Rmu_sc0004140.1_g000012

Removes the phosphate from trehalose 6-phosphate to produce free trehalose

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004140.1
Physical Location & Seq
Reverse (-)
54066 .. 55887
1822 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004140.1_g000012.1.cds

Sequence Viewer

Length: 402 bp
atggtggtggaggatgtggagattgactgtggtggtgaggtttcaacgagggagtttaggaggcgtttgagatttagaagagacaatctctgttatgctggaagccacggcttcgatatattgaccccatcaccctcttcaaaatatagtaaccataagcatcaatctagaaccactgatggaaaaggggagaggtctggactggaaacaaagaaaacgacaaatcttggtattattgctggtgtggctgctctggtttttggattcaagaagttacctgaagtgggtctcatcactgaacgggatgaaatgtatgaactcaagaattggtttggaatttcccatctgaagaacaatgcatttatggtgtggaaagttttgaacttggaatctgttaactaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

133

Amino Acids

15.09

Weight (kDa)

8.95

Isoelectric Point (pI)

45.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0019476)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 336
AcuI CTGAAG 2 cut(s) 300, 368
AfiI CCNNNNNNNGG 1 cut(s) 284
AgsI TTSAA 4 cut(s) 45, 141, 268, 382
Alw26I GTCTC 2 cut(s) 75, 293
ApeKI GCWGC 1 cut(s) 248
ApoI RAATTY 1 cut(s) 336
AsuHPI GGTGA 2 cut(s) 47, 123
BbvI GCAGC 1 cut(s) 235
BccI CCATC 3 cut(s) 136, 173, 351
BceAI ACGGC 1 cut(s) 124
BcoDI GTCTC 2 cut(s) 75, 293
BfaI CTAG 1 cut(s) 168
BisI GCNGC 1 cut(s) 249
BlsI GCNGC 1 cut(s) 250
BmsI GCATC 1 cut(s) 169
BplI GAGNNNNNCTC 2 cut(s) 72, 104
BpuEI CTTGAG 1 cut(s) 305
BsaI GGTCTC 1 cut(s) 293
BsaJI CCNNGG 1 cut(s) 106
Bsc4I CCNNNNNNNGG 1 cut(s) 284
Bse1I ACTGG 1 cut(s) 207
BseDI CCNNGG 1 cut(s) 106
BseGI GGATG 2 cut(s) 19, 310
BseLI CCNNNNNNNGG 1 cut(s) 284
BseNI ACTGG 1 cut(s) 207
BseXI GCAGC 1 cut(s) 235
BslI CCNNNNNNNGG 1 cut(s) 284
BsmAI GTCTC 2 cut(s) 75, 293
Bso31I GGTCTC 1 cut(s) 293
BspTNI GGTCTC 1 cut(s) 293
BsrI ACTGG 1 cut(s) 207
BssECI CCNNGG 1 cut(s) 106
Bst4CI ACNGT 1 cut(s) 29
Bst6I CTCTTC 2 cut(s) 73, 142
BstDSI CCRYGG 1 cut(s) 106
BstF5I GGATG 2 cut(s) 19, 310
BstMAI GTCTC 2 cut(s) 75, 293
BstMWI GCNNNNNNNGC 1 cut(s) 245
BstV1I GCAGC 1 cut(s) 235
BtgI CCRYGG 1 cut(s) 106
BtsCI GGATG 2 cut(s) 19, 310
BtsIMutI CAGTG 2 cut(s) 174, 294
CviJI RGCY 3 cut(s) 105, 111, 248
CviKI_1 RGCY 3 cut(s) 105, 111, 248
Eam1104I CTCTTC 2 cut(s) 73, 142
EarI CTCTTC 2 cut(s) 73, 142
Eco31I GGTCTC 1 cut(s) 293
Eco57I CTGAAG 2 cut(s) 300, 368
EcoT22I ATGCAT 1 cut(s) 361
FaiI YATR 6 cut(s) 96, 119, 147, 156, 315, 365
Fnu4HI GCNGC 1 cut(s) 249
FokI GGATG 2 cut(s) 26, 317
Fsp4HI GCNGC 1 cut(s) 249
FspBI CTAG 1 cut(s) 168
GluI GCNGC 1 cut(s) 249
HincII GTYRAC 1 cut(s) 397
HindII GTYRAC 1 cut(s) 397
HinfI GANTC 2 cut(s) 264, 389
HpaI GTTAAC 1 cut(s) 397
HphI GGTGA 2 cut(s) 47, 123
Hpy166II GTNNAC 1 cut(s) 397
Hpy188I TCNGA 1 cut(s) 348
Hpy188III TCNNGA 4 cut(s) 168, 198, 268, 322
Hpy8I GTNNAC 1 cut(s) 397
HpyCH4III ACNGT 1 cut(s) 29
HpyCH4V TGCA 1 cut(s) 359
HpyF10VI GCNNNNNNNGC 1 cut(s) 245
KspAI GTTAAC 1 cut(s) 397
LpnPI CCDG 6 cut(s) 84, 183, 188, 225, 239, 291
Lsp1109I GCAGC 1 cut(s) 235
LweI GCATC 1 cut(s) 169
MaeI CTAG 1 cut(s) 168
MaeIII GTNAC 2 cut(s) 149, 273
MboII GAAGA 3 cut(s) 90, 129, 361
MluCI AATT 2 cut(s) 325, 336
MnlI CCTC 6 cut(s) 4, 31, 42, 54, 145, 186
Mph1103I ATGCAT 1 cut(s) 361
MseI TTAA 1 cut(s) 396
MwoI GCNNNNNNNGC 1 cut(s) 245
NsiI ATGCAT 1 cut(s) 361
PfeI GAWTC 2 cut(s) 264, 389
PkrI GCNGC 1 cut(s) 250
SaqAI TTAA 1 cut(s) 396
SatI GCNGC 1 cut(s) 249
SetI ASST 3 cut(s) 42, 197, 280
SfaNI GCATC 1 cut(s) 169
SmlI CTYRAG 1 cut(s) 320
SmoI CTYRAG 1 cut(s) 320
Sse9I AATT 2 cut(s) 325, 336
SspMI CTAG 1 cut(s) 168
TaaI ACNGT 1 cut(s) 29
TaqI TCGA 1 cut(s) 114
TasI AATT 2 cut(s) 325, 336
TfiI GAWTC 2 cut(s) 264, 389
Tru1I TTAA 1 cut(s) 396
Tru9I TTAA 1 cut(s) 396
TscAI CASTG 2 cut(s) 181, 301
TseI GCWGC 1 cut(s) 248
TspDTI ATGAA 2 cut(s) 321, 330
TspRI CASTG 2 cut(s) 181, 301
XapI RAATTY 1 cut(s) 336
XbaI TCTAGA 1 cut(s) 167
XspI CTAG 1 cut(s) 168
Zsp2I ATGCAT 1 cut(s) 361
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.