Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0008150

Physical Location & Seq

Genomic Coordinates Forward (+)

56504498 .. 56509076

Gene Structure 4579 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG377400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2448 bp

ATGGGTTCGTTCCAGTTTAGAAACTTGTGTTTCTGTCTCCTCCTTGTGTACTTCAAATCCTGCATGGCTAGCCAACAACATTCAGGCCGGATTTATCCCGGTTTCCAAACATCTCAGATGGAATGGAACAATAATTCGGGGTGGTTCCTTCTGTCCAACAACTCAGCATTTGCTCTTGGATTCTACCAAGGCCTTGATGTCGTTGATGTCAAGTCGTTTTTACTCGTGGTCTATCACTTGGGTGCATCTAAAGCGGTTTGGACTGCTAATAGAGGCATGCTGGTTGCTAATTTTGATAAGTTTGTCTTTGACAAAGATGGGAGTGTCTACTTGGAAAGCGGCGATGATAAGGTTTGGTCTACCAACACAACGGGAGAAGTAGTTACAGCCATGGAATTGCGGGATTCGGGAAACTTGGTGTTGCTTGGAGAGAAAGGAAGCATTCTTTGGCAGAGTTTTAGCCACCCAACTGATACTCTTTTACCGGGTCAGGAGTTCTTGGAAGGAATGAAACTCAAGAGCTTTCGGAACAAGAACAACTTGTCTAATTATCTTGAGATTCAGTCAGGCGAGTTGGTTCTGTATGCTGGATATCAAACTCCACAGATCTATTGGTCAATAGCAGATGAAAGCAGGAAAAGCAATAACAATGTCAGTGGAAAGGTTCACTCTGTGTCTCTGGTGTCCAATTCATTGAGTTTCTATGATCAAAGTAAAACCTTACTTTGGCAATTTGTTTTCTCTGACAACAAAGATCCGAATGCCTTCTGGGGCGCTGTTTTAGGCCCGGAAGGCTCAATCACCTTCCTTGATTTTCAGAAAGGAAGGTCTGTTGTCCCTGAAGCAACTAAGATCCCACAAGAGTCTTGCAGCCTTCCTGAGCATTGTGAACCTTACTTTGTATGCTATTTTGATGGTTGGTGCCAATGCCCTTCACCTCTCCTCTCTCGCTTTAATTGCGCACCTCAAGCAGTCCCAACATGTAGTACCTCCAAAAGTCCAGTGGACCTTTTGTTTGTTGGTGAGAAGCTTGACTACTTTGCACTGGGTTTTACAAAACCCTCTTTGAAATCTAGTCTGGATTCCTGCAAAGAAGCTTGCCTTGGTAATTGTTCTTGCCTTGTGTTGTTCTTTGAAAACAGTACTGGAGATTGTTTTCTGTTTGACCAGGTGGGAAGTTTCCAACGATCTCTTGGGAATGACACTGGTTATACTGCATATATGAAAGTCTTCGATTTAGACAGGAAATCAAACCGAAATGGAAGAAAGCACGCACTTGTCGTTGTGGCCATTTTGATTGCAACAATCGTAGTTGTTGCTGGTCTACTTTATGTGGGATTTGGGTACTACCGAAAGAAGAAGAGATTATTGGAGTACTCTCAAGAAATCTTGGAAGAGGACAAGTTCTTGGACAGTCTGTCTGGAATGCCGATACGCTTCACATACAGTGATCTCTGCACAGCAACCAAGAATTTCTCCACAAAAATTGGCCAAGGAGGGTTTGGTTCAGTCTATCTAGGTGTTCTTCCAGATGGCATCCAACTTGCAGTGAAAAAGTTAGAGGGACAATTTCAAGGGAAGAAAGAGTTCAGAGCAGAAGTCACTATTATTGGGAAAATTCGACATGTCCATTTGGTCAAGCTCAGAGGCTTCTGTGCAGAAGGAATTCACAGGCTACTCGTTTATGAGTACATGGGAAAAGGGTCTTTGGATAAATGGATATTCAACAACAATAAAAAGGAGGATCAATTTCTGGATTGGAACACAAGATTCAGTATTGCATTGGGAACTGCAAAGGGGCTGGCTTATCTCCATGAAGAATGTGAAGAGAAGATTGTTCACTGTGATATAAAACCTGAAAATGTGCTTCTTGATGACAACTTTAATGCCAAAGTTTCAGATTTCGGATTGGCCAAGCTGATGAATCGGGAGGAAAGCCTTGTACACACGACATTGAGGGGCACGAGAGGTTACCTTGCACCAGAATGGCTCACCAATTATGCCATATCGGAGAAGAGTGATGTGTACAGTTATGGCATGGTCTTGCTTGAGATTATAGCTGGAAAAAGGAACTTTGCTCCTGGGGAGAGTTCCGGGAAATCCCACTTTCCTTCTTATGCCTGTAGGCAGTTGGAAGAGGGCAACTTGAAAGAGTTCATTGATCCAAAGCTTGATATTGATGAAAATGATGAAAGAGTTGTGGCTGCAATCAATGTAGCATTATGGTGTATTCAGGATGAGATGCAAATGAGGCCTCCCATGACTAAGGTAGTTCAAATGCTTGAAGGTCTTTGTGATCTACCACCACCACCTACATCCTCCCCAAAGTCGGTTTCTCATTTGAGTTTCTTACAATGGAGCAGCAAAGAAGCTAGTTCATCAGCAGGACTCAGTGACTACTATACTGATATACCCATGTCAGATGTTCGGCTCTCGGGGCCAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

