RLG00000022340

isoform X1

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
82684590 .. 82689561
4972 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022340

Sequence Viewer

Length: 3369 bp
ATGGCCTTACTTGCCAAGGGTTTGTTCATCAGGTTTCTTCAGCTCTATCTGTATGCTTTCATTATAGGGTACATTCAAATCTTAGCGGAGTCAACCGTACTCATTCGCTTCGATAGAGCTCCACCGGCACGGTCAAGGTACTCTTACGCTGTTTTCCGGTACTCAGTTGTTACACTTAATGGCTCAGATGCATGCAGAGAAAGAATGTGTTTCATTCACTGTCAGCTTGATGGCCAAACTCTGAGTCCATGTCCAGCTAAGGCCACAGTATTCAGAAACTTGACAGTCAACAGTGACCATGAATTTCTTGTCAGTGTCACAACTTCGGATGGACAAAGAAACTCATCAGCTCATTCTTGGTTCATTGATACAATACCGCCAACTGCAACAATTTTTAGCGGAAAGAATTATACAAGCGCTGAAAGAATAGCCATTGATATCACTTTCAGTGAAGCTTGCACCGGGAATGGTGGCTTTAGGTGTGTAAACTCATCAAGCTGTGATGTTATAATACATGGCCCAGCCCATGTACATGCATCTTCCTTGCGCATGATTAAACCTGGCATTAGTTACAGTTTCGATCTAATTCTCTCCTTTACAAGTATGAATGGTCGCGTTGTCATCAGAATGGCAGATAAATTTTGTACAGATCAGGCTGGAAATAGCTTCACAAGGACAAATGGTTCCACTATAATCATTCACTTTGATAGAAGGCCAGTGCTAGCAGATTTGTGGACCTCTGTTCCTGCCTATGAGTTAGTGATAGATGGAGTCCCAAGAACTGTCCTTGCAACTAACAAATTGGAGTATGTGCAAATATTTGTGGGCTTCAGCATTCCCATTATAAACACAACAGAGCAGGTCCTAAATGCAATGATTGTCAATTCGGGTAAATTAATACCAATTCATCGCAGAAATCAAGGAAGCCGCCAGTTTAATTTCCAAATCAGGAATACATCTAGAACTGAAATCATTGTCATTGAATTACAAGCTGGACTATTAATCGGCAGGACAGGCGCTCCTGTCTCACCTGTTCCCTCAATTACATTCCTTTATGATTCTGTGGACACCGGTGTAGGGCTGAGTACTGGTTCTCCAAATGTTACTAAGGACCACAGCATAAATGTAGTAGTTGAGTTTACAAAGCCGGTTTTTGGCTTTGAGGCCTCAATGGTAAATGTGGTCGGGGGTAGAATAACAAGGTTTAGGGAACTTTCAAGAGCTCTGTACTCCTTGAATGTACAAGCAATCACTGAGCATATGGTGTCAATTTCTGTTCCTGCAGGGAAGGTATATGATATATCAGGAAATCTTAACATGGCATCTAACCAACTTGAAGTGAAACACTACTCAACCCCTGCAATATCAATGGCATTGCAGTCATTTGTTAGTGCTGGTATATTAGCAACATCACTAGCAGCTGCTATTCTCTCAATTTCAACTGCACATCTTGGAGCAGTGGGAATTGCTTCTGAGAGAATCAACGTTGTTGCCTCCGATTCCTCAATGAATCTACATGGTCTGGTCGGACACCTTCAAGTTTTTGTCCTCTCAGACTGGTTCTCAGTTAATCAACCAATTGAATATTTTGAGACAACCAAAGGTCTTTGGTGGCTCATACCTCATCAAAAGCTTCCATGGAAGAAGGATAGTGGTTCAGTTTTGCACCACCATGTCTACTTGGCTGAAGAGAATCTTCAGAGGAAATCTACTGCCTCATCTGTAGGAGGGTCTTCACATAAAGGGTTCAACGTTCAAGTTGACTCGTATCTAGCCAATTCTTCATATATGTGCAATGAAGTACCAGTTCCCATCGAGATGGGTCCCAAGTCTGGTTGGCTTCTTGAGCAGCATAACATGCATATGACTCCTTATGGATTACCCCTTCATTCTAATGAATATTTCATGTATTTCTTGAGAGGAGAGCCATTGTCTGCTAGCAATGTCATCAAGGGAATGGAGAATTACCTAGGGTGGGAAGACCTACTGATGAACTTGTTTTGGCTTGGTATTGGAGGAGGCAGTTTATTAATCATCCATTTATTGATATTACTTTTCCTAAGACGGAGAACTGGAACACCAGCTCATGGTTTACTGTCAGTTCCCAGATTCGAGCTCTTTCTTCTAATTCTCATGCTACCTTGTATCTCTCAGTCCTCAACTTTTGTTATAAAAGGTGGTACAACAGGAGGAATCATTACTGGAGCTTTGTTGCTGGCTATCCCAGCAGCTCTTATAATATCAGTGTGTCTTTTTAATTTAATTGCAATCTTCTCTGGCAGTTATGTTCAGTACAAGGAAGTCAAGCATGTAGCTAGAAAAGAACCGTGGTCTACAAGGTTTTGGTATTATTTCACAGGGAGACCTAGTGCTGGAAAGTGGTTTTATAAGGAAGGGATTCCTTCATCTTTCCTTCCACGTTTCGGGATTCTCTTTGAAAGTTTGAAGGGTCCTCCATTATTTGTGTTTGTTGATCAAAATGAACCAAACAGCATATCCAAGTGGACCGGAAGTGGCAATAATGGTATTGGGAGGATGCGACCAGTCAGCTTGGATGGCAGCATTGAAGAAATTAAGATTCCTATATCGAAAAGGGTCTTGGGATGTGCTAGATCTTCCTACATTATTGTTGATCTTTCAAGACGGGTCTGCTTGGGGATCATATGTGGAGCTTACTCATCAAGGAAATCACACCAAAGCCTCTTTGCACTGACCGTTACGCTGGTACAGTTCATTTATCTATTTACTATCAAACCATATATCAGCAGGGGAGTCCATGTGGTGGAAAGTATTTCTCTACTGTGTGAGGTTGGCATCTTTGCTCTATTTGTCAGTATTAATGGCTCAAATCCAGTCAAAGCGAGAAATGCAGGGTTCTTAATGCTAGGTCTTCTCTTTCTTACCTTTGTTACCCAAATTATCAATGAGTGGTATGCTTTGATGAAGTTCATATTAAGATTCTCTCAGCCTCAAAAGAATTCGTTCAAACTTGGTTTAAAGTTTGCTGCTAAGGGCCTTATCCTCCCATTCCTTCCAAAGAAGCAATGGCCAAGAGTCATACCTGCATCATCCCATCCGAAAACAGGTCTACCTCCAGTCCTTCCTCCAGGTCCAGATACAAAATCTGCAACTGTAGTCCCTGTACTCAGTCCTGGATCACCTGGCCCTAATGTTCTACAAATGACAGCAGGTTCCTCTACTTCCGAGACTACACTAGGTATGCAGAGAGCAGTGGAAGCAAAACAGCTAAAGGGACTGAAATTAGAGCAGAAAAGTGATCTGAAGAAACTGAGGGAGTTGGCAAGGGCAAGTTTTTCAGGGGATTCAAATTTCGAGGGAGCTAGCACCAGCTATGGTCCTAAACCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1123

Amino Acids

123.36

Weight (kDa)

9.45

Isoelectric Point (pI)

37.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 5 cut(s) 509, 845, 2171, 2237, 2388
Acc16I TGCGCA 1 cut(s) 548
Acc36I ACCTGC 3 cut(s) 850, 3070, 3179
AccB7I CCANNNNNTGG 2 cut(s) 2087, 2782
AccI GTMKAC 3 cut(s) 1677, 2333, 3088
AccII CGCG 1 cut(s) 615
AciI CCGC 4 cut(s) 86, 377, 399, 928
AclI AACGTT 2 cut(s) 1485, 1752
AclWI GGATC 2 cut(s) 2666, 3163
AcoI YGGCCR 2 cut(s) 232, 3047
AcsI RAATTY 4 cut(s) 302, 638, 2977, 3328
AcuI CTGAAG 5 cut(s) 23, 814, 1682, 1707, 3302
