Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0005140

Physical Location & Seq

Genomic Coordinates Reverse (-)

71030355 .. 71035662

Gene Structure 5308 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000021009

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1560 bp

ATGACGAACAATATTACTGGAAAAATATGGAATGTGGATGGTGGGAATATTGTTGGATGCTCAAGGTTGATGAGAAGATACACATCAGCCTCAAGCAGACGTGTATTAGACATGGCTGCTAAAGATGGGGAGCTGAGGGTCTTCATAGTTTCTGGAGAGGTTTCTGGCGACACCATTGGCTCTCGTCTGATGGCATCTCTAAAGAAGCTCTCTCCTGTTCCAGTCCGCTTTTCTGGTGTTGGAGGGACTATGATGTCCAATCAAGGATTAAAGTCTGTATTTCCTATGGAGGATATTGCAGTGATGGGATTGTTGGAGTTATTGCCTCATCTAAATAAACTCAGACTGAAGTTGCAGGAGACATTAGAAGCTGCTCTTTTGTTTCAACCTCATGTTGTTGTAACAGTGGATTCCAAGGGATTCTCTTTCCGTCTTCTAAAGCAGTTACGGGCTAGATACAATCAAAAAAGCTTCGAGATTCCAGTACACTTCCATTATGTAGCACCATCATTCTGGGCTTGGAAAGGGGGCGAAGCAAGACTCAGAGGCTTAGCTGGATTTGTGGATCATATTCTGTGTATACTTCCGAATGAAGAAGAAGTTTGCAGATCAAATGGATTGGTTGCAACCTTTGTTGGCCACCCTATTCTAGAGGATGTGTGGGAGTTGAATTTGGATACTTTACCACATGAGTGGAAAATAGAAGGAAACTCAGAAATTTTCAGAAGAAATCATGCAATACCTGCAGGAGCCCCAATCATTTCCTTGCTTCCTGGAAGCAGATTACAGGAGGTCACCAGAATGCTTCCTCTCTTTGCAAATACCATTGAACTATTAAAAGTCTCCTTTCCTGAGTTGGTACCAGTGATCCATGTCGCTACAAATCAGCATGTGAAGGACTATGTCACTAGATTTACCAACAAGTGGCCTGTGCCTGCTATATTGATTCCAGGAGGATCTCTGCACCAGAAATATGATGCATTCAGCGCAAGTAGTGTTGCATTATGTGCTTCTGGAACAGTTGCTTTGGAGTTGCAGCTTGCACGGCTACCGTGCGTAGTTGCTTATCGAGCTCATTTCCTAACTGAGTGGATTATTCGCTATAAAGCCAAGATATCTTACATCTCCCTCCCAAATATCTTGTTGGATTCAGCTATCGTACCTGAAGCACTGTTTCGAGCATGCACTCCAGCAAAGCTAGCCTCATTAACATCGAAATTGATACATGACGATGGCCTCCGAGAAAAACAAATTGTTGCTGCTGAAAAGGTTACCCGACTTCTATGTGCTTCACCTGGAAACGTAGATAAGTTGGAAGAGCCGCATCAAAGATGGAGCCTGTGCTGTATCAAAGTCACCGAGGCTCACACCGAAGGCTGTGACCATAATGAGCCAAACAAAGGTGACCAATGCCGTGAAGATGCCAGTGATGAATTTGCGGACCACGATGTCGATGACACATACAAGATTGTGAACAAGGTTGCAGTGACTTTCACGCAAAGAAATGAAGAACCTGGACAAATTGATGAGGAAAATCATGTGGTCGTACTGGGACACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0005975 GO:0006040 GO:0006629 GO:0006643 GO:0006644 GO:0006664 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008194 GO:0008289 GO:0008610 GO:0008654 GO:0008915 GO:0009058 GO:0009245 GO:0009247 GO:0009311 GO:0009312 GO:0009987 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019637 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046467 GO:0046493 GO:0071704 GO:0090407 GO:1901135 GO:1901137 GO:1901269 GO:1901271 GO:1901576 GO:1903509 GO:2001289

