Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0005140

Physical Location & Seq

Genomic Coordinates Forward (+)

13585848 .. 13590797

Gene Structure 4950 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00092020.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1371 bp

ATGGATGGTGGGAACATTGTTGGATGCTCAAGGTTGATGAGAAGATACACATCAGCCTCAAGCAGACGTGTATTAGACATGGCTGCTAGAGATGGGGAGCTGAGGGTCTTCATAGTTTCTGGAGAGGTTTCTGGCGACACCATTGGCTCTCGTCTGATGGCATCTCTAAAGAAGCTCTCTCCTGTTCCAGTCTGCTTTTCTGGTGTTGGAGGGACTATGATGTCCAATCAAGGATTAAAATCTGTATTTCCTATGGAGGATATTGCAGTGATGGGATTGTTGGAGTTATTGCCTCATCTAAATAAACTCAGACTGAAGTTGCAGGAGACATTAGAAGCTGCTCTTCTGTTTCAACCTCATGTTGTTGTAACAGTGGATTCCAAGGGATTCTCTTTCCGTCTTCTAAAGCAGTTACGGGCTAGATACAATAAAAAAAGCTTCGAGATTCCAGTACACTTCCATTATGTAGCACCATCATTCTGGGCTTGGAAAGGGGGTGAAGCAAGACTCAGAGGCTTAGCTGGATTTGTGGATCATATTCTGTGTATACTTCCGAATGAAGAAGAAGTTTGCAAATCAAATGGATTGGTTGCAACCTTTGTTGGCCACCCTATTCTAGAGGATGTGTGGGAGTTGAATTTGGATACTTTACCACATGAATGGAAAATAGAAGGAAACTCAGAAATTTTCAGAAGAAATCATGCAATACCTGCAGGAGCCCCAATCATTTCCTTGCTTCCTGGAAGCAGATTACAGGAGGTCACCAGAATGCTTTCTCTCTTTGCAAATACCATCGAACTATTAAAAGTCTCCTTTCCTGAGTTGGTACCAGTGATCCATGTCGCTACTAATCAGCATGTGAAGGACTATGTCACTAGATTTACCAACAAGTGGCCTGTGCCTGCTATATTGATTCCAGGAGGATCTCTGCACCAGAAATATGATGCATTCAGCGCAAGTAGTGTTGCATTATGTGCTTCTGGAACAGTTGCTTTGGAGTTGCAGCTTGCACGGCTACCGTGTGTAGTTGCTTATCGAGCTCATTTCCTAACTGAGTGGATTATTCGCTATAAAGCCAAGATATCTTACATCTCCCTCCCAAATATCTTGTTGGATTCAGCTATCATACCTGAAGCACTGTTTCAAGCATGCACTCCGGCAAAGCTAGCCTCATTAACATTGAAATTGATACATGACAATGGCCTCCGAGAAAAACAAATTGTTGCTGCTGAAAAGGTTACCCGACTTCTGTGTGCTTCACCTGGAAACTTAGATAACTTGGAAGAGCCGCATCAAAGATGGAGGTTTCCCCATTACACACCGAGTATGATAGCAGCATCCGCAATACTGTGCCATCTGAAGCCATATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0005975 GO:0006040 GO:0006629 GO:0006643 GO:0006644 GO:0006664 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008194 GO:0008289 GO:0008610 GO:0008654 GO:0008915 GO:0009058 GO:0009245 GO:0009247 GO:0009311 GO:0009312 GO:0009987 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019637 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046467 GO:0046493 GO:0071704 GO:0090407 GO:1901135 GO:1901137 GO:1901269 GO:1901271 GO:1901576 GO:1903509 GO:2001289

KEGG Pathways

Metabolic & Signaling

ko00540 ko01100 map00540 map01100

Pfam Domains

Protein Families

LpxB

Protein Analysis

456

Amino Acids

50.65

Weight (kDa)

9.04

Isoelectric Point (pI)

