Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0002574

Physical Location & Seq

Genomic Coordinates Forward (+)

70951684 .. 70957423

Gene Structure 5740 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0586500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1653 bp

ATGGCGGGTCAGAGGAATAGTTACGGAAAGCGCTCCCATTCTCATTCTCAGTCCGATTACTCCGACAACGGCGGCGGCGGCGGCAAGAGAAGAAACCCCGGCGAGGAAAGAGAGCAGTTCATCATCGACGCCGAGGACACGGTTTACCGGTACTTGTGCCCGGTGAAGAAAATCGGGAGCATAATCGGAAGAGGAGGAGAGATTGTGAAGCAACTTAGGGTCGACACCAAGTCCAAGATTCGAATCGGCGAAACGGTGCCCGGTGCCGAAGAGAGAGTCGTGACCATCTACAGCGCCAGCGACGAGACCAATGGGTTTGAGGACAGTGGGAATTTCGTTGCTCCGGCGCAGGATGCTCTGTTTCGGGTTCACGATAGGGTTATTGCTGAAGATACACACGCCGAGGAGGAGATGGATGCCACTCACCATGTTACGGCGAGGCTGCTGGTGCCGTCCGACCAGATTGGTTGCATAATTGGGAAAGGAGGGCAGATAGTTCAGACCATTCGCAGCGAAACTGGTGCGCAAATTCGGATACTCAAGGATGATCACTTGCCTGCTTGTGCATTGAACTCCGATGAGCTTGTACAGGTATCTGGGGAAGCTCCACTTGTTAAGAAGGCTCTTTTTCAAATTGCATCTCGCCTTCATGATAATCCATCACGGTCTCAGCATTTGCTTACGTCTTCAGTGCCTGTGTATGCTTCTGGTGGTTCACTCATGGGCCCAACTGGTGGTGGGCCTATAGTTGGGCTAGCTCCGCTGATGGGTCCTTATGGAGGAGGTTATAAAGGTGATGTTGGAGACTGGTCACGCTCCTTGTACTCGGCTCCGAGAGATGAAGGTTCTTCAAAAGAATTTTCTCTTCGCATGATTTGCCCAACTGCAAATATTGGAGGTGTGATTGGGAAGGGTGGTGTCATCATTAATCAAATCAGACAGGAATCTGGGGCTGCTATAAAAGTCGATAGTTCACAATCTGAAGGAGATGATTGCTTAATAACTGTTACTGCAAAGGAGTTCTTCGAAGATCAATACTCGTCAGTTGTAGAAGCAGCAGTGCGTTTGCAACCCAGATGCAGCGAGAAAGTTGAAAGGGATTCAGGGATCCTCTCATTCACAACCCGCGTACTTGTTCCAACCTCACGAATTGGCTGCCTTATTGGTAAAGGAGGAGCTATTGTAACTGAGATGAGGAGACTAACTAAAGCTAATATTCGCATACTTTCAAAAGAAAATCTTCCCAAAATTGCATCTGAAGATGATGAAATGGTGCAGATTTCTGGAGACCTTGATATTGCCAAGGAAGCTCTTATACATGTTGTGACGCGATTGAGGGCAAACCTTTTCGACAGGGAAGGTGCAGTGTCTGCATTCCTTCCAACAGTTCTGCCTTATCTTCCTGTGGGAGGAGATGCGGCAGATGGTCCAAATTATGACAGTAGAGAAGGTAAAAGACATGGGCGTTATGGTGGTTATGGTGGCTCAAGTGATTTTGGAGCTAATGACAGTTATGGAAGTTATGGTGGTTCACAGGTTGGTGGTAGCGGCAGTCCCTATGGAGCTTATGGAGCTTATTCTTCTGGACGTACTGGTAGTTCTGGGTTATCTAGCCAGAACCCTGTTTCTCGGCGGAGAAACTATGGTTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005741 GO:0005742 GO:0005743 GO:0005744 GO:0006605 GO:0006626 GO:0006810 GO:0006839 GO:0006886 GO:0006996 GO:0007005 GO:0008104 GO:0008150 GO:0008320 GO:0008565 GO:0009987 GO:0015031 GO:0015399 GO:0015405 GO:0015450 GO:0015833 GO:0016020 GO:0016043 GO:0019866 GO:0019867 GO:0022804 GO:0022857 GO:0022884 GO:0031090 GO:0031966 GO:0031967 GO:0031968 GO:0031975 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042886 GO:0042887 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0070585 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072655 GO:0098588 GO:0098796 GO:0098798 GO:0098799 GO:0098800 GO:0098805 GO:1904680

