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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000010324 RLG00000021423 |
| rosa_multiflora | Rmu_sc0004140.1_g000012 |
| rosa_roxburghii | Rroxscaffold_1G00007260 |
| rosa_samantha | Rh5AG237800 Rh5CG467800 Rh6DG319800 Rh7DG406600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 94 |
| AciI | CCGC | 1 cut(s) | 198 |
| AclWI | GGATC | 1 cut(s) | 218 |
| AcuI | CTGAAG | 1 cut(s) | 411 |
| AfaI | GTAC | 1 cut(s) | 433 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 395 |
| AgsI | TTSAA | 1 cut(s) | 379 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 125, 157 |
| AluBI | AGCT | 1 cut(s) | 107 |
| AluI | AGCT | 1 cut(s) | 107 |
| Alw26I | GTCTC | 3 cut(s) | 79, 239, 421 |
| AlwI | GGATC | 1 cut(s) | 218 |
| AoxI | GGCC | 1 cut(s) | 219 |
| ApeKI | GCWGC | 1 cut(s) | 359 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 175 |
| AspLEI | GCGC | 1 cut(s) | 94 |
| BbsI | GAAGAC | 1 cut(s) | 194 |
| BbvI | GCAGC | 1 cut(s) | 346 |
| BccI | CCATC | 1 cut(s) | 62 |
| BcoDI | GTCTC | 3 cut(s) | 79, 239, 421 |
| BisI | GCNGC | 1 cut(s) | 360 |
| BlsI | GCNGC | 1 cut(s) | 361 |
| BpiI | GAAGAC | 1 cut(s) | 194 |
| BsaI | GGTCTC | 1 cut(s) | 421 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 130, 160 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 395 |
| Bse1I | ACTGG | 2 cut(s) | 93, 318 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 395 |
| BseMII | CTCAG | 1 cut(s) | 74 |
| BseNI | ACTGG | 2 cut(s) | 93, 318 |
| BseRI | GAGGAG | 1 cut(s) | 151 |
| BseXI | GCAGC | 1 cut(s) | 346 |
| Bsh1236I | CGCG | 1 cut(s) | 94 |
| BshFI | GGCC | 1 cut(s) | 221 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 395 |
| BsmAI | GTCTC | 3 cut(s) | 79, 239, 421 |
| BsnI | GGCC | 1 cut(s) | 221 |
| Bso31I | GGTCTC | 1 cut(s) | 421 |
| Bsp143I | GATC | 1 cut(s) | 223 |
| BspACI | CCGC | 1 cut(s) | 198 |
| BspANI | GGCC | 1 cut(s) | 221 |
| BspCNI | CTCAG | 1 cut(s) | 75 |
| BspFNI | CGCG | 1 cut(s) | 94 |
| BspPI | GGATC | 1 cut(s) | 218 |
| BspQI | GCTCTTC | 1 cut(s) | 231 |
| BspTNI | GGTCTC | 1 cut(s) | 421 |
| BsrI | ACTGG | 2 cut(s) | 93, 318 |
| BssMI | GATC | 1 cut(s) | 223 |
| Bst4CI | ACNGT | 2 cut(s) | 431, 436 |
| Bst6I | CTCTTC | 6 cut(s) | 128, 161, 166, 231, 247, 404 |
| BstDEI | CTNAG | 2 cut(s) | 83, 443 |
| BstFNI | CGCG | 1 cut(s) | 94 |
| BstHHI | GCGC | 1 cut(s) | 94 |
| BstKTI | GATC | 1 cut(s) | 226 |
| BstMAI | GTCTC | 3 cut(s) | 79, 239, 421 |
| BstMBI | GATC | 1 cut(s) | 223 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 356 |
| BstUI | CGCG | 1 cut(s) | 94 |
| BstV1I | GCAGC | 1 cut(s) | 346 |
| BstV2I | GAAGAC | 1 cut(s) | 194 |
| BsuRI | GGCC | 1 cut(s) | 221 |
| BtsIMutI | CAGTG | 2 cut(s) | 422, 451 |
| CfoI | GCGC | 1 cut(s) | 94 |
| Csp6I | GTAC | 1 cut(s) | 432 |
