, 1035, 1296
FokI	GGATG	7 cut(s)	301, 462, 524, 1124, 1400, 1571, 2027
Fsp4HI	GCNGC	5 cut(s)	227, 248, 950, 1035, 1296
FspBI	CTAG	1 cut(s)	1484
GlaI	GCGC	4 cut(s)	19, 154, 165, 763
GluI	GCNGC	5 cut(s)	227, 248, 950, 1035, 1296
GsuI	CTGGAG	2 cut(s)	1392, 1748
HaeII	RGCGCY	3 cut(s)	21, 156, 167
HaeIII	GGCC	3 cut(s)	204, 965, 1938
HapII	CCGG	2 cut(s)	156, 893
HgaI	GACGC	2 cut(s)	27, 113
HhaI	GCGC	4 cut(s)	20, 155, 166, 764
Hin1I	GRCGYC	2 cut(s)	38, 124
Hin6I	GCGC	4 cut(s)	18, 153, 164, 762
HinP1I	GCGC	4 cut(s)	18, 153, 164, 762
HindIII	AAGCTT	1 cut(s)	1261
HinfI	GANTC	4 cut(s)	385, 1367, 2003, 2018
HpaII	CCGG	2 cut(s)	156, 893
HphI	GGTGA	4 cut(s)	948, 1213, 1305, 1787
Hpy166II	GTNNAC	4 cut(s)	349, 682, 709, 1877
Hpy188I	TCNGA	9 cut(s)	15, 79, 109, 660, 703, 1153, 1162, 1643, 2023
Hpy8I	GTNNAC	4 cut(s)	349, 682, 709, 1877
HpyCH4III	ACNGT	6 cut(s)	626, 1134, 1380, 1414, 1678, 1881
HpyCH4IV	ACGT	2 cut(s)	1734, 1932
HpyF10VI	GCNNNNNNNGC	5 cut(s)	161, 223, 253, 761, 1798
HpySE526I	ACGT	2 cut(s)	1734, 1932
Hsp92I	GRCGYC	2 cut(s)	38, 124
HspAI	GCGC	4 cut(s)	18, 153, 164, 762
Kzo9I	GATC	3 cut(s)	1342, 1598, 1991
LmnI	GCTCC	3 cut(s)	367, 1088, 1373
Lsp1109I	GCAGC	4 cut(s)	238, 259, 961, 1282
LweI	GCATC	5 cut(s)	49, 791, 1062, 1159, 1244
MaeI	CTAG	1 cut(s)	1484
MaeII	ACGT	2 cut(s)	1734, 1932
MaeIII	GTNAC	9 cut(s)	206, 236, 652, 954, 1201, 1472, 1678, 1775, 1821
MalI	GATC	3 cut(s)	1344, 1600, 1993
MboI	GATC	3 cut(s)	1342, 1598, 1991
MfeI	CAATTG	2 cut(s)	990, 1984
MflI	RGATCY	3 cut(s)	1342, 1598, 1991
MhlI	GDGCHC	2 cut(s)	1378, 1879
MlyI	GAGTC	2 cut(s)	1361, 1997
MmeI	TCCRAC	4 cut(s)	978, 1041, 1320, 1938
MroXI	GAANNNNTTC	2 cut(s)	1147, 1227
MseI	TTAA	8 cut(s)	459, 795, 1007, 1259, 1631, 1850, 1925, 1943
MslI	CAYNNNNRTG	4 cut(s)	93, 361, 542, 2060
MspI	CCGG	2 cut(s)	156, 893
MspR9I	CCNGG	4 cut(s)	893, 894, 1526, 1692
MunI	CAATTG	2 cut(s)	990, 1984
Mva1269I	GAATGC	3 cut(s)	1018, 1495, 1897
MvaI	CCWGG	2 cut(s)	1526, 1692
MvnI	CGCG	1 cut(s)	606
MwoI	GCNNNNNNNGC	5 cut(s)	161, 223, 253, 761, 1798
NciI	CCSGG	2 cut(s)	893, 894
NdeI	CATATG	2 cut(s)	881, 1176
NdeII	GATC	3 cut(s)	1342, 1598, 1991
NlaIV	GGNNCC	3 cut(s)	1344, 1510, 1908
NmuCI	GTSAC	6 cut(s)	236, 954, 1201, 1472, 1775, 1821
NspI	RCATGY	1 cut(s)	1452
OliI	CACNNNNGTG	1 cut(s)	93
PaeI	GCATGC	1 cut(s)	1452
PaeR7I	CTCGAG	1 cut(s)	1539
PagI	TCATGA	2 cut(s)	1438, 1615
PctI	GAATGC	3 cut(s)	1018, 1495, 1897
PdmI	GAANNNNTTC	2 cut(s)	1147, 1227
PfeI	GAWTC	2 cut(s)	385, 2018
