Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0005140

Physical Location & Seq

Genomic Coordinates Reverse (-)

70116697 .. 70120088

Gene Structure 3392 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G043660.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1452 bp

ATGTGGTTCAGAAAAATATGGAATGTGGATGGTGGGAATATTGTTGGATGCTCAAGGTTGATGAGAAGATACACATCAGCCTCAAGCAGACGTGTATTAGACATGGCTGCTAAAGATGGGGAGCTGAGGGTCTTCATAGTTTCTGGAGAGGTTTCTGGCGACACCATTGGCTTTCGTCTGATGGCATCTCTAAAGAAGCTCTCTCCTGTTCCAGTCCGCTTTTCTGGTGTTGGAGGGACTATGATGTCCAATCAAGGATTAAAATCTGTATTTCCTATGGAGGATATTGCAGTGATGGGATTGTTGGAGTTATTGCCTCATCTAAATAAACTCAGACTGAAGTTGCAGGAGACATTAGAAGCTGCTCTTCTGTTTCAACCTCATGTTGTTGTAACAGTGGATTCCAAGGGATTCTCTTTCCGTCTTCTAAAGCAGTTACGGGCTAGATACAATCAAAAAAGCTTCGAGATTCCAGTACACTTCCATTATGTAGCACCATCATTCTGGGCTTGGAAAGGGGGTGAAGCAAGACTCAGAGGCTTAGCTGGATTTGTGGATCATATTCTGTGTATACTTCCGAATGAAGAAGAAGTTTGCAGATCAAATGGATTGGTTGCAACCTTTGTTGGCCACCCTATTCTAGAGGATGTGTGGGAGTTGAATTTGGATACTTTACCACATGAATGGAAAATAGAAGGAAACTCAAAATTTTCAGAAGAAATCATGCAATACCTGCAGGTAAGATTTAATGAAGTTAATTTTCATAAAGTTTTAATATTGTATGTGATACCTGAGAGAGCCCCAATCATTTCCTTGCTTCCTGGAAGCAGATTACAGGAGGTCACCAGAATGCTTTCTCTCTTTGCAAATACCATCGAACTATTAAAAGTCTCCTTTCCTGAGTTGGTACCAGTGATCCATGTCGCTACAAATCAGCATGTGAAGGACTATGTCACTAGATTTACCAACAAGTGGCCTGTGCCTGCTATATTGATTCCAGGAGGATCTCTGCACCAGAAATATGATGCATTCAGCGCAAGTAGTGTTGCATTATGTGCTTCTGGAACAGTTGCTTTGGAGTTGCAGCTTGCACGGCTACCGTGTGTAGTTGCTTATCGAGCTCATTTCCTAACTGAGTGGATTATTCGCTATAAAGCCAAGATATCTTACATCTCCCTCCCAAATATCTTGTTGGATTCAGCTATCATACCTGAAGCACTGTTTCAAGTATGCACTCCAGCAAAGCTAGCCTCATTAACATCGAAATTGATACATAACGATGGCCTCCGAGAAAAACAAATTGTTGCTGCTGAAAAGGTTACCCGACTTCTGTGTGCTTCACCTGGAAACTTAGGTAACTTGGAAGAGCCGCATCAAAGATGGAGGTTTCCCCATTACACACCGAGTATGATAGCAGCATCTGCAATACTGTGCCATCTGAAGCCATATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005488 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005829 GO:0005975 GO:0006040 GO:0006629 GO:0006643 GO:0006644 GO:0006664 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0008194 GO:0008289 GO:0008610 GO:0008654 GO:0008915 GO:0009058 GO:0009245 GO:0009247 GO:0009311 GO:0009312 GO:0009987 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0019637 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046467 GO:0046493 GO:0071704 GO:0090407 GO:1901135 GO:1901137 GO:1901269 GO:1901271 GO:1901576 GO:1903509 GO:2001289

KEGG Pathways

Metabolic & Signaling

ko00540 ko01100 map00540 map01100

Pfam Domains

Protein Families

LpxB

Protein Analysis

483

Amino Acids

54.34

Weight (kDa)

9.2

Isoelectric Point (pI)