KEGG Pathways

Metabolic & Signaling

ko00540 ko01100 map00540 map01100

Pfam Domains

Protein Families

LpxB

Protein Analysis

520

Amino Acids

57.72

Weight (kDa)

6.68

Isoelectric Point (pI)

42.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LpxB	PF02684	47 - 428	3e-76	Lipid-A-disaccharide synthetase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0005140)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04560
fragaria_vesca	FvH4_6g41870 FvH4_6g41870 FvH4_6g41870 FvH4_6g41870 FvH4_6g41870 FvH4_6g41870
malus_domestica	MD09G1116800.v1.1
prunus_persica	Prupe.3G208000_v2.0.a1 Prupe.3G208000_v2.0.a1 Prupe.3G208000_v2.0.a1 Prupe.3G208000_v2.0.a1 Prupe.3G208000_v2.0.a1
pyrus_communis	pycom09g04140 pycom17g10060
rosa_chinensis	RchiOBHm_Chr2g0157701 RchiOBHm_Chr2g0157711
rosa_laevigata	RLG00000021009
rosa_multiflora	Rmu_sc0001275.1_g000003
rosa_roxburghii	Rroxscaffold_2G00092020
rosa_rugosa	Rorug02G0462900
rosa_samantha	Rh2AG527200 Rh2AG527300 Rh2BG542000 Rh2BG542100 Rh2CG511700 Rh2CG511800 Rh2DG550600 Rh2DG550700
rosa_wichuraiana	Rw2G043660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	253, 1448
Acc36I	ACCTGC	1 cut(s)	751
Acc65I	GGTACC	1 cut(s)	859
AccB1I	GGYRCC	1 cut(s)	859
AccB7I	CCANNNNNTGG	1 cut(s)	924
AccI	GTMKAC	1 cut(s)	580
AciI	CCGC	3 cut(s)	226, 1322, 1439
AclWI	GGATC	3 cut(s)	573, 862, 964
AcoI	YGGCCR	1 cut(s)	637
AcsI	RAATTY	3 cut(s)	670, 717, 1433
AcuI	CTGAAG	2 cut(s)	368, 1185
AfaI	GTAC	4 cut(s)	486, 861, 1161, 1548
AfiI	CCNNNNNNNGG	2 cut(s)	924, 1400
AflIII	ACRYGT	1 cut(s)	100
AgsI	TTSAA	3 cut(s)	386, 670, 830
AjiI	CACGTC	1 cut(s)	101
AjnI	CCWGG	4 cut(s)	772, 949, 1294, 1513
AleI	CACNNNNGTG	1 cut(s)	691
AluBI	AGCT	9 cut(s)	133, 208, 371, 471, 554, 1039, 1073, 1154, 1198
AluI	AGCT	9 cut(s)	133, 208, 371, 471, 554, 1039, 1073, 1154, 1198
Alw21I	GWGCWC	1 cut(s)	1075
Alw26I	GTCTC	2 cut(s)	353, 847
AlwI	GGATC	3 cut(s)	573, 862, 964
AoxI	GGCC	3 cut(s)	637, 926, 1234
ApeKI	GCWGC	4 cut(s)	116, 371, 1036, 1259
ApoI	RAATTY	3 cut(s)	670, 717, 1433
Asp718I	GGTACC	1 cut(s)	859