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TOM20_plant

Protein Analysis

550

Amino Acids

58.66

Weight (kDa)

6.18

Isoelectric Point (pI)

44.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
KH_1	PF00013	49 - 98	1.3e-10	KH domain
KH_1	PF00013	145 - 213	3e-16	KH domain
KH_1	PF00013	289 - 338	5.5e-12	KH domain
KH_1	PF00013	374 - 437	1.1e-12	KH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002574)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27090 AT3G27090 AT3G27090
fragaria_vesca	FvH4_6g53510 FvH4_6g53510 FvH4_6g53510
malus_domestica	MD00G1139300.v1.1 MD09G1011000.v1.1
prunus_persica	Prupe.3G306100_v2.0.a1 Prupe.3G306100_v2.0.a1 Prupe.3G306100_v2.0.a1 Prupe.3G306100_v2.0.a1 Prupe.8G002400_v2.0.a1
pyrus_communis	pycom111g00920 pycom17g00940
rosa_chinensis	RchiOBHm_Chr2g0175541 RchiOBHm_Chr6g0249531
rosa_laevigata	RLG00000015572 RLG00000022337
rosa_multiflora	Rmu_co8403361.1_g000001 Rmu_sc0008219.1_g000003 Rmu_sc0021955.1_g000008
rosa_roxburghii	Rroxscaffold_7G00217590
rosa_rugosa	Rorug02G0586000 Rorug02G0586100 Rorug02G0586200 Rorug02G0586300 Rorug02G0586400 Rorug02G0586500 Rorug05G0493300
rosa_samantha	Rh2AG665200 Rh2BG676000 Rh2CG639200 Rh2DG690000 Rh6AG003000 Rh6BG007100 Rh6CG002000 Rh6DG002000
rosa_wichuraiana	Rw2G054530 Rw6G000350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	789
Acc16I	TGCGCA	1 cut(s)	525
AccB1I	GGYRCC	3 cut(s)	256, 263, 448
AccB7I	CCANNNNNTGG	1 cut(s)	734
AccI	GTMKAC	1 cut(s)	222
AccII	CGCG	2 cut(s)	1128, 1330
AclWI	GGATC	2 cut(s)	1102, 1115
AcsI	RAATTY	3 cut(s)	331, 528, 857
AcuI	CTGAAG	4 cut(s)	408, 672, 1002, 1278
AcyI	GRCGYC	1 cut(s)	129
AfaI	GTAC	5 cut(s)	152, 588, 824, 1131, 1591
AfeI	AGCGCT	1 cut(s)	32
AfiI	CCNNNNNNNGG	7 cut(s)	103, 433, 734, 749, 767, 779, 1409
AflIII	ACRYGT	1 cut(s)	1318
AgeI	ACCGGT	1 cut(s)	147
AgsI	TTSAA	5 cut(s)	571, 632, 852, 1094, 1230
AhdI	GACNNNNNGTC	1 cut(s)	229
AluBI	AGCT	9 cut(s)	583, 605, 758, 1178, 1211, 1310, 1502, 1565, 1574
AluI	AGCT	9 cut(s)	583, 605, 758, 1178, 1211, 1310, 1502, 1565, 1574
Alw26I	GTCTC	5 cut(s)	299, 672, 798, 1192, 1281
AlwI	GGATC	2 cut(s)	1102, 1115
AlwNI	CAGNNNCTG	2 cut(s)	695, 1370
Aor51HI	AGCGCT	1 cut(s)	32
