RLG00000019478

G-type lectin S-receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
52515660 .. 52518041
2382 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019478

Sequence Viewer

Length: 1854 bp
ATGGCTAGCCAACAACATTCAGGCCGGATTTATCCCGGTTTCCAAACATCTCAGATGGAATGGAACAATAATTCGGGGTGGTTCCTTCTGTCCAACAACTCAGCATTTGCTCTTGGATTCTACCAAGGCCTTGATGTCGTTGATGTCAAGTCGTTTTTACTCGTGGTCTATTACTTGGGTGCATCTAAAGCGGTTTGGACTGCCAATAGAGGCATGCTGGTTGCTAATTTTGATAAGTTTGTCTTTGACAAAGATGGGAGTGTCTACTTGGAAAGCGGCGATGATAAGGTTTGGTCTACCAACACAACGGGACAAGTAGTTACAGCCATGGAATTGCGGGATTCCGGGAACTTGGTGTTGCTTGGAGAGAACGGAAGCATTCTTTGGCAGAGTTTTAGCCACCCAACTGATACTCTTTTACCGGGTCAGGAGTTCTTGGAAGGAATGAAACTCAAGAGCTTTCGGAACAAGAACAACTTGTCTAATTATCTTGAGATTCAGTCAGGCGAGTTGGTTCTGTATGCTGGATATCAAACTCCACAGATCTATTGGTCAATAGCAGATGAAAGCAGGAAAAGCAATAACAATGTCAGTGGAAAGGTTCACTCTGTGTCTCTGGTGTCCAATTCATTGAGTTTCTATGATCAAAGTAAAACCTTACTTTGGCAGTTTGTTTTCTCTGACAACAAAGATCCGAATGCCTTCTGGGCCGCTGTTTTAGGCCCGGAAGGCTCAATCACCTTCCTTGATTTTCAGAAAGGAAGGTCTGTTGTCCCTGAAGCAACTAAGATCCCACAAGAGTCTTGCAGCCTTCCTGAGCATTGTGAGCCTTACTTTGTATGCTATTTTGATGGTTGTGATCTCAGCACAGCAACCAAGAATTTCTCCACAAAAATTGGCCAAGGAGGGTTTGGTTCAGTCTATCTAGGTGTTCTTCCAGATGGCATCCAACTTGCGGTGAAAAAGTTAGAGGGACAATTTCAAGGGAAGAAAGAGTTCAGAGCAGAAGTCACTATTATTGGGAAAATTCGACATGTCCATTTGGTCAAGCTCAGAGGCTTCTGTGCAGAAGGAATTCACAGGCTACTTGTTTATGAGTACATGGGAAAAGGGTCTTTGGATAAATGGATATTCAACAGCAATAAAAAGGATGATCAATTTCTGGATTGGAACACAAGGTTCAGTATTGCATTGGGAACTGCAAAGGGGCTGGCTTATCTCCATGAAGAATGTGAAGAGAAGATTGTTCACTGTGATATAAAACCTGAAAATGTGCTTCTTGATGACAACTTTAATGCCAAAGTTTCAGATTTTGGATTGGCCAAGCTGATGAACCGGGAGGAAAGCCTTGTACACACGACATTGAGGGGCACGAGAGGTTACCTTGCACCAGAATGGCTCACCAATTATGCCATATCGGAGAAGAGTGATGTGTACAGTTATGGCATGGTCTTGCTTGAGATTATAGCTGGAAAAAGGAACTTTGCTCCTGGGGAGAGTTCCGGGAAATCCCACTTTCCTTCTTATGCCTGTAGGCGGTTGGAAGAGGGCAACTTGAAAGAGTTCATTGATCCAAAGCTTGATATTGATGAAAATGATGAAAGAGTAGTGGCTGCAATCAATGTAGCATTATGGTGTATTCAGGATGAGATGCAAATGAGGCCTCCCATGACTAAGGTAGTCCAAATGCTTGAAGGTCTTTGTGATCTACCACCACCGCCTACATCCTCCCCAAAGTTGGTTTCTCATTTGAGTTTCTTACAATGGAGCAGCAAAGAAGCTAGTTCATCAGCTCCCAGTGACTACTATACTGATATACCCATGTCAGATGTTCGGCTCTCGGGGCCAAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

618

Amino Acids

69.12