AfeI AGCGCT 1 cut(s) 418
AfiI CCNNNNNNNGG 9 cut(s) 1077, 1154, 1832, 1975, 2087, 2372, 2423, 2782, 3083
AgeI ACCGGT 1 cut(s) 1070
AjnI CCWGG 4 cut(s) 559, 3106, 3151, 3160
AjuI GAANNNNNNNTTGG 4 cut(s) 8, 40, 2582, 2614
AloI GAACNNNNNNTCC 2 cut(s) 667, 699
Alw21I GWGCWC 3 cut(s) 121, 1225, 2118
Alw26I GTCTC 4 cut(s) 1030, 1586, 2356, 3200
AlwI GGATC 2 cut(s) 2666, 3163
Aor51HI AGCGCT 1 cut(s) 418
AoxI GGCC 9 cut(s) 3, 232, 261, 517, 713, 1164, 3013, 3047, 3163
ApeKI GCWGC 6 cut(s) 1418, 1421, 1849, 2228, 2559, 3005
ApoI RAATTY 4 cut(s) 302, 638, 2977, 3328
ArsI GACNNNNNNTTYG 2 cut(s) 229, 261
AseI ATTAAT 4 cut(s) 896, 1001, 2030, 2838
AsiGI ACCGGT 1 cut(s) 1070
Asp700I GAANNNNTTC 3 cut(s) 1468, 2397, 2981
AspA2I CCTAGG 1 cut(s) 1969
AspLEI GCGC 3 cut(s) 419, 549, 1019
AsuC2I CCSGG 1 cut(s) 463
AsuHPI GGTGA 2 cut(s) 1020, 3150
AsuNHI GCTAGC 3 cut(s) 721, 1937, 3341
AvaII GGWCC 8 cut(s) 735, 862, 1111, 1823, 2450, 2505, 3110, 3356
AvrII CCTAGG 1 cut(s) 1969
BalI TGGCCA 2 cut(s) 234, 3049
BanII GRGCYC 3 cut(s) 121, 1225, 2118
BbsI GAAGAC 3 cut(s) 1725, 1986, 2882
Bbv12I GWGCWC 3 cut(s) 121, 1225, 2118
BbvI GCAGC 6 cut(s) 1408, 1430, 1861, 2240, 2571, 2992
BccI CCATC 7 cut(s) 224, 323, 761, 1813, 1820, 2549, 3081
BciT130I CCWGG 4 cut(s) 561, 3108, 3153, 3162
BclI TGATCA 1 cut(s) 2473
BcnI CCSGG 1 cut(s) 463
BcoDI GTCTC 4 cut(s) 1030, 1586, 2356, 3200
BfmI CTRYAG 3 cut(s) 1281, 1722, 3132
BfoI RGCGCY 2 cut(s) 420, 1020
BfuAI ACCTGC 3 cut(s) 850, 3070, 3179
BglII AGATCT 1 cut(s) 2612
BisI GCNGC 7 cut(s) 928, 1419, 1422, 1850, 2229, 2560, 3006
BlnI CCTAGG 1 cut(s) 1969
BlsI GCNGC 7 cut(s) 929, 1420, 1423, 1851, 2230, 2561, 3007
BmcAI AGTACT 1 cut(s) 1087
Bme1390I CCNGG 5 cut(s) 463, 561, 3108, 3153, 3162
Bme18I GGWCC 8 cut(s) 735, 862, 1111, 1823, 2450, 2505, 3110, 3356
BmiI GGNNCC 5 cut(s) 685, 1824, 1825, 2451, 3193
BmrFI CCNGG 5 cut(s) 463, 561, 3108, 3153, 3162
BmsI GCATC 6 cut(s) 178, 545, 1331, 2526, 2823, 3074
BmtI GCTAGC 3 cut(s) 725, 1941, 3345
BpiI GAAGAC 3 cut(s) 1725, 1986, 2882
BpmI CTGGAG 3 cut(s) 2223, 3078, 3090
