RLG00000020851

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0012448
Physical Location & Seq
Reverse (-)
69447190 .. 69448905
1716 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000020851

Sequence Viewer

Length: 1716 bp
ATGCTGGGTCGGTCCACATTTTCCAGAACCGGAAACTTCCGGCCTGAGAATCTGGGCCCCAATGCGGTTGCTTTGATCGGAAACCTGTGCTTCACGTTTTTCGTGTTCGGGGTACTAATCTTCACCATTATTGCCGCCACTTATGAACCTGAAGACCCTTTGTTTCACCCATCAACCAAGATCAGCAGTTTCCTCACATCCAAATCTAATGCCACTTTCAAATCCGATGACACTGAGGCCAAGACCGGCGAGAATTTCCTGGCTCCCAATCAAACCGAGTTTGAGAGCTTCATCAATGCAACTGATGTTGCTGACTTGAAGTCGGCTGTGACCGTGGCGGTGGAAGAGGCTAGAGAGGCTGAAGTGGTGCCCGGCTCCGATTGTGAGGGTCCCATTGATTGCAGGGACACCGAGGTGTTCCATTTGATGATGACAGCTGCTATAGAAAAGTTTAAGGATATACATTTTTACAAATTTGGGAAAGCAGTTCGGGGTGAGAATGATACCACTTGTGATATGGCTTGGAGGTATAGGCCTAAGGAAGGGAAGACTGCTTCATTGTACAAGGACTATAGGAGGTTTAGTATTTTGAGGTCAAATTGTAGTCTGAGTGTGGCTGAGATTGGAGAATACCATACAGGAGTAAATGCTAGGAAGAAGAAGAGGAATCAGAGACACGGGGTTCAGAAGACGGGTGGGAAGCAAGAAGAGGGGAAGATATTCCCAGTTTATGGGGAACAGGTGAATGATAATCTTCCGGTGGTGGAATCTGAGGGTTCATTTAGCCGTGGTAAGTACTTGATTTATGTGGGTGGTGGAGACAGGTGCAAGAGCATGAACCAATACTTGTGGAGTTTTTTGTGTGCTTTAGGTGAAGCTCAATACCTGAACCGGACTTTGGTTATGGATTTGAGTATTTGTCTCTCGTCCATTTACACTAAATCGAATCAAGATGAGGAAGGGAAAGATTTCAGGTTTTACTTTGATTTCGAGCATTTAAGTGAGTCAGCATCTGTATTGGACCAGGTTCAGTTTTGGGCTGACTGGGATAAATGGCAGAAGAAAGATGGGCTGAGTCTTCATCTTGTGGAAAATTTTCAGGTCACACCTATGAAACTTCAATACGTGAAGGATTCTTTGATTATGAGAAAGTTTGCCTCTGTGGAACCAGACAATTATTGGTATAGGGTGTGTGAAGGGGAGACAGAATCTGTCATTCAACGACCATGGCATTTGATATGGAAATCGAAAAGGTTGATGGATATAGTGTCTGCAATTGCATCTAGACTGAACTGGGATTATGACTCTGTGCATATTGAGAGAGGAGAGAAGGCACAGAACAAGGAGCTTTGGCCTAACCTTGCTCAGGATACTTCACCTGATTCACTTCTCGCGACCCTGAAGGACAAAGTTGAAGATGGGAGGAACCTCTACATTGCAACAAATGAACCAGAAACATCTTTCTTTGATCCTTTGAAAGACAAGTATACCACTCATTTCCTTGATGAATACAAGGATCTTTGGGATGAAAAAAGCGAGTGGTATTCTGAGACCGCCAAGCTTACCAGTGGAGTTCCAGTTGACTTTGATGGTTACATGAGGGTGTCAGTTGATACAGAAGTGTTCTTGAGAGGGAAAAAGCAGATTGAAACTTTCAATGATCTCACCAATGATTGCAAGGATGGTGTCAACACTTGTAACACCGCGGCTAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
O-FucT

Protein Analysis

572

Amino Acids

65.25