B_lectin PAN_1 Pkinase

Protein Analysis

815

Amino Acids

91.31

Weight (kDa)

5.96

Isoelectric Point (pI)

33.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
B_lectin	PF01453	86 - 167	4.8e-16	D-mannose binding lectin
PK_Tyr_Ser-Thr	PF07714	492 - 761	7.1e-43	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	493 - 759	1.2e-48	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008150)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g29821 FvH4_6g29840
malus_domestica	MD17G1210300.v1.1
prunus_persica	Prupe.3G085600_v2.0.a1
pyrus_communis	pycom17g21560
rosa_chinensis	RchiOBHm_Chr2g0135701
rosa_laevigata	RLG00000019478 RLG00000019479
rosa_multiflora	Rmu_co8459773.1_g000001 Rmu_sc0002398.1_g000047 Rmu_sc0007848.1_g000046
rosa_roxburghii	Rroxscaffold_2G00108980 Rroxscaffold_2G00109000
rosa_rugosa	Rorug02G0324900 Rorug02G0325100
rosa_samantha	Rh2AG377400 Rh2AG377500 Rh2BG383700 Rh2BG383800 Rh2CG362900 Rh2CG363000 Rh2DG400100
rosa_wichuraiana	Rw2G030740 Rw2G030750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	961
AccB1I	GGYRCC	1 cut(s)	921
AccI	GTMKAC	3 cut(s)	327, 359, 1324
AciI	CCGC	3 cut(s)	254, 339, 400
AclWI	GGATC	4 cut(s)	749, 847, 1752, 2156
AcoI	YGGCCR	3 cut(s)	1287, 1489, 1911
AcsI	RAATTY	3 cut(s)	1471, 1617, 1665
AcuI	CTGAAG	1 cut(s)	861
AdeI	CACNNNGTG	1 cut(s)	673
AfaI	GTAC	8 cut(s)	50, 988, 1144, 1346, 1376, 1691, 1944, 2027
AfiI	CCNNNNNNNGG	2 cut(s)	726, 2329
AflIII	ACRYGT	2 cut(s)	980, 1624
AgsI	TTSAA	8 cut(s)	55, 1069, 1136, 1574, 1726, 2149, 2276, 2285
AhdI	GACNNNNNGTC	1 cut(s)	1417
AjnI	CCWGG	2 cut(s)	1167, 2080
AjuI	GAANNNNNNNTTGG	8 cut(s)	430, 462, 1086, 1118, 1352, 1384, 2317, 2349
AleI	CACNNNNGTG	1 cut(s)	240
AluBI	AGCT	8 cut(s)	522, 1030, 1097, 1642, 1918, 2060, 2170, 2372
AluI	AGCT	8 cut(s)	522, 1030, 1097, 1642, 1918, 2060, 2170, 2372
Alw26I	GTCTC	2 cut(s)	41, 681
AlwI	GGATC	4 cut(s)	749, 847, 1752, 2156
Ama87I	CYCGRG	1 cut(s)	2434
AoxI	GGCC	8 cut(s)	85, 190, 784, 1287, 1489, 1911, 2252, 2438
ApeKI	GCWGC	3 cut(s)	870, 2204, 2361
ApoI	RAATTY	3 cut(s)	1471, 1617, 1665
ArsI	GACNNNNNNTTYG	2 cut(s)	998, 1030
Asp700I	GAANNNNTTC	5 cut(s)	764, 1229, 1586, 1665, 2153