Bpu10I CCTNAGC 2 cut(s) 258, 3009
BpuEI CTTGAG 2 cut(s) 1865, 1936
BpuMI CCSGG 1 cut(s) 463
BsaI GGTCTC 1 cut(s) 2356
BsaJI CCNNGG 4 cut(s) 15, 1637, 1969, 2327
BsaWI WCCGGW 3 cut(s) 156, 1070, 2507
BsaXI ACNNNNNCTCC 8 cut(s) 1003, 1033, 1078, 1108, 2353, 2383, 2763, 2793
Bsc4I CCNNNNNNNGG 9 cut(s) 1077, 1154, 1832, 1975, 2087, 2372, 2423, 2782, 3083
Bse118I RCCGGY 3 cut(s) 124, 1070, 1147
Bse3DI GCAATG 5 cut(s) 879, 1373, 1801, 1948, 3050
BseBI CCWGG 4 cut(s) 561, 3108, 3153, 3162
BseDI CCNNGG 4 cut(s) 15, 1637, 1969, 2327
BseGI GGATG 7 cut(s) 334, 2034, 2541, 2560, 2609, 3068, 3073
BseLI CCNNNNNNNGG 9 cut(s) 1077, 1154, 1832, 1975, 2087, 2372, 2423, 2782, 3083
BseMI GCAATG 5 cut(s) 879, 1373, 1801, 1948, 3050
BseRI GAGGAG 2 cut(s) 1935, 2031
BseXI GCAGC 6 cut(s) 1408, 1430, 1861, 2240, 2571, 2992
BseYI CCCAGC 2 cut(s) 520, 2224
BsgI GTGCAG 1 cut(s) 1428
Bsh1236I CGCG 1 cut(s) 615
BshFI GGCC 9 cut(s) 5, 234, 263, 519, 715, 1166, 3015, 3049, 3165
BshTI ACCGGT 1 cut(s) 1070
BsiHKAI GWGCWC 3 cut(s) 121, 1225, 2118
BsiSI CCGG 6 cut(s) 125, 157, 462, 1071, 1148, 2508
BslFI GGGAC 4 cut(s) 758, 1809, 3122, 3267
BslI CCNNNNNNNGG 9 cut(s) 1077, 1154, 1832, 1975, 2087, 2372, 2423, 2782, 3083
BsmAI GTCTC 4 cut(s) 1030, 1586, 2356, 3200
BsmFI GGGAC 4 cut(s) 758, 1809, 3122, 3267
BsmI GAATGC 1 cut(s) 834
BsnI GGCC 9 cut(s) 5, 234, 263, 519, 715, 1166, 3015, 3049, 3165
Bso31I GGTCTC 1 cut(s) 2356
Bsp1286I GDGCHC 3 cut(s) 121, 1225, 2118
Bsp1407I TGTACA 3 cut(s) 529, 644, 1240
Bsp143I GATC 8 cut(s) 580, 649, 2473, 2612, 2632, 2658, 3155, 3277
Bsp19I CCATGG 1 cut(s) 1637
BspACI CCGC 4 cut(s) 86, 377, 399, 928
BspANI GGCC 9 cut(s) 5, 234, 263, 519, 715, 1166, 3015, 3049, 3165
BspFNI CGCG 1 cut(s) 615
BspLI GGNNCC 5 cut(s) 685, 1824, 1825, 2451, 3193
BspMAI CTGCAG 1 cut(s) 1285
BspMI ACCTGC 3 cut(s) 850, 3070, 3179
BspOI GCTAGC 3 cut(s) 725, 1941, 3345
BspPI GGATC 2 cut(s) 2666, 3163
BspTNI GGTCTC 1 cut(s) 2356
BsrDI GCAATG 5 cut(s) 879, 1373, 1801, 1948, 3050
BsrFI RCCGGY 3 cut(s) 124, 1070, 1147
BsrGI TGTACA 3 cut(s) 529, 644, 1240
BssAI RCCGGY 3 cut(s) 124, 1070, 1147