Weight (kDa)

5.21

Isoelectric Point (pI)

29.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF7074 PF23269 130 - 213 3.2e-35 Domain of unknown function (DUF7074)
DUF7075 PF23272 260 - 551 2.7e-85 Domain of unknown function (DUF7075)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0012448)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G04280 AT4G12700
fragaria_vesca FvH4_6g40420
malus_domestica MD09G1130100.v1.1 MD17G1105300.v1.1
prunus_persica Prupe.3G195000_v2.0.a1 Prupe.3G195000_v2.0.a1
pyrus_communis pycom09g05320
rosa_chinensis RchiOBHm_Chr2g0155651
rosa_laevigata RLG00000020851
rosa_multiflora Rmu_ssc0000430.1_g000005
rosa_roxburghii Rroxscaffold_1G00014560 Rroxscaffold_2G00093590
rosa_rugosa Rorug02G0448800
rosa_samantha Rh2AG514900 Rh2BG525800 Rh2CG499800 Rh2DG534700
rosa_wichuraiana Rw2G042310

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 367
AccB7I CCANNNNNTGG 1 cut(s) 731
AccI GTMKAC 1 cut(s) 1487
AccII CGCG 2 cut(s) 1394, 1706
AciI CCGC 6 cut(s) 65, 135, 338, 1554, 1704, 1706
AclWI GGATC 2 cut(s) 1463, 1524
AcsI RAATTY 3 cut(s) 253, 473, 1093
AcuI CTGAAG 3 cut(s) 171, 381, 1421
AfaI GTAC 3 cut(s) 114, 563, 797
AfiI CCNNNNNNNGG 5 cut(s) 64, 542, 731, 898, 1366
AgsI TTSAA 8 cut(s) 220, 319, 1121, 1220, 1415, 1477, 1649, 1657
AhdI GACNNNNNGTC 1 cut(s) 319
AjnI CCWGG 2 cut(s) 258, 1023
AjuI GAANNNNNNNTTGG 2 cut(s) 881, 913
AleI CACNNNNGTG 1 cut(s) 413
AluBI AGCT 6 cut(s) 288, 437, 878, 1348, 1561, 1713
AluI AGCT 6 cut(s) 288, 437, 878, 1348, 1561, 1713
Alw26I GTCTC 5 cut(s) 667, 813, 926, 1196, 1544
AlwI GGATC 2 cut(s) 1463, 1524
AlwNI CAGNNNCTG 2 cut(s) 1013, 1211
AoxI GGCC 5 cut(s) 41, 55, 237, 533, 1352
ApaI GGGCCC 1 cut(s) 59
ApeKI GCWGC 1 cut(s) 437
ApoI RAATTY 3 cut(s) 253, 473, 1093
Asp700I GAANNNNTTC 3 cut(s) 719, 968, 1095
AspS9I GGNCC 5 cut(s) 12, 55, 56, 389, 1021
AsuC2I CCSGG 1 cut(s) 372
AsuHPI GGTGA 7 cut(s) 115, 158, 506, 754, 884, 1368, 1657
AsuNHI GCTAGC 1 cut(s) 1709
AvaII GGWCC 3 cut(s) 12, 389, 1021
AxyI CCTNAGG 1 cut(s) 537
BaeGI GKGCMC 2 cut(s) 59, 372
