Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008219.1

Orthogroup ID

OG0014781

Physical Location & Seq

Genomic Coordinates Forward (+)

24235 .. 32504

Gene Structure 8270 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008219.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

atggcaatggcttctcgtccaaaactctacgccggcgacttagcttcatctttcagcttctcccggtctttgccaaaccctaagcttttcccctctccacgtgcctacttcgccgctccgaaaagccggcggttccaagtgttggctttcgccgtcaagcggagccctaagcgtctcaaatactccactcctcgcttcaccaaggaggatgagttactgtatgtcggagttgatccatcaggagttgatagctggaaattggagccggtcattgatcttctgaaacaaggagcggttggggtcattcctactgacactgtgtatgcaatagtctgtgacccgagaaaccactcagccattgatcgtcttcgtaggaatatatctagaactgaaatcattgtgattgaattacaagctggactattaatcggcaggacaggcactcctgtctcaccggttccctcaattacattcctttatgattctgtggagaccggtgtagggctgagtactggttctccaaatgttactaaggaccacagcataaatgtagtagttgagtttacaaagccggtttttggctttgaggcctcaatggtgaatgtggtcgggggtagaataacaaggtttagggcactttcaagagctctttactccttgaatgtacaagcaatcactgagcatatggtgtcaatttctgttcctgcagggaaggtatatgatatatcaggaaatcttaacatggcatctaaccaacttgaagtgaaacactactcaacccctgcaatatcaatggcattgcagtcatttgttagtgctggtatattagcaacatcactagcagctgctattctctcaatttcaactgcacatcttggagcagtgggaattgcttctgagagaatcaatgttgttgtctccgattcctcaatgaatctacatggtctggtcggacaccttcaagtttttgtcctctcagactggttatcagttaatcaaccaattgaatatttcgagacaaccaaaggtctttggtggctcatacctcgtcaaaagcttccatggaagaaggatagtggttcagttttgcaccaccatgtctacttggctgaagagaatcttcagaggaaatctattgcctcatctgtaggagggtcttcacataaaggggtcaacgttcaagttgactcgtatctagccaattcttcatatatgtgcaatgaagtaccagttcccatcaagatgggtcccaagtctggctggcttcttgagcagcataacatgcatatgactccttatggattaccccttcattctaatgaatatttcatgtatttcttgagaggagagccattgtctgctagcaatgtcatcaagggaatggagaattacctagggtgggaagacctactgatgaacttgttttggcttggtattggaggaggcactttagtcatcatccatttattgatattagttttcctaagatggagaactggaacaccagctcatggtttactgtcagttcccagatttgagctctttcttctaattctcatgctaccttgtatctctcagtcctcaacttttgttataaaaggtggtacaacaggaggaatcattactggagctttgttgctggctatcccagcagctcttataatatcagtgtgcctttttaatttaattgcaatcttctctgccagttatgttcagtacaaggaagtcaagcatgtagctagaaaagaaccgtggtctacaaggatttggtattattttacagggagtcctagtgctggaaagtggttttataaggaagggattccttcatctttccttccacgtttcgggattctctttgaaagtttgaagggtcctccattatttgtgtttgttgatcaaaatgaaccaaacagcgtatccaagtggaccggaagtggcaatagtggtattgggaggatgcgaccagtcagcttggatggcagcattgaggaaattaagattcctataagggtcttgggatgtgctagatcttcctacattattgttgatctttcaagacgggtctgcttggggatcatatgtggagcttactcatcaaggaaatcaaacctaagcctctttgcactgaccattacgctggtcttctcttccttacctttgttacccaacttatcaatgagtggtatgctttgctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

732

Amino Acids

80.28

Weight (kDa)

9.44

Isoelectric Point (pI)