AoxI	GGCC	2 cut(s)	724, 740
ApaI	GGGCCC	1 cut(s)	728
ApeKI	GCWGC	6 cut(s)	442, 510, 953, 1055, 1080, 1155
ApoI	RAATTY	3 cut(s)	331, 528, 857
ArsI	GACNNNNNNTTYG	2 cut(s)	261, 293
AseI	ATTAAT	1 cut(s)	927
AsiGI	ACCGGT	1 cut(s)	147
Asp700I	GAANNNNTTC	1 cut(s)	1239
AspLEI	GCGC	4 cut(s)	33, 296, 349, 526
AspS9I	GGNCC	5 cut(s)	724, 725, 740, 770, 1427
AsuC2I	CCSGG	3 cut(s)	99, 161, 261
AsuHPI	GGTGA	3 cut(s)	175, 416, 806
AsuII	TTCGAA	2 cut(s)	241, 1026
AsuNHI	GCTAGC	1 cut(s)	754
AvaII	GGWCC	2 cut(s)	770, 1427
BaeGI	GKGCMC	3 cut(s)	161, 261, 728
BamHI	GGATCC	1 cut(s)	1107
BanI	GGYRCC	3 cut(s)	256, 263, 448
BanII	GRGCYC	1 cut(s)	728
BarI	GAAGNNNNNNTAC	2 cut(s)	1299, 1331
BbsI	GAAGAC	1 cut(s)	678
BbvI	GCAGC	6 cut(s)	429, 522, 940, 1067, 1092, 1142
BccI	CCATC	5 cut(s)	293, 406, 667, 760, 1418
BceAI	ACGGC	3 cut(s)	85, 436, 450
BcgI	CGANNNNNNTGC	4 cut(s)	503, 537, 1137, 1171
BciVI	GTATCC	1 cut(s)	528
BclI	TGATCA	1 cut(s)	547
BcnI	CCSGG	3 cut(s)	99, 161, 261
BcoDI	GTCTC	5 cut(s)	299, 672, 798, 1192, 1281
BfaI	CTAG	3 cut(s)	755, 1611, 1651
BfmI	CTRYAG	2 cut(s)	289, 744
BfoI	RGCGCY	2 cut(s)	34, 297
BfuI	GTATCC	1 cut(s)	528
Bme1390I	CCNGG	3 cut(s)	99, 161, 261
Bme18I	GGWCC	2 cut(s)	770, 1427
BmeRI	GACNNNNNGTC	1 cut(s)	229
BmgT120I	GGNCC	5 cut(s)	724, 725, 740, 770, 1427
BmiI	GGNNCC	7 cut(s)	258, 265, 450, 726, 771, 831, 1109
BmrFI	CCNGG	3 cut(s)	99, 161, 261
BmsI	GCATC	6 cut(s)	343, 406, 647, 1067, 1262, 1405
BmtI	GCTAGC	1 cut(s)	758
BpiI	GAAGAC	1 cut(s)	678
BpmI	CTGGAG	1 cut(s)	1305
Bpu14I	TTCGAA	2 cut(s)	241, 1026
BpuEI	CTTGAG	2 cut(s)	524, 1471
BpuMI	CCSGG	3 cut(s)	99, 161, 261
BsaBI	GATNNNNATC	1 cut(s)	242
BsaHI	GRCGYC	1 cut(s)	129
BsaI	GGTCTC	3 cut(s)	299, 672, 1281
BsaJI	CCNNGG	4 cut(s)	97, 132, 402, 1302
BsaWI	WCCGGW	1 cut(s)	147
BsaXI	ACNNNNNCTCC	4 cut(s)	189, 219, 1167, 1197
Bsc4I	CCNNNNNNNGG	7 cut(s)	103, 433, 734, 749, 767, 779, 1409
Bse118I	RCCGGY	1 cut(s)	147
Bse1I	ACTGG	4 cut(s)	523, 736, 812, 1597
Bse8I	GATNNNNATC	1 cut(s)	242
BseDI	CCNNGG	4 cut(s)	97, 132, 402, 1302
BseGI	GGATG	3 cut(s)	358, 421, 550
BseJI	GATNNNNATC	1 cut(s)	242
BseLI	CCNNNNNNNGG	7 cut(s)	103, 433, 734, 749, 767, 779, 1409
BseMII	CTCAG	3 cut(s)	62, 683, 1179
BseNI	ACTGG	4 cut(s)	523, 736, 812, 1597