BssECI CCNNGG 4 cut(s) 15, 1637, 1969, 2327
BssMI GATC 8 cut(s) 580, 649, 2473, 2612, 2632, 2658, 3155, 3277
BssT1I CCWWGG 3 cut(s) 15, 1637, 1969
Bst2UI CCWGG 4 cut(s) 561, 3108, 3153, 3162
Bst6I CTCTTC 1 cut(s) 1683
BstAPI GCANNNNNTGC 1 cut(s) 1858
BstAUI TGTACA 3 cut(s) 529, 644, 1240
BstC8I GCNNGC 6 cut(s) 193, 457, 723, 1939, 2217, 3343
BstDSI CCRYGG 2 cut(s) 1637, 2327
BstF5I GGATG 7 cut(s) 334, 2034, 2541, 2560, 2609, 3068, 3073
BstFNI CGCG 1 cut(s) 615
BstH2I RGCGCY 2 cut(s) 420, 1020
BstHHI GCGC 3 cut(s) 419, 549, 1019
BstKTI GATC 8 cut(s) 583, 652, 2476, 2615, 2635, 2661, 3158, 3280
BstMAI GTCTC 4 cut(s) 1030, 1586, 2356, 3200
BstMBI GATC 8 cut(s) 580, 649, 2473, 2612, 2632, 2658, 3155, 3277
BstMWI GCNNNNNNNGC 9 cut(s) 11, 125, 1014, 1846, 1858, 2225, 2556, 2867, 3236
BstNI CCWGG 4 cut(s) 561, 3108, 3153, 3162
BstNSI RCATGY 4 cut(s) 195, 536, 1861, 2312
BstSCI CCNGG 5 cut(s) 461, 559, 3106, 3151, 3160
BstSFI CTRYAG 3 cut(s) 1281, 1722, 3132
BstUI CGCG 1 cut(s) 615
BstV1I GCAGC 6 cut(s) 1408, 1430, 1861, 2240, 2571, 2992
BstV2I GAAGAC 3 cut(s) 1725, 1986, 2882
BstX2I RGATCY 1 cut(s) 2612
BstXI CCANNNNNNTGG 1 cut(s) 1819
BstYI RGATCY 1 cut(s) 2612
BsuRI GGCC 9 cut(s) 5, 234, 263, 519, 715, 1166, 3015, 3049, 3165
BtgI CCRYGG 2 cut(s) 1637, 2327
BtgZI GCGATG 1 cut(s) 893
BtsCI GGATG 7 cut(s) 334, 2034, 2541, 2560, 2609, 3068, 3073
BtsI GCAGTG 2 cut(s) 1464, 3237
BveI ACCTGC 3 cut(s) 850, 3070, 3179
Cac8I GCNNGC 6 cut(s) 193, 457, 723, 1939, 2217, 3343
CfoI GCGC 3 cut(s) 419, 549, 1019
Cfr10I RCCGGY 3 cut(s) 124, 1070, 1147
CspAI ACCGGT 1 cut(s) 1070
DpnI GATC 8 cut(s) 582, 651, 2475, 2614, 2634, 2660, 3157, 3279
DpnII GATC 8 cut(s) 580, 649, 2473, 2612, 2632, 2658, 3155, 3277
DraI TTTAAA 1 cut(s) 2997
EaeI YGGCCR 2 cut(s) 232, 3047
Eam1104I CTCTTC 1 cut(s) 1683
EarI CTCTTC 1 cut(s) 1683
Ecl136II GAGCTC 3 cut(s) 119, 1223, 2116
Eco130I CCWWGG 3 cut(s) 15, 1637, 1969
Eco147I AGGCCT 1 cut(s) 1166
Eco24I GRGCYC 3 cut(s) 121, 1225, 2118
Eco31I GGTCTC 1 cut(s) 2356
Eco32I GATATC 1 cut(s) 439
Eco47I GGWCC 8 cut(s) 735, 862, 1111, 1823, 2450, 2505, 3110, 3356