43.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LpxB	PF02684	44 - 223	1.8e-39	Lipid-A-disaccharide synthetase
LpxB	PF02684	262 - 443	4.6e-33	Lipid-A-disaccharide synthetase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005140)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G04560
fragaria_vesca	FvH4_6g41870 FvH4_6g41870 FvH4_6g41870 FvH4_6g41870 FvH4_6g41870 FvH4_6g41870
malus_domestica	MD09G1116800.v1.1
prunus_persica	Prupe.3G208000_v2.0.a1 Prupe.3G208000_v2.0.a1 Prupe.3G208000_v2.0.a1 Prupe.3G208000_v2.0.a1 Prupe.3G208000_v2.0.a1
pyrus_communis	pycom09g04140 pycom17g10060
rosa_chinensis	RchiOBHm_Chr2g0157701 RchiOBHm_Chr2g0157711
rosa_laevigata	RLG00000021009
rosa_multiflora	Rmu_sc0001275.1_g000003
rosa_roxburghii	Rroxscaffold_2G00092020
rosa_rugosa	Rorug02G0462900
rosa_samantha	Rh2AG527200 Rh2AG527300 Rh2BG542000 Rh2BG542100 Rh2CG511700 Rh2CG511800 Rh2DG550600 Rh2DG550700
rosa_wichuraiana	Rw2G043660