45.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014781)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g53530 FvH4_6g53640
malus_domestica	MD09G1010700.v1.1
prunus_persica	Prupe.3G306400_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0175571
rosa_laevigata	RLG00000022340
rosa_multiflora	Rmu_co8247963.1_g000001 Rmu_sc0000998.1_g000024 Rmu_sc0008219.1_g000005 Rmu_sc0013970.1_g000003
rosa_roxburghii	Rroxscaffold_2G00077210
rosa_rugosa	Rorug02G0586500
rosa_samantha	Rh2AG665500 Rh2BG676300 Rh2CG639500 Rh2DG690300
rosa_wichuraiana	Rw2G054560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	1595, 1661, 1812
AccB7I	CCANNNNNTGG	2 cut(s)	142, 1511
AccBSI	CCGCTC	2 cut(s)	116, 293
AccI	GTMKAC	2 cut(s)	1101, 1757
AciI	CCGC	4 cut(s)	114, 130, 160, 293
AclI	AACGTT	1 cut(s)	1176
AclWI	GGATC	2 cut(s)	227, 2084
AcuI	CTGAAG	2 cut(s)	1106, 1131
AcvI	CACGTG	1 cut(s)	101
AfaI	GTAC	5 cut(s)	511, 666, 1227, 1606, 1718
AfiI	CCNNNNNNNGG	9 cut(s)	142, 159, 501, 578, 1256, 1399, 1511, 1796, 1847
AgeI	ACCGGT	2 cut(s)	454, 494
Alw21I	GWGCWC	2 cut(s)	649, 1542
Alw26I	GTCTC	5 cut(s)	179, 454, 485, 922, 1010
AlwI	GGATC	2 cut(s)	227, 2084
Ama87I	CYCGRG	1 cut(s)	340
AoxI	GGCC	1 cut(s)	588
ApeKI	GCWGC	5 cut(s)	842, 845, 1273, 1652, 1983
AseI	ATTAAT	1 cut(s)	425
AsiGI	ACCGGT	2 cut(s)	454, 494
Asp700I	GAANNNNTTC	2 cut(s)	892, 1821
AspA2I	CCTAGG	1 cut(s)	1393
AspS9I	GGNCC	4 cut(s)	535, 1247, 1874, 1929
AsuC2I	CCSGG	1 cut(s)	64
AsuHPI	GGTGA	3 cut(s)	190, 444, 610
AsuNHI	GCTAGC	1 cut(s)	1361
AvaI	CYCGRG	1 cut(s)	340
AvaII	GGWCC	4 cut(s)	535, 1247, 1874, 1929
AvrII	CCTAGG	1 cut(s)	1393
BaeGI	GKGCMC	1 cut(s)	637
BanII	GRGCYC	3 cut(s)	167, 649, 1542
BbrPI	CACGTG	1 cut(s)	101
BbsI	GAAGAC	4 cut(s)	359, 1149, 1410, 2137
Bbv12I	GWGCWC	2 cut(s)	649, 1542
BbvI	GCAGC	5 cut(s)	832, 854, 1285, 1664, 1995
BccI	CCATC	5 cut(s)	244, 1237, 1244, 1482, 1973
BceAI	ACGGC	1 cut(s)	137
BciVI	GTATCC	1 cut(s)	1930
BclI	TGATCA	1 cut(s)	1897
BcnI	CCSGG	1 cut(s)	64
BcoDI	GTCTC	5 cut(s)	179, 454, 485, 922, 1010
BfaI	CTAG	8 cut(s)	384, 839, 1196, 1362, 1394, 1740, 1791, 2028
BfmI	CTRYAG	2 cut(s)	705, 1146
BfuI	GTATCC	1 cut(s)	1930
BglII	AGATCT	1 cut(s)	2030
BisI	GCNGC	6 cut(s)	114, 843, 846, 1274, 1653, 1984