AspLEI	GCGC	2 cut(s)	776, 962
AspS9I	GGNCC	3 cut(s)	785, 1006, 2438
AsuC2I	CCSGG	4 cut(s)	99, 486, 788, 2095
AsuHPI	GGTGA	4 cut(s)	793, 927, 1034, 1984
AsuNHI	GCTAGC	1 cut(s)	68
AvaI	CYCGRG	1 cut(s)	2434
AvaII	GGWCC	1 cut(s)	1006
BaeGI	GKGCMC	1 cut(s)	1964
BalI	TGGCCA	3 cut(s)	1289, 1491, 1913
BanI	GGYRCC	1 cut(s)	921
BarI	GAAGNNNNNNTAC	2 cut(s)	1019, 1051
BauI	CACGAG	2 cut(s)	224, 1963
BbsI	GAAGAC	1 cut(s)	1222
BbvI	GCAGC	3 cut(s)	882, 2191, 2373
BccI	CCATC	4 cut(s)	112, 311, 908, 1526
BciT130I	CCWGG	2 cut(s)	1169, 2082
BclI	TGATCA	1 cut(s)	706
BcnI	CCSGG	4 cut(s)	99, 486, 788, 2095
BcoDI	GTCTC	2 cut(s)	41, 681
BfaI	CTAG	4 cut(s)	69, 1074, 1517, 2373
BfmI	CTRYAG	1 cut(s)	2122
BfoI	RGCGCY	1 cut(s)	777
BglI	GCCNNNNNGGC	1 cut(s)	792
BglII	AGATCT	1 cut(s)	606
BisI	GCNGC	4 cut(s)	340, 871, 2205, 2362
BlsI	GCNGC	4 cut(s)	341, 872, 2206, 2363
BmcAI	AGTACT	2 cut(s)	1144, 1376
Bme1390I	CCNGG	6 cut(s)	99, 486, 788, 1169, 2082, 2095
Bme18I	GGWCC	1 cut(s)	1006
BmeRI	GACNNNNNGTC	1 cut(s)	1417
BmeT110I	CYCGRG	1 cut(s)	2434
BmgT120I	GGNCC	3 cut(s)	785, 1006, 2438
BmiI	GGNNCC	3 cut(s)	146, 923, 2439
BmrFI	CCNGG	6 cut(s)	99, 486, 788, 1169, 2082, 2095
BmrI	ACTGGG	1 cut(s)	1055
BmsI	GCATC	3 cut(s)	254, 1545, 2232
BmtI	GCTAGC	1 cut(s)	72
BmuI	ACTGGG	1 cut(s)	1055
BpiI	GAAGAC	1 cut(s)	1222
BpmI	CTGGAG	1 cut(s)	1167
Bpu10I	CCTNAGC	1 cut(s)	879
BpuEI	CTTGAG	5 cut(s)	500, 575, 951, 1365, 2069
BpuMI	CCSGG	4 cut(s)	99, 486, 788, 2095
BsaJI	CCNNGG	6 cut(s)	187, 390, 1102, 1492, 2081, 2441
BsaXI	ACNNNNNCTCC	2 cut(s)	366, 396
Bsc4I	CCNNNNNNNGG	2 cut(s)	726, 2329
Bse1I	ACTGG	5 cut(s)	13, 1001, 1050, 1150, 1210
BseBI	CCWGG	2 cut(s)	1169, 2082
BseDI	CCNNGG	6 cut(s)	187, 390, 1102, 1492, 2081, 2441
BseGI	GGATG	3 cut(s)	1536, 2242, 2315
BseLI	CCNNNNNNNGG	2 cut(s)	726, 2329
BseMII	CTCAG	5 cut(s)	128, 177, 870, 1657, 2404
BseNI	ACTGG	5 cut(s)	13, 1001, 1050, 1150, 1210
BseRI	GAGGAG	2 cut(s)	29, 932
BseSI	GKGCMC	1 cut(s)	1964
BseXI	GCAGC	3 cut(s)	882, 2191, 2373
BsgI	GTGCAG	2 cut(s)	1441, 1677
BshFI	GGCC	8 cut(s)	87, 192, 786, 1289, 1491, 1913, 2254, 2440
BshNI	GGYRCC	1 cut(s)	921
BsiHKCI	CYCGRG	1 cut(s)	2434