AspLEI	GCGC	1 cut(s)	989
AspS9I	GGNCC	1 cut(s)	1441
AsuHPI	GGTGA	4 cut(s)	787, 1284, 1348, 1415
AsuNHI	GCTAGC	1 cut(s)	1198
AvaII	GGWCC	1 cut(s)	1441
BalI	TGGCCA	1 cut(s)	639
BanI	GGYRCC	1 cut(s)	859
BanII	GRGCYC	2 cut(s)	754, 1075
BbsI	GAAGAC	2 cut(s)	133, 425
Bbv12I	GWGCWC	1 cut(s)	1075
BbvCI	CCTCAGC	1 cut(s)	134
BbvI	GCAGC	4 cut(s)	103, 358, 1048, 1246
BccI	CCATC	7 cut(s)	32, 119, 184, 298, 514, 1226, 1326
BceAI	ACGGC	2 cut(s)	1061, 1398
BciT130I	CCWGG	4 cut(s)	774, 951, 1296, 1515
BciVI	GTATCC	1 cut(s)	670
BcoDI	GTCTC	2 cut(s)	353, 847
BfaI	CTAG	4 cut(s)	453, 650, 909, 1199
BfmI	CTRYAG	1 cut(s)	744
BfuAI	ACCTGC	1 cut(s)	751
BfuI	GTATCC	1 cut(s)	670
BisI	GCNGC	5 cut(s)	117, 372, 1037, 1260, 1322
BlpI	GCTNAGC	1 cut(s)	550
BlsI	GCNGC	5 cut(s)	118, 373, 1038, 1261, 1323
Bme1390I	CCNGG	4 cut(s)	774, 951, 1296, 1515
Bme18I	GGWCC	1 cut(s)	1441
BmgBI	CACGTC	1 cut(s)	101
BmgT120I	GGNCC	1 cut(s)	1441
BmiI	GGNNCC	3 cut(s)	751, 861, 1337
BmrFI	CCNGG	4 cut(s)	774, 951, 1296, 1515
BmrI	ACTGGG	1 cut(s)	1559
BmsI	GCATC	5 cut(s)	47, 203, 967, 1333, 1411
BmtI	GCTAGC	1 cut(s)	1202
BmuI	ACTGGG	1 cut(s)	1559
BpiI	GAAGAC	2 cut(s)	133, 425
BpmI	CTGGAG	2 cut(s)	174, 1173
Bpu10I	CCTNAGC	1 cut(s)	134
Bpu1102I	GCTNAGC	1 cut(s)	550
BpuEI	CTTGAG	2 cut(s)	46, 76
BsaBI	GATNNNNATC	1 cut(s)	82
BsaJI	CCNNGG	2 cut(s)	414, 1359
Bsc4I	CCNNNNNNNGG	2 cut(s)	924, 1400
Bse1I	ACTGG	6 cut(s)	22, 221, 482, 863, 1425, 1554
Bse8I	GATNNNNATC	1 cut(s)	82
BseBI	CCWGG	4 cut(s)	774, 951, 1296, 1515
BseDI	CCNNGG	2 cut(s)	414, 1359
BseGI	GGATG	3 cut(s)	43, 62, 661
BseJI	GATNNNNATC	1 cut(s)	82
BseLI	CCNNNNNNNGG	2 cut(s)	924, 1400
BseMII	CTCAG	6 cut(s)	125, 355, 556, 726, 843, 1077
BseNI	ACTGG	6 cut(s)	22, 221, 482, 863, 1425, 1554
BseXI	GCAGC	4 cut(s)	103, 358, 1048, 1246
BsgI	GTGCAG	1 cut(s)	947
BshFI	GGCC	3 cut(s)	639, 928, 1236
BshNI	GGYRCC	1 cut(s)	859
BsiHKAI	GWGCWC	1 cut(s)	1075
BslFI	GGGAC	1 cut(s)	259
BslI	CCNNNNNNNGG	2 cut(s)	924, 1400
BsmAI	GTCTC	2 cut(s)	353, 847
BsmFI	GGGAC	1 cut(s)	259
BsmI	GAATGC	2 cut(s)	807, 980
BsnI	GGCC	3 cut(s)	639, 928, 1236