BseRI	GAGGAG	8 cut(s)	207, 210, 419, 422, 795, 1188, 1210, 1425
BseSI	GKGCMC	3 cut(s)	161, 261, 728
BseXI	GCAGC	6 cut(s)	429, 522, 940, 1067, 1092, 1142
BsgI	GTGCAG	2 cut(s)	1295, 1383
Bsh1236I	CGCG	2 cut(s)	1128, 1330
BshFI	GGCC	2 cut(s)	726, 742
BshNI	GGYRCC	3 cut(s)	256, 263, 448
BshTI	ACCGGT	1 cut(s)	147
BsiSI	CCGG	5 cut(s)	99, 148, 161, 261, 344
BslFI	GGGAC	1 cut(s)	1539
BslI	CCNNNNNNNGG	7 cut(s)	103, 433, 734, 749, 767, 779, 1409
BsmAI	GTCTC	5 cut(s)	299, 672, 798, 1192, 1281
BsmFI	GGGAC	1 cut(s)	1539
BsmI	GAATGC	1 cut(s)	1373
BsnI	GGCC	2 cut(s)	726, 742
Bso31I	GGTCTC	3 cut(s)	299, 672, 1281
Bsp119I	TTCGAA	2 cut(s)	241, 1026
Bsp120I	GGGCCC	1 cut(s)	724
Bsp1286I	GDGCHC	3 cut(s)	161, 261, 728
Bsp1407I	TGTACA	1 cut(s)	586
Bsp143I	GATC	3 cut(s)	547, 1030, 1107
BspANI	GGCC	2 cut(s)	726, 742
BspCNI	CTCAG	3 cut(s)	61, 682, 1180
BspFNI	CGCG	2 cut(s)	1128, 1330
BspHI	TCATGA	1 cut(s)	649
BspLI	GGNNCC	7 cut(s)	258, 265, 450, 726, 771, 831, 1109
BspOI	GCTAGC	1 cut(s)	758
BspPI	GGATC	2 cut(s)	1102, 1115
BspT104I	TTCGAA	2 cut(s)	241, 1026
BspT107I	GGYRCC	3 cut(s)	256, 263, 448
BspTNI	GGTCTC	3 cut(s)	299, 672, 1281
BsrFI	RCCGGY	1 cut(s)	147
BsrGI	TGTACA	1 cut(s)	586
BsrI	ACTGG	4 cut(s)	523, 736, 812, 1597
BssAI	RCCGGY	1 cut(s)	147
BssECI	CCNNGG	4 cut(s)	97, 132, 402, 1302
BssMI	GATC	3 cut(s)	547, 1030, 1107
BssNI	GRCGYC	1 cut(s)	129
BssT1I	CCWWGG	1 cut(s)	1302
Bst4CI	ACNGT	8 cut(s)	142, 256, 326, 666, 1006, 1387, 1442, 1511
Bst6I	CTCTTC	3 cut(s)	184, 264, 870
BstACI	GRCGYC	1 cut(s)	129
BstAPI	GCANNNNNTGC	2 cut(s)	876, 1370
BstAUI	TGTACA	1 cut(s)	586
BstBI	TTCGAA	2 cut(s)	241, 1026
BstC8I	GCNNGC	3 cut(s)	298, 558, 756
BstDEI	CTNAG	4 cut(s)	48, 215, 669, 1188
BstENI	CCTNNNNNAGG	2 cut(s)	777, 1407
BstF5I	GGATG	3 cut(s)	358, 421, 550
BstFNI	CGCG	2 cut(s)	1128, 1330
BstH2I	RGCGCY	2 cut(s)	34, 297
BstHHI	GCGC	4 cut(s)	33, 296, 349, 526
BstKTI	GATC	3 cut(s)	550, 1033, 1110
BstMAI	GTCTC	5 cut(s)	299, 672, 798, 1192, 1281
BstMBI	GATC	3 cut(s)	547, 1030, 1107
BstMWI	GCNNNNNNNGC	9 cut(s)	78, 81, 353, 448, 760, 876, 1307, 1370, 1571
BstNSI	RCATGY	1 cut(s)	1322
BstSCI	CCNGG	3 cut(s)	97, 159, 259
BstSFI	CTRYAG	2 cut(s)	289, 744
BstSLI	GKGCMC	3 cut(s)	161, 261, 728