BsiSI	CCGG	5 cut(s)	88, 99, 485, 788, 2094
BslFI	GGGAC	3 cut(s)	821, 959, 1578
BslI	CCNNNNNNNGG	2 cut(s)	726, 2329
BsmAI	GTCTC	2 cut(s)	41, 681
BsmFI	GGGAC	3 cut(s)	821, 959, 1578
BsmI	GAATGC	3 cut(s)	441, 766, 1431
BsnI	GGCC	8 cut(s)	87, 192, 786, 1289, 1491, 1913, 2254, 2440
BsoBI	CYCGRG	1 cut(s)	2434
Bsp1286I	GDGCHC	1 cut(s)	1964
Bsp1407I	TGTACA	2 cut(s)	1942, 2025
Bsp143I	GATC	9 cut(s)	606, 706, 754, 852, 1187, 1450, 1744, 2161, 2296
Bsp19I	CCATGG	1 cut(s)	390
BspACI	CCGC	3 cut(s)	254, 339, 400
BspANI	GGCC	8 cut(s)	87, 192, 786, 1289, 1491, 1913, 2254, 2440
BspCNI	CTCAG	5 cut(s)	127, 176, 871, 1656, 2403
BspLI	GGNNCC	3 cut(s)	146, 923, 2439
BspOI	GCTAGC	1 cut(s)	72
BspPI	GGATC	4 cut(s)	749, 847, 1752, 2156
BspT107I	GGYRCC	1 cut(s)	921
BsrGI	TGTACA	2 cut(s)	1942, 2025
BsrI	ACTGG	5 cut(s)	13, 1001, 1050, 1150, 1210
BssECI	CCNNGG	6 cut(s)	187, 390, 1102, 1492, 2081, 2441
BssMI	GATC	9 cut(s)	606, 706, 754, 852, 1187, 1450, 1744, 2161, 2296
BssSI	CACGAG	2 cut(s)	224, 1963
BssT1I	CCWWGG	5 cut(s)	187, 390, 1102, 1492, 2441
Bst2BI	CACGAG	2 cut(s)	224, 1963
Bst2UI	CCWGG	2 cut(s)	1169, 2082
Bst4CI	ACNGT	5 cut(s)	1142, 1415, 1448, 1844, 2030
Bst6I	CTCTTC	5 cut(s)	1355, 1389, 1821, 2009, 2130
BstAUI	TGTACA	2 cut(s)	1942, 2025
BstC8I	GCNNGC	5 cut(s)	70, 278, 1099, 1272, 1803
BstDEI	CTNAG	7 cut(s)	114, 163, 849, 879, 1643, 2265, 2390
BstDSI	CCRYGG	1 cut(s)	390
BstEII	GGTNACC	1 cut(s)	1970
BstF5I	GGATG	3 cut(s)	1536, 2242, 2315
BstH2I	RGCGCY	1 cut(s)	777
BstHHI	GCGC	2 cut(s)	776, 962
BstKTI	GATC	9 cut(s)	609, 709, 757, 855, 1190, 1453, 1747, 2164, 2299
BstMAI	GTCTC	2 cut(s)	41, 681
BstMBI	GATC	9 cut(s)	606, 706, 754, 852, 1187, 1450, 1744, 2161, 2296
BstMWI	GCNNNNNNNGC	8 cut(s)	69, 251, 639, 792, 957, 968, 2251, 2437
BstNI	CCWGG	2 cut(s)	1169, 2082
BstNSI	RCATGY	3 cut(s)	280, 984, 1628
BstPI	GGTNACC	1 cut(s)	1970
BstSCI	CCNGG	6 cut(s)	97, 484, 786, 1167, 2080, 2093
BstSFI	CTRYAG	1 cut(s)	2122
BstSLI	GKGCMC	1 cut(s)	1964
BstV1I	GCAGC	3 cut(s)	882, 2191, 2373
BstV2I	GAAGAC	1 cut(s)	1222
BstX2I	RGATCY	3 cut(s)	606, 754, 852
BstYI	RGATCY	3 cut(s)	606, 754, 852
BsuRI	GGCC	8 cut(s)	87, 192, 786, 1289, 1491, 1913, 2254, 2440