Bsp1286I	GDGCHC	2 cut(s)	754, 1075
Bsp143I	GATC	4 cut(s)	565, 608, 867, 956
Bsp1720I	GCTNAGC	1 cut(s)	550
BspACI	CCGC	3 cut(s)	226, 1322, 1439
BspANI	GGCC	3 cut(s)	639, 928, 1236
BspCNI	CTCAG	6 cut(s)	126, 354, 555, 725, 844, 1078
BspLI	GGNNCC	3 cut(s)	751, 861, 1337
BspMAI	CTGCAG	1 cut(s)	748
BspMI	ACCTGC	1 cut(s)	751
BspOI	GCTAGC	1 cut(s)	1202
BspPI	GGATC	3 cut(s)	573, 862, 964
BspQI	GCTCTTC	1 cut(s)	1311
BspT107I	GGYRCC	1 cut(s)	859
BsrI	ACTGG	6 cut(s)	22, 221, 482, 863, 1425, 1554
BssECI	CCNNGG	2 cut(s)	414, 1359
BssMI	GATC	4 cut(s)	565, 608, 867, 956
BssNAI	GTATAC	1 cut(s)	581
BssT1I	CCWWGG	1 cut(s)	414
Bst1107I	GTATAC	1 cut(s)	581
Bst2UI	CCWGG	4 cut(s)	774, 951, 1296, 1515
Bst4CI	ACNGT	4 cut(s)	406, 1021, 1053, 1173
Bst6I	CTCTTC	1 cut(s)	1311
BstAPI	GCANNNNNTGC	2 cut(s)	743, 1007
BstC8I	GCNNGC	4 cut(s)	936, 1041, 1183, 1200
BstDEI	CTNAG	7 cut(s)	134, 341, 542, 550, 712, 852, 1086
BstEII	GGTNACC	3 cut(s)	793, 1270, 1403
BstF5I	GGATG	3 cut(s)	43, 62, 661
BstHHI	GCGC	1 cut(s)	989
BstKTI	GATC	4 cut(s)	568, 611, 870, 959
BstMAI	GTCTC	2 cut(s)	353, 847
BstMBI	GATC	4 cut(s)	565, 608, 867, 956
BstMWI	GCNNNNNNNGC	6 cut(s)	743, 986, 1007, 1045, 1070, 1199
BstNI	CCWGG	4 cut(s)	774, 951, 1296, 1515
BstNSI	RCATGY	2 cut(s)	893, 1185
BstPI	GGTNACC	3 cut(s)	793, 1270, 1403
BstSCI	CCNGG	4 cut(s)	772, 949, 1294, 1513
BstSFI	CTRYAG	1 cut(s)	744
BstV1I	GCAGC	4 cut(s)	103, 358, 1048, 1246
BstV2I	GAAGAC	2 cut(s)	133, 425
BstX2I	RGATCY	1 cut(s)	956
BstXI	CCANNNNNNTGG	2 cut(s)	513, 693
BstYI	RGATCY	1 cut(s)	956
BstZ17I	GTATAC	1 cut(s)	581
BsuI	GTATCC	1 cut(s)	670
BsuRI	GGCC	3 cut(s)	639, 928, 1236
BtrI	CACGTC	1 cut(s)	101
BtsCI	GGATG	3 cut(s)	43, 62, 661
BtsI	GCAGTG	2 cut(s)	306, 1491
BtsIMutI	CAGTG	7 cut(s)	306, 411, 870, 1169, 1432, 1491, 1555
BveI	ACCTGC	1 cut(s)	751
Cac8I	GCNNGC	4 cut(s)	936, 1041, 1183, 1200
CfoI	GCGC	1 cut(s)	989
Cfr13I	GGNCC	1 cut(s)	1441
Csp6I	GTAC	4 cut(s)	485, 860, 1160, 1547
CviAII	CATG	9 cut(s)	112, 392, 689, 734, 872, 890, 1182, 1226, 1538
CviQI	GTAC	4 cut(s)	485, 860, 1160, 1547