BstUI	CGCG	2 cut(s)	1128, 1330
BstV1I	GCAGC	6 cut(s)	429, 522, 940, 1067, 1092, 1142
BstV2I	GAAGAC	1 cut(s)	678
BstX2I	RGATCY	1 cut(s)	1107
BstYI	RGATCY	1 cut(s)	1107
BsuI	GTATCC	1 cut(s)	528
BsuRI	GGCC	2 cut(s)	726, 742
BtsCI	GGATG	3 cut(s)	358, 421, 550
BtsI	GCAGTG	2 cut(s)	1065, 1371
BtsIMutI	CAGTG	4 cut(s)	331, 696, 1065, 1371
Cac8I	GCNNGC	3 cut(s)	298, 558, 756
CaiI	CAGNNNCTG	2 cut(s)	695, 1370
CciI	TCATGA	1 cut(s)	649
CfoI	GCGC	4 cut(s)	33, 296, 349, 526
Cfr10I	RCCGGY	1 cut(s)	147
Cfr13I	GGNCC	5 cut(s)	724, 725, 740, 770, 1427
CseI	GACGC	2 cut(s)	137, 1336
Csp6I	GTAC	5 cut(s)	151, 587, 823, 1130, 1590
CspAI	ACCGGT	1 cut(s)	147
CviAII	CATG	6 cut(s)	428, 650, 721, 871, 1319, 1460
CviQI	GTAC	5 cut(s)	151, 587, 823, 1130, 1590
DdeI	CTNAG	4 cut(s)	48, 215, 669, 1188
DpnI	GATC	3 cut(s)	549, 1032, 1109
DpnII	GATC	3 cut(s)	547, 1030, 1107
DriI	GACNNNNNGTC	1 cut(s)	229
Eam1104I	CTCTTC	3 cut(s)	184, 264, 870
Eam1105I	GACNNNNNGTC	1 cut(s)	229
EarI	CTCTTC	3 cut(s)	184, 264, 870
EciI	GGCGGA	1 cut(s)	1648
Eco130I	CCWWGG	1 cut(s)	1302
Eco24I	GRGCYC	1 cut(s)	728
Eco31I	GGTCTC	3 cut(s)	299, 672, 1281
Eco47I	GGWCC	2 cut(s)	770, 1427
Eco47III	AGCGCT	1 cut(s)	32
Eco57I	CTGAAG	4 cut(s)	408, 672, 1002, 1278
EcoNI	CCTNNNNNAGG	2 cut(s)	777, 1407
EcoO109I	RGGNCCY	1 cut(s)	770
EcoT14I	CCWWGG	1 cut(s)	1302
EcoT38I	GRGCYC	1 cut(s)	728
ErhI	CCWWGG	1 cut(s)	1302
FaeI	CATG	6 cut(s)	431, 653, 724, 874, 1322, 1463
FalI	AAGNNNNNCTT	6 cut(s)	594, 626, 1007, 1039, 1224, 1256
FaqI	GGGAC	1 cut(s)	1539
FatI	CATG	6 cut(s)	427, 649, 720, 870, 1318, 1459
FauI	CCCGC	1 cut(s)	1133
FbaI	TGATCA	1 cut(s)	547
FblI	GTMKAC	1 cut(s)	222
FokI	GGATG	3 cut(s)	365, 428, 557
FriOI	GRGCYC	1 cut(s)	728
FspBI	CTAG	3 cut(s)	755, 1611, 1651
FspI	TGCGCA	1 cut(s)	525
GlaI	GCGC	4 cut(s)	32, 295, 348, 525
GsuI	CTGGAG	1 cut(s)	1305
HaeII	RGCGCY	2 cut(s)	34, 297
HaeIII	GGCC	2 cut(s)	726, 742
HapII	CCGG	5 cut(s)	99, 148, 161, 261, 344
HgaI	GACGC	2 cut(s)	137, 1336
HhaI	GCGC	4 cut(s)	33, 296, 349, 526
Hin1I	GRCGYC	1 cut(s)	129
Hin1II	CATG	6 cut(s)	431, 653, 724, 874, 1322, 1463
Hin6I	GCGC	4 cut(s)	31, 294, 347, 524
HinP1I	GCGC	4 cut(s)	31, 294, 347, 524
HincII	GTYRAC	1 cut(s)	223