BlnI	CCTAGG	1 cut(s)	1393
BlsI	GCNGC	6 cut(s)	115, 844, 847, 1275, 1654, 1985
BmcAI	AGTACT	1 cut(s)	511
Bme1390I	CCNGG	1 cut(s)	64
Bme18I	GGWCC	4 cut(s)	535, 1247, 1874, 1929
BmeT110I	CYCGRG	1 cut(s)	340
BmgT120I	GGNCC	4 cut(s)	535, 1247, 1874, 1929
BmiI	GGNNCC	7 cut(s)	134, 164, 264, 459, 1248, 1249, 1875
BmrFI	CCNGG	1 cut(s)	64
BmsI	GCATC	2 cut(s)	755, 1950
BmtI	GCTAGC	1 cut(s)	1365
BpiI	GAAGAC	4 cut(s)	359, 1149, 1410, 2137
BpmI	CTGGAG	1 cut(s)	1647
Bpu10I	CCTNAGC	3 cut(s)	81, 168, 2114
BpuEI	CTTGAG	2 cut(s)	1289, 1360
BpuMI	CCSGG	1 cut(s)	64
BsaAI	YACGTR	1 cut(s)	101
BsaI	GGTCTC	1 cut(s)	485
BsaJI	CCNNGG	4 cut(s)	201, 1061, 1393, 1751
BsaWI	WCCGGW	3 cut(s)	454, 494, 1931
BsaXI	ACNNNNNCTCC	8 cut(s)	197, 227, 427, 457, 502, 532, 1777, 1807
Bsc4I	CCNNNNNNNGG	9 cut(s)	142, 159, 501, 578, 1256, 1399, 1511, 1796, 1847
Bse118I	RCCGGY	6 cut(s)	32, 126, 265, 454, 494, 571
Bse1I	ACTGG	7 cut(s)	517, 986, 1229, 1501, 1630, 1704, 1967
Bse3DI	GCAATG	4 cut(s)	12, 797, 1225, 1372
BseDI	CCNNGG	4 cut(s)	201, 1061, 1393, 1751
BseGI	GGATG	5 cut(s)	214, 1458, 1965, 1984, 2027
BseLI	CCNNNNNNNGG	9 cut(s)	142, 159, 501, 578, 1256, 1399, 1511, 1796, 1847
BseMI	GCAATG	4 cut(s)	12, 797, 1225, 1372
BseMII	CTCAG	6 cut(s)	366, 497, 669, 888, 990, 1589
BseNI	ACTGG	7 cut(s)	517, 986, 1229, 1501, 1630, 1704, 1967
BseRI	GAGGAG	3 cut(s)	180, 1359, 1455
BseSI	GKGCMC	1 cut(s)	637
BseXI	GCAGC	5 cut(s)	832, 854, 1285, 1664, 1995
BseYI	CCCAGC	1 cut(s)	1648
BsgI	GTGCAG	1 cut(s)	852
BshFI	GGCC	1 cut(s)	590
BshTI	ACCGGT	2 cut(s)	454, 494
BsiHKAI	GWGCWC	2 cut(s)	649, 1542
BsiHKCI	CYCGRG	1 cut(s)	340
BsiSI	CCGG	8 cut(s)	33, 64, 127, 266, 455, 495, 572, 1932
BslFI	GGGAC	1 cut(s)	1233
BslI	CCNNNNNNNGG	9 cut(s)	142, 159, 501, 578, 1256, 1399, 1511, 1796, 1847
BsmAI	GTCTC	5 cut(s)	179, 454, 485, 922, 1010
BsmBI	CGTCTC	1 cut(s)	179
BsmFI	GGGAC	1 cut(s)	1233
BsnI	GGCC	1 cut(s)	590
Bso31I	GGTCTC	1 cut(s)	485
BsoBI	CYCGRG	1 cut(s)	340
Bsp1286I	GDGCHC	4 cut(s)	167, 637, 649, 1542
Bsp1407I	TGTACA	1 cut(s)	664
Bsp143I	GATC	7 cut(s)	232, 274, 361, 1897, 2030, 2050, 2076
Bsp19I	CCATGG	1 cut(s)	1061
BspACI	CCGC	4 cut(s)	114, 130, 160, 293
BspANI	GGCC	1 cut(s)	590
BspCNI	CTCAG	6 cut(s)	365, 498, 670, 889, 989, 1588