DdeI	CTNAG	7 cut(s)	134, 341, 542, 550, 712, 852, 1086
DpnI	GATC	4 cut(s)	567, 610, 869, 958
DpnII	GATC	4 cut(s)	565, 608, 867, 956
DrdI	GACNNNNNNGTC	2 cut(s)	253, 1448
DseDI	GACNNNNNNGTC	2 cut(s)	253, 1448
EaeI	YGGCCR	1 cut(s)	637
Eam1104I	CTCTTC	1 cut(s)	1311
EarI	CTCTTC	1 cut(s)	1311
Ecl136II	GAGCTC	1 cut(s)	1073
Eco130I	CCWWGG	1 cut(s)	414
Eco24I	GRGCYC	2 cut(s)	754, 1075
Eco32I	GATATC	1 cut(s)	1116
Eco47I	GGWCC	1 cut(s)	1441
Eco53kI	GAGCTC	1 cut(s)	1073
Eco57I	CTGAAG	2 cut(s)	368, 1185
Eco91I	GGTNACC	3 cut(s)	793, 1270, 1403
EcoICRI	GAGCTC	1 cut(s)	1073
EcoO65I	GGTNACC	3 cut(s)	793, 1270, 1403
EcoRII	CCWGG	4 cut(s)	772, 949, 1294, 1513
EcoRV	GATATC	1 cut(s)	1116
EcoT14I	CCWWGG	1 cut(s)	414
EcoT22I	ATGCAT	1 cut(s)	982
EcoT38I	GRGCYC	2 cut(s)	754, 1075
ErhI	CCWWGG	1 cut(s)	414
FaeI	CATG	9 cut(s)	115, 395, 692, 737, 875, 893, 1185, 1229, 1541
FalI	AAGNNNNNCTT	2 cut(s)	360, 392
FaqI	GGGAC	1 cut(s)	259
FatI	CATG	9 cut(s)	111, 391, 688, 733, 871, 889, 1181, 1225, 1537
FblI	GTMKAC	1 cut(s)	580
Fnu4HI	GCNGC	5 cut(s)	117, 372, 1037, 1260, 1322
FokI	GGATG	3 cut(s)	50, 69, 668
FriOI	GRGCYC	2 cut(s)	754, 1075
Fsp4HI	GCNGC	5 cut(s)	117, 372, 1037, 1260, 1322
FspBI	CTAG	4 cut(s)	453, 650, 909, 1199
GlaI	GCGC	1 cut(s)	988
GluI	GCNGC	5 cut(s)	117, 372, 1037, 1260, 1322
GsuI	CTGGAG	2 cut(s)	174, 1173
HaeIII	GGCC	3 cut(s)	639, 928, 1236
HhaI	GCGC	1 cut(s)	989
Hin1II	CATG	9 cut(s)	115, 395, 692, 737, 875, 893, 1185, 1229, 1541
Hin6I	GCGC	1 cut(s)	987
HinP1I	GCGC	1 cut(s)	987
HindIII	AAGCTT	1 cut(s)	469
HinfI	GANTC	6 cut(s)	410, 420, 478, 540, 946, 1148
HphI	GGTGA	4 cut(s)	787, 1284, 1348, 1415
Hpy166II	GTNNAC	3 cut(s)	487, 581, 1474
Hpy188I	TCNGA	7 cut(s)	189, 344, 545, 588, 715, 725, 1241
Hpy188III	TCNNGA	5 cut(s)	153, 475, 650, 851, 1014
Hpy8I	GTNNAC	3 cut(s)	487, 581, 1474
HpyAV	CCTTC	3 cut(s)	698, 889, 1367
HpyCH4III	ACNGT	4 cut(s)	406, 1021, 1053, 1173
HpyCH4IV	ACGT	2 cut(s)	100, 1302
HpyF10VI	GCNNNNNNNGC	6 cut(s)	743, 986, 1007, 1045, 1070, 1199
HpyF3I	CTNAG	7 cut(s)	134, 341, 542, 550, 712, 852, 1086
HpySE526I	ACGT	2 cut(s)	100, 1302