HindII	GTYRAC	1 cut(s)	223
HinfI	GANTC	5 cut(s)	238, 243, 276, 944, 1100
HpaII	CCGG	5 cut(s)	99, 148, 161, 261, 344
HphI	GGTGA	3 cut(s)	175, 416, 806
Hpy166II	GTNNAC	6 cut(s)	145, 223, 370, 716, 974, 1532
Hpy188III	TCNNGA	7 cut(s)	175, 280, 371, 650, 1146, 1284, 1584
Hpy8I	GTNNAC	6 cut(s)	145, 223, 370, 716, 974, 1532
Hpy99I	CGWCG	2 cut(s)	131, 305
HpyAV	CCTTC	8 cut(s)	613, 656, 836, 904, 977, 1352, 1388, 1442
HpyCH4III	ACNGT	8 cut(s)	142, 256, 326, 666, 1006, 1387, 1442, 1511
HpyCH4IV	ACGT	2 cut(s)	683, 1588
HpyF10VI	GCNNNNNNNGC	9 cut(s)	78, 81, 353, 448, 760, 876, 1307, 1370, 1571
HpyF3I	CTNAG	4 cut(s)	48, 215, 669, 1188
HpySE526I	ACGT	2 cut(s)	683, 1588
Hsp92I	GRCGYC	1 cut(s)	129
Hsp92II	CATG	6 cut(s)	431, 653, 724, 874, 1322, 1463
HspAI	GCGC	4 cut(s)	31, 294, 347, 524
Ksp22I	TGATCA	1 cut(s)	547
Kzo9I	GATC	3 cut(s)	547, 1030, 1107
Lsp1109I	GCAGC	6 cut(s)	429, 522, 940, 1067, 1092, 1142
LweI	GCATC	6 cut(s)	343, 406, 647, 1067, 1262, 1405
MaeI	CTAG	3 cut(s)	755, 1611, 1651
MaeII	ACGT	2 cut(s)	683, 1588
MaeIII	GTNAC	8 cut(s)	20, 280, 430, 810, 1006, 1183, 1324, 1646
MalI	GATC	3 cut(s)	549, 1032, 1109
MboI	GATC	3 cut(s)	547, 1030, 1107
MflI	RGATCY	1 cut(s)	1107
MhlI	GDGCHC	3 cut(s)	161, 261, 728
MluCI	AATT	8 cut(s)	331, 474, 528, 633, 857, 1149, 1248, 1432
MlyI	GAGTC	1 cut(s)	285
MmeI	TCCRAC	5 cut(s)	87, 480, 781, 1163, 1406
MroXI	GAANNNNTTC	1 cut(s)	1239
MseI	TTAA	3 cut(s)	615, 927, 998
MspA1I	CMGCKG	1 cut(s)	763
MspI	CCGG	5 cut(s)	99, 148, 161, 261, 344
MspR9I	CCNGG	3 cut(s)	99, 161, 261
Mva1269I	GAATGC	1 cut(s)	1373
MvnI	CGCG	2 cut(s)	1128, 1330
MwoI	GCNNNNNNNGC	9 cut(s)	78, 81, 353, 448, 760, 876, 1307, 1370, 1571
NciI	CCSGG	3 cut(s)	99, 161, 261
NdeII	GATC	3 cut(s)	547, 1030, 1107
NheI	GCTAGC	1 cut(s)	754
NlaIII	CATG	6 cut(s)	431, 653, 724, 874, 1322, 1463
NlaIV	GGNNCC	7 cut(s)	258, 265, 450, 726, 771, 831, 1109
NmeAIII	GCCGAG	4 cut(s)	157, 427, 806, 1609
NmuCI	GTSAC	3 cut(s)	280, 810, 1324
NsbI	TGCGCA	1 cut(s)	525
NspI	RCATGY	1 cut(s)	1322
NspV	TTCGAA	2 cut(s)	241, 1026
PagI	TCATGA	1 cut(s)	649
PciI	ACATGT	1 cut(s)	1318
PctI	GAATGC	1 cut(s)	1373
PdmI	GAANNNNTTC	1 cut(s)	1239
PfeI	GAWTC	4 cut(s)	238, 243, 944, 1100
PflMI	CCANNNNNTGG	1 cut(s)	734