Eco47III AGCGCT 1 cut(s) 418
Eco53kI GAGCTC 3 cut(s) 119, 1223, 2116
Eco57I CTGAAG 5 cut(s) 23, 814, 1682, 1707, 3302
EcoICRI GAGCTC 3 cut(s) 119, 1223, 2116
EcoO109I RGGNCCY 4 cut(s) 862, 1823, 2450, 3013
EcoRI GAATTC 1 cut(s) 2977
EcoRII CCWGG 4 cut(s) 559, 3106, 3151, 3160
EcoRV GATATC 1 cut(s) 439
EcoT14I CCWWGG 3 cut(s) 15, 1637, 1969
EcoT22I ATGCAT 3 cut(s) 193, 538, 1863
EcoT38I GRGCYC 3 cut(s) 121, 1225, 2118
ErhI CCWWGG 3 cut(s) 15, 1637, 1969
FalI AAGNNNNNCTT 4 cut(s) 127, 159, 1680, 1712
FaqI GGGAC 4 cut(s) 758, 1809, 3122, 3267
FauNDI CATATG 3 cut(s) 1260, 1863, 2663
FbaI TGATCA 1 cut(s) 2473
FblI GTMKAC 3 cut(s) 1677, 2333, 3088
Fnu4HI GCNGC 7 cut(s) 928, 1419, 1422, 1850, 2229, 2560, 3006
FokI GGATG 7 cut(s) 341, 2021, 2548, 2567, 2616, 3055, 3060
FriOI GRGCYC 3 cut(s) 121, 1225, 2118
Fsp4HI GCNGC 7 cut(s) 928, 1419, 1422, 1850, 2229, 2560, 3006
FspI TGCGCA 1 cut(s) 548
GlaI GCGC 3 cut(s) 418, 548, 1018
GluI GCNGC 7 cut(s) 928, 1419, 1422, 1850, 2229, 2560, 3006
GsaI CCCAGC 2 cut(s) 524, 2228
GsuI CTGGAG 3 cut(s) 2223, 3078, 3090
HaeII RGCGCY 2 cut(s) 420, 1020
HaeIII GGCC 9 cut(s) 5, 234, 263, 519, 715, 1166, 3015, 3049, 3165
HapII CCGG 6 cut(s) 125, 157, 462, 1071, 1148, 2508
HhaI GCGC 3 cut(s) 419, 549, 1019
Hin6I GCGC 3 cut(s) 417, 547, 1017
HinP1I GCGC 3 cut(s) 417, 547, 1017
HincII GTYRAC 3 cut(s) 93, 289, 1762
HindII GTYRAC 3 cut(s) 93, 289, 1762
HindIII AAGCTT 2 cut(s) 453, 1631
HpaII CCGG 6 cut(s) 125, 157, 462, 1071, 1148, 2508
HphI GGTGA 2 cut(s) 1020, 3150
HpyCH4IV ACGT 3 cut(s) 1485, 1752, 2419
HpyF10VI GCNNNNNNNGC 9 cut(s) 11, 125, 1014, 1846, 1858, 2225, 2556, 2867, 3236
HpySE526I ACGT 3 cut(s) 1485, 1752, 2419
HspAI GCGC 3 cut(s) 417, 547, 1017
KflI GGGWCCC 1 cut(s) 1823
Ksp22I TGATCA 1 cut(s) 2473
Kzo9I GATC 8 cut(s) 580, 649, 2473, 2612, 2632, 2658, 3155, 3277
LmnI GCTCC 6 cut(s) 124, 1024, 1454, 2204, 2669, 3338
Lsp1109I GCAGC 6 cut(s) 1408, 1430, 1861, 2240, 2571, 2992
LweI GCATC 6 cut(s) 178, 545, 1331, 2526, 2823, 3074
MaeII ACGT 3 cut(s) 1485, 1752, 2419
MaeIII GTNAC 7 cut(s) 169, 293, 316, 569, 1102, 2716, 2908