BtgI	CCRYGG	1 cut(s)	390
BtgZI	GCGATG	1 cut(s)	357
BtsCI	GGATG	3 cut(s)	1536, 2242, 2315
BtsI	GCAGTG	1 cut(s)	1554
BtsIMutI	CAGTG	8 cut(s)	661, 1008, 1043, 1203, 1453, 1554, 1840, 2398
Cac8I	GCNNGC	5 cut(s)	70, 278, 1099, 1272, 1803
CfoI	GCGC	2 cut(s)	776, 962
Cfr13I	GGNCC	3 cut(s)	785, 1006, 2438
CsiI	ACCWGGT	1 cut(s)	1167
Csp6I	GTAC	8 cut(s)	49, 987, 1143, 1345, 1375, 1690, 1943, 2026
CspCI	CAANNNNNGTGG	4 cut(s)	637, 672, 1468, 1503
CviQI	GTAC	8 cut(s)	49, 987, 1143, 1345, 1375, 1690, 1943, 2026
DdeI	CTNAG	7 cut(s)	114, 163, 849, 879, 1643, 2265, 2390
DpnI	GATC	9 cut(s)	608, 708, 756, 854, 1189, 1452, 1746, 2163, 2298
DpnII	GATC	9 cut(s)	606, 706, 754, 852, 1187, 1450, 1744, 2161, 2296
DraIII	CACNNNGTG	1 cut(s)	673
DriI	GACNNNNNGTC	1 cut(s)	1417
EaeI	YGGCCR	3 cut(s)	1287, 1489, 1911
Eam1104I	CTCTTC	5 cut(s)	1355, 1389, 1821, 2009, 2130
Eam1105I	GACNNNNNGTC	1 cut(s)	1417
EarI	CTCTTC	5 cut(s)	1355, 1389, 1821, 2009, 2130
Eco130I	CCWWGG	5 cut(s)	187, 390, 1102, 1492, 2441
Eco147I	AGGCCT	2 cut(s)	192, 2254
Eco32I	GATATC	1 cut(s)	593
Eco47I	GGWCC	1 cut(s)	1006
Eco57I	CTGAAG	1 cut(s)	861
Eco88I	CYCGRG	1 cut(s)	2434
Eco91I	GGTNACC	1 cut(s)	1970
EcoO65I	GGTNACC	1 cut(s)	1970
EcoRI	GAATTC	1 cut(s)	1665
EcoRII	CCWGG	2 cut(s)	1167, 2080
EcoRV	GATATC	1 cut(s)	593
EcoT14I	CCWWGG	5 cut(s)	187, 390, 1102, 1492, 2441
ErhI	CCWWGG	5 cut(s)	187, 390, 1102, 1492, 2441
FalI	AAGNNNNNCTT	6 cut(s)	290, 322, 524, 556, 1086, 1118
FaqI	GGGAC	3 cut(s)	821, 959, 1578
FauI	CCCGC	1 cut(s)	393
FbaI	TGATCA	1 cut(s)	706
FblI	GTMKAC	3 cut(s)	327, 359, 1324
Fnu4HI	GCNGC	4 cut(s)	340, 871, 2205, 2362
FokI	GGATG	3 cut(s)	1523, 2249, 2302
Fsp4HI	GCNGC	4 cut(s)	340, 871, 2205, 2362
FspBI	CTAG	4 cut(s)	69, 1074, 1517, 2373
FspI	TGCGCA	1 cut(s)	961
GlaI	GCGC	2 cut(s)	775, 961
GluI	GCNGC	4 cut(s)	340, 871, 2205, 2362
GsuI	CTGGAG	1 cut(s)	1167
HaeII	RGCGCY	1 cut(s)	777
HaeIII	GGCC	8 cut(s)	87, 192, 786, 1289, 1491, 1913, 2254, 2440
HapII	CCGG	5 cut(s)	88, 99, 485, 788, 2094
HhaI	GCGC	2 cut(s)	776, 962
Hin6I	GCGC	2 cut(s)	774, 960
HinP1I	GCGC	2 cut(s)	774, 960
HindIII	AAGCTT	3 cut(s)	1028, 1095, 2168
HinfI	GANTC	8 cut(s)	180, 404, 559, 863, 1082, 1770, 1924, 2388