PkrI	GCNGC	5 cut(s)	228, 249, 951, 1036, 1297
PleI	GAGTC	2 cut(s)	1361, 1997
PpsI	GAGTC	2 cut(s)	1361, 1997
PpuMI	RGGWCCY	1 cut(s)	1622
PshBI	ATTAAT	1 cut(s)	459
PsiI	TTATAA	2 cut(s)	170, 1742
Psp5II	RGGWCCY	1 cut(s)	1622
Psp6I	CCWGG	2 cut(s)	1524, 1690
PspGI	CCWGG	2 cut(s)	1524, 1690
PspN4I	GGNNCC	3 cut(s)	1344, 1510, 1908
PspPI	GGNCC	4 cut(s)	964, 1286, 1622, 1936
PspPPI	RGGWCCY	1 cut(s)	1622
PspXI	VCTCGAGB	1 cut(s)	1539
PstNI	CAGNNNCTG	1 cut(s)	1384
PsuI	RGATCY	3 cut(s)	1342, 1598, 1991
RsaI	GTAC	3 cut(s)	847, 1582, 1697
RsaNI	GTAC	3 cut(s)	846, 1581, 1696
RseI	CAYNNNNRTG	4 cut(s)	93, 361, 542, 2060
SaqAI	TTAA	8 cut(s)	459, 795, 1007, 1259, 1631, 1850, 1925, 1943
SatI	GCNGC	5 cut(s)	227, 248, 950, 1035, 1296
Sau3AI	GATC	3 cut(s)	1342, 1598, 1991
Sau96I	GGNCC	4 cut(s)	964, 1286, 1622, 1936
SchI	GAGTC	2 cut(s)	1361, 1997
ScrFI	CCNGG	4 cut(s)	893, 894, 1526, 1692
SduI	GDGCHC	2 cut(s)	1378, 1879
SfaNI	GCATC	5 cut(s)	49, 791, 1062, 1159, 1244
SfcI	CTRYAG	2 cut(s)	465, 501
Sfr274I	CTCGAG	1 cut(s)	1539
SinI	GGWCC	2 cut(s)	1286, 1622
SlaI	CTCGAG	1 cut(s)	1539
SmaI	CCCGGG	1 cut(s)	894
SmiMI	CAYNNNNRTG	4 cut(s)	93, 361, 542, 2060
SmlI	CTYRAG	2 cut(s)	1466, 1539
SmoI	CTYRAG	2 cut(s)	1466, 1539
SphI	GCATGC	1 cut(s)	1452
SsiI	CCGC	5 cut(s)	5, 354, 606, 1034, 1351
SspI	AATATT	1 cut(s)	601
SspMI	CTAG	1 cut(s)	1484
StyD4I	CCNGG	4 cut(s)	891, 892, 1524, 1690
StyI	CCWWGG	2 cut(s)	63, 332
TaaI	ACNGT	6 cut(s)	626, 1134, 1380, 1414, 1678, 1881
TaiI	ACGT	2 cut(s)	1737, 1935
TaqI	TCGA	7 cut(s)	327, 1024, 1231, 1540, 1566, 1573, 1648
TauI	GCSGC	1 cut(s)	1037
TfiI	GAWTC	2 cut(s)	385, 2018
Tru1I	TTAA	8 cut(s)	459, 795, 1007, 1259, 1631, 1850, 1925, 1943
Tru9I	TTAA	8 cut(s)	459, 795, 1007, 1259, 1631, 1850, 1925, 1943
TscAI	CASTG	6 cut(s)	151, 248, 762, 1665, 1884, 2053
TseFI	GTSAC	6 cut(s)	236, 954, 1201, 1472, 1775, 1821
TseI	GCWGC	4 cut(s)	226, 247, 949, 1295
Tsp45I	GTSAC	6 cut(s)	236, 954, 1201, 1472, 1775, 1821
TspGWI	ACGGA	2 cut(s)	744, 1423
TspMI	CCCGGG	1 cut(s)	892
TspRI	CASTG	6 cut(s)	151, 248, 762, 1665, 1884, 2053
VneI	GTGCAC	1 cut(s)	1875
VpaK11BI	GGWCC	2 cut(s)	1286, 1622
VspI	ATTAAT	1 cut(s)	459
XagI	CCTNNNNNAGG	1 cut(s)	1915
XapI	RAATTY	5 cut(s)	415, 485, 1711, 1763, 1852
XceI	RCATGY	1 cut(s)	1452
XhoI	CTCGAG	1 cut(s)	1539
XmaI	CCCGGG	1 cut(s)	892
XmiI	GTMKAC	1 cut(s)	348
XmnI	GAANNNNTTC	2 cut(s)	1147, 1227
XspI	CTAG	1 cut(s)	1484

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.