MalI GATC 8 cut(s) 582, 651, 2475, 2614, 2634, 2660, 3157, 3279
MboI GATC 8 cut(s) 580, 649, 2473, 2612, 2632, 2658, 3155, 3277
MfeI CAATTG 1 cut(s) 1578
MflI RGATCY 1 cut(s) 2612
MhlI GDGCHC 3 cut(s) 121, 1225, 2118
MlsI TGGCCA 2 cut(s) 234, 3049
MluNI TGGCCA 2 cut(s) 234, 3049
MlyI GAGTC 7 cut(s) 98, 253, 780, 1757, 1861, 2781, 3063
MmeI TCCRAC 1 cut(s) 1507
Mox20I TGGCCA 2 cut(s) 234, 3049
Mph1103I ATGCAT 3 cut(s) 193, 538, 1863
MroXI GAANNNNTTC 3 cut(s) 1468, 2397, 2981
MscI TGGCCA 2 cut(s) 234, 3049
MslI CAYNNNNRTG 7 cut(s) 531, 626, 1671, 1789, 1817, 1862, 1893
Msp20I TGGCCA 2 cut(s) 234, 3049
MspA1I CMGCKG 1 cut(s) 1421
MspI CCGG 6 cut(s) 125, 157, 462, 1071, 1148, 2508
MspR9I CCNGG 5 cut(s) 463, 561, 3108, 3153, 3162
MunI CAATTG 1 cut(s) 1578
Mva1269I GAATGC 1 cut(s) 834
MvaI CCWGG 4 cut(s) 561, 3108, 3153, 3162
MvnI CGCG 1 cut(s) 615
MwoI GCNNNNNNNGC 9 cut(s) 11, 125, 1014, 1846, 1858, 2225, 2556, 2867, 3236
NciI CCSGG 1 cut(s) 463
NcoI CCATGG 1 cut(s) 1637
NdeI CATATG 3 cut(s) 1260, 1863, 2663
NdeII GATC 8 cut(s) 580, 649, 2473, 2612, 2632, 2658, 3155, 3277
NheI GCTAGC 3 cut(s) 721, 1937, 3341
NlaIV GGNNCC 5 cut(s) 685, 1824, 1825, 2451, 3193
NmuCI GTSAC 2 cut(s) 293, 316
NsbI TGCGCA 1 cut(s) 548
NsiI ATGCAT 3 cut(s) 193, 538, 1863
NspI RCATGY 4 cut(s) 195, 536, 1861, 2312
PaeI GCATGC 1 cut(s) 195
PceI AGGCCT 1 cut(s) 1166
PctI GAATGC 1 cut(s) 834
PdmI GAANNNNTTC 3 cut(s) 1468, 2397, 2981
PflMI CCANNNNNTGG 2 cut(s) 2087, 2782
PfoI TCCNGGA 1 cut(s) 3151
PinAI ACCGGT 1 cut(s) 1070
PkrI GCNGC 7 cut(s) 929, 1420, 1423, 1851, 2230, 2561, 3007
PleI GAGTC 7 cut(s) 97, 252, 779, 1757, 1861, 2780, 3062
PpsI GAGTC 7 cut(s) 97, 252, 779, 1757, 1861, 2780, 3062
PpuMI RGGWCCY 3 cut(s) 862, 1823, 2450
PshBI ATTAAT 4 cut(s) 896, 1001, 2030, 2838
PsiI TTATAA 5 cut(s) 509, 845, 2171, 2237, 2388
Psp124BI GAGCTC 3 cut(s) 121, 1225, 2118
Psp1406I AACGTT 2 cut(s) 1485, 1752
Psp5II RGGWCCY 3 cut(s) 862, 1823, 2450
Psp6I CCWGG 4 cut(s) 559, 3106, 3151, 3160
PspFI CCCAGC 2 cut(s) 520, 2224
PspGI CCWGG 4 cut(s) 559, 3106, 3151, 3160