HpaII	CCGG	5 cut(s)	88, 99, 485, 788, 2094
HphI	GGTGA	4 cut(s)	793, 927, 1034, 1984
HpyCH4III	ACNGT	5 cut(s)	1142, 1415, 1448, 1844, 2030
HpyF10VI	GCNNNNNNNGC	8 cut(s)	69, 251, 639, 792, 957, 968, 2251, 2437
HpyF3I	CTNAG	7 cut(s)	114, 163, 849, 879, 1643, 2265, 2390
HspAI	GCGC	2 cut(s)	774, 960
Ksp22I	TGATCA	1 cut(s)	706
Kzo9I	GATC	9 cut(s)	606, 706, 754, 852, 1187, 1450, 1744, 2161, 2296
LmnI	GCTCC	2 cut(s)	2083, 2358
Lsp1109I	GCAGC	3 cut(s)	882, 2191, 2373
LweI	GCATC	3 cut(s)	254, 1545, 2232
MabI	ACCWGGT	1 cut(s)	1167
MaeI	CTAG	4 cut(s)	69, 1074, 1517, 2373
MaeIII	GTNAC	4 cut(s)	382, 1600, 1970, 2393
MalI	GATC	9 cut(s)	608, 708, 756, 854, 1189, 1452, 1746, 2163, 2298
MboI	GATC	9 cut(s)	606, 706, 754, 852, 1187, 1450, 1744, 2161, 2296
MflI	RGATCY	3 cut(s)	606, 754, 852
MhlI	GDGCHC	1 cut(s)	1964
MlsI	TGGCCA	3 cut(s)	1289, 1491, 1913
MluNI	TGGCCA	3 cut(s)	1289, 1491, 1913
MlyI	GAGTC	2 cut(s)	872, 2382
MmeI	TCCRAC	4 cut(s)	180, 1207, 1564, 2112
Mox20I	TGGCCA	3 cut(s)	1289, 1491, 1913
MroXI	GAANNNNTTC	5 cut(s)	764, 1229, 1586, 1665, 2153
MscI	TGGCCA	3 cut(s)	1289, 1491, 1913
MseI	TTAA	2 cut(s)	954, 1884
MslI	CAYNNNNRTG	3 cut(s)	240, 1984, 2224
Msp20I	TGGCCA	3 cut(s)	1289, 1491, 1913
MspI	CCGG	5 cut(s)	88, 99, 485, 788, 2094
MspR9I	CCNGG	6 cut(s)	99, 486, 788, 1169, 2082, 2095
Mva1269I	GAATGC	3 cut(s)	441, 766, 1431
MvaI	CCWGG	2 cut(s)	1169, 2082
MwoI	GCNNNNNNNGC	8 cut(s)	69, 251, 639, 792, 957, 968, 2251, 2437
NciI	CCSGG	4 cut(s)	99, 486, 788, 2095
NcoI	CCATGG	1 cut(s)	390
NdeII	GATC	9 cut(s)	606, 706, 754, 852, 1187, 1450, 1744, 2161, 2296
NheI	GCTAGC	1 cut(s)	68
NlaIV	GGNNCC	3 cut(s)	146, 923, 2439
NmuCI	GTSAC	2 cut(s)	1600, 2393
NsbI	TGCGCA	1 cut(s)	961
NspI	RCATGY	3 cut(s)	280, 984, 1628
OliI	CACNNNNGTG	1 cut(s)	240
PaeI	GCATGC	1 cut(s)	280
PceI	AGGCCT	2 cut(s)	192, 2254
PciI	ACATGT	2 cut(s)	980, 1624
PcsI	WCGNNNNNNNCGW	1 cut(s)	1278
PctI	GAATGC	3 cut(s)	441, 766, 1431
PdmI	GAANNNNTTC	5 cut(s)	764, 1229, 1586, 1665, 2153
PfeI	GAWTC	6 cut(s)	180, 404, 559, 1082, 1770, 1924
PfoI	TCCNGGA	1 cut(s)	2093
PkrI	GCNGC	4 cut(s)	341, 872, 2206, 2363
PleI	GAGTC	2 cut(s)	871, 2382