Weight (kDa)

5.52

Isoelectric Point (pI)

31.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B_lectin PF01453 65 - 146 2.5e-16 D-mannose binding lectin
PK_Tyr_Ser-Thr PF07714 295 - 564 1e-42 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 296 - 562 1.5e-48 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 264, 296
AciI CCGC 7 cut(s) 191, 276, 337, 711, 956, 1537, 1718
AclWI GGATC 3 cut(s) 686, 784, 1565
AcoI YGGCCR 2 cut(s) 898, 1320
AcsI RAATTY 3 cut(s) 880, 1026, 1074
AcuI CTGAAG 1 cut(s) 798
AdeI CACNNNGTG 1 cut(s) 610
AfaI GTAC 3 cut(s) 1100, 1353, 1436
AfiI CCNNNNNNNGG 4 cut(s) 663, 955, 1536, 1738
AflIII ACRYGT 1 cut(s) 1033
AgsI TTSAA 4 cut(s) 983, 1135, 1558, 1694
AjnI CCWGG 1 cut(s) 1489
AjuI GAANNNNNNNTTGG 4 cut(s) 367, 399, 1726, 1758
AluBI AGCT 7 cut(s) 459, 1051, 1327, 1469, 1579, 1781, 1793
AluI AGCT 7 cut(s) 459, 1051, 1327, 1469, 1579, 1781, 1793
Alw26I GTCTC 1 cut(s) 618
AlwI GGATC 3 cut(s) 686, 784, 1565
Ama87I CYCGRG 1 cut(s) 1840
AoxI GGCC 8 cut(s) 22, 127, 708, 721, 898, 1320, 1661, 1844
ApeKI GCWGC 3 cut(s) 807, 1613, 1770
ApoI RAATTY 3 cut(s) 880, 1026, 1074
Asp700I GAANNNNTTC 4 cut(s) 701, 995, 1074, 1562
AspS9I GGNCC 3 cut(s) 708, 722, 1844
AsuC2I CCSGG 6 cut(s) 36, 346, 423, 725, 1337, 1504
AsuHPI GGTGA 3 cut(s) 730, 970, 1393
AsuNHI GCTAGC 1 cut(s) 5
AvaI CYCGRG 1 cut(s) 1840
BaeGI GKGCMC 1 cut(s) 1373
BalI TGGCCA 2 cut(s) 900, 1322
BauI CACGAG 2 cut(s) 161, 1372
BbvI GCAGC 3 cut(s) 819, 1600, 1782
BccI CCATC 4 cut(s) 49, 248, 845, 935
BciT130I CCWGG 1 cut(s) 1491
BclI TGATCA 2 cut(s) 643, 1153
BcnI CCSGG 6 cut(s) 36, 346, 423, 725, 1337, 1504
BcoDI GTCTC 1 cut(s) 618
BfaI CTAG 3 cut(s) 6, 926, 1782
BfmI CTRYAG 1 cut(s) 1531
BglI GCCNNNNNGGC 2 cut(s) 707, 729
BglII AGATCT 1 cut(s) 543
BisI GCNGC 5 cut(s) 277, 711, 808, 1614, 1771
BlsI GCNGC 5 cut(s) 278, 712, 809, 1615, 1772
Bme1390I CCNGG 7 cut(s) 36, 346, 423, 725, 1337, 1491, 1504
BmeT110I CYCGRG 1 cut(s) 1840
BmgT120I GGNCC 3 cut(s) 708, 722, 1844
BmiI GGNNCC 2 cut(s) 83, 1845
BmrFI CCNGG 7 cut(s) 36, 346, 423, 725, 1337, 1491, 1504
BmrI ACTGGG 1 cut(s) 1791
BmsI GCATC 3 cut(s) 191, 954, 1641
BmtI GCTAGC 1 cut(s) 9