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	244
Acc36I	ACCTGC	2 cut(s)	727, 741
Acc65I	GGTACC	1 cut(s)	907
AccB1I	GGYRCC	1 cut(s)	907
AccB7I	CCANNNNNTGG	1 cut(s)	972
AccI	GTMKAC	1 cut(s)	571
AciI	CCGC	2 cut(s)	217, 1370
AclWI	GGATC	3 cut(s)	564, 910, 1012
AcoI	YGGCCR	1 cut(s)	628
AcsI	RAATTY	2 cut(s)	661, 707
AcuI	CTGAAG	2 cut(s)	359, 1233
AfaI	GTAC	2 cut(s)	477, 909
AfiI	CCNNNNNNNGG	1 cut(s)	972
AflIII	ACRYGT	1 cut(s)	91
AgsI	TTSAA	3 cut(s)	377, 661, 1226
AjiI	CACGTC	1 cut(s)	92
AjnI	CCWGG	3 cut(s)	820, 997, 1342
AluBI	AGCT	9 cut(s)	124, 199, 362, 462, 545, 1087, 1121, 1202, 1246
AluI	AGCT	9 cut(s)	124, 199, 362, 462, 545, 1087, 1121, 1202, 1246
Alw21I	GWGCWC	1 cut(s)	1123
Alw26I	GTCTC	2 cut(s)	344, 895
AlwI	GGATC	3 cut(s)	564, 910, 1012
AlwNI	CAGNNNCTG	1 cut(s)	1421
AoxI	GGCC	3 cut(s)	628, 974, 1282
ApeKI	GCWGC	5 cut(s)	107, 362, 1084, 1307, 1415
ApoI	RAATTY	2 cut(s)	661, 707
Asp700I	GAANNNNTTC	1 cut(s)	853
Asp718I	GGTACC	1 cut(s)	907
AspLEI	GCGC	1 cut(s)	1037
AsuHPI	GGTGA	3 cut(s)	533, 835, 1332
AsuNHI	GCTAGC	1 cut(s)	1246
BalI	TGGCCA	1 cut(s)	630
BanI	GGYRCC	1 cut(s)	907
BanII	GRGCYC	2 cut(s)	802, 1123
BbsI	GAAGAC	2 cut(s)	124, 416
Bbv12I	GWGCWC	1 cut(s)	1123
BbvCI	CCTCAGC	1 cut(s)	125
BbvI	GCAGC	5 cut(s)	94, 349, 1096, 1294, 1427
BccI	CCATC	9 cut(s)	23, 110, 175, 289, 505, 881, 1274, 1374, 1443
BceAI	ACGGC	1 cut(s)	1109
BciT130I	CCWGG	3 cut(s)	822, 999, 1344
BciVI	GTATCC	1 cut(s)	661
BcoDI	GTCTC	2 cut(s)	344, 895
BfaI	CTAG	4 cut(s)	444, 641, 957, 1247
BfmI	CTRYAG	1 cut(s)	734
BfuAI	ACCTGC	2 cut(s)	727, 741
BfuI	GTATCC	1 cut(s)	661
BisI	GCNGC	6 cut(s)	108, 363, 1085, 1308, 1370, 1416
BlpI	GCTNAGC	1 cut(s)	541
BlsI	GCNGC	6 cut(s)	109, 364, 1086, 1309, 1371, 1417
Bme1390I	CCNGG	3 cut(s)	822, 999, 1344
BmgBI	CACGTC	1 cut(s)	92
BmiI	GGNNCC	1 cut(s)	909
BmrFI	CCNGG	3 cut(s)	822, 999, 1344
BmsI	GCATC	5 cut(s)	38, 194, 1015, 1381, 1427
BmtI	GCTAGC	1 cut(s)	1250
BpiI	GAAGAC	2 cut(s)	124, 416
BpmI	CTGGAG	2 cut(s)	165, 1221
Bpu10I	CCTNAGC	1 cut(s)	125
Bpu1102I	GCTNAGC	1 cut(s)	541
BpuEI	CTTGAG	2 cut(s)	37, 67
BsaBI	GATNNNNATC	2 cut(s)	73, 262
BsaJI	CCNNGG	1 cut(s)	405
Bsc4I	CCNNNNNNNGG	1 cut(s)	972
Bse1I	ACTGG	3 cut(s)	212, 473, 911
Bse8I	GATNNNNATC	2 cut(s)	73, 262
BseBI	CCWGG	3 cut(s)	822, 999, 1344
BseDI	CCNNGG	1 cut(s)	405
BseGI	GGATG	3 cut(s)	34, 53, 652
BseJI	GATNNNNATC	2 cut(s)	73, 262
BseLI	CCNNNNNNNGG	1 cut(s)	972
BseMII	CTCAG	6 cut(s)	116, 346, 547, 783, 891, 1125
BseNI	ACTGG	3 cut(s)	212, 473, 911
BseXI	GCAGC	5 cut(s)	94, 349, 1096, 1294, 1427
BsgI	GTGCAG	1 cut(s)	995
BshFI	GGCC	3 cut(s)	630, 976, 1284
BshNI	GGYRCC	1 cut(s)	907
BsiHKAI	GWGCWC	1 cut(s)	1123