45.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LpxB	PF02684	36 - 417	8e-76	Lipid-A-disaccharide synthetase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005140)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04560
fragaria_vesca	FvH4_6g41870 FvH4_6g41870 FvH4_6g41870 FvH4_6g41870 FvH4_6g41870 FvH4_6g41870
malus_domestica	MD09G1116800.v1.1
prunus_persica	Prupe.3G208000_v2.0.a1 Prupe.3G208000_v2.0.a1 Prupe.3G208000_v2.0.a1 Prupe.3G208000_v2.0.a1 Prupe.3G208000_v2.0.a1
pyrus_communis	pycom09g04140 pycom17g10060
rosa_chinensis	RchiOBHm_Chr2g0157701 RchiOBHm_Chr2g0157711
rosa_laevigata	RLG00000021009
rosa_multiflora	Rmu_sc0001275.1_g000003
rosa_roxburghii	Rroxscaffold_2G00092020
rosa_rugosa	Rorug02G0462900
rosa_samantha	Rh2AG527200 Rh2AG527300 Rh2BG542000 Rh2BG542100 Rh2CG511700 Rh2CG511800 Rh2DG550600 Rh2DG550700
rosa_wichuraiana	Rw2G043660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	220
Acc36I	ACCTGC	1 cut(s)	718
Acc65I	GGTACC	1 cut(s)	826
AccB1I	GGYRCC	1 cut(s)	826
AccB7I	CCANNNNNTGG	1 cut(s)	891
AccI	GTMKAC	1 cut(s)	547
AciI	CCGC	2 cut(s)	1289, 1341
AclWI	GGATC	3 cut(s)	540, 829, 931
AcoI	YGGCCR	1 cut(s)	604
AcsI	RAATTY	2 cut(s)	637, 684
AcuI	CTGAAG	2 cut(s)	335, 1152
AfaI	GTAC	2 cut(s)	453, 828
AfiI	CCNNNNNNNGG	1 cut(s)	891
AflIII	ACRYGT	1 cut(s)	67
AgsI	TTSAA	4 cut(s)	353, 637, 1145, 1183
AjiI	CACGTC	1 cut(s)	68
AjnI	CCWGG	3 cut(s)	739, 916, 1261
AluBI	AGCT	9 cut(s)	100, 175, 338, 438, 521, 1006, 1040, 1121, 1165
AluI	AGCT	9 cut(s)	100, 175, 338, 438, 521, 1006, 1040, 1121, 1165
Alw21I	GWGCWC	1 cut(s)	1042
Alw26I	GTCTC	2 cut(s)	320, 814
AlwI	GGATC	3 cut(s)	540, 829, 931
AoxI	GGCC	3 cut(s)	604, 893, 1201
ApeKI	GCWGC	5 cut(s)	83, 338, 1003, 1226, 1334
ApoI	RAATTY	2 cut(s)	637, 684
Asp700I	GAANNNNTTC	1 cut(s)	772
Asp718I	GGTACC	1 cut(s)	826
AspLEI	GCGC	1 cut(s)	956
AsuHPI	GGTGA	3 cut(s)	509, 754, 1251
AsuNHI	GCTAGC	1 cut(s)	1165
BalI	TGGCCA	1 cut(s)	606
BanI	GGYRCC	1 cut(s)	826
BanII	GRGCYC	2 cut(s)	721, 1042
BbsI	GAAGAC	2 cut(s)	100, 392
Bbv12I	GWGCWC	1 cut(s)	1042
BbvCI	CCTCAGC	1 cut(s)	101
BbvI	GCAGC	5 cut(s)	70, 325, 1015, 1213, 1346
BccI	CCATC	7 cut(s)	86, 151, 265, 481, 800, 1293, 1362
BceAI	ACGGC	1 cut(s)	1028
BciT130I	CCWGG	3 cut(s)	741, 918, 1263
BciVI	GTATCC	1 cut(s)	637
BcoDI	GTCTC	2 cut(s)	320, 814