BmuI ACTGGG 1 cut(s) 1791
Bpu10I CCTNAGC 1 cut(s) 816
BpuEI CTTGAG 3 cut(s) 437, 512, 1478
BpuMI CCSGG 6 cut(s) 36, 346, 423, 725, 1337, 1504
BsaJI CCNNGG 5 cut(s) 124, 327, 901, 1490, 1847
Bsc4I CCNNNNNNNGG 4 cut(s) 663, 955, 1536, 1738
Bse1I ACTGG 1 cut(s) 1797
BseBI CCWGG 1 cut(s) 1491
BseDI CCNNGG 5 cut(s) 124, 327, 901, 1490, 1847
BseGI GGATG 4 cut(s) 945, 1156, 1651, 1724
BseLI CCNNNNNNNGG 4 cut(s) 663, 955, 1536, 1738
BseMII CTCAG 5 cut(s) 65, 114, 807, 877, 1066
BseNI ACTGG 1 cut(s) 1797
BseSI GKGCMC 1 cut(s) 1373
BseXI GCAGC 3 cut(s) 819, 1600, 1782
BsgI GTGCAG 1 cut(s) 1086
BshFI GGCC 8 cut(s) 24, 129, 710, 723, 900, 1322, 1663, 1846
BsiHKCI CYCGRG 1 cut(s) 1840
BsiSI CCGG 7 cut(s) 25, 36, 345, 422, 725, 1336, 1503
BslFI GGGAC 3 cut(s) 324, 758, 987
BslI CCNNNNNNNGG 4 cut(s) 663, 955, 1536, 1738
BsmAI GTCTC 1 cut(s) 618
BsmFI GGGAC 3 cut(s) 324, 758, 987
BsmI GAATGC 2 cut(s) 378, 703
BsnI GGCC 8 cut(s) 24, 129, 710, 723, 900, 1322, 1663, 1846
BsoBI CYCGRG 1 cut(s) 1840
Bsp1286I GDGCHC 1 cut(s) 1373
Bsp1407I TGTACA 2 cut(s) 1351, 1434
Bsp143I GATC 8 cut(s) 543, 643, 691, 789, 859, 1153, 1570, 1705
Bsp19I CCATGG 1 cut(s) 327
BspACI CCGC 7 cut(s) 191, 276, 337, 711, 956, 1537, 1718
BspANI GGCC 8 cut(s) 24, 129, 710, 723, 900, 1322, 1663, 1846
BspCNI CTCAG 5 cut(s) 64, 113, 808, 876, 1065
BspLI GGNNCC 2 cut(s) 83, 1845
BspOI GCTAGC 1 cut(s) 9
BspPI GGATC 3 cut(s) 686, 784, 1565
BsrGI TGTACA 2 cut(s) 1351, 1434
BsrI ACTGG 1 cut(s) 1797
BssECI CCNNGG 5 cut(s) 124, 327, 901, 1490, 1847
BssMI GATC 8 cut(s) 543, 643, 691, 789, 859, 1153, 1570, 1705
BssSI CACGAG 2 cut(s) 161, 1372
BssT1I CCWWGG 4 cut(s) 124, 327, 901, 1847
Bst2BI CACGAG 2 cut(s) 161, 1372
Bst2UI CCWGG 1 cut(s) 1491
Bst4CI ACNGT 2 cut(s) 1253, 1439
Bst6I CTCTTC 3 cut(s) 1230, 1418, 1539
BstAUI TGTACA 2 cut(s) 1351, 1434
BstC8I GCNNGC 3 cut(s) 7, 215, 1212
BstDEI CTNAG 7 cut(s) 51, 100, 786, 816, 863, 1052, 1674
BstDSI CCRYGG 1 cut(s) 327
BstEII GGTNACC 1 cut(s) 1379
BstF5I GGATG 4 cut(s) 945, 1156, 1651, 1724
BstKTI GATC 8 cut(s) 546, 646, 694, 792, 862, 1156, 1573, 1708
BstMAI GTCTC 1 cut(s) 618
BstMBI GATC 8 cut(s) 543, 643, 691, 789, 859, 1153, 1570, 1705