BslFI	GGGAC	1 cut(s)	250
BslI	CCNNNNNNNGG	1 cut(s)	972
BsmAI	GTCTC	2 cut(s)	344, 895
BsmFI	GGGAC	1 cut(s)	250
BsmI	GAATGC	2 cut(s)	855, 1028
BsnI	GGCC	3 cut(s)	630, 976, 1284
Bsp1286I	GDGCHC	2 cut(s)	802, 1123
Bsp143I	GATC	4 cut(s)	556, 599, 915, 1004
Bsp1720I	GCTNAGC	1 cut(s)	541
BspACI	CCGC	2 cut(s)	217, 1370
BspANI	GGCC	3 cut(s)	630, 976, 1284
BspCNI	CTCAG	6 cut(s)	117, 345, 546, 784, 892, 1126
BspLI	GGNNCC	1 cut(s)	909
BspMAI	CTGCAG	1 cut(s)	738
BspMI	ACCTGC	2 cut(s)	727, 741
BspOI	GCTAGC	1 cut(s)	1250
BspPI	GGATC	3 cut(s)	564, 910, 1012
BspQI	GCTCTTC	2 cut(s)	372, 1359
BspT107I	GGYRCC	1 cut(s)	907
BsrI	ACTGG	3 cut(s)	212, 473, 911
BssECI	CCNNGG	1 cut(s)	405
BssMI	GATC	4 cut(s)	556, 599, 915, 1004
BssNAI	GTATAC	1 cut(s)	572
BssT1I	CCWWGG	1 cut(s)	405
Bst1107I	GTATAC	1 cut(s)	572
Bst2UI	CCWGG	3 cut(s)	822, 999, 1344
Bst4CI	ACNGT	5 cut(s)	397, 1069, 1101, 1221, 1431
Bst6I	CTCTTC	2 cut(s)	372, 1359
BstAPI	GCANNNNNTGC	3 cut(s)	733, 1055, 1421
BstC8I	GCNNGC	3 cut(s)	984, 1089, 1248
BstDEI	CTNAG	8 cut(s)	125, 332, 533, 541, 792, 900, 1134, 1351
BstEII	GGTNACC	2 cut(s)	841, 1318
BstF5I	GGATG	3 cut(s)	34, 53, 652
BstHHI	GCGC	1 cut(s)	1037
BstKTI	GATC	4 cut(s)	559, 602, 918, 1007
BstMAI	GTCTC	2 cut(s)	344, 895
BstMBI	GATC	4 cut(s)	556, 599, 915, 1004
BstMWI	GCNNNNNNNGC	7 cut(s)	733, 1034, 1055, 1093, 1118, 1247, 1421
BstNI	CCWGG	3 cut(s)	822, 999, 1344
BstNSI	RCATGY	1 cut(s)	941
BstPI	GGTNACC	2 cut(s)	841, 1318
BstSCI	CCNGG	3 cut(s)	820, 997, 1342
BstSFI	CTRYAG	1 cut(s)	734
BstV1I	GCAGC	5 cut(s)	94, 349, 1096, 1294, 1427
BstV2I	GAAGAC	2 cut(s)	124, 416
BstX2I	RGATCY	1 cut(s)	1004
BstXI	CCANNNNNNTGG	2 cut(s)	504, 684
BstYI	RGATCY	1 cut(s)	1004
BstZ17I	GTATAC	1 cut(s)	572
BsuI	GTATCC	1 cut(s)	661
BsuRI	GGCC	3 cut(s)	630, 976, 1284
BtrI	CACGTC	1 cut(s)	92
BtsCI	GGATG	3 cut(s)	34, 53, 652
BtsI	GCAGTG	1 cut(s)	297
BtsIMutI	CAGTG	4 cut(s)	297, 402, 918, 1217
BveI	ACCTGC	2 cut(s)	727, 741
Cac8I	GCNNGC	3 cut(s)	984, 1089, 1248
CaiI	CAGNNNCTG	1 cut(s)	1421
CfoI	GCGC	1 cut(s)	1037
Csp6I	GTAC	2 cut(s)	476, 908
CviAII	CATG	6 cut(s)	103, 383, 680, 724, 920, 938
CviQI	GTAC	2 cut(s)	476, 908
DdeI	CTNAG	8 cut(s)	125, 332, 533, 541, 792, 900, 1134, 1351
DpnI	GATC	4 cut(s)	558, 601, 917, 1006
DpnII	GATC	4 cut(s)	556, 599, 915, 1004
DrdI	GACNNNNNNGTC	1 cut(s)	244
DseDI	GACNNNNNNGTC	1 cut(s)	244
EaeI	YGGCCR	1 cut(s)	628
Eam1104I	CTCTTC	2 cut(s)	372, 1359
EarI	CTCTTC	2 cut(s)	372, 1359
Ecl136II	GAGCTC	1 cut(s)	1121
Eco130I	CCWWGG	1 cut(s)	405
Eco24I	GRGCYC	2 cut(s)	802, 1123
Eco32I	GATATC	1 cut(s)	1164
Eco53kI	GAGCTC	1 cut(s)	1121
Eco57I	CTGAAG	2 cut(s)	359, 1233
Eco91I	GGTNACC	2 cut(s)	841, 1318