PinAI	ACCGGT	1 cut(s)	147
PleI	GAGTC	1 cut(s)	284
PpsI	GAGTC	1 cut(s)	284
PpuMI	RGGWCCY	1 cut(s)	770
PscI	ACATGT	1 cut(s)	1318
PshBI	ATTAAT	1 cut(s)	927
PsiI	TTATAA	1 cut(s)	789
Psp5II	RGGWCCY	1 cut(s)	770
PspN4I	GGNNCC	7 cut(s)	258, 265, 450, 726, 771, 831, 1109
PspOMI	GGGCCC	1 cut(s)	724
PspPI	GGNCC	5 cut(s)	724, 725, 740, 770, 1427
PspPPI	RGGWCCY	1 cut(s)	770
PsrI	GAACNNNNNNTAC	2 cut(s)	1582, 1614
PstNI	CAGNNNCTG	2 cut(s)	695, 1370
PsuI	RGATCY	1 cut(s)	1107
RsaI	GTAC	5 cut(s)	152, 588, 824, 1131, 1591
RsaNI	GTAC	5 cut(s)	151, 587, 823, 1130, 1590
SalI	GTCGAC	1 cut(s)	221
SaqAI	TTAA	3 cut(s)	615, 927, 998
Sau3AI	GATC	3 cut(s)	547, 1030, 1107
Sau96I	GGNCC	5 cut(s)	724, 725, 740, 770, 1427
SchI	GAGTC	1 cut(s)	285
ScrFI	CCNGG	3 cut(s)	99, 161, 261
SduI	GDGCHC	3 cut(s)	161, 261, 728
SfaNI	GCATC	6 cut(s)	343, 406, 647, 1067, 1262, 1405
SfcI	CTRYAG	2 cut(s)	289, 744
SfuI	TTCGAA	2 cut(s)	241, 1026
SinI	GGWCC	2 cut(s)	770, 1427
SmlI	CTYRAG	2 cut(s)	539, 1486
SmoI	CTYRAG	2 cut(s)	539, 1486
Sse9I	AATT	8 cut(s)	331, 474, 528, 633, 857, 1149, 1248, 1432
SspI	AATATT	2 cut(s)	892, 1216
SspMI	CTAG	3 cut(s)	755, 1611, 1651
StyD4I	CCNGG	3 cut(s)	97, 159, 259
StyI	CCWWGG	1 cut(s)	1302
TaaI	ACNGT	8 cut(s)	142, 256, 326, 666, 1006, 1387, 1442, 1511
TaiI	ACGT	2 cut(s)	686, 1591
TaqI	TCGA	6 cut(s)	126, 222, 241, 966, 1026, 1350
TasI	AATT	8 cut(s)	331, 474, 528, 633, 857, 1149, 1248, 1432
TatI	WGTACW	2 cut(s)	586, 822
TauI	GCSGC	6 cut(s)	75, 78, 81, 84, 1421, 1551
TfiI	GAWTC	4 cut(s)	238, 243, 944, 1100
Tru1I	TTAA	3 cut(s)	615, 927, 998
Tru9I	TTAA	3 cut(s)	615, 927, 998
TscAI	CASTG	4 cut(s)	331, 696, 1065, 1371
TseFI	GTSAC	3 cut(s)	280, 810, 1324
TseI	GCWGC	6 cut(s)	442, 510, 953, 1055, 1080, 1155
Tsp45I	GTSAC	3 cut(s)	280, 810, 1324
TspDTI	ATGAA	4 cut(s)	109, 638, 855, 1281
TspGWI	ACGGA	1 cut(s)	39
TspRI	CASTG	4 cut(s)	331, 696, 1065, 1371
Van91I	CCANNNNNTGG	1 cut(s)	734
VpaK11BI	GGWCC	2 cut(s)	770, 1427
VspI	ATTAAT	1 cut(s)	927
XagI	CCTNNNNNAGG	2 cut(s)	777, 1407
XapI	RAATTY	3 cut(s)	331, 528, 857
XceI	RCATGY	1 cut(s)	1322
XmiI	GTMKAC	1 cut(s)	222
XmnI	GAANNNNTTC	1 cut(s)	1239
XspI	CTAG	3 cut(s)	755, 1611, 1651

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.