Hsp92II	CATG	9 cut(s)	115, 395, 692, 737, 875, 893, 1185, 1229, 1541
HspAI	GCGC	1 cut(s)	987
KpnI	GGTACC	1 cut(s)	863
Kzo9I	GATC	4 cut(s)	565, 608, 867, 956
LguI	GCTCTTC	1 cut(s)	1311
LmnI	GCTCC	3 cut(s)	130, 749, 1335
Lsp1109I	GCAGC	4 cut(s)	103, 358, 1048, 1246
LweI	GCATC	5 cut(s)	47, 203, 967, 1333, 1411
MaeI	CTAG	4 cut(s)	453, 650, 909, 1199
MaeII	ACGT	2 cut(s)	100, 1302
MaeIII	GTNAC	9 cut(s)	400, 444, 793, 904, 1270, 1354, 1379, 1403, 1486
MalI	GATC	4 cut(s)	567, 610, 869, 958
MboI	GATC	4 cut(s)	565, 608, 867, 956
MboII	GAAGA	9 cut(s)	87, 133, 425, 605, 608, 738, 1328, 1430, 1520
MflI	RGATCY	1 cut(s)	956
MhlI	GDGCHC	2 cut(s)	754, 1075
MlsI	TGGCCA	1 cut(s)	639
MluCI	AATT	6 cut(s)	670, 717, 1217, 1251, 1433, 1521
MluNI	TGGCCA	1 cut(s)	639
MlyI	GAGTC	1 cut(s)	534
MmeI	TCCRAC	5 cut(s)	34, 220, 294, 1125, 1293
Mox20I	TGGCCA	1 cut(s)	639
Mph1103I	ATGCAT	1 cut(s)	982
MscI	TGGCCA	1 cut(s)	639
MseI	TTAA	3 cut(s)	269, 836, 1208
MslI	CAYNNNNRTG	3 cut(s)	691, 800, 1230
Msp20I	TGGCCA	1 cut(s)	639
MspR9I	CCNGG	4 cut(s)	774, 951, 1296, 1515
Mva1269I	GAATGC	2 cut(s)	807, 980
MvaI	CCWGG	4 cut(s)	774, 951, 1296, 1515
MwoI	GCNNNNNNNGC	6 cut(s)	743, 986, 1007, 1045, 1070, 1199
NdeII	GATC	4 cut(s)	565, 608, 867, 956
NheI	GCTAGC	1 cut(s)	1198
NlaIII	CATG	9 cut(s)	115, 395, 692, 737, 875, 893, 1185, 1229, 1541
NlaIV	GGNNCC	3 cut(s)	751, 861, 1337
NmuCI	GTSAC	6 cut(s)	793, 904, 1354, 1379, 1403, 1486
NsiI	ATGCAT	1 cut(s)	982
NspI	RCATGY	2 cut(s)	893, 1185
OliI	CACNNNNGTG	1 cut(s)	691
PaeI	GCATGC	1 cut(s)	1185
PciSI	GCTCTTC	1 cut(s)	1311
PctI	GAATGC	2 cut(s)	807, 980
PfeI	GAWTC	5 cut(s)	410, 420, 478, 946, 1148
PflFI	GACNNNGTC	1 cut(s)	902
PflMI	CCANNNNNTGG	1 cut(s)	924
PfoI	TCCNGGA	2 cut(s)	772, 949
PkrI	GCNGC	5 cut(s)	118, 373, 1038, 1261, 1323
PleI	GAGTC	1 cut(s)	534
PpsI	GAGTC	1 cut(s)	534
Psp124BI	GAGCTC	1 cut(s)	1075
Psp6I	CCWGG	4 cut(s)	772, 949, 1294, 1513
PspEI	GGTNACC	3 cut(s)	793, 1270, 1403
PspGI	CCWGG	4 cut(s)	772, 949, 1294, 1513
PspN4I	GGNNCC	3 cut(s)	751, 861, 1337
PspPI	GGNCC	1 cut(s)	1441