EcoICRI	GAGCTC	1 cut(s)	1121
EcoO65I	GGTNACC	2 cut(s)	841, 1318
EcoRII	CCWGG	3 cut(s)	820, 997, 1342
EcoRV	GATATC	1 cut(s)	1164
EcoT14I	CCWWGG	1 cut(s)	405
EcoT22I	ATGCAT	1 cut(s)	1030
EcoT38I	GRGCYC	2 cut(s)	802, 1123
ErhI	CCWWGG	1 cut(s)	405
FaeI	CATG	6 cut(s)	106, 386, 683, 727, 923, 941
FalI	AAGNNNNNCTT	2 cut(s)	351, 383
FaqI	GGGAC	1 cut(s)	250
FatI	CATG	6 cut(s)	102, 382, 679, 723, 919, 937
FblI	GTMKAC	1 cut(s)	571
Fnu4HI	GCNGC	6 cut(s)	108, 363, 1085, 1308, 1370, 1416
FokI	GGATG	3 cut(s)	41, 60, 659
FriOI	GRGCYC	2 cut(s)	802, 1123
Fsp4HI	GCNGC	6 cut(s)	108, 363, 1085, 1308, 1370, 1416
FspBI	CTAG	4 cut(s)	444, 641, 957, 1247
GlaI	GCGC	1 cut(s)	1036
GluI	GCNGC	6 cut(s)	108, 363, 1085, 1308, 1370, 1416
GsuI	CTGGAG	2 cut(s)	165, 1221
HaeIII	GGCC	3 cut(s)	630, 976, 1284
HhaI	GCGC	1 cut(s)	1037
Hin1II	CATG	6 cut(s)	106, 386, 683, 727, 923, 941
Hin6I	GCGC	1 cut(s)	1035
HinP1I	GCGC	1 cut(s)	1035
HindIII	AAGCTT	1 cut(s)	460
HinfI	GANTC	6 cut(s)	401, 411, 469, 531, 994, 1196
HphI	GGTGA	3 cut(s)	533, 835, 1332
Hpy166II	GTNNAC	2 cut(s)	478, 572
Hpy188I	TCNGA	8 cut(s)	11, 180, 335, 536, 579, 715, 1289, 1440
Hpy188III	TCNNGA	5 cut(s)	144, 466, 641, 899, 1062
Hpy8I	GTNNAC	2 cut(s)	478, 572
HpyAV	CCTTC	2 cut(s)	689, 937
HpyCH4III	ACNGT	5 cut(s)	397, 1069, 1101, 1221, 1431
HpyCH4IV	ACGT	1 cut(s)	91
HpyF10VI	GCNNNNNNNGC	7 cut(s)	733, 1034, 1055, 1093, 1118, 1247, 1421
HpyF3I	CTNAG	8 cut(s)	125, 332, 533, 541, 792, 900, 1134, 1351
HpySE526I	ACGT	1 cut(s)	91
Hsp92II	CATG	6 cut(s)	106, 386, 683, 727, 923, 941
HspAI	GCGC	1 cut(s)	1035
KpnI	GGTACC	1 cut(s)	911
Kzo9I	GATC	4 cut(s)	556, 599, 915, 1004
LguI	GCTCTTC	2 cut(s)	372, 1359
LmnI	GCTCC	1 cut(s)	121
Lsp1109I	GCAGC	5 cut(s)	94, 349, 1096, 1294, 1427
LweI	GCATC	5 cut(s)	38, 194, 1015, 1381, 1427
MaeI	CTAG	4 cut(s)	444, 641, 957, 1247
MaeII	ACGT	1 cut(s)	91
MaeIII	GTNAC	6 cut(s)	391, 435, 841, 952, 1318, 1355
MalI	GATC	4 cut(s)	558, 601, 917, 1006
MboI	GATC	4 cut(s)	556, 599, 915, 1004
MboII	GAAGA	8 cut(s)	78, 124, 359, 416, 596, 599, 728, 1376
MflI	RGATCY	1 cut(s)	1004
MhlI	GDGCHC	2 cut(s)	802, 1123
MlsI	TGGCCA	1 cut(s)	630
MluCI	AATT	5 cut(s)	661, 707, 757, 1265, 1299
MluNI	TGGCCA	1 cut(s)	630
MlyI	GAGTC	1 cut(s)	525
MmeI	TCCRAC	4 cut(s)	25, 211, 285, 1173
Mox20I	TGGCCA	1 cut(s)	630
Mph1103I	ATGCAT	1 cut(s)	1030
MroXI	GAANNNNTTC	1 cut(s)	853
MscI	TGGCCA	1 cut(s)	630
MseI	TTAA	6 cut(s)	260, 747, 756, 773, 884, 1256
MslI	CAYNNNNRTG	3 cut(s)	682, 848, 1278
Msp20I	TGGCCA	1 cut(s)	630
MspR9I	CCNGG	3 cut(s)	822, 999, 1344
Mva1269I	GAATGC	2 cut(s)	855, 1028
MvaI	CCWGG	3 cut(s)	822, 999, 1344
MwoI	GCNNNNNNNGC	7 cut(s)	733, 1034, 1055, 1093, 1118, 1247, 1421