BstMWI GCNNNNNNNGC 7 cut(s) 188, 576, 707, 729, 826, 1660, 1843
BstNI CCWGG 1 cut(s) 1491
BstNSI RCATGY 2 cut(s) 217, 1037
BstPI GGTNACC 1 cut(s) 1379
BstSCI CCNGG 7 cut(s) 34, 344, 421, 723, 1335, 1489, 1502
BstSFI CTRYAG 1 cut(s) 1531
BstSLI GKGCMC 1 cut(s) 1373
BstV1I GCAGC 3 cut(s) 819, 1600, 1782
BstX2I RGATCY 3 cut(s) 543, 691, 789
BstYI RGATCY 3 cut(s) 543, 691, 789
BsuRI GGCC 8 cut(s) 24, 129, 710, 723, 900, 1322, 1663, 1846
BtgI CCRYGG 1 cut(s) 327
BtgZI GCGATG 1 cut(s) 294
BtsCI GGATG 4 cut(s) 945, 1156, 1651, 1724
BtsIMutI CAGTG 3 cut(s) 598, 1249, 1804
Cac8I GCNNGC 3 cut(s) 7, 215, 1212
Cfr13I GGNCC 3 cut(s) 708, 722, 1844
Csp6I GTAC 3 cut(s) 1099, 1352, 1435
CspCI CAANNNNNGTGG 4 cut(s) 574, 609, 877, 912
CviAII CATG 8 cut(s) 214, 328, 1034, 1102, 1223, 1447, 1669, 1822
CviQI GTAC 3 cut(s) 1099, 1352, 1435
DdeI CTNAG 7 cut(s) 51, 100, 786, 816, 863, 1052, 1674
DpnI GATC 8 cut(s) 545, 645, 693, 791, 861, 1155, 1572, 1707
DpnII GATC 8 cut(s) 543, 643, 691, 789, 859, 1153, 1570, 1705
DraIII CACNNNGTG 1 cut(s) 610
EaeI YGGCCR 2 cut(s) 898, 1320
Eam1104I CTCTTC 3 cut(s) 1230, 1418, 1539
EarI CTCTTC 3 cut(s) 1230, 1418, 1539
Eco130I CCWWGG 4 cut(s) 124, 327, 901, 1847
Eco147I AGGCCT 2 cut(s) 129, 1663
Eco32I GATATC 1 cut(s) 530
Eco57I CTGAAG 1 cut(s) 798
Eco88I CYCGRG 1 cut(s) 1840
Eco91I GGTNACC 1 cut(s) 1379
EcoO65I GGTNACC 1 cut(s) 1379
EcoRI GAATTC 1 cut(s) 1074
EcoRII CCWGG 1 cut(s) 1489
EcoRV GATATC 1 cut(s) 530
EcoT14I CCWWGG 4 cut(s) 124, 327, 901, 1847
ErhI CCWWGG 4 cut(s) 124, 327, 901, 1847
FaeI CATG 8 cut(s) 217, 331, 1037, 1105, 1226, 1450, 1672, 1825
FalI AAGNNNNNCTT 4 cut(s) 227, 259, 461, 493
FaqI GGGAC 3 cut(s) 324, 758, 987
FatI CATG 8 cut(s) 213, 327, 1033, 1101, 1222, 1446, 1668, 1821
FauI CCCGC 1 cut(s) 330
FbaI TGATCA 2 cut(s) 643, 1153
FblI GTMKAC 2 cut(s) 264, 296
Fnu4HI GCNGC 5 cut(s) 277, 711, 808, 1614, 1771
FokI GGATG 4 cut(s) 932, 1163, 1658, 1711
Fsp4HI GCNGC 5 cut(s) 277, 711, 808, 1614, 1771
FspBI CTAG 3 cut(s) 6, 926, 1782
GluI GCNGC 5 cut(s) 277, 711, 808, 1614, 1771
HaeIII GGCC 8 cut(s) 24, 129, 710, 723, 900, 1322, 1663, 1846