| CviAII | CATG | 2 cut(s) | 44, 260 |
| CviJI | RGCY | 5 cut(s) | 32, 42, 107, 221, 359 |
| CviKI_1 | RGCY | 5 cut(s) | 32, 42, 107, 221, 359 |
| CviQI | GTAC | 1 cut(s) | 432 |
| DdeI | CTNAG | 2 cut(s) | 83, 443 |
| DpnI | GATC | 1 cut(s) | 225 |
| DpnII | GATC | 1 cut(s) | 223 |
| Eam1104I | CTCTTC | 6 cut(s) | 128, 161, 166, 231, 247, 404 |
| EarI | CTCTTC | 6 cut(s) | 128, 161, 166, 231, 247, 404 |
| Eco31I | GGTCTC | 1 cut(s) | 421 |
| Eco57I | CTGAAG | 1 cut(s) | 411 |
| FaeI | CATG | 2 cut(s) | 47, 263 |
| FaiI | YATR | 3 cut(s) | 45, 261, 287 |
| FatI | CATG | 2 cut(s) | 43, 259 |
| Fnu4HI | GCNGC | 1 cut(s) | 360 |
| Fsp4HI | GCNGC | 1 cut(s) | 360 |
| GlaI | GCGC | 1 cut(s) | 93 |
| GluI | GCNGC | 1 cut(s) | 360 |
| HaeIII | GGCC | 1 cut(s) | 221 |
| HhaI | GCGC | 1 cut(s) | 94 |
| Hin1II | CATG | 2 cut(s) | 47, 263 |
| Hin6I | GCGC | 1 cut(s) | 92 |
| HinP1I | GCGC | 1 cut(s) | 92 |
| HinfI | GANTC | 2 cut(s) | 334, 375 |
| Hpy188I | TCNGA | 5 cut(s) | 52, 84, 114, 228, 273 |
| Hpy188III | TCNNGA | 3 cut(s) | 26, 183, 379 |
| Hpy99I | CGWCG | 1 cut(s) | 334 |
| HpyCH4III | ACNGT | 2 cut(s) | 431, 436 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 356 |
| HpyF3I | CTNAG | 2 cut(s) | 83, 443 |
| Hsp92II | CATG | 2 cut(s) | 47, 263 |
| HspAI | GCGC | 1 cut(s) | 92 |
| Kzo9I | GATC | 1 cut(s) | 223 |
| LguI | GCTCTTC | 1 cut(s) | 231 |
| LpnPI | CCDG | 8 cut(s) | 74, 168, 227, 234, 299, 336, 350, 402 |
| Lsp1109I | GCAGC | 1 cut(s) | 346 |
| MaeIII | GTNAC | 1 cut(s) | 384 |
| MalI | GATC | 1 cut(s) | 225 |
| MboI | GATC | 1 cut(s) | 223 |
| MboII | GAAGA | 9 cut(s) | 14, 142, 145, 178, 183, 194, 248, 264, 421 |
| MluCI | AATT | 1 cut(s) | 274 |
| MmeI | TCCRAC | 2 cut(s) | 131, 380 |
| MroXI | GAANNNNTTC | 1 cut(s) | 175 |
| MseI | TTAA | 1 cut(s) | 438 |
| MvnI | CGCG | 1 cut(s) | 94 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 356 |
| NdeII | GATC | 1 cut(s) | 223 |
| NlaIII | CATG | 2 cut(s) | 47, 263 |
| PciSI | GCTCTTC | 1 cut(s) | 231 |
| PdmI | GAANNNNTTC | 1 cut(s) | 175 |
| PfeI | GAWTC | 2 cut(s) | 334, 375 |
| PkrI | GCNGC | 1 cut(s) | 361 |
| RsaI | GTAC | 1 cut(s) | 433 |
| RsaNI | GTAC | 1 cut(s) | 432 |
| SapI | GCTCTTC | 1 cut(s) | 231 |
| SaqAI | TTAA | 1 cut(s) | 438 |
| SatI | GCNGC | 1 cut(s) | 360 |
| Sau3AI | GATC | 1 cut(s) | 223 |
| SetI | ASST | 5 cut(s) | 109, 178, 259, 308, 391 |
| Sse9I | AATT | 1 cut(s) | 274 |
| SsiI | CCGC | 1 cut(s) | 198 |
| TaaI | ACNGT | 2 cut(s) | 431, 436 |
| TasI | AATT | 1 cut(s) | 274 |
| TfiI | GAWTC | 2 cut(s) | 334, 375 |
| Tru1I | TTAA | 1 cut(s) | 438 |
| Tru9I | TTAA | 1 cut(s) | 438 |
| TscAI | CASTG | 2 cut(s) | 429, 451 |
| TseI | GCWGC | 1 cut(s) | 359 |
| TspDTI | ATGAA | 2 cut(s) | 17, 67 |
| TspRI | CASTG | 2 cut(s) | 429, 451 |
| XmnI | GAANNNNTTC | 1 cut(s) | 175 |