BspLI	GGNNCC	7 cut(s)	134, 164, 264, 459, 1248, 1249, 1875
BspMAI	CTGCAG	1 cut(s)	709
BspOI	GCTAGC	1 cut(s)	1365
BspPI	GGATC	2 cut(s)	227, 2084
BspTNI	GGTCTC	1 cut(s)	485
BsrBI	CCGCTC	2 cut(s)	116, 293
BsrDI	GCAATG	4 cut(s)	12, 797, 1225, 1372
BsrFI	RCCGGY	6 cut(s)	32, 126, 265, 454, 494, 571
BsrGI	TGTACA	1 cut(s)	664
BsrI	ACTGG	7 cut(s)	517, 986, 1229, 1501, 1630, 1704, 1967
BssAI	RCCGGY	6 cut(s)	32, 126, 265, 454, 494, 571
BssECI	CCNNGG	4 cut(s)	201, 1061, 1393, 1751
BssMI	GATC	7 cut(s)	232, 274, 361, 1897, 2030, 2050, 2076
BssT1I	CCWWGG	3 cut(s)	201, 1061, 1393
Bst4CI	ACNGT	4 cut(s)	219, 319, 1521, 1752
Bst6I	CTCTTC	2 cut(s)	1107, 2155
BstAPI	GCANNNNNTGC	1 cut(s)	1282
BstAUI	TGTACA	1 cut(s)	664
BstBAI	YACGTR	1 cut(s)	101
BstC8I	GCNNGC	5 cut(s)	34, 128, 1262, 1363, 1641
BstDSI	CCRYGG	2 cut(s)	1061, 1751
BstF5I	GGATG	5 cut(s)	214, 1458, 1965, 1984, 2027
BstKTI	GATC	7 cut(s)	235, 277, 364, 1900, 2033, 2053, 2079
BstMAI	GTCTC	5 cut(s)	179, 454, 485, 922, 1010
BstMBI	GATC	7 cut(s)	232, 274, 361, 1897, 2030, 2050, 2076
BstMWI	GCNNNNNNNGC	6 cut(s)	110, 438, 1270, 1282, 1649, 1980
BstNSI	RCATGY	2 cut(s)	1285, 1736
BstSCI	CCNGG	1 cut(s)	62
BstSFI	CTRYAG	2 cut(s)	705, 1146
BstSLI	GKGCMC	1 cut(s)	637
BstV1I	GCAGC	5 cut(s)	832, 854, 1285, 1664, 1995
BstV2I	GAAGAC	4 cut(s)	359, 1149, 1410, 2137
BstX2I	RGATCY	1 cut(s)	2030
BstXI	CCANNNNNNTGG	2 cut(s)	1243, 2140
BstYI	RGATCY	1 cut(s)	2030
BsuI	GTATCC	1 cut(s)	1930
BsuRI	GGCC	1 cut(s)	590
BtgI	CCRYGG	2 cut(s)	1061, 1751
BtsCI	GGATG	5 cut(s)	214, 1458, 1965, 1984, 2027
BtsI	GCAGTG	1 cut(s)	888
BtsIMutI	CAGTG	5 cut(s)	315, 675, 888, 1674, 2126
Cac8I	GCNNGC	5 cut(s)	34, 128, 1262, 1363, 1641
Cfr10I	RCCGGY	6 cut(s)	32, 126, 265, 454, 494, 571
Cfr13I	GGNCC	4 cut(s)	535, 1247, 1874, 1929
CseI	GACGC	1 cut(s)	161
Csp6I	GTAC	5 cut(s)	510, 665, 1226, 1605, 1717
CspAI	ACCGGT	2 cut(s)	454, 494
CviAII	CATG	9 cut(s)	742, 941, 1062, 1097, 1282, 1330, 1511, 1558, 1733
CviQI	GTAC	5 cut(s)	510, 665, 1226, 1605, 1717
DpnI	GATC	7 cut(s)	234, 276, 363, 1899, 2032, 2052, 2078
DpnII	GATC	7 cut(s)	232, 274, 361, 1897, 2030, 2050, 2076
Eam1104I	CTCTTC	2 cut(s)	1107, 2155
EarI	CTCTTC	2 cut(s)	1107, 2155
Ecl136II	GAGCTC	2 cut(s)	647, 1540
Eco130I	CCWWGG	3 cut(s)	201, 1061, 1393