BfaI	CTAG	5 cut(s)	87, 420, 617, 876, 1166
BfmI	CTRYAG	1 cut(s)	711
BfuAI	ACCTGC	1 cut(s)	718
BfuI	GTATCC	1 cut(s)	637
BisI	GCNGC	6 cut(s)	84, 339, 1004, 1227, 1289, 1335
BlpI	GCTNAGC	1 cut(s)	517
BlsI	GCNGC	6 cut(s)	85, 340, 1005, 1228, 1290, 1336
Bme1390I	CCNGG	3 cut(s)	741, 918, 1263
BmgBI	CACGTC	1 cut(s)	68
BmiI	GGNNCC	2 cut(s)	718, 828
BmrFI	CCNGG	3 cut(s)	741, 918, 1263
BmsI	GCATC	5 cut(s)	14, 170, 934, 1300, 1346
BmtI	GCTAGC	1 cut(s)	1169
BpiI	GAAGAC	2 cut(s)	100, 392
BpmI	CTGGAG	1 cut(s)	141
Bpu10I	CCTNAGC	1 cut(s)	101
Bpu1102I	GCTNAGC	1 cut(s)	517
BpuEI	CTTGAG	2 cut(s)	13, 43
BsaBI	GATNNNNATC	2 cut(s)	49, 238
BsaJI	CCNNGG	1 cut(s)	381
Bsc4I	CCNNNNNNNGG	1 cut(s)	891
Bse1I	ACTGG	3 cut(s)	188, 449, 830
Bse8I	GATNNNNATC	2 cut(s)	49, 238
BseBI	CCWGG	3 cut(s)	741, 918, 1263
BseDI	CCNNGG	1 cut(s)	381
BseGI	GGATG	4 cut(s)	10, 29, 628, 1337
BseJI	GATNNNNATC	2 cut(s)	49, 238
BseLI	CCNNNNNNNGG	1 cut(s)	891
BseMII	CTCAG	6 cut(s)	92, 322, 523, 693, 810, 1044
BseNI	ACTGG	3 cut(s)	188, 449, 830
BseXI	GCAGC	5 cut(s)	70, 325, 1015, 1213, 1346
BsgI	GTGCAG	1 cut(s)	914
BshFI	GGCC	3 cut(s)	606, 895, 1203
BshNI	GGYRCC	1 cut(s)	826
BsiHKAI	GWGCWC	1 cut(s)	1042
BsiSI	CCGG	1 cut(s)	1157
BslFI	GGGAC	1 cut(s)	226
BslI	CCNNNNNNNGG	1 cut(s)	891
BsmAI	GTCTC	2 cut(s)	320, 814
BsmFI	GGGAC	1 cut(s)	226
BsmI	GAATGC	2 cut(s)	774, 947
BsnI	GGCC	3 cut(s)	606, 895, 1203
Bsp1286I	GDGCHC	2 cut(s)	721, 1042
Bsp143I	GATC	3 cut(s)	532, 834, 923
Bsp1720I	GCTNAGC	1 cut(s)	517
BspACI	CCGC	2 cut(s)	1289, 1341
BspANI	GGCC	3 cut(s)	606, 895, 1203
BspCNI	CTCAG	6 cut(s)	93, 321, 522, 692, 811, 1045
BspLI	GGNNCC	2 cut(s)	718, 828
BspMAI	CTGCAG	1 cut(s)	715
BspMI	ACCTGC	1 cut(s)	718
BspOI	GCTAGC	1 cut(s)	1169
BspPI	GGATC	3 cut(s)	540, 829, 931
BspQI	GCTCTTC	2 cut(s)	348, 1278
BspT107I	GGYRCC	1 cut(s)	826
BsrI	ACTGG	3 cut(s)	188, 449, 830
BssECI	CCNNGG	1 cut(s)	381
BssMI	GATC	3 cut(s)	532, 834, 923
BssNAI	GTATAC	1 cut(s)	548
BssT1I	CCWWGG	1 cut(s)	381
Bst1107I	GTATAC	1 cut(s)	548
Bst2UI	CCWGG	3 cut(s)	741, 918, 1263
Bst4CI	ACNGT	5 cut(s)	373, 988, 1020, 1140, 1350
Bst6I	CTCTTC	2 cut(s)	348, 1278
BstAPI	GCANNNNNTGC	2 cut(s)	710, 974
BstC8I	GCNNGC	4 cut(s)	903, 1008, 1150, 1167
BstDEI	CTNAG	8 cut(s)	101, 308, 509, 517, 679, 819, 1053, 1270