PpsI	GAGTC	2 cut(s)	871, 2382
PscI	ACATGT	2 cut(s)	980, 1624
Psp6I	CCWGG	2 cut(s)	1167, 2080
PspEI	GGTNACC	1 cut(s)	1970
PspGI	CCWGG	2 cut(s)	1167, 2080
PspN4I	GGNNCC	3 cut(s)	146, 923, 2439
PspPI	GGNCC	3 cut(s)	785, 1006, 2438
PsuI	RGATCY	3 cut(s)	606, 754, 852
RsaI	GTAC	8 cut(s)	50, 988, 1144, 1346, 1376, 1691, 1944, 2027
RsaNI	GTAC	8 cut(s)	49, 987, 1143, 1345, 1375, 1690, 1943, 2026
RseI	CAYNNNNRTG	3 cut(s)	240, 1984, 2224
SaqAI	TTAA	2 cut(s)	954, 1884
SatI	GCNGC	4 cut(s)	340, 871, 2205, 2362
Sau3AI	GATC	9 cut(s)	606, 706, 754, 852, 1187, 1450, 1744, 2161, 2296
Sau96I	GGNCC	3 cut(s)	785, 1006, 2438
ScaI	AGTACT	2 cut(s)	1144, 1376
SchI	GAGTC	2 cut(s)	872, 2382
ScrFI	CCNGG	6 cut(s)	99, 486, 788, 1169, 2082, 2095
SduI	GDGCHC	1 cut(s)	1964
SexAI	ACCWGGT	1 cut(s)	1167
SfaNI	GCATC	3 cut(s)	254, 1545, 2232
SfcI	CTRYAG	1 cut(s)	2122
SinI	GGWCC	1 cut(s)	1006
SmiMI	CAYNNNNRTG	3 cut(s)	240, 1984, 2224
SmlI	CTYRAG	5 cut(s)	515, 554, 966, 1380, 2048
SmoI	CTYRAG	5 cut(s)	515, 554, 966, 1380, 2048
SphI	GCATGC	1 cut(s)	280
SseBI	AGGCCT	2 cut(s)	192, 2254
SsiI	CCGC	3 cut(s)	254, 339, 400
SspMI	CTAG	4 cut(s)	69, 1074, 1517, 2373
StuI	AGGCCT	2 cut(s)	192, 2254
StyD4I	CCNGG	6 cut(s)	97, 484, 786, 1167, 2080, 2093
StyI	CCWWGG	5 cut(s)	187, 390, 1102, 1492, 2441
TaaI	ACNGT	5 cut(s)	1142, 1415, 1448, 1844, 2030
TaqI	TCGA	2 cut(s)	1233, 1621
TatI	WGTACW	6 cut(s)	48, 1142, 1374, 1689, 1942, 2025
TauI	GCSGC	1 cut(s)	342
TfiI	GAWTC	6 cut(s)	180, 404, 559, 1082, 1770, 1924
Tru1I	TTAA	2 cut(s)	954, 1884
Tru9I	TTAA	2 cut(s)	954, 1884
TscAI	CASTG	8 cut(s)	661, 1008, 1050, 1210, 1453, 1554, 1847, 2398
TseFI	GTSAC	2 cut(s)	1600, 2393
TseI	GCWGC	3 cut(s)	870, 2204, 2361
Tsp45I	GTSAC	2 cut(s)	1600, 2393
TspRI	CASTG	8 cut(s)	661, 1008, 1050, 1210, 1453, 1554, 1847, 2398
VpaK11BI	GGWCC	1 cut(s)	1006
XapI	RAATTY	3 cut(s)	1471, 1617, 1665
XceI	RCATGY	3 cut(s)	280, 984, 1628
XcmI	CCANNNNNNNNNTGG	4 cut(s)	609, 1000, 1190, 1499
XmiI	GTMKAC	3 cut(s)	327, 359, 1324
XmnI	GAANNNNTTC	5 cut(s)	764, 1229, 1586, 1665, 2153
XspI	CTAG	4 cut(s)	69, 1074, 1517, 2373
ZrmI	AGTACT	2 cut(s)	1144, 1376

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.