PstI	CTGCAG	1 cut(s)	748
PsuI	RGATCY	1 cut(s)	956
PsyI	GACNNNGTC	1 cut(s)	902
RsaI	GTAC	4 cut(s)	486, 861, 1161, 1548
RsaNI	GTAC	4 cut(s)	485, 860, 1160, 1547
RseI	CAYNNNNRTG	3 cut(s)	691, 800, 1230
SacI	GAGCTC	1 cut(s)	1075
SapI	GCTCTTC	1 cut(s)	1311
SaqAI	TTAA	3 cut(s)	269, 836, 1208
SatI	GCNGC	5 cut(s)	117, 372, 1037, 1260, 1322
Sau3AI	GATC	4 cut(s)	565, 608, 867, 956
Sau96I	GGNCC	1 cut(s)	1441
SbfI	CCTGCAGG	1 cut(s)	748
SchI	GAGTC	1 cut(s)	534
ScrFI	CCNGG	4 cut(s)	774, 951, 1296, 1515
SdaI	CCTGCAGG	1 cut(s)	748
SduI	GDGCHC	2 cut(s)	754, 1075
SfaNI	GCATC	5 cut(s)	47, 203, 967, 1333, 1411
SfcI	CTRYAG	1 cut(s)	744
SinI	GGWCC	1 cut(s)	1441
SmiMI	CAYNNNNRTG	3 cut(s)	691, 800, 1230
SmlI	CTYRAG	2 cut(s)	61, 91
SmoI	CTYRAG	2 cut(s)	61, 91
SphI	GCATGC	1 cut(s)	1185
Sse8387I	CCTGCAGG	1 cut(s)	748
Sse9I	AATT	6 cut(s)	670, 717, 1217, 1251, 1433, 1521
SsiI	CCGC	3 cut(s)	226, 1322, 1439
SspI	AATATT	2 cut(s)	13, 49
SspMI	CTAG	4 cut(s)	453, 650, 909, 1199
SstI	GAGCTC	1 cut(s)	1075
StyD4I	CCNGG	4 cut(s)	772, 949, 1294, 1513
StyI	CCWWGG	1 cut(s)	414
TaaI	ACNGT	4 cut(s)	406, 1021, 1053, 1173
TaiI	ACGT	2 cut(s)	103, 1305
TaqI	TCGA	5 cut(s)	474, 1069, 1177, 1214, 1452
TasI	AATT	6 cut(s)	670, 717, 1217, 1251, 1433, 1521
TatI	WGTACW	1 cut(s)	484
TauI	GCSGC	1 cut(s)	1324
TfiI	GAWTC	5 cut(s)	410, 420, 478, 946, 1148
Tru1I	TTAA	3 cut(s)	269, 836, 1208
Tru9I	TTAA	3 cut(s)	269, 836, 1208
TscAI	CASTG	6 cut(s)	306, 411, 870, 1176, 1432, 1491
TseFI	GTSAC	6 cut(s)	793, 904, 1354, 1379, 1403, 1486
TseI	GCWGC	4 cut(s)	116, 371, 1036, 1259
Tsp45I	GTSAC	6 cut(s)	793, 904, 1354, 1379, 1403, 1486
TspDTI	ATGAA	4 cut(s)	133, 606, 1446, 1521
TspGWI	ACGGA	1 cut(s)	419
TspRI	CASTG	6 cut(s)	306, 411, 870, 1176, 1432, 1491
Tth111I	GACNNNGTC	1 cut(s)	902
Van91I	CCANNNNNTGG	1 cut(s)	924
VpaK11BI	GGWCC	1 cut(s)	1441
XapI	RAATTY	3 cut(s)	670, 717, 1433
XbaI	TCTAGA	1 cut(s)	649
XceI	RCATGY	2 cut(s)	893, 1185
XmiI	GTMKAC	1 cut(s)	580
XspI	CTAG	4 cut(s)	453, 650, 909, 1199
Zsp2I	ATGCAT	1 cut(s)	982

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.