BstEII	GGTNACC	2 cut(s)	760, 1237
BstF5I	GGATG	4 cut(s)	10, 29, 628, 1337
BstHHI	GCGC	1 cut(s)	956
BstKTI	GATC	3 cut(s)	535, 837, 926
BstMAI	GTCTC	2 cut(s)	320, 814
BstMBI	GATC	3 cut(s)	532, 834, 923
BstMWI	GCNNNNNNNGC	7 cut(s)	710, 953, 974, 1012, 1037, 1166, 1340
BstNI	CCWGG	3 cut(s)	741, 918, 1263
BstNSI	RCATGY	2 cut(s)	860, 1152
BstPI	GGTNACC	2 cut(s)	760, 1237
BstSCI	CCNGG	3 cut(s)	739, 916, 1261
BstSFI	CTRYAG	1 cut(s)	711
BstV1I	GCAGC	5 cut(s)	70, 325, 1015, 1213, 1346
BstV2I	GAAGAC	2 cut(s)	100, 392
BstX2I	RGATCY	1 cut(s)	923
BstXI	CCANNNNNNTGG	2 cut(s)	480, 660
BstYI	RGATCY	1 cut(s)	923
BstZ17I	GTATAC	1 cut(s)	548
BsuI	GTATCC	1 cut(s)	637
BsuRI	GGCC	3 cut(s)	606, 895, 1203
BtrI	CACGTC	1 cut(s)	68
BtsCI	GGATG	4 cut(s)	10, 29, 628, 1337
BtsI	GCAGTG	1 cut(s)	273
BtsIMutI	CAGTG	4 cut(s)	273, 378, 837, 1136
BveI	ACCTGC	1 cut(s)	718
Cac8I	GCNNGC	4 cut(s)	903, 1008, 1150, 1167
CfoI	GCGC	1 cut(s)	956
Csp6I	GTAC	2 cut(s)	452, 827
CviAII	CATG	8 cut(s)	79, 359, 656, 701, 839, 857, 1149, 1193
CviQI	GTAC	2 cut(s)	452, 827
DdeI	CTNAG	8 cut(s)	101, 308, 509, 517, 679, 819, 1053, 1270
DpnI	GATC	3 cut(s)	534, 836, 925
DpnII	GATC	3 cut(s)	532, 834, 923
DrdI	GACNNNNNNGTC	1 cut(s)	220
DseDI	GACNNNNNNGTC	1 cut(s)	220
EaeI	YGGCCR	1 cut(s)	604
Eam1104I	CTCTTC	2 cut(s)	348, 1278
EarI	CTCTTC	2 cut(s)	348, 1278
Ecl136II	GAGCTC	1 cut(s)	1040
Eco130I	CCWWGG	1 cut(s)	381
Eco24I	GRGCYC	2 cut(s)	721, 1042
Eco32I	GATATC	1 cut(s)	1083
Eco53kI	GAGCTC	1 cut(s)	1040
Eco57I	CTGAAG	2 cut(s)	335, 1152
Eco91I	GGTNACC	2 cut(s)	760, 1237
EcoICRI	GAGCTC	1 cut(s)	1040
EcoO65I	GGTNACC	2 cut(s)	760, 1237
EcoRII	CCWGG	3 cut(s)	739, 916, 1261
EcoRV	GATATC	1 cut(s)	1083
EcoT14I	CCWWGG	1 cut(s)	381
EcoT22I	ATGCAT	1 cut(s)	949
EcoT38I	GRGCYC	2 cut(s)	721, 1042
ErhI	CCWWGG	1 cut(s)	381
FaeI	CATG	8 cut(s)	82, 362, 659, 704, 842, 860, 1152, 1196
FalI	AAGNNNNNCTT	2 cut(s)	327, 359
FaqI	GGGAC	1 cut(s)	226
FatI	CATG	8 cut(s)	78, 358, 655, 700, 838, 856, 1148, 1192
FblI	GTMKAC	1 cut(s)	547
Fnu4HI	GCNGC	6 cut(s)	84, 339, 1004, 1227, 1289, 1335
FokI	GGATG	4 cut(s)	17, 36, 635, 1324
FriOI	GRGCYC	2 cut(s)	721, 1042
Fsp4HI	GCNGC	6 cut(s)	84, 339, 1004, 1227, 1289, 1335
FspBI	CTAG	5 cut(s)	87, 420, 617, 876, 1166
GlaI	GCGC	1 cut(s)	955
GluI	GCNGC	6 cut(s)	84, 339, 1004, 1227, 1289, 1335