BaeI ACNNNNGTAYC 2 cut(s) 1605, 1638
BanI GGYRCC 1 cut(s) 367
BanII GRGCYC 1 cut(s) 59
BbsI GAAGAC 4 cut(s) 159, 554, 695, 1070
BbvI GCAGC 1 cut(s) 424
BccI CCATC 6 cut(s) 178, 1061, 1252, 1412, 1583, 1676
BceAI ACGGC 1 cut(s) 771
BciT130I CCWGG 2 cut(s) 260, 1025
BciVI GTATCC 1 cut(s) 1363
BcnI CCSGG 1 cut(s) 372
BcoDI GTCTC 5 cut(s) 667, 813, 926, 1196, 1544
BfaI CTAG 4 cut(s) 351, 651, 1284, 1710
BfmI CTRYAG 2 cut(s) 441, 571
BfuI GTATCC 1 cut(s) 1363
BisI GCNGC 3 cut(s) 135, 438, 1707
BlsI GCNGC 3 cut(s) 136, 439, 1708
BmcAI AGTACT 1 cut(s) 797
Bme1390I CCNGG 3 cut(s) 260, 372, 1025
Bme18I GGWCC 3 cut(s) 12, 389, 1021
BmeRI GACNNNNNGTC 1 cut(s) 319
BmgT120I GGNCC 5 cut(s) 12, 55, 56, 389, 1021
BmiI GGNNCC 9 cut(s) 57, 58, 264, 369, 376, 390, 391, 1167, 1427
BmrFI CCNGG 3 cut(s) 260, 372, 1025
BmrI ACTGGG 3 cut(s) 719, 1054, 1303
BmsI GCATC 2 cut(s) 1019, 1289
BmtI GCTAGC 1 cut(s) 1713
BmuI ACTGGG 3 cut(s) 719, 1054, 1303
BpiI GAAGAC 4 cut(s) 159, 554, 695, 1070
Bpu10I CCTNAGC 1 cut(s) 1365
BpuEI CTTGAG 1 cut(s) 1648
BpuMI CCSGG 1 cut(s) 372
BsaAI YACGTR 1 cut(s) 1126
BsaI GGTCTC 1 cut(s) 1544
BsaJI CCNNGG 5 cut(s) 333, 411, 787, 1226, 1704
BsaWI WCCGGW 3 cut(s) 29, 757, 891
BsaXI ACNNNNNCTCC 4 cut(s) 568, 598, 1563, 1593
Bsc4I CCNNNNNNNGG 5 cut(s) 64, 542, 731, 898, 1366
Bse118I RCCGGY 1 cut(s) 245
Bse1I ACTGG 5 cut(s) 725, 1049, 1298, 1566, 1577
Bse21I CCTNAGG 1 cut(s) 537
Bse3DI GCAATG 1 cut(s) 1434
BseBI CCWGG 2 cut(s) 260, 1025
BseDI CCNNGG 5 cut(s) 333, 411, 787, 1226, 1704
BseGI GGATG 3 cut(s) 197, 1531, 1687
BseLI CCNNNNNNNGG 5 cut(s) 64, 542, 731, 898, 1366
BseMI GCAATG 1 cut(s) 1434
BseMII CTCAG 8 cut(s) 36, 225, 599, 609, 762, 1064, 1379, 1539
BseNI ACTGG 5 cut(s) 725, 1049, 1298, 1566, 1577
BseRI GAGGAG 1 cut(s) 1338
BseSI GKGCMC 2 cut(s) 59, 372
BseXI GCAGC 1 cut(s) 424
BseYI CCCAGC 1 cut(s) 4
Bsh1236I CGCG 2 cut(s) 1394, 1706
BshFI GGCC 5 cut(s) 43, 57, 239, 535, 1354
BshNI GGYRCC 1 cut(s) 367
BsiSI CCGG 6 cut(s) 30, 40, 246, 372, 758, 892
BslFI GGGAC 2 cut(s) 375, 419
BslI CCNNNNNNNGG 5 cut(s) 64, 542, 731, 898, 1366