PspN4I GGNNCC 5 cut(s) 685, 1824, 1825, 2451, 3193
PspPPI RGGWCCY 3 cut(s) 862, 1823, 2450
PstI CTGCAG 1 cut(s) 1285
PsuI RGATCY 1 cut(s) 2612
PvuII CAGCTG 1 cut(s) 1421
RseI CAYNNNNRTG 7 cut(s) 531, 626, 1671, 1789, 1817, 1862, 1893
SacI GAGCTC 3 cut(s) 121, 1225, 2118
SatI GCNGC 7 cut(s) 928, 1419, 1422, 1850, 2229, 2560, 3006
Sau3AI GATC 8 cut(s) 580, 649, 2473, 2612, 2632, 2658, 3155, 3277
SbfI CCTGCAGG 1 cut(s) 1285
ScaI AGTACT 1 cut(s) 1087
SchI GAGTC 7 cut(s) 98, 253, 780, 1757, 1861, 2781, 3063
ScrFI CCNGG 5 cut(s) 463, 561, 3108, 3153, 3162
SdaI CCTGCAGG 1 cut(s) 1285
SduI GDGCHC 3 cut(s) 121, 1225, 2118
SfaNI GCATC 6 cut(s) 178, 545, 1331, 2526, 2823, 3074
SfcI CTRYAG 3 cut(s) 1281, 1722, 3132
SgrAI CRCCGGYG 1 cut(s) 1070
SinI GGWCC 8 cut(s) 735, 862, 1111, 1823, 2450, 2505, 3110, 3356
SmiMI CAYNNNNRTG 7 cut(s) 531, 626, 1671, 1789, 1817, 1862, 1893
SmlI CTYRAG 2 cut(s) 1844, 1915
SmoI CTYRAG 2 cut(s) 1844, 1915
SphI GCATGC 1 cut(s) 195
Sse8387I CCTGCAGG 1 cut(s) 1285
SseBI AGGCCT 1 cut(s) 1166
SsiI CCGC 4 cut(s) 86, 377, 399, 928
SspI AATATT 3 cut(s) 819, 1586, 1901
SstI GAGCTC 3 cut(s) 121, 1225, 2118
StuI AGGCCT 1 cut(s) 1166
StyD4I CCNGG 5 cut(s) 461, 559, 3106, 3151, 3160
StyI CCWWGG 3 cut(s) 15, 1637, 1969
TaiI ACGT 3 cut(s) 1488, 1755, 2422
TaqI TCGA 6 cut(s) 111, 579, 1815, 2112, 2588, 3333
TatI WGTACW 7 cut(s) 529, 644, 1085, 1227, 1240, 2292, 3142
TauI GCSGC 1 cut(s) 930
TseFI GTSAC 2 cut(s) 293, 316
TseI GCWGC 6 cut(s) 1418, 1421, 1849, 2228, 2559, 3005
Tsp45I GTSAC 2 cut(s) 293, 316
TspGWI ACGGA 1 cut(s) 2080
Van91I CCANNNNNTGG 2 cut(s) 2087, 2782
VpaK11BI GGWCC 8 cut(s) 735, 862, 1111, 1823, 2450, 2505, 3110, 3356
VspI ATTAAT 4 cut(s) 896, 1001, 2030, 2838
XapI RAATTY 4 cut(s) 302, 638, 2977, 3328
XbaI TCTAGA 1 cut(s) 959
XceI RCATGY 4 cut(s) 195, 536, 1861, 2312
XcmI CCANNNNNNNNNTGG 1 cut(s) 3042
XmaJI CCTAGG 1 cut(s) 1969
XmiI GTMKAC 3 cut(s) 1677, 2333, 3088
XmnI GAANNNNTTC 3 cut(s) 1468, 2397, 2981
ZrmI AGTACT 1 cut(s) 1087
Zsp2I ATGCAT 3 cut(s) 193, 538, 1863
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.