HapII CCGG 7 cut(s) 25, 36, 345, 422, 725, 1336, 1503
Hin1II CATG 8 cut(s) 217, 331, 1037, 1105, 1226, 1450, 1672, 1825
HindIII AAGCTT 1 cut(s) 1577
HinfI GANTC 4 cut(s) 117, 341, 496, 800
HpaII CCGG 7 cut(s) 25, 36, 345, 422, 725, 1336, 1503
HphI GGTGA 3 cut(s) 730, 970, 1393
Hpy166II GTNNAC 6 cut(s) 265, 297, 604, 1249, 1354, 1435
Hpy188III TCNNGA 8 cut(s) 428, 454, 491, 815, 938, 1163, 1280, 1643
Hpy8I GTNNAC 6 cut(s) 265, 297, 604, 1249, 1354, 1435
HpyCH4III ACNGT 2 cut(s) 1253, 1439
HpyCH4V TGCA 8 cut(s) 182, 807, 1067, 1190, 1202, 1388, 1616, 1654
HpyF10VI GCNNNNNNNGC 7 cut(s) 188, 576, 707, 729, 826, 1660, 1843
HpyF3I CTNAG 7 cut(s) 51, 100, 786, 816, 863, 1052, 1674
Hsp92II CATG 8 cut(s) 217, 331, 1037, 1105, 1226, 1450, 1672, 1825
Ksp22I TGATCA 2 cut(s) 643, 1153
Kzo9I GATC 8 cut(s) 543, 643, 691, 789, 859, 1153, 1570, 1705
LmnI GCTCC 3 cut(s) 1492, 1767, 1798
Lsp1109I GCAGC 3 cut(s) 819, 1600, 1782
LweI GCATC 3 cut(s) 191, 954, 1641
MaeI CTAG 3 cut(s) 6, 926, 1782
MaeIII GTNAC 4 cut(s) 319, 1009, 1379, 1799
MalI GATC 8 cut(s) 545, 645, 693, 791, 861, 1155, 1572, 1707
MboI GATC 8 cut(s) 543, 643, 691, 789, 859, 1153, 1570, 1705
MboII GAAGA 7 cut(s) 926, 1000, 1238, 1247, 1252, 1435, 1556
MflI RGATCY 3 cut(s) 543, 691, 789
MhlI GDGCHC 1 cut(s) 1373
MlsI TGGCCA 2 cut(s) 900, 1322
MluNI TGGCCA 2 cut(s) 900, 1322
MlyI GAGTC 1 cut(s) 809
MmeI TCCRAC 3 cut(s) 117, 973, 1521
Mox20I TGGCCA 2 cut(s) 900, 1322
MroXI GAANNNNTTC 4 cut(s) 701, 995, 1074, 1562
MscI TGGCCA 2 cut(s) 900, 1322
MseI TTAA 1 cut(s) 1293
MslI CAYNNNNRTG 2 cut(s) 1393, 1633
Msp20I TGGCCA 2 cut(s) 900, 1322
MspA1I CMGCKG 1 cut(s) 713
MspI CCGG 7 cut(s) 25, 36, 345, 422, 725, 1336, 1503
MspR9I CCNGG 7 cut(s) 36, 346, 423, 725, 1337, 1491, 1504
Mva1269I GAATGC 2 cut(s) 378, 703
MvaI CCWGG 1 cut(s) 1491
MwoI GCNNNNNNNGC 7 cut(s) 188, 576, 707, 729, 826, 1660, 1843
NciI CCSGG 6 cut(s) 36, 346, 423, 725, 1337, 1504
NcoI CCATGG 1 cut(s) 327
NdeII GATC 8 cut(s) 543, 643, 691, 789, 859, 1153, 1570, 1705
NheI GCTAGC 1 cut(s) 5
NlaIII CATG 8 cut(s) 217, 331, 1037, 1105, 1226, 1450, 1672, 1825
NlaIV GGNNCC 2 cut(s) 83, 1845
NmuCI GTSAC 2 cut(s) 1009, 1799