BsmAI GTCTC 5 cut(s) 667, 813, 926, 1196, 1544
BsmFI GGGAC 2 cut(s) 375, 419
BsnI GGCC 5 cut(s) 43, 57, 239, 535, 1354
Bso31I GGTCTC 1 cut(s) 1544
Bsp120I GGGCCC 1 cut(s) 55
Bsp1286I GDGCHC 2 cut(s) 59, 372
Bsp1407I TGTACA 1 cut(s) 561
Bsp143I GATC 5 cut(s) 75, 180, 1468, 1516, 1660
Bsp19I CCATGG 1 cut(s) 1226
Bsp68I TCGCGA 1 cut(s) 1394
BspACI CCGC 6 cut(s) 65, 135, 338, 1554, 1704, 1706
BspANI GGCC 5 cut(s) 43, 57, 239, 535, 1354
BspCNI CTCAG 8 cut(s) 37, 226, 600, 610, 763, 1065, 1378, 1540
BspFNI CGCG 2 cut(s) 1394, 1706
BspLI GGNNCC 9 cut(s) 57, 58, 264, 369, 376, 390, 391, 1167, 1427
BspOI GCTAGC 1 cut(s) 1713
BspPI GGATC 2 cut(s) 1463, 1524
BspT107I GGYRCC 1 cut(s) 367
BspTNI GGTCTC 1 cut(s) 1544
BsrDI GCAATG 1 cut(s) 1434
BsrFI RCCGGY 1 cut(s) 245
BsrGI TGTACA 1 cut(s) 561
BsrI ACTGG 5 cut(s) 725, 1049, 1298, 1566, 1577
BssAI RCCGGY 1 cut(s) 245
BssECI CCNNGG 5 cut(s) 333, 411, 787, 1226, 1704
BssMI GATC 5 cut(s) 75, 180, 1468, 1516, 1660
BssNAI GTATAC 1 cut(s) 1488
BssT1I CCWWGG 1 cut(s) 1226
Bst1107I GTATAC 1 cut(s) 1488
Bst2UI CCWGG 2 cut(s) 260, 1025
Bst4CI ACNGT 1 cut(s) 334
Bst6I CTCTTC 3 cut(s) 339, 656, 702
BstAUI TGTACA 1 cut(s) 561
BstBAI YACGTR 1 cut(s) 1126
BstC8I GCNNGC 1 cut(s) 1711
BstDEI CTNAG 9 cut(s) 45, 234, 537, 608, 618, 771, 1073, 1365, 1548
BstDSI CCRYGG 4 cut(s) 333, 787, 1226, 1704
BstENI CCTNNNNNAGG 2 cut(s) 540, 1364
BstF5I GGATG 3 cut(s) 197, 1531, 1687
BstFNI CGCG 2 cut(s) 1394, 1706
BstKTI GATC 5 cut(s) 78, 183, 1471, 1519, 1663
BstMAI GTCTC 5 cut(s) 667, 813, 926, 1196, 1544
BstMBI GATC 5 cut(s) 75, 180, 1468, 1516, 1660
BstMWI GCNNNNNNNGC 1 cut(s) 356
BstNI CCWGG 2 cut(s) 260, 1025
BstSCI CCNGG 3 cut(s) 258, 370, 1023
BstSFI CTRYAG 2 cut(s) 441, 571
BstSLI GKGCMC 2 cut(s) 59, 372
BstUI CGCG 2 cut(s) 1394, 1706
BstV1I GCAGC 1 cut(s) 424
BstV2I GAAGAC 4 cut(s) 159, 554, 695, 1070
BstX2I RGATCY 1 cut(s) 1516
BstYI RGATCY 1 cut(s) 1516
BstZ17I GTATAC 1 cut(s) 1488
Bsu36I CCTNAGG 1 cut(s) 537
BsuI GTATCC 1 cut(s) 1363
BsuRI GGCC 5 cut(s) 43, 57, 239, 535, 1354