Eco147I	AGGCCT	1 cut(s)	590
Eco24I	GRGCYC	3 cut(s)	167, 649, 1542
Eco31I	GGTCTC	1 cut(s)	485
Eco47I	GGWCC	4 cut(s)	535, 1247, 1874, 1929
Eco53kI	GAGCTC	2 cut(s)	647, 1540
Eco57I	CTGAAG	2 cut(s)	1106, 1131
Eco72I	CACGTG	1 cut(s)	101
Eco88I	CYCGRG	1 cut(s)	340
EcoICRI	GAGCTC	2 cut(s)	647, 1540
EcoO109I	RGGNCCY	2 cut(s)	1247, 1874
EcoT14I	CCWWGG	3 cut(s)	201, 1061, 1393
EcoT22I	ATGCAT	1 cut(s)	1287
EcoT38I	GRGCYC	3 cut(s)	167, 649, 1542
ErhI	CCWWGG	3 cut(s)	201, 1061, 1393
Esp3I	CGTCTC	1 cut(s)	179
FaeI	CATG	9 cut(s)	745, 944, 1065, 1100, 1285, 1333, 1514, 1561, 1736
FalI	AAGNNNNNCTT	2 cut(s)	1104, 1136
FaqI	GGGAC	1 cut(s)	1233
FatI	CATG	9 cut(s)	741, 940, 1061, 1096, 1281, 1329, 1510, 1557, 1732
FauNDI	CATATG	3 cut(s)	684, 1287, 2081
FbaI	TGATCA	1 cut(s)	1897
FblI	GTMKAC	2 cut(s)	1101, 1757
Fnu4HI	GCNGC	6 cut(s)	114, 843, 846, 1274, 1653, 1984
FokI	GGATG	5 cut(s)	221, 1445, 1972, 1991, 2034
FriOI	GRGCYC	3 cut(s)	167, 649, 1542
Fsp4HI	GCNGC	6 cut(s)	114, 843, 846, 1274, 1653, 1984
FspBI	CTAG	8 cut(s)	384, 839, 1196, 1362, 1394, 1740, 1791, 2028
GluI	GCNGC	6 cut(s)	114, 843, 846, 1274, 1653, 1984
GsaI	CCCAGC	1 cut(s)	1652
GsuI	CTGGAG	1 cut(s)	1647
HaeIII	GGCC	1 cut(s)	590
HapII	CCGG	8 cut(s)	33, 64, 127, 266, 455, 495, 572, 1932
HgaI	GACGC	1 cut(s)	161
Hin1II	CATG	9 cut(s)	745, 944, 1065, 1100, 1285, 1333, 1514, 1561, 1736
HincII	GTYRAC	2 cut(s)	1174, 1186
HindII	GTYRAC	2 cut(s)	1174, 1186
HindIII	AAGCTT	2 cut(s)	83, 1055
HpaII	CCGG	8 cut(s)	33, 64, 127, 266, 455, 495, 572, 1932
HphI	GGTGA	3 cut(s)	190, 444, 610
Hpy166II	GTNNAC	7 cut(s)	564, 1102, 1174, 1186, 1517, 1758, 1929
Hpy188I	TCNGA	8 cut(s)	120, 227, 282, 898, 922, 953, 979, 1125
Hpy8I	GTNNAC	7 cut(s)	564, 1102, 1174, 1186, 1517, 1758, 1929
HpyAV	CCTTC	8 cut(s)	706, 968, 1063, 1319, 1811, 1836, 1847, 1864
HpyCH4III	ACNGT	4 cut(s)	219, 319, 1521, 1752
HpyCH4IV	ACGT	3 cut(s)	100, 1176, 1843
HpyF10VI	GCNNNNNNNGC	6 cut(s)	110, 438, 1270, 1282, 1649, 1980
HpySE526I	ACGT	3 cut(s)	100, 1176, 1843
Hsp92II	CATG	9 cut(s)	745, 944, 1065, 1100, 1285, 1333, 1514, 1561, 1736
KflI	GGGWCCC	1 cut(s)	1247
KroI	GCCGGC	2 cut(s)	32, 126
KroNI	GCCGGC	2 cut(s)	34, 128
Ksp22I	TGATCA	1 cut(s)	1897
Kzo9I	GATC	7 cut(s)	232, 274, 361, 1897, 2030, 2050, 2076