GsuI	CTGGAG	1 cut(s)	141
HaeIII	GGCC	3 cut(s)	606, 895, 1203
HapII	CCGG	1 cut(s)	1157
HhaI	GCGC	1 cut(s)	956
Hin1II	CATG	8 cut(s)	82, 362, 659, 704, 842, 860, 1152, 1196
Hin6I	GCGC	1 cut(s)	954
HinP1I	GCGC	1 cut(s)	954
HindIII	AAGCTT	1 cut(s)	436
HinfI	GANTC	6 cut(s)	377, 387, 445, 507, 913, 1115
HpaII	CCGG	1 cut(s)	1157
HphI	GGTGA	3 cut(s)	509, 754, 1251
Hpy166II	GTNNAC	2 cut(s)	454, 548
Hpy188I	TCNGA	8 cut(s)	156, 311, 512, 555, 682, 692, 1208, 1359
Hpy188III	TCNNGA	5 cut(s)	120, 442, 617, 818, 981
Hpy8I	GTNNAC	2 cut(s)	454, 548
HpyAV	CCTTC	2 cut(s)	665, 856
HpyCH4III	ACNGT	5 cut(s)	373, 988, 1020, 1140, 1350
HpyCH4IV	ACGT	1 cut(s)	67
HpyF10VI	GCNNNNNNNGC	7 cut(s)	710, 953, 974, 1012, 1037, 1166, 1340
HpyF3I	CTNAG	8 cut(s)	101, 308, 509, 517, 679, 819, 1053, 1270
HpySE526I	ACGT	1 cut(s)	67
Hsp92II	CATG	8 cut(s)	82, 362, 659, 704, 842, 860, 1152, 1196
HspAI	GCGC	1 cut(s)	954
KpnI	GGTACC	1 cut(s)	830
Kzo9I	GATC	3 cut(s)	532, 834, 923
LguI	GCTCTTC	2 cut(s)	348, 1278
LmnI	GCTCC	2 cut(s)	97, 716
Lsp1109I	GCAGC	5 cut(s)	70, 325, 1015, 1213, 1346
LweI	GCATC	5 cut(s)	14, 170, 934, 1300, 1346
MaeI	CTAG	5 cut(s)	87, 420, 617, 876, 1166
MaeII	ACGT	1 cut(s)	67
MaeIII	GTNAC	5 cut(s)	367, 411, 760, 871, 1237
MalI	GATC	3 cut(s)	534, 836, 925
MboI	GATC	3 cut(s)	532, 834, 923
MboII	GAAGA	8 cut(s)	54, 100, 335, 392, 572, 575, 705, 1295
MflI	RGATCY	1 cut(s)	923
MhlI	GDGCHC	2 cut(s)	721, 1042
MlsI	TGGCCA	1 cut(s)	606
MluCI	AATT	4 cut(s)	637, 684, 1184, 1218
MluNI	TGGCCA	1 cut(s)	606
MlyI	GAGTC	1 cut(s)	501
MmeI	TCCRAC	3 cut(s)	187, 261, 1092
Mox20I	TGGCCA	1 cut(s)	606
Mph1103I	ATGCAT	1 cut(s)	949
MroXI	GAANNNNTTC	1 cut(s)	772
MscI	TGGCCA	1 cut(s)	606
MseI	TTAA	3 cut(s)	236, 803, 1175
MslI	CAYNNNNRTG	3 cut(s)	658, 767, 1197
Msp20I	TGGCCA	1 cut(s)	606
MspI	CCGG	1 cut(s)	1157
MspR9I	CCNGG	3 cut(s)	741, 918, 1263
Mva1269I	GAATGC	2 cut(s)	774, 947
MvaI	CCWGG	3 cut(s)	741, 918, 1263
MwoI	GCNNNNNNNGC	7 cut(s)	710, 953, 974, 1012, 1037, 1166, 1340
NdeII	GATC	3 cut(s)	532, 834, 923
NheI	GCTAGC	1 cut(s)	1165
NlaIII	CATG	8 cut(s)	82, 362, 659, 704, 842, 860, 1152, 1196
NlaIV	GGNNCC	2 cut(s)	718, 828
NmuCI	GTSAC	2 cut(s)	760, 871
NsiI	ATGCAT	1 cut(s)	949
NspI	RCATGY	2 cut(s)	860, 1152
PaeI	GCATGC	1 cut(s)	1152
PciSI	GCTCTTC	2 cut(s)	348, 1278