BtgI CCRYGG 4 cut(s) 333, 787, 1226, 1704
BtsCI GGATG 3 cut(s) 197, 1531, 1687
BtsIMutI CAGTG 2 cut(s) 231, 1573
BtuMI TCGCGA 1 cut(s) 1394
Cac8I GCNNGC 1 cut(s) 1711
CaiI CAGNNNCTG 2 cut(s) 1013, 1211
Cfr10I RCCGGY 1 cut(s) 245
Cfr13I GGNCC 5 cut(s) 12, 55, 56, 389, 1021
Cfr42I CCGCGG 1 cut(s) 1707
CsiI ACCWGGT 1 cut(s) 1023
Csp6I GTAC 3 cut(s) 113, 562, 796
CspCI CAANNNNNGTGG 2 cut(s) 830, 865
CviAII CATG 3 cut(s) 835, 1227, 1597
CviQI GTAC 3 cut(s) 113, 562, 796
DdeI CTNAG 9 cut(s) 45, 234, 537, 608, 618, 771, 1073, 1365, 1548
DpnI GATC 5 cut(s) 77, 182, 1470, 1518, 1662
DpnII GATC 5 cut(s) 75, 180, 1468, 1516, 1660
DriI GACNNNNNGTC 1 cut(s) 319
Eam1104I CTCTTC 3 cut(s) 339, 656, 702
Eam1105I GACNNNNNGTC 1 cut(s) 319
EarI CTCTTC 3 cut(s) 339, 656, 702
Eco130I CCWWGG 1 cut(s) 1226
Eco147I AGGCCT 1 cut(s) 535
Eco24I GRGCYC 1 cut(s) 59
Eco31I GGTCTC 1 cut(s) 1544
Eco47I GGWCC 3 cut(s) 12, 389, 1021
Eco57I CTGAAG 3 cut(s) 171, 381, 1421
Eco81I CCTNAGG 1 cut(s) 537
EcoNI CCTNNNNNAGG 2 cut(s) 540, 1364
EcoO109I RGGNCCY 2 cut(s) 56, 389
EcoRII CCWGG 2 cut(s) 258, 1023
EcoT14I CCWWGG 1 cut(s) 1226
EcoT38I GRGCYC 1 cut(s) 59
ErhI CCWWGG 1 cut(s) 1226
FaeI CATG 3 cut(s) 838, 1230, 1600
FaqI GGGAC 2 cut(s) 375, 419
FatI CATG 3 cut(s) 834, 1226, 1596
FblI GTMKAC 1 cut(s) 1487
Fnu4HI GCNGC 3 cut(s) 135, 438, 1707
FokI GGATG 3 cut(s) 184, 1538, 1694
FriOI GRGCYC 1 cut(s) 59
Fsp4HI GCNGC 3 cut(s) 135, 438, 1707
FspBI CTAG 4 cut(s) 351, 651, 1284, 1710
GluI GCNGC 3 cut(s) 135, 438, 1707
GsaI CCCAGC 1 cut(s) 8
HaeIII GGCC 5 cut(s) 43, 57, 239, 535, 1354
HapII CCGG 6 cut(s) 30, 40, 246, 372, 758, 892
Hin1II CATG 3 cut(s) 838, 1230, 1600
HincII GTYRAC 2 cut(s) 1582, 1690
HindII GTYRAC 2 cut(s) 1582, 1690
HindIII AAGCTT 1 cut(s) 1559
HpaII CCGG 6 cut(s) 30, 40, 246, 372, 758, 892
HphI GGTGA 7 cut(s) 115, 158, 506, 754, 884, 1368, 1657
Hpy166II GTNNAC 4 cut(s) 15, 1488, 1582, 1690
Hpy188I TCNGA 8 cut(s) 80, 226, 379, 609, 672, 687, 772, 1549
Hpy188III TCNNGA 6 cut(s) 24, 950, 1284, 1367, 1393, 1627
Hpy8I GTNNAC 4 cut(s) 15, 1488, 1582, 1690