LmnI	GCTCC	7 cut(s)	121, 162, 262, 290, 878, 1628, 2087
Lsp1109I	GCAGC	5 cut(s)	832, 854, 1285, 1664, 1995
LweI	GCATC	2 cut(s)	755, 1950
MaeI	CTAG	8 cut(s)	384, 839, 1196, 1362, 1394, 1740, 1791, 2028
MaeII	ACGT	3 cut(s)	100, 1176, 1843
MaeIII	GTNAC	4 cut(s)	213, 335, 526, 2163
MalI	GATC	7 cut(s)	234, 276, 363, 1899, 2032, 2052, 2078
MbiI	CCGCTC	2 cut(s)	116, 293
MboI	GATC	7 cut(s)	232, 274, 361, 1897, 2030, 2050, 2076
MfeI	CAATTG	1 cut(s)	1002
MflI	RGATCY	1 cut(s)	2030
MhlI	GDGCHC	4 cut(s)	167, 637, 649, 1542
MlyI	GAGTC	3 cut(s)	1181, 1285, 1795
MmeI	TCCRAC	2 cut(s)	205, 931
Mph1103I	ATGCAT	1 cut(s)	1287
MreI	CGCCGGCG	1 cut(s)	32
MroNI	GCCGGC	2 cut(s)	32, 126
MroXI	GAANNNNTTC	2 cut(s)	892, 1821
MseI	TTAA	6 cut(s)	425, 738, 993, 1680, 1685, 1998
MslI	CAYNNNNRTG	5 cut(s)	1095, 1213, 1241, 1286, 1317
MspA1I	CMGCKG	1 cut(s)	845
MspI	CCGG	8 cut(s)	33, 64, 127, 266, 455, 495, 572, 1932
MspR9I	CCNGG	1 cut(s)	64
MunI	CAATTG	1 cut(s)	1002
MwoI	GCNNNNNNNGC	6 cut(s)	110, 438, 1270, 1282, 1649, 1980
NaeI	GCCGGC	2 cut(s)	34, 128
NciI	CCSGG	1 cut(s)	64
NcoI	CCATGG	1 cut(s)	1061
NdeI	CATATG	3 cut(s)	684, 1287, 2081
NdeII	GATC	7 cut(s)	232, 274, 361, 1897, 2030, 2050, 2076
NgoMIV	GCCGGC	2 cut(s)	32, 126
NheI	GCTAGC	1 cut(s)	1361
NlaIII	CATG	9 cut(s)	745, 944, 1065, 1100, 1285, 1333, 1514, 1561, 1736
NlaIV	GGNNCC	7 cut(s)	134, 164, 264, 459, 1248, 1249, 1875
NmuCI	GTSAC	1 cut(s)	335
NsiI	ATGCAT	1 cut(s)	1287
NspI	RCATGY	2 cut(s)	1285, 1736
PceI	AGGCCT	1 cut(s)	590
PdiI	GCCGGC	2 cut(s)	34, 128
PdmI	GAANNNNTTC	2 cut(s)	892, 1821
PfeI	GAWTC	9 cut(s)	482, 903, 923, 934, 1117, 1617, 1822, 1852, 2002
PflMI	CCANNNNNTGG	2 cut(s)	142, 1511
PinAI	ACCGGT	2 cut(s)	454, 494
PkrI	GCNGC	6 cut(s)	115, 844, 847, 1275, 1654, 1985
PleI	GAGTC	3 cut(s)	1181, 1285, 1794
PmaCI	CACGTG	1 cut(s)	101
PmlI	CACGTG	1 cut(s)	101
PpsI	GAGTC	3 cut(s)	1181, 1285, 1794
Ppu21I	YACGTR	1 cut(s)	101
PpuMI	RGGWCCY	2 cut(s)	1247, 1874
PshBI	ATTAAT	1 cut(s)	425
PsiI	TTATAA	3 cut(s)	1595, 1661, 1812
Psp124BI	GAGCTC	2 cut(s)	649, 1542
Psp1406I	AACGTT	1 cut(s)	1176
Psp5II	RGGWCCY	2 cut(s)	1247, 1874
PspCI	CACGTG	1 cut(s)	101
PspFI	CCCAGC	1 cut(s)	1648
PspN4I	GGNNCC	7 cut(s)	134, 164, 264, 459, 1248, 1249, 1875
PspPI	GGNCC	4 cut(s)	535, 1247, 1874, 1929