NspI RCATGY 2 cut(s) 217, 1037
PaeI GCATGC 1 cut(s) 217
PceI AGGCCT 2 cut(s) 129, 1663
PciI ACATGT 1 cut(s) 1033
PctI GAATGC 2 cut(s) 378, 703
PdmI GAANNNNTTC 4 cut(s) 701, 995, 1074, 1562
PfeI GAWTC 3 cut(s) 117, 341, 496
PfoI TCCNGGA 2 cut(s) 344, 1502
PkrI GCNGC 5 cut(s) 278, 712, 809, 1615, 1772
PleI GAGTC 1 cut(s) 808
PpsI GAGTC 1 cut(s) 808
PscI ACATGT 1 cut(s) 1033
Psp6I CCWGG 1 cut(s) 1489
PspEI GGTNACC 1 cut(s) 1379
PspGI CCWGG 1 cut(s) 1489
PspN4I GGNNCC 2 cut(s) 83, 1845
PspPI GGNCC 3 cut(s) 708, 722, 1844
PsuI RGATCY 3 cut(s) 543, 691, 789
RsaI GTAC 3 cut(s) 1100, 1353, 1436
RsaNI GTAC 3 cut(s) 1099, 1352, 1435
RseI CAYNNNNRTG 2 cut(s) 1393, 1633
SaqAI TTAA 1 cut(s) 1293
SatI GCNGC 5 cut(s) 277, 711, 808, 1614, 1771
Sau3AI GATC 8 cut(s) 543, 643, 691, 789, 859, 1153, 1570, 1705
Sau96I GGNCC 3 cut(s) 708, 722, 1844
SchI GAGTC 1 cut(s) 809
ScrFI CCNGG 7 cut(s) 36, 346, 423, 725, 1337, 1491, 1504
SduI GDGCHC 1 cut(s) 1373
SfaNI GCATC 3 cut(s) 191, 954, 1641
SfcI CTRYAG 1 cut(s) 1531
SmiMI CAYNNNNRTG 2 cut(s) 1393, 1633
SmlI CTYRAG 3 cut(s) 452, 491, 1457
SmoI CTYRAG 3 cut(s) 452, 491, 1457
SphI GCATGC 1 cut(s) 217
SseBI AGGCCT 2 cut(s) 129, 1663
SsiI CCGC 7 cut(s) 191, 276, 337, 711, 956, 1537, 1718
SspMI CTAG 3 cut(s) 6, 926, 1782
StuI AGGCCT 2 cut(s) 129, 1663
StyD4I CCNGG 7 cut(s) 34, 344, 421, 723, 1335, 1489, 1502
StyI CCWWGG 4 cut(s) 124, 327, 901, 1847
TaaI ACNGT 2 cut(s) 1253, 1439
TaqI TCGA 1 cut(s) 1030
TatI WGTACW 3 cut(s) 1098, 1351, 1434
TauI GCSGC 2 cut(s) 279, 713
TfiI GAWTC 3 cut(s) 117, 341, 496
Tru1I TTAA 1 cut(s) 1293
Tru9I TTAA 1 cut(s) 1293
TscAI CASTG 3 cut(s) 598, 1256, 1804
TseFI GTSAC 2 cut(s) 1009, 1799
TseI GCWGC 3 cut(s) 807, 1613, 1770
Tsp45I GTSAC 2 cut(s) 1009, 1799
TspDTI ATGAA 9 cut(s) 461, 579, 618, 1239, 1346, 1555, 1605, 1614, 1776
TspGWI ACGGA 1 cut(s) 387
TspRI CASTG 3 cut(s) 598, 1256, 1804
XapI RAATTY 3 cut(s) 880, 1026, 1074
XceI RCATGY 2 cut(s) 217, 1037
XcmI CCANNNNNNNNNTGG 2 cut(s) 546, 908
XmiI GTMKAC 2 cut(s) 264, 296
XmnI GAANNNNTTC 4 cut(s) 701, 995, 1074, 1562
XspI CTAG 3 cut(s) 6, 926, 1782
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.