HpyAV CCTTC 6 cut(s) 536, 953, 1123, 1190, 1324, 1396
HpyCH4III ACNGT 1 cut(s) 334
HpyCH4IV ACGT 2 cut(s) 95, 1125
HpyCH4V TGCA 8 cut(s) 299, 402, 828, 1274, 1280, 1312, 1439, 1677
HpyF10VI GCNNNNNNNGC 1 cut(s) 356
HpyF3I CTNAG 9 cut(s) 45, 234, 537, 608, 618, 771, 1073, 1365, 1548
HpySE526I ACGT 2 cut(s) 95, 1125
Hsp92II CATG 3 cut(s) 838, 1230, 1600
KflI GGGWCCC 1 cut(s) 389
KspI CCGCGG 1 cut(s) 1707
Kzo9I GATC 5 cut(s) 75, 180, 1468, 1516, 1660
LmnI GCTCC 3 cut(s) 268, 380, 1345
Lsp1109I GCAGC 1 cut(s) 424
LweI GCATC 2 cut(s) 1019, 1289
MabI ACCWGGT 1 cut(s) 1023
MaeI CTAG 4 cut(s) 351, 651, 1284, 1710
MaeII ACGT 2 cut(s) 95, 1125
MaeIII GTNAC 4 cut(s) 328, 1102, 1592, 1697
MalI GATC 5 cut(s) 77, 182, 1470, 1518, 1662
MboI GATC 5 cut(s) 75, 180, 1468, 1516, 1660
MfeI CAATTG 1 cut(s) 1275
MflI RGATCY 1 cut(s) 1516
MhlI GDGCHC 2 cut(s) 59, 372
MluCI AATT 6 cut(s) 253, 473, 598, 1093, 1174, 1275
MlyI GAGTC 3 cut(s) 1013, 1084, 1298
MroXI GAANNNNTTC 3 cut(s) 719, 968, 1095
MseI TTAA 2 cut(s) 453, 998
MslI CAYNNNNRTG 4 cut(s) 413, 999, 1109, 1601
MspA1I CMGCKG 2 cut(s) 437, 1706
MspI CCGG 6 cut(s) 30, 40, 246, 372, 758, 892
MspR9I CCNGG 3 cut(s) 260, 372, 1025
MunI CAATTG 1 cut(s) 1275
MvaI CCWGG 2 cut(s) 260, 1025
MvnI CGCG 2 cut(s) 1394, 1706
MwoI GCNNNNNNNGC 1 cut(s) 356
NciI CCSGG 1 cut(s) 372
NcoI CCATGG 1 cut(s) 1226
NdeII GATC 5 cut(s) 75, 180, 1468, 1516, 1660
NheI GCTAGC 1 cut(s) 1709
NlaIII CATG 3 cut(s) 838, 1230, 1600
NlaIV GGNNCC 9 cut(s) 57, 58, 264, 369, 376, 390, 391, 1167, 1427
NmuCI GTSAC 2 cut(s) 328, 1102
NruI TCGCGA 1 cut(s) 1394
OliI CACNNNNGTG 1 cut(s) 413
PceI AGGCCT 1 cut(s) 535
PdmI GAANNNNTTC 3 cut(s) 719, 968, 1095
PfeI GAWTC 7 cut(s) 49, 667, 767, 946, 1133, 1208, 1382
PflMI CCANNNNNTGG 1 cut(s) 731
PkrI GCNGC 3 cut(s) 136, 439, 1708
PleI GAGTC 3 cut(s) 1012, 1083, 1298
PpsI GAGTC 3 cut(s) 1012, 1083, 1298
Ppu21I YACGTR 1 cut(s) 1126
PpuMI RGGWCCY 1 cut(s) 389
Psp5II RGGWCCY 1 cut(s) 389
Psp6I CCWGG 2 cut(s) 258, 1023
PspFI CCCAGC 1 cut(s) 4
PspGI CCWGG 2 cut(s) 258, 1023
PspN4I GGNNCC 9 cut(s) 57, 58, 264, 369, 376, 390, 391, 1167, 1427