PspPPI	RGGWCCY	2 cut(s)	1247, 1874
PstI	CTGCAG	1 cut(s)	709
PsuI	RGATCY	1 cut(s)	2030
PvuII	CAGCTG	1 cut(s)	845
RsaI	GTAC	5 cut(s)	511, 666, 1227, 1606, 1718
RsaNI	GTAC	5 cut(s)	510, 665, 1226, 1605, 1717
RseI	CAYNNNNRTG	5 cut(s)	1095, 1213, 1241, 1286, 1317
SacI	GAGCTC	2 cut(s)	649, 1542
SaqAI	TTAA	6 cut(s)	425, 738, 993, 1680, 1685, 1998
SatI	GCNGC	6 cut(s)	114, 843, 846, 1274, 1653, 1984
Sau3AI	GATC	7 cut(s)	232, 274, 361, 1897, 2030, 2050, 2076
Sau96I	GGNCC	4 cut(s)	535, 1247, 1874, 1929
SbfI	CCTGCAGG	1 cut(s)	709
ScaI	AGTACT	1 cut(s)	511
SchI	GAGTC	3 cut(s)	1181, 1285, 1795
ScrFI	CCNGG	1 cut(s)	64
SdaI	CCTGCAGG	1 cut(s)	709
SduI	GDGCHC	4 cut(s)	167, 637, 649, 1542
SfaNI	GCATC	2 cut(s)	755, 1950
SfcI	CTRYAG	2 cut(s)	705, 1146
SgrAI	CRCCGGYG	1 cut(s)	32
SinI	GGWCC	4 cut(s)	535, 1247, 1874, 1929
SmiMI	CAYNNNNRTG	5 cut(s)	1095, 1213, 1241, 1286, 1317
SmlI	CTYRAG	2 cut(s)	1268, 1339
SmoI	CTYRAG	2 cut(s)	1268, 1339
Sse8387I	CCTGCAGG	1 cut(s)	709
SseBI	AGGCCT	1 cut(s)	590
SsiI	CCGC	4 cut(s)	114, 130, 160, 293
SspI	AATATT	2 cut(s)	1010, 1325
SspMI	CTAG	8 cut(s)	384, 839, 1196, 1362, 1394, 1740, 1791, 2028
SstI	GAGCTC	2 cut(s)	649, 1542
StuI	AGGCCT	1 cut(s)	590
StyD4I	CCNGG	1 cut(s)	62
StyI	CCWWGG	3 cut(s)	201, 1061, 1393
TaaI	ACNGT	4 cut(s)	219, 319, 1521, 1752
TaiI	ACGT	3 cut(s)	103, 1179, 1846
TaqI	TCGA	1 cut(s)	1014
TatI	WGTACW	3 cut(s)	509, 664, 1716
TauI	GCSGC	1 cut(s)	116
TfiI	GAWTC	9 cut(s)	482, 903, 923, 934, 1117, 1617, 1822, 1852, 2002
Tru1I	TTAA	6 cut(s)	425, 738, 993, 1680, 1685, 1998
Tru9I	TTAA	6 cut(s)	425, 738, 993, 1680, 1685, 1998
TscAI	CASTG	5 cut(s)	322, 682, 888, 1674, 2133
TseFI	GTSAC	1 cut(s)	335
TseI	GCWGC	5 cut(s)	842, 845, 1273, 1652, 1983
Tsp45I	GTSAC	1 cut(s)	335
TspRI	CASTG	5 cut(s)	322, 682, 888, 1674, 2133
Van91I	CCANNNNNTGG	2 cut(s)	142, 1511
VpaK11BI	GGWCC	4 cut(s)	535, 1247, 1874, 1929
VspI	ATTAAT	1 cut(s)	425
XbaI	TCTAGA	1 cut(s)	383
XceI	RCATGY	2 cut(s)	1285, 1736
XmaJI	CCTAGG	1 cut(s)	1393
XmiI	GTMKAC	2 cut(s)	1101, 1757
XmnI	GAANNNNTTC	2 cut(s)	892, 1821
XspI	CTAG	8 cut(s)	384, 839, 1196, 1362, 1394, 1740, 1791, 2028
ZrmI	AGTACT	1 cut(s)	511
Zsp2I	ATGCAT	1 cut(s)	1287

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.