PctI	GAATGC	2 cut(s)	774, 947
PdmI	GAANNNNTTC	1 cut(s)	772
PfeI	GAWTC	5 cut(s)	377, 387, 445, 913, 1115
PflFI	GACNNNGTC	1 cut(s)	869
PflMI	CCANNNNNTGG	1 cut(s)	891
PfoI	TCCNGGA	2 cut(s)	739, 916
PkrI	GCNGC	6 cut(s)	85, 340, 1005, 1228, 1290, 1336
PleI	GAGTC	1 cut(s)	501
PpsI	GAGTC	1 cut(s)	501
Psp124BI	GAGCTC	1 cut(s)	1042
Psp6I	CCWGG	3 cut(s)	739, 916, 1261
PspEI	GGTNACC	2 cut(s)	760, 1237
PspGI	CCWGG	3 cut(s)	739, 916, 1261
PspN4I	GGNNCC	2 cut(s)	718, 828
PstI	CTGCAG	1 cut(s)	715
PsuI	RGATCY	1 cut(s)	923
PsyI	GACNNNGTC	1 cut(s)	869
RsaI	GTAC	2 cut(s)	453, 828
RsaNI	GTAC	2 cut(s)	452, 827
RseI	CAYNNNNRTG	3 cut(s)	658, 767, 1197
SacI	GAGCTC	1 cut(s)	1042
SapI	GCTCTTC	2 cut(s)	348, 1278
SaqAI	TTAA	3 cut(s)	236, 803, 1175
SatI	GCNGC	6 cut(s)	84, 339, 1004, 1227, 1289, 1335
Sau3AI	GATC	3 cut(s)	532, 834, 923
SbfI	CCTGCAGG	1 cut(s)	715
SchI	GAGTC	1 cut(s)	501
ScrFI	CCNGG	3 cut(s)	741, 918, 1263
SdaI	CCTGCAGG	1 cut(s)	715
SduI	GDGCHC	2 cut(s)	721, 1042
SfaNI	GCATC	5 cut(s)	14, 170, 934, 1300, 1346
SfcI	CTRYAG	1 cut(s)	711
SmiMI	CAYNNNNRTG	3 cut(s)	658, 767, 1197
SmlI	CTYRAG	2 cut(s)	28, 58
SmoI	CTYRAG	2 cut(s)	28, 58
SphI	GCATGC	1 cut(s)	1152
Sse8387I	CCTGCAGG	1 cut(s)	715
Sse9I	AATT	4 cut(s)	637, 684, 1184, 1218
SsiI	CCGC	2 cut(s)	1289, 1341
SspMI	CTAG	5 cut(s)	87, 420, 617, 876, 1166
SstI	GAGCTC	1 cut(s)	1042
StyD4I	CCNGG	3 cut(s)	739, 916, 1261
StyI	CCWWGG	1 cut(s)	381
TaaI	ACNGT	5 cut(s)	373, 988, 1020, 1140, 1350
TaiI	ACGT	1 cut(s)	70
TaqI	TCGA	3 cut(s)	441, 795, 1036
TasI	AATT	4 cut(s)	637, 684, 1184, 1218
TatI	WGTACW	1 cut(s)	451
TauI	GCSGC	1 cut(s)	1291
TfiI	GAWTC	5 cut(s)	377, 387, 445, 913, 1115
Tru1I	TTAA	3 cut(s)	236, 803, 1175
Tru9I	TTAA	3 cut(s)	236, 803, 1175
TscAI	CASTG	4 cut(s)	273, 378, 837, 1143
TseFI	GTSAC	2 cut(s)	760, 871
TseI	GCWGC	5 cut(s)	83, 338, 1003, 1226, 1334
Tsp45I	GTSAC	2 cut(s)	760, 871
TspDTI	ATGAA	3 cut(s)	100, 573, 672
TspGWI	ACGGA	1 cut(s)	386
TspRI	CASTG	4 cut(s)	273, 378, 837, 1143
Tth111I	GACNNNGTC	1 cut(s)	869
Van91I	CCANNNNNTGG	1 cut(s)	891
XapI	RAATTY	2 cut(s)	637, 684
XbaI	TCTAGA	1 cut(s)	616
XceI	RCATGY	2 cut(s)	860, 1152
XmiI	GTMKAC	1 cut(s)	547
XmnI	GAANNNNTTC	1 cut(s)	772
XspI	CTAG	5 cut(s)	87, 420, 617, 876, 1166
Zsp2I	ATGCAT	1 cut(s)	949

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.