PspOMI GGGCCC 1 cut(s) 55
PspPI GGNCC 5 cut(s) 12, 55, 56, 389, 1021
PspPPI RGGWCCY 1 cut(s) 389
PstNI CAGNNNCTG 2 cut(s) 1013, 1211
PsuI RGATCY 1 cut(s) 1516
PvuII CAGCTG 1 cut(s) 437
RruI TCGCGA 1 cut(s) 1394
RsaI GTAC 3 cut(s) 114, 563, 797
RsaNI GTAC 3 cut(s) 113, 562, 796
RseI CAYNNNNRTG 4 cut(s) 413, 999, 1109, 1601
SacII CCGCGG 1 cut(s) 1707
SaqAI TTAA 2 cut(s) 453, 998
SatI GCNGC 3 cut(s) 135, 438, 1707
Sau3AI GATC 5 cut(s) 75, 180, 1468, 1516, 1660
Sau96I GGNCC 5 cut(s) 12, 55, 56, 389, 1021
ScaI AGTACT 1 cut(s) 797
SchI GAGTC 3 cut(s) 1013, 1084, 1298
ScrFI CCNGG 3 cut(s) 260, 372, 1025
SduI GDGCHC 2 cut(s) 59, 372
SexAI ACCWGGT 1 cut(s) 1023
SfaNI GCATC 2 cut(s) 1019, 1289
SfcI CTRYAG 2 cut(s) 441, 571
Sfr303I CCGCGG 1 cut(s) 1707
SgrBI CCGCGG 1 cut(s) 1707
SinI GGWCC 3 cut(s) 12, 389, 1021
SmiMI CAYNNNNRTG 4 cut(s) 413, 999, 1109, 1601
SmlI CTYRAG 1 cut(s) 1627
SmoI CTYRAG 1 cut(s) 1627
Sse9I AATT 6 cut(s) 253, 473, 598, 1093, 1174, 1275
SseBI AGGCCT 1 cut(s) 535
SsiI CCGC 6 cut(s) 65, 135, 338, 1554, 1704, 1706
SspMI CTAG 4 cut(s) 351, 651, 1284, 1710
StuI AGGCCT 1 cut(s) 535
StyD4I CCNGG 3 cut(s) 258, 370, 1023
StyI CCWWGG 1 cut(s) 1226
TaaI ACNGT 1 cut(s) 334
TaiI ACGT 2 cut(s) 98, 1128
TaqI TCGA 3 cut(s) 944, 990, 1247
TasI AATT 6 cut(s) 253, 473, 598, 1093, 1174, 1275
TatI WGTACW 2 cut(s) 561, 795
TauI GCSGC 2 cut(s) 137, 1709
TfiI GAWTC 7 cut(s) 49, 667, 767, 946, 1133, 1208, 1382
Tru1I TTAA 2 cut(s) 453, 998
Tru9I TTAA 2 cut(s) 453, 998
TscAI CASTG 2 cut(s) 238, 1573
TseFI GTSAC 2 cut(s) 328, 1102
TseI GCWGC 1 cut(s) 437
Tsp45I GTSAC 2 cut(s) 328, 1102
TspRI CASTG 2 cut(s) 238, 1573
Van91I CCANNNNNTGG 1 cut(s) 731
VpaK11BI GGWCC 3 cut(s) 12, 389, 1021
XagI CCTNNNNNAGG 2 cut(s) 540, 1364
XapI RAATTY 3 cut(s) 253, 473, 1093
XbaI TCTAGA 1 cut(s) 1283
XcmI CCANNNNNNNNNTGG 2 cut(s) 514, 1176
XmiI GTMKAC 1 cut(s) 1487
XmnI GAANNNNTTC 3 cut(s) 719, 968, 1095
XspI CTAG 4 cut(s) 351, 651, 1284, 1710
ZrmI AGTACT 1 cut(s) 797
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.