NdeII	GATC	4 cut(s)	556, 599, 915, 1004
NheI	GCTAGC	1 cut(s)	1246
NlaIII	CATG	6 cut(s)	106, 386, 683, 727, 923, 941
NlaIV	GGNNCC	1 cut(s)	909
NmuCI	GTSAC	2 cut(s)	841, 952
NsiI	ATGCAT	1 cut(s)	1030
NspI	RCATGY	1 cut(s)	941
PciSI	GCTCTTC	2 cut(s)	372, 1359
PctI	GAATGC	2 cut(s)	855, 1028
PdmI	GAANNNNTTC	1 cut(s)	853
PfeI	GAWTC	5 cut(s)	401, 411, 469, 994, 1196
PflFI	GACNNNGTC	1 cut(s)	950
PflMI	CCANNNNNTGG	1 cut(s)	972
PfoI	TCCNGGA	2 cut(s)	820, 997
PkrI	GCNGC	6 cut(s)	109, 364, 1086, 1309, 1371, 1417
PleI	GAGTC	1 cut(s)	525
PpsI	GAGTC	1 cut(s)	525
Psp124BI	GAGCTC	1 cut(s)	1123
Psp6I	CCWGG	3 cut(s)	820, 997, 1342
PspEI	GGTNACC	2 cut(s)	841, 1318
PspGI	CCWGG	3 cut(s)	820, 997, 1342
PspN4I	GGNNCC	1 cut(s)	909
PstI	CTGCAG	1 cut(s)	738
PstNI	CAGNNNCTG	1 cut(s)	1421
PsuI	RGATCY	1 cut(s)	1004
PsyI	GACNNNGTC	1 cut(s)	950
RsaI	GTAC	2 cut(s)	477, 909
RsaNI	GTAC	2 cut(s)	476, 908
RseI	CAYNNNNRTG	3 cut(s)	682, 848, 1278
SacI	GAGCTC	1 cut(s)	1123
SapI	GCTCTTC	2 cut(s)	372, 1359
SaqAI	TTAA	6 cut(s)	260, 747, 756, 773, 884, 1256
SatI	GCNGC	6 cut(s)	108, 363, 1085, 1308, 1370, 1416
Sau3AI	GATC	4 cut(s)	556, 599, 915, 1004
SbfI	CCTGCAGG	1 cut(s)	738
SchI	GAGTC	1 cut(s)	525
ScrFI	CCNGG	3 cut(s)	822, 999, 1344
SdaI	CCTGCAGG	1 cut(s)	738
SduI	GDGCHC	2 cut(s)	802, 1123
SfaNI	GCATC	5 cut(s)	38, 194, 1015, 1381, 1427
SfcI	CTRYAG	1 cut(s)	734
SmiMI	CAYNNNNRTG	3 cut(s)	682, 848, 1278
SmlI	CTYRAG	2 cut(s)	52, 82
SmoI	CTYRAG	2 cut(s)	52, 82
Sse8387I	CCTGCAGG	1 cut(s)	738
Sse9I	AATT	5 cut(s)	661, 707, 757, 1265, 1299
SsiI	CCGC	2 cut(s)	217, 1370
SspI	AATATT	2 cut(s)	40, 777
SspMI	CTAG	4 cut(s)	444, 641, 957, 1247
SstI	GAGCTC	1 cut(s)	1123
StyD4I	CCNGG	3 cut(s)	820, 997, 1342
StyI	CCWWGG	1 cut(s)	405
TaaI	ACNGT	5 cut(s)	397, 1069, 1101, 1221, 1431
TaiI	ACGT	1 cut(s)	94
TaqI	TCGA	4 cut(s)	465, 876, 1117, 1262
TasI	AATT	5 cut(s)	661, 707, 757, 1265, 1299
TatI	WGTACW	1 cut(s)	475
TauI	GCSGC	1 cut(s)	1372
TfiI	GAWTC	5 cut(s)	401, 411, 469, 994, 1196
Tru1I	TTAA	6 cut(s)	260, 747, 756, 773, 884, 1256
Tru9I	TTAA	6 cut(s)	260, 747, 756, 773, 884, 1256
TscAI	CASTG	4 cut(s)	297, 402, 918, 1224
TseFI	GTSAC	2 cut(s)	841, 952
TseI	GCWGC	5 cut(s)	107, 362, 1084, 1307, 1415
Tsp45I	GTSAC	2 cut(s)	841, 952
TspDTI	ATGAA	5 cut(s)	124, 597, 696, 752, 765
TspGWI	ACGGA	1 cut(s)	410
TspRI	CASTG	4 cut(s)	297, 402, 918, 1224
Tth111I	GACNNNGTC	1 cut(s)	950
Van91I	CCANNNNNTGG	1 cut(s)	972
XapI	RAATTY	2 cut(s)	661, 707
XbaI	TCTAGA	1 cut(s)	640
XceI	RCATGY	1 cut(s)	941
XmiI	GTMKAC	1 cut(s)	571
XmnI	GAANNNNTTC	1 cut(s)	853
XspI	CTAG	4 cut(s)	444, 641, 957, 1247
Zsp2I	ATGCAT	1 cut(s)	1030

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.