Rh6DG319800

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Reverse (-)
52299422 .. 52301748
2327 bp
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UTR
Exon/CDS
Intron
Rh6DG319800.1

Sequence Viewer

Length: 164 bp
ATGTTACCAAGAGAAATGACAAGGGTTCTGCAAAGCTCTGATGCTGTTACTAGATTTATTGCCCTTGATCTGTCAACCATTGAGACAATTTTACCTTCTTCGCAGAGAGAGATCAAGAAGGATCGAGAGAGCCAGACAGGTCAAGAAGGATCGAGAGCGTGCAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

54

Amino Acids

6.08

Weight (kDa)

6.15

Isoelectric Point (pI)

75.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0019476)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 129, 157
AluBI AGCT 1 cut(s) 36
AluI AGCT 1 cut(s) 36
Alw26I GTCTC 1 cut(s) 77
AlwI GGATC 2 cut(s) 129, 157
BcoDI GTCTC 1 cut(s) 77
BfaI CTAG 1 cut(s) 51
BmsI GCATC 1 cut(s) 31
BsmAI GTCTC 1 cut(s) 77
Bsp143I GATC 4 cut(s) 67, 111, 121, 149
BspPI GGATC 2 cut(s) 129, 157
BssMI GATC 4 cut(s) 67, 111, 121, 149
BstC8I GCNNGC 1 cut(s) 160
BstKTI GATC 4 cut(s) 70, 114, 124, 152
BstMAI GTCTC 1 cut(s) 77
BstMBI GATC 4 cut(s) 67, 111, 121, 149
Cac8I GCNNGC 1 cut(s) 160
CviJI RGCY 2 cut(s) 36, 132
CviKI_1 RGCY 2 cut(s) 36, 132
DpnI GATC 4 cut(s) 69, 113, 123, 151
DpnII GATC 4 cut(s) 67, 111, 121, 149
FspBI CTAG 1 cut(s) 51
HincII GTYRAC 1 cut(s) 75
HindII GTYRAC 1 cut(s) 75
Hpy166II GTNNAC 1 cut(s) 75
Hpy188I TCNGA 1 cut(s) 40
Hpy188III TCNNGA 4 cut(s) 115, 125, 143, 153
Hpy8I GTNNAC 1 cut(s) 75
HpyAV CCTTC 3 cut(s) 105, 112, 140
HpyCH4V TGCA 2 cut(s) 31, 162
Kzo9I GATC 4 cut(s) 67, 111, 121, 149
LpnPI CCDG 2 cut(s) 123, 146
LweI GCATC 1 cut(s) 31
MaeI CTAG 1 cut(s) 51
MaeIII GTNAC 2 cut(s) 3, 46
MalI GATC 4 cut(s) 69, 113, 123, 151
MboI GATC 4 cut(s) 67, 111, 121, 149
MboII GAAGA 1 cut(s) 90
MluCI AATT 1 cut(s) 87
NdeII GATC 4 cut(s) 67, 111, 121, 149
Sau3AI GATC 4 cut(s) 67, 111, 121, 149
SetI ASST 3 cut(s) 38, 97, 142
SfaNI GCATC 1 cut(s) 31
SgeI CNNG 9 cut(s) 21, 33, 63, 77, 127, 137, 145, 150, 155
Sse9I AATT 1 cut(s) 87
SspMI CTAG 1 cut(s) 51
TaqI TCGA 2 cut(s) 124, 152
TasI AATT 1 cut(s) 87
XspI CTAG 1 